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USGS · 70261861

Observing systems, modeling, and forecasting

Abstract

Predicting harmful algal blooms (HABs) requires integrating physical, chemical, and biological data collected from observing networks and then assimilating these data into models, which are used to generate forecasts. In 2005, the Harmful Algal Research and Response: A National Environmental Science Strategy 2005-2015 (HARRNESS, 2005) made recommendations on how to improve HAB modeling and forecasting over the next decade. Key HARRNESS recommendations related to sensing, networking, and modeling HABs included: ● Support the development and validation of new and improved technologies for remote cell and toxin detection, and for modeling and forecasting, ● Improve coordination of monitoring/ and modeling efforts, both at national and regional levels, ● Improve the use of networking technologies for monitoring and modeling efforts, ● Conduct sustained time series measurements of the biotic, chemical, and physical environments impacted by HABs, ● Develop food web models on the ecosystem fate and effects of toxins, ● Develop and improve species-specific models that link to physical-biological models. Here we review HAB observing, modeling, and forecasting advances and technologies and recommend research and management priorities for the next decade and beyond. Our report encompasses sensing technologies, sensor networking and data management, models and forecasts, and the paths to operationalize forecasts. Continued improvements of deployable sensors are foundational to improving early warning indicators, models, and forecasts, which are only as good as the underlying data. Sensing technology has advanced considerably in the last decade; for example, more capable fluorometric pigment sensors can track changes in bloom biomass in real-time. Additionally, automated imaging/classifying systems to identify and quantify key harmful algal (HA) taxa are being routinely deployed. However, deployable toxin sensors are available for only some HAB toxins and continue to be identified as a critical need by researchers and managers. As more and improved sensors and technologies become available, the data quality associated with each sensor needs to be assessed. Data quality encompasses the reliability, accuracy, and uncertainty associated with sensor-generated data. These data need to be of known quality so that researchers, managers, and end-users can reliably determine if the information is appropriate for their intended applications. Many of the data quality recommendations from HARRNESS (2005) are still relevant and have been reiterated within the management community. Understanding and documenting data quality, and when applicable, standardizing best practices for sensor use, continue to be recommended.

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BibTeXRIS

Keith Bouma-Gregson, Gregory Doucette, Jennifer L. Graham, Raphael Kudela, Beth Stauffer, Clarissa Anderson, John F. Bratton, Benjamin M. Holcomb, Kate Hubbard, Tenaya Norris, Tom Stiles, Peter J. Tango, Heather Raymond, Vanessa Zubkousky. 2024-07-17. Observing systems, modeling, and forecasting. https://doi.org/10.1575/1912%2F69773

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Factors affecting benthic macroinvertebrate health in the City of Roanoke, Virginia, 2020–2023

Major waterways in the City of Roanoke (City) have failed to meet Virginia’s aquatic life designated use since 1996. Segments of the upper Roanoke River lack healthy benthic macroinvertebrate communities which prompted a total maximum daily load (TMDL) study by the Virginia Department of Environmental Quality (VDEQ) to identify the most probable stressor(s) causing the impairment. Excess fine sediment was identified as the most probable stressor impairing benthic macroinvertebrates on portions of the Roanoke River in 2006, and a watershed implementation plan published in 2016 required communities within the impaired watershed to implement projects that would reduce the load of fine sediment entering the Roanoke River. Additional benthic macroinvertebrate sampling and stream habitat assessments along the Roanoke River and Tinker Creek (a tributary to the Roanoke River that flows through the City) revealed continued impaired conditions, and subsequent stressor identification analysis was completed in 2023. Samples collected downstream of the City on the Roanoke River and Tinker Creek generally showed more impaired conditions relative to samples collected at locations upstream of the City. Based on this evaluation, sediment and sediment-bound polychlorinated biphenyls (PCBs) were identified as probable stressors while specific conductance, total nitrogen, and sediment metals were possible stressors in Tinker Creek; however, only a sediment TMDL target was identified to address impaired benthic macroinvertebrate communities. In the Roanoke River upstream of the Niagara Dam, sediment and total phosphorus were identified as probable stressors, sediment polycyclic aromatic hydrocarbons and sediment PCB were considered possible stressors; however, the TMDL target was only for total phosphorus. The City partnered with the U.S. Geological Survey (USGS) in 2016 to continuously monitor water quality and streamflow conditions on a major tributary of Tinker Creek, Lick Run, and by 2020, four similar monitoring stations were installed on the Roanoke River and Tinker Creek near the locations of benthic macroinvertebrate sampling. Monitored parameters included streamflow and/or gage height (water level), water temperature, pH, dissolved oxygen, specific conductance, and turbidity. Turbidity is a measure of the relative clarity of the water and was previously used to model suspended-sediment concentrations at the monitoring stations. The City also contracted Kirk Environmental, LLP (KE) to collect benthic macroinvertebrate samples and stream habitat assessments near the locations of the water-quality monitoring stations. Identified benthic macroinvertebrates were used to calculate the Virginia Stream Condition Index (SCI), a multi-metric index composed of eight biological attributes that represent elements of the structure and function of the benthic macroinvertebrate community that measure diversity, composition, and tolerance to pollution. Study objective: In this report, benthic macroinvertebrate samples and stream habitat assessment scores collected at four locations on the Roanoke River and Tinker Creek by KE and the VDEQ between 2020 and 2023 were compared to measured water-quality and streamflow conditions prior to sampling to evaluate patterns between benthic macroinvertebrate health, water quality, and hydrology.

Virginia