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Research about Florida

Source-linked reports with geographic coverage including Florida.

At least 73 records · Page 4Linked to original sources

Borehole geophysical time-series logging to monitor passive ISCO treatment of residual chlorinated-ethenes in a confining bed, NAS Pensacola, Florida

In-situ chemical oxidation (ISCO) is a common method to remediate chlorinated ethene contaminants in groundwater. Monitoring the effectiveness of ISCO can be hindered because of insufficient observations to assess oxidant delivery. Advantageously, potassium permanganate, one type of oxidant, provides the opportunity to use its strong electrical signal as a surrogate to track oxidant delivery using time-series borehole geophysical methods, like electromagnetic (EM) induction logging. Here we report a passive ISCO (P-ISCO) experiment, using potassium permanganate cylinders emplaced in boreholes, at a chlorinated ethene contamination site, Naval Air Station Pensacola, Florida. The contaminants are found primarily at the base of a shallow sandy aquifer in contact with an underlying silty-clay confining bed. We used results of the time-series borehole logging collected between 2017 and 2022 in 4 monitoring wells to track oxidant delivery. The EM-induction logs from the monitoring wells showed an increase in EM response primarily along the contact, likely from pooling of the oxidant, during P-ISCO treatment in 2021. Interestingly, concurrent natural gamma-ray (NGR) logging showed a decrease in NGR response at 3 of the 4 wells possibly from the formation of manganese precipitates coating sediments. The coupling of time-series logging and well-chemistry data allowed for an improved assessment of passive ISCO treatment effectiveness.

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Diamondback terrapin resource use in a seagrass-dominated coastal bay varies by life stage

Diamondback terrapins, hereafter referred to as terrapins, are the only estuarine turtle species native to North America. However, terrapins are also occasionally found in marine habitats, such as seagrass beds, and yet little is known about how they use those marine habitats. We sampled epidermis from terrapins ( Malaclemys terrapin macrospilota ) inhabiting a seagrass-dominated coastal bay in Northwest Florida and compared resource use among terrapin sexes and life-history stages using the isotopic niche and mixing models. Terrapins were generalist foragers, and their diets varied by sex and life stage, as has been reported elsewhere. Basal resource mixing models indicated the terrapin food web was based primarily on Thalassia testudinum for adult females (50.0%) and Spartina alterniflora for adult males (49.7%) and juvenile females (42.2%). Dietary mixing models indicated the adult female diet included a relatively high proportion of Thalassia testudinum (31.3%), suggesting a strong reliance on seagrass dominated prey and not necessarily large consumption of seagrass, followed by lower proportions of gastropods (26.6%) and crustaceans (19.1%). Primary diet items for juvenile females and adult males included relatively equal proportions of echinoderms, gastropods, crustaceans, ascidians, and porifera. Body and head size of terrapins may drive differences in diet, as interpreted from mixing model results. Although mangroves are expanding their range northward along the Gulf of America coast and have become established at our study site, it does not appear that terrapins are foraging within these newly established mangrove forests. Finally, the terrapin niche, particularly for adult females, may overlap with the sea turtle niche in seagrass-dominated bays. Whether sea turtles impact terrapin populations, including through direct predation, is unknown.

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Denning black bear response to anthropogenic disturbance and implications for cub survival in Florida

Wildlife research and management can be disruptive to wildlife. By advancing our understanding of the impacts of these activities, we can reduce adverse effects, improve decision-making, and enhance the outcomes of research and management. During 2017–2019, we observed the responses of denning female American black bears ( Ursus americanus ) to 3 types of routine research and management activities in Florida, USA: (1) a low-level, nonintrusive human approach near the natal den ( n H 44); (2) a high-level, intrusive human approach involving cub handling ( n H 42); and (3) a prescribed burn within 1 km of the den during the denning season ( n H 11). We measured responses (flight distance, time away, and postdisturbance denning behavior) using Global Positioning System collars programmed to record a location every 2 hours. We observed minimal response from bears to low-level human disturbances. In contrast, all bears fled after high-level human disturbances, with responses ranging from staying nearby throughout the disturbance and quickly returning to cubs, to fleeing several kilometers and abandoning cubs. On average, bears fled approximately 380 m from the den and returned to their cubs 7 hours postdisturbance. After returning, most bears relocated their cubs to a new den site, on average 125 m away. Responses to prescribed fire ranged from no measurable response and no den relocation to den site abandonment with cub mortality. Through generalized linear modeling, we found that adult female time away was positively associated with cub age. We found that annual cub survival was negatively associated with fire exposure in the den and with continued denning at a disturbed den site following high-level disturbance. In areas where bears are easily displaced from dens, these results provide insights that may improve bear research and habitat management decisions.

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Wild Burmese python nest site selection, thermogenesis, and brooding behaviors in the Greater Everglades Ecosystem

Invasive Burmese pythons ( Python bivittatus ) are extremely cryptic animals. Although their conservation status in their native range is Vulnerable, in the Greater Everglades Ecosystem (Florida, USA) they have become a dominant destructive force and usually are immediately removed whenever found. This poses a paradox where removals are occurring, yet the study and understanding of python ecology is needed to inform removal methods. An important component of life history includes the nesting season, but little is known about python nest site selection, nest brooding, thermogenesis, or hatching success in the wild. Here, we present the first complete and most detailed report of oviposition and brooding for this biologically significant time period of a female Burmese python. We describe anthropogenic nest site selection, document the extent of shivering thermogenesis, describe brooding behaviors, and provide photo-documentation of complete hatching of the largest python clutch on record.

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Shifting baselines of coral-reef species composition from the Late Pleistocene to the present in the Florida Keys

The ongoing global-scale reassembly of modern coral reefs is unprecedented compared with the observed stability of most late Quaternary reef assemblages. One notable exception is the marine isotope stage (MIS) 5e ( ca 130–116 thousand years ago [ka]) reefs in the Florida Keys, where the ubiquitous shallow-water coral, Acropora palmata , was near absent. Little is known, however, about reefs that grew during MIS5d–a ( ca 116–74 ka), between MIS5e and the Holocene. It is therefore unclear whether Florida's unique MIS5e coral assemblages represent a geologically brief anomaly or a more persistent departure from the western Atlantic coral-reef archetype. We addressed that question by reconstructing the composition of MIS5d–a reefs within 29 coral-reef cores collected throughout the Florida Keys. We then compared the relative composition of corals during MIS5d–a to existing datasets from MIS5e, Holocene and modern (1996 and 2022) reefs to evaluate how far today's reef assemblages have diverged from geological baselines. We show that although the proportion of reef frameworks built by corals was remarkably consistent ( ca 38%), species composition changed significantly through time. Acropora palmata was rare throughout MIS5, which we hypothesise was due to greater cold-temperature stress in Florida's subtropical reefs compared with the more climatically stable tropics. In contrast, the massive reef-building coral, Orbicella spp., was regionally dominant throughout the late Quaternary, but has become increasingly rare on modern reefs. By 2022, reefs in the Florida Keys were characterised by a truly novel coral assemblage dominated by Porites astreoides and Siderastrea siderea . In many ways, Florida's reefs defy the concept of a natural baseline; instead, their most persistent characteristic since the Late Pleistocene is their uniqueness. Yet, as reefs are increasingly subjected to unprecedented levels of environmental change, the exceptions to what was normal in the past could, paradoxically, provide the best geological analogues for the future.

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Interpreting a sudden population decline in a long-lived species (Malaclemys terrapin rhizophorarum)

Long-term ecological studies are critical for providing insight into population dynamics and detecting population declines, particularly for species of conservation concern. However, spatiotemporal variation and logistical challenges make the identification of sudden population declines difficult. We conducted an in-water capture-mark-recapture study of mangrove diamond-backed terrapins ( Malaclemys terrapin rhizophorarum ) within Big Sable Creek, in Everglades National Park, Florida. We used an 18-year dataset (2001 to 2019) incorporating year, sex, hurricane occurrence, and sampling effort to estimate survival using Cormack–Jolly–Seber (CJS) models in Program Mark. Annual survivorship estimates were high from 2001 to 2003 for both sexes (91%–96%) and variable from 2006 to 2014 (77%–92%). Beginning in 2015, survival estimates exhibited a steeper decline (females: 65%, males 75%), and dropped to below 36% by 2018. Because the driver of this apparent population decline is unknown, we created a population projection matrix and used model-estimated annual survival to simulate annual terrapin population size. We then generated competing scenarios of low survival at various age classes to attempt to reproduce a simulated decline mirroring what we observed from our capture data. A scenario of low adult survival (75%–85%) from 2012 to 2018, possibly in conjunction with no reproduction after 2010, provides estimates of abundance that appear to match simulated annual population size and may indicate that adult emigration/human removal or a drastic drop in recruitment could be responsible for the apparent decline in survival. We explore reasons for this apparent decline and highlight difficulties common to long-term studies that may influence how declines are interpreted.

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A comprehensive sulfate and DOM framework to assess methylmercury formation and risk in subtropical wetlands

Wetlands play a vital role in contaminant cycling and uptake. Understanding how sulfate (SO 4 2‒ ) influences the conversion of inorganic mercury (Hg(II)) to toxic methylmercury (MeHg) is critical for predicting wetland responses to land use and climate change. Here, we sampled surface and pore waters across SO 4 2‒ gradients in three freshwater Everglades wetlands to assess linkages between SO 4 2‒ , MeHg, dissolved organic matter (DOM), and inorganic sulfide (S(‒II)). Increasing SO 4 2‒ concentrations increase S(‒II) and DOM concentrations and DOM aromaticity. MeHg concentration show a unimodal response to surface water SO 4 2‒ , which reflect high Hg(II) methylation at low-to-intermediate SO 4 2‒ concentration (2-12 mg/L) and low Hg(II) methylation at higher SO 4 2‒ concentrations ( > 12 mg/L). MeHg concentrations in surface waters correlate positively with MeHg concentrations in prey fish. The coherent biogeochemical relationships between SO 4 2‒ and MeHg concentrations and biologic uptake improve MeHg risk assessment for aquatic food webs and are globally relevant due to anthropogenic and climate-driven increases in SO 4 2‒ .

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Discovery of late Holocene-aged Acropora palmata reefs in Dry Tortugas National Park, Florida, USA: The past as a key to the future?

Emblematic of global coral-reef ecosystem decline, the coral ecosystem-engineer Acropora palmata is now rare throughout much of the western Atlantic. Understanding when and where this foundation species occurred during the past can provide information about the environmental limits defining its distribution through space and time. In this paper, the present, historical and newly dated geological records of A. palmata are compared to reveal novel insights into the environmental constraints on its occurrence in Dry Tortugas National Park, a subtropical reef system at the south-western terminus of the Florida reef tract. Although past geological investigation found little evidence of the species in the park, a single, moderately sized A. palmata reef existed throughout historical times (1881 Common Era [CE] to present day; ‘historical population’, termed herein). Over the last 140 years, repeated population declines occurred with little to no recovery, culminating in the extirpation of A. palmata from the area during the 2023–2024 CE global coral bleaching event. Reported here for the first time is a significant record of Late Holocene A. palmata populations that existed from ca 4500 to 375 years before present (‘Late Holocene population,’ termed herein) in three broadly distributed areas of the shallow Dry Tortugas platform. This discovery challenges previous assumptions regarding the species' limited contribution to reef development in the area by providing data that extend the known spatial and stratigraphic extent of Holocene populations in this location. It is posited that, although the Late Holocene climate largely suppressed regional reef development, the new records provide evidence for centennial-scale periods of more favourable and stable climate that allowed for short-term expansions of A. palmata populations in the Dry Tortugas. In conclusion, the species' prospects for future success in this and other subtropical location

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Object detection-assisted workflow facilitates cryptic snake monitoring

Camera traps are an important tool used to study rare and cryptic animals, including snakes. Time-lapse photography can be particularly useful for studying snakes that often fail to trigger a camera's infrared motion sensor due to their ectothermic nature. However, the large datasets produced by time-lapse photography require labor-intensive classification, limiting their use in large-scale studies. While many artificial intelligence-based object detection models are effective at identifying mammals in images, their ability to detect snakes is unproven. Here, we used camera data to evaluate the efficacy of an object detection model to rapidly and accurately detect snakes. We classified images manually to the species level and compared this with a hybrid review workflow where the model removed blank images followed by a manual review. Using a ≥0.05 model confidence threshold, our hybrid review workflow correctly identified 94.5% of blank images, completed image classification 6× faster, and detected large (>66 cm) snakes as well as manual review. Conversely, the hybrid review method often failed to detect all instances of a snake in a string of images and detected fewer small (<66 cm) snakes than manual review. However, most relevant ecological information requires only a single detection in a sequence of images, and study design changes could likely improve the detection of smaller snakes. Our findings suggest that an object detection-assisted hybrid workflow can greatly reduce time spent manually classifying data-heavy time-lapse snake studies and facilitate ecological monitoring for large snakes.

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Acute heat stress and the extirpation of a threatened coral species from a remote, subtropical reef system

The ecological significance of the reef-building elkhorn coral, Acropora palmata , is threatened by heat-stress-induced mortality. The intensity and duration of the ocean heatwave affecting Dry Tortugas National Park in the summer of 2023 was historically unprecedented in its early timing and maximum temperatures reached and resulted in 100% A. palmata mortality. To understand the lethality of this event, we examined temperature data measured by in situ data loggers and estimated from satellites (National Oceanic and Atmospheric Administration’s Coral Reef Watch) to investigate the timing of peak ocean temperatures and coral mortality. The in situ dataset revealed warmer water temperatures during the heatwave than those reported from the satellites, and the difference between the datasets was significantly pronounced during the summer. Our results support that, at least for this subtropical population, A. palmata may have an upper-threshold temperature that caused lethality faster than expected from the gradual accumulation of heat stress.

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Aggregated space use by soft-released translocated Gopher Tortoises (Gopherus polyphemus)

Translocated herpetofauna can exhibit irregular space use and movement patterns when compared with resident conspecifics. In Florida, USA, Gopher Tortoises ( Gopherus polyphemus ) are translocated throughout the state to mitigate habitat loss due to development. The postrelease space use of translocated Gopher Tortoises within soft-release pens can affect population dynamics and population monitoring efficacy, and understanding spatial patterns can aid wildlife managers with population management. We used a combination of time-lapse cameras, animal tracking devices, and burrow distribution surveys to investigate translocated tortoise space use at Eglin Air Force Base, Florida, where tortoises have been translocated since 2015. We investigated 10 soft-release pens that varied in size (4–41 ha) and shape (due to landscape configuration and existing infrastructure). Time-lapse cameras and burrow distribution surveys showed that tortoises used habitat within 20 m of soft-release pens (silt fences) significantly more than the interior of pens. In most pens, the selection of pen-edge habitat resulted in a clustering effect that lessened upon subsequent surveys, after fences were removed. Additionally, our tracking data showed mixed evidence for clustering, where three of the seven tortoises used edge area significantly more than the interior of pens. Such clustering can affect the efficacy of population survey methods while potentially having negative impacts on the health of translocatees by increasing local density.

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Social composition of soft‐release groups is correlated with survival of translocated gopher tortoises

The social structure of translocated animal populations can have important effects on the survival and reproduction of translocated individuals for both solitary and social species. The gopher tortoise ( Gopherus polyphemus ) is a reptile of conservation concern that is currently experiencing high levels of mitigation translocation in Florida, USA. Individuals live in aggregations of burrows with frequent agonistic, courtship, and burrow-sharing interactions between residents. Given that exposure to many unfamiliar individuals may increase the frequency of aggressive interactions and social stress following translocation, we predicted that tortoises with greater numbers of familiar individuals co-translocated from the same origin site would have higher survival after translocation. To test this, we updated a recently published survival analysis of 2,822 translocated tortoises and 502 identified carcasses from a translocation site in the western Florida panhandle from 2006–2022. After controlling for simultaneous effects of soft-release enclosure identity, release season, release density, region of origin, sex, and size, adding the number of potentially familiar individuals improved model fit and showed increasing the number of familiars reduced the probability of being found dead. This effect was modulated by release density, being apparent only when density was high, suggesting a role for social interactions. This effect was also present only in the first few years after release, prior to the removal of soft-release enclosures preventing dispersal, and was similar in magnitude to previously identified effects of density, release season, and region of origin. We suggest that this effect may result from reduced aggressive interactions or social stress for tortoises with a greater number of familiar individuals in their release enclosures but cannot rule out the possibility of reduced novel pathogen exposure for individuals released with a greater number of individuals from the same source site or other factors that may be confounded with the size of translocated groups. Designing and implementing mitigation translocations to account for social composition of gopher tortoise groups could improve survival in release enclosures.

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Linking environmental variability to long-term demographic change of an endangered species using integrated population models

Understanding how species populations change with environmental conditions is important for implementing effective habitat management and conservation strategies. Challenges to evaluating population-level responses to environmental conditions arise when data are sparse or not spatiotemporally aligned, especially for at-risk species with small, declining numbers. We synthesized 30 years (1992–2021) of three partially aligned data sets to build a Bayesian integrated population model (IPM) and evaluate demographic and environmental drivers of growth rates for six separately managed ‘subpopulations’ (A–F) of the federally endangered Cape Sable seaside sparrow endemic to the Florida Everglades. We found that juvenile survival peaked at inundation periods (hydroperiods) around 100–220 days and dropped sharply outside those values, while adult survival increased with longer periods of water depth <20 cm, but not with longer periods of water depth >20 cm. Fecundity increased when water depths were more stable, more area was dry, intervals between fires were longer and less area was burned. Changes in population growth rates tended to occur in years that juvenile and adult survival were associated with hydroperiod, especially in the two largest subpopulations B and E. Population growth rates were also associated with hydrologic conditions during the breeding season and fire dynamics through changes in fecundity, most notably in the smaller subpopulations A, C/F and D. Synthesis and applications . Our IPM represents the first long-term population analysis of the Cape Sable seaside sparrow connecting demographic processes to environmental factors. Our results suggest that sustaining periods of shallow water year-round may enhance Cape Sable seaside sparrow survival and population growth. Also, limiting water depth variability and maintaining dry conditions during the breeding season and inhibiting fires in consecutive years may increase fecundity and population growth. Identifying the mechanistic links between environmental and population dynamics could inform how species are expected to respond to management decisions and anticipated ecosystem changes.

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Continuous stream discharge, salinity, and associated data collected in the lower St. Johns River and its tributaries, Florida, 2022

The U.S. Army Corps of Engineers, Jacksonville District, deepened the St. Johns River channel in Jacksonville, Florida, to accommodate larger, fully loaded cargo vessels. The U.S. Geological Survey (USGS), in cooperation with the U.S. Army Corps of Engineers, monitored stage, discharge, and (or) water temperature and salinity at 26 continuous data collection sites in the St. Johns River and its tributaries. This report contains information collected during the 2022 water year, from October 2021 to September 2022. Data at each site were compared for the length of the project and on a yearly basis to show the annual variability of discharge and salinity. The countywide annual rainfall for the 2022 water year was above the average yearly rainfall in four of the five counties. Annual mean discharge at 8 of the 10 tributary monitoring sites was lower for the 2022 water year than for the 2021 water year, and the annual mean flow at Broward River below Biscayne Boulevard near Jacksonville, Florida (USGS site number 02246751), was the lowest recorded at that site over the 7 years of data collection. The annual mean discharge for each of the main-stem sites was lower for the 2022 water year than for the 2021 water year. Among the tributary sites, annual mean salinity was highest at Clapboard Creek above Buckhorn Bluff near Jacksonville, Fla. (USGS site number 302657081312400), the site closest to the Atlantic Ocean, and was lowest at Durbin Creek near Fruit Cove, Fla. (USGS site number 022462002), the site farthest from the ocean, for all years. Annual mean salinity data from the main-stem sites indicate that salinity decreased with distance upstream from the ocean, which was expected. Annual mean salinity at all monitoring locations was higher for the 2022 water year than the 2021 water year, except at St. Johns River at Buffalo Bluff near Satsuma, Fla. (USGS site number 02244040) and St. Johns River at Dancy Point near Spuds, Fla. (USGS site number 294213081345300), which remained the same. St. Johns River Shands Bridge near Green Cove Springs, Fla. (USGS site number 295856081372301) and Durbin Creek near Fruit Cove, Fla. (USGS site number 022462002) had the highest annual mean salinities at their respective sites since data collection began.

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Snapshots of mid-to-late Holocene sea-surface temperature variability from a subtropical western Atlantic coral reef

Large-scale Holocene climate reconstructions rely heavily on extratropical proxy records. Coral-based temperature reconstructions from the tropical and subtropical oceans therefore fill a critical spatial and temporal data gap, allowing for reconstruction of seasonally resolved temperature variability. We present five new, monthly-resolved sea-surface temperature (SST) reconstructions (between 39 and 57 years in length) from 2 to 7 thousand years ago (ka) based on the strontium-to‑calcium ratio (Sr/Ca) of Orbicella faveolata corals from subtropical reefs in south Florida. Modern calibrations between O. faveolata Sr/Ca and in situ SST from the region allow us to directly compare the mean and variability of SSTs since the mid-Holocene. In contrast to the low climate variability observed in more tropical areas of the western Atlantic during the Holocene, our records from subtropical south Florida exhibit pronounced changes in mean SST and variability. Our records suggest that mid-Holocene SSTs in the Florida Keys were highly variable, with relatively cooler winters driving a cooler mean SST at ∼6.7 ka (23.7 ± 0.6°C at 6.7 ka and 25.0 ± 0.5°C at 6.6 ka), and relatively warmer summers and more variable temperatures by 5.8 ka (27.1 ± 0.4°C, seasonality of 8.7°C). We also analyzed stable oxygen isotopes in two of our corals and those data support our Sr/Ca-based estimate of climatic warming between 6.6 ka and 5.8 ka (−3.6‰ and − 3.9‰). Both winter and summer temperatures were significantly cooler than the other mid-to-late Holocene snapshots at 3.6 ka (21.2 ± 0.5°C) and SST warmed but remained highly variable at 2.6 ka (25.0 ± 0.6°C, seasonality of 7.9°C). These centennial-scale changes in climate variability potentially contributed to the regional shutdown of reef accretion by the late Holocene. Our reconstructions provide a proof-of-concept study that highlights the value of coral-based SST records from highly sensitive, subtropical locations for understanding Holocene climate on seasonal to centennial timescales.

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Detection of the Diadema antillarum scuticociliatosis Philaster clade on sympatric metazoa, plankton, and abiotic surfaces and assessment for its potential reemergence

A ciliate belonging to the Diadema antillarum scuticociliatosis (DaSc)-associated Philaster clade (DaScPc) caused catastrophic long-spined urchin mass mortality in spring and summer of 2022. The ciliate can be grown in culture in both the presence and absence of D. antillarum tissues, suggesting that it may persist outside its host by consuming microorganisms or dissolved organic nutrients. We hypothesized that DaScPc was present outside its host during and after mass mortality and absent prior to 2022. We examined DaScPc in DNA extracted from 500 swabs of sym- patric metazoa and abiotic surfaces, and plankton samples, collected at 35 sites in the Caribbean in 2022 and 2023. DaScPc was detected on corals, turf algae, and a sponge, predominantly at sites with active or prior DaSc. We examined whether it was present prior to 2022 by surveying extracted DNA from Caribbean corals and water collected near corals by PCR and by mining publicly available transcriptomes and metagenomes for DaScPc rRNAs. These efforts yielded no DaScPc genes. We further hypothesized that DaScPc may recruit to the specific corals detected in field surveys, and that these may then infect naïve hosts. A mesocosm experiment to test DaScPc recruitment suggested that, while it recruited to corals, it did so inconsistently between coral species. Incubation of corals that recruited DaScPc with naïve urchins yielded inconclusive results since urchins died without characteristic DaSc signs. Overall, our results suggest that DaScPc may occur outside its urchin host, and that it may have been absent in the region prior to 2022.

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Coral reef restoration can reduce coastal contamination and pollution hazards

Coral reef restoration can reduce the wave-driven flooding for coastal communities. However, this protection has yet to be assessed in terms of the reduced risk of flood-driven environmental contamination. Here we provide the first high-resolution valuation of the reduction of flood-related land-based environmental pollution provided by potential coral reef restoration. Along Florida’s 460 km-long coral reef-fringed coastline, coral reef restoration could reduce the risk of sewage and petrochemical contamination by preventing the flooding of petroleum storage tank systems (-9%), onsite sewage treatment and disposal systems (-4%), and wastewater treatment plants (-10%). The present value of critical infrastructure protection and contamination prevention benefits provided by coral reef restoration is $3,413,503, with some areas exceeding $1,500,000/km. Annually, 48,403 U.S. gal of petrochemicals, 10,404 GPD of wastewater treatment capacity, equivalent to $281,435, could be protected from flooding, demonstrating that coral reef restoration can provide environmental risk reduction and previously undocumented additional socioeconomic benefits.

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