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Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

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At least 1,603 records · Page 89Linked to original sources
USGS2025

Hair growth rate estimation in North American ursids

The feeding ecology of wildlife populations has important implications for individual health, population productivity and distribution patterns. For ursids (bears), food resources and feeding behaviour primarily affect population dynamics via effects on cub production and survival. Much of what is known about the feeding ecology of bears is based on analyses of tissues collected from capture-based research efforts, harvested animals or non-invasive approaches. However, inference about diet from hair has been limited by a lack of quantitative data on the timing of the moult and hair growth rates. We conducted a study to develop and test two methods of quantifying hair growth rates of three species in the family Ursidae ( n = 1 polar bear, Ursus maritimus ; n = 3 black bears, Ursus americanus ; n = 3 grizzly bears, Ursus arctos horribilis ). We implemented visual and biochemical approaches, proven safe for humans and other mammals, in a zoo setting. These methods relied on voluntary bear behaviours trained using positive reinforcement. The two methods were: (i) applying a small patch of hair dye (or bleach) on the rump or foreleg, and (ii) feeding an isotopically labelled amino acid (glycine) capsule that ‘marks’ time at a particular location as it is incorporated within the hair. We collected hair at regular intervals (every 1–2 weeks) for five months from body locations on the bear consistent with commonly sampled collection points in wild-caught bears. We found that both methods effectively identified periods of hair growth and detected individual and seasonal variation in hair growth rates. Average guard hair growth rates ranged between 0.10 and 1.05 mm day −1 across the three species. This study provides the first step for developing a foundation for incorporating seasonality in wild-collected bear hair samples by assessing growth over an annual cycle.

Conservation Physiology↗
USGS2025

The abiotic background as a central component of a Sample Safety Assessment Protocol for Mars Sample Return

Martian rock and regolith samples are being collected and cached by NASA’s Perseverance rover, with the goal of returning them to Earth as soon as the mid-2030s. Upon return, samples would be housed in a sample receiving facility under biological containment to prevent exposing Earth’s biosphere to any potential biohazards that might be present. Samples could be released from high containment for scientific investigations if they are found to be safe or are sterilized. The Sample Safety Assessment Protocol Tiger Team (SSAP-TT) was convened by the Sample Receiving Project between August 2023 and August 2024 and tasked with the development of a Sample Safety Assessment Protocol (SSAP). The result of this work is a proposed three-step protocol, supported by Bayesian statistical hypothesis testing, to assess the risk as to whether returned samples contain modern martian biology that could represent a biohazard. The proposed protocol outlines procedures to determine whether the samples could be safely released from high containment without sterilization or require a “hold and review” step. This article presents the central concept of the SSAP approach—comparing returned samples to the abiotic baseline. Organic molecules, which exist throughout the solar system, can have either biotic or abiotic origins. However, biotically produced organic molecules exhibit distinct complexity, distribution, and abundance characteristics that differentiate them from those formed through abiotic chemistry. The proposed protocol would examine the organic inventory of returned samples by using multiple techniques, including morphological and spectral assessments, to determine whether any signals exceed the abiotic baseline; that is, whether the organic molecular inventory could be explained solely by abiotic chemical synthesis. This approach provides a rigorous, yet feasible, safety assessment protocol by using modern techniques while minimizing sample consumption. We also identify key areas for future research and development, which include detection limits and further characterization of the martian abiotic background.

Astrobiology↗
USGS2025

Planning considerations related to contamination control for the return and analysis of Martian samples

The joint National Aeronautics and Space Administration and European Space Agency Mars Sample Return (MSR) Campaign is a proposed multi-mission effort to bring selected geological samples from Mars to Earth for the purpose of scientific investigation. Significant parts of these investigations could be affected by Earth-sourced contamination that is either misinterpreted as having a martian origin or that masks a martian signal. The Mars 2020 Perseverance rover implemented strict contamination control requirements to limit contamination of the samples during sample collection. Contamination control and contamination knowledge requirements have not yet been established for the samples after they arrive on Earth. The MSR Sample Receiving Facility (SRF) Contamination Panel (SCP) was tasked with defining the terrestrial biological, organic, and inorganic contamination limits for martian samples during their residence inside the SRF. To reach our recommendations, the SCP studied (i) the previously proposed limits and rationale of the Organic Contamination Panel, (ii) cleanliness levels achieved for sampling hardware by the M2020 mission, (iii) recent improvements in analytical technology and detection limits, (iv) updated information regarding the organic content of martian samples ( e.g. , from the Sample Analysis at Mars instrument on the Curiosity rover and laboratory analyses of martian meteorites), and (v) information about the composition and geologic context of samples being collected by the Perseverance rover for return to Earth.

Astrobiology↗
USGS2025

Sample Science Traceability Matrix (SSTM) for Perseverance’s Mars sample return collection

The Mars Sample Return (MSR) Campaign aims to retrieve a set of carefully selected and documented samples collected by NASA’s Perseverance rover in and around Jezero Crater on Mars and deliver this set to Earth for comprehensive laboratory analyses. To emphasize the immense scientific return of this unique collection, this work presents a Sample Science Traceability Matrix (SSTM), a systematic framework that aligns each sample with the MSR campaign’s defined science objectives, subobjectives, and critical research questions. The SSTM explicitly connects prioritized goals—including geologic history, astrobiology, planetary evolution, and human exploration science—to each of the individual samples gathered in and around Jezero Crater on Mars. This matrix offers a structured, quantitative method to assess each sample’s capacity to address key scientific questions, while highlighting synergies across the sample suite and showcasing the overall value of the collection. The SSTM provides a valuable tool for guiding future sample analyses and identifying the most impactful samples that could be collected in the future to complete the set collected by the Mars 2020 mission. It also supports the next phase of Mars sample science and informs strategies for future Mars exploration missions.

Astrobiology↗
USGS2025

High frequency and region-scale simulations of large (Mw7+) earthquakes on the southern Whidbey Island fault, Washington, USA

We simulate ground shaking in western Washington State from hypothetical M w 7.0–7.5 earthquakes on the southern Whidbey Island fault (SWIF). Ground motions are modeled considering kinematic source distributions on a complex fault plane, a 3D seismic velocity model, and region‐specific soil velocity models. We run simulations with varying model resolutions, including regional‐scale simulations with a maximum‐modeled frequency of ∼1 Hz and local‐scale simulations with a maximum‐modeled frequency of ∼2.5 Hz. Additional local‐scale simulations are run considering high‐resolution surface topography. We explore how source parameters (i.e., magnitude, hypocenter location, and dip direction) and 3D velocity structure impact peak shaking intensity and its variability. In particular, we find that earthquakes on the SWIF would likely produce strong shaking throughout the populated Puget Lowland, including in the cities of Everett, Seattle, Bellevue, and Tacoma, Washington. Simulated short‐period ( T ≤ 2 s) spectral accelerations are strong throughout the Puget Lowland, and long‐period shaking ( T ≥ 5 s) is strong in the deep regional sedimentary basins, especially the Everett and Seattle basins. Source parameters strongly influence intra‐ and interevent variability in response, primarily through changes in source and site geometry, as well as rupture directivity. We also note a potential coupling between rupture directivity and basin effects, wherein directivity pulses are seemingly guided through the region’s deep, interconnected sedimentary basins. Overall, this work highlights the impacts of 3D source, path, and site effects on seismic hazard in the U.S. Pacific Northwest and substantially expands the catalog of simulated ground motions for Puget Sound area crustal faults.

Washington↗
USGS2025

Invasive wild pig movement and space use in a mixed-use forest landscape, South Carolina

Invasive wild pigs ( Sus scrofa ) pose considerable ecological and economic challenges across their introduced range, and understanding their spatial ecology is critical for management. This research and accompanying dataset represents adult wild pig movement in South Carolina, United States based on 16 individuals collared in 2023-2024. Using hourly GPS collar data for 6 males and 5 females, we calculated autocorrelated kernel density estimates (AKDEs) and monthly kernel density estimates (KDEs) to characterize space use. Individual pigs had an average hourly step length of 83 m and average net displacement of 930 m. On average, pigs used 2.32 km 2 monthly, while they used 2.95 km 2 over their entire tracked period (mean = 111 days). This work aims to support management actions and future research on invasive wild pigs.

South Carolina↗
USGS2025

Noble and base metal distribution and processes affecting ore tenors in the disrupted lower stratigraphy of the Stillwater Complex, USA

Exploration continues for contact-style Ni-Cu sulfide and chromitite-associated PGE mineralization in ultramafic rocks of the Stillwater Complex. At the Iron and Chrome Mountain areas, massive sulfides occur along the complex’s footwall contact and anomalous concentrations of PGE+Au are associated with the three lowermost chromitite seams. Southeast of Chrome Mountain, magmatic layering is highly disrupted by the presence of faults, magmatic breccias, serpentinized discordant dunites, pyroxenite pegmatoids, and disaggregated chromitite seams. The bulk rock chemistry, sulfide chemistry, and noble metal mineralogy of samples from this area were examined to determine the deportment of PGE and processes that led to enrichments in PGE, Au, Cu, Co and Ni. Results show that a sulfide liquid was the principal collector of PGE. If sulfide liquid was initially deposited with chromite, it was disaggregated or redistributed by subsequent melt or fluid infiltration, which may have resulted in the offset of peak PGE(+Cu, Ni) from peak Cr 2 O 3 concentrations, and upgraded PGE tenors. Upon cooling, PGE exsolved from sulfides to form discrete bismuth tellurides, arsenides, arsenic sulfides, antimonides, and alloys, commonly along the margins of sulfide globules. Calculated metal tenors are highest in the disseminated sulfides southwest of Chrome Mountain, whereas massive and net-textured sulfides near the Iron Mountain-Camp zone represent monosulfide solid solution cumulates. At progressively shallower levels, higher metal tenors combined with lower S/Se ratios are consistent with increasing R-factors from 100 to 100,000. Serpentinization and talc-tremolite alteration resulted in S loss through partial replacement of sulfides by secondary silicate+carbonate+magnetite+sulfide assemblages, further upgrading Ni-Cu-PGE tenors. The present work shows that processes responsible for the disruption of magmatic layering and post-magmatic fluid alteration along the intrusion’s lower contact led to noble and base metal enrichments.

Montana↗
USGS2025

Near-real-time geochemical monitoring of Hawaiian volcanoes using energy dispersive X-ray fluorescence (EDXRF)

Syn-eruption geochemical monitoring during volcanic activity is an important component of integrated volcanic monitoring. Volcanoes on the Island of Hawai‘i are primarily monitored by the U.S. Geological Survey’s Hawaiian Volcano Observatory using instrumental networks, field surveys, satellite observations, and petrologic monitoring. In collaboration with the University of Hawaiʻi at Hilo, an important component of this monitoring is near-real-time (generally within 24 h of sample collection) bulk-rock geochemistry using benchtop energy-dispersive X-ray fluorescence (EDXRF). Bulk-rock geochemistry, coupled with additional petrologic and geophysical analyses, are used to track eruption dynamics to help facilitate identification and understanding of changes that signal the onset of potentially hazardous activity. In this paper, we present EDXRF methodology for bulk-rock analysis used to evaluate the 2018 Kīlauea and 2022 Mauna Loa eruptions and compare this technique to other geochemical methods. Syn-eruption geochemical monitoring using EDXRF provides reliable quantitative data that is important for understanding eruption dynamics. Critical to this process are calibrating the instrument for analysis over the same range of compositions expected during volcanic activity, compiling a relevant database from past eruptions on the same instrument for comparison, and having the physical infrastructure and trained personnel to complete the analyses in a timely fashion. In addition to the scientific goals of petrologic monitoring, near-real-time geochemical analysis in Hawaii provides important information about the nature of on-going eruptions and informs decision-makers and the public about associated evolving hazards.

Hawaii↗
USGS2025

Longer exposure to warm water increases subsequent thermal tolerance of brook trout in cold water: Acclimation timing and physiology

Climate change has resulted in increased incidence and variability of warming episodes in cold-water streams that support salmonids. The capacity to acclimate to warm temperatures may allow cold-water fish to persist in spite of changing thermal regimes, but accurately predicting fish performance under fluctuating stream temperatures also requires understanding re-acclimation to cool water, which is less well understood. We tested how thermal acclimation to warm temperatures and re-acclimation to cool water affected thermal tolerance and physiological endpoints in juvenile brook trout ( Salvelinus fontinalis) . We show that an initial thermal exposure (22°C, ΔT = 7°C) of 3, 7 and 14 days (but not 1 day) improved critical thermal maximum (CT max ) after a 14-day re-acclimation to cooler temperatures (15°C). Fish growth during the re-acclimation period decreased with increasing duration of initial thermal exposure (22°C). Physiological parameters associated with thermal acclimation (cortisol, glucose, haematocrit and haemoglobin) were lower at 15°C re-acclimation temperature than at the initial thermal treatment (22°C) and in some cases, lower than the 15°C control. Muscle HSP70 protein increased early (1 day) as part of the warm acclimation process and remained elevated at lower levels for up to 14 days. During re-acclimation to 15°C, HSP70 decreased relative to initial measures at 22°C. Fish exposed to the longest thermal treatment (22°C for 14 days) maintained elevated CT max after 30 days of re-acclimation to 15°C without observed differences in the measured physiological endpoints but returned to control levels after 42 days at 15°C. This work shows that high-temperature acclimation effects in brook trout are retained for up to 30 days following re-acclimation to cool temperatures, and that isolated warming events may be expected to temporarily enhance thermal tolerance in subsequent thermal challenges.

Conservation Physiology↗
USGS2025

The role of ecology in allopatric speciation of darters in the Central Highlands, USA

Allopatric speciation is the predominant mode of speciation in riverine fishes. However, the relative importance of genetic drift versus natural selection in the allopatric speciation of these fishes remain uncertain. Here, we present a case study that demonstrates the role of ecology in the diversification of a group of imperiled freshwater fishes from the central United States. We integrate a phylogenomic dataset with analyses of streamwise distance, environmental variables, meristic and morphological traits, and diet to investigate the ecological context and outcomes of allopatric speciation within a species complex comprising the Slenderhead Darter Percina phoxocephala (Nelson), Ouachita Darter Percina brucethompsoni (Robison, Cashner, and Near), and Longnose Darter Percina nasuta (Bailey). We find that two of the species traditionally delimited based on disparity in snout length, P. phoxocephala and P. nasuta , are polyphyletic, revealing three instances of the parallel evolution of snout length disparity. We propose a revised taxonomy including the delimitation of six new species based on disparity in phenotypic traits and phylogenomic analyses. We find that morphological differences are not correlated with genetic divergence but are congruent with variations in diet and environmental niches, suggesting a role for ecological factors in allopatric speciation of riverine fishes.

Arkansas, Kansas, Missouri, Oklahoma↗
USGS2025

Viral outbreak dynamics and evolution in wildlife at the interface with humans

In this study, we used a multi-faceted approach to understand patterns of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission and persistence in a wild white-tailed deer ( Odocoileus virginianus ) population. Serology data indicated transmission of SARS-CoV-2 and persistence during the seven-month sampling period. Traditional disease modelling based on deer-to-deer transmission indicated relatively low prevalence with an R 0 of 1.9 and recovery period of 7 days; however, individual-based modelling informed by GPS tracked-movement data captured a potential transmission event. Phylogenetic analyses revealed a recurring pattern of divergent groups of deer-derived sequences with human-derived sequences falling close to each deer-derived cluster. Further, human-derived sequences were frequently sampled months prior to the deer-derived sequences, indicating repeated human to deer spillover. Using multiple types of data as well as both fine and broad scale analyses, we have characterized a pattern of localized outbreaks of SARS-CoV-2 within white-tailed deer populations that are likely recurring due to frequent spillover events. Our results suggest that while deer-to-deer transmission occurs over small spatiotemporal scales, SARS-CoV-2 persistence over longer periods and across larger regions is likely driven by repeated spillover from human populations.

Pennsylvania↗
USGS2025

Aggregating three sources of long-term trends of swallows and martins to identify priority conservation areas in the Great Lakes region

1. Long-term monitoring of bird populations across scales is important in evaluating conservation targets and creating effective conservation strategies. For nearly six decades, the Breeding Bird Survey (BBS) has served as the primary broad-scaled source of relative abundance trends of swallows and martins in North America. Recently, however, it has become possible to obtain breeding population trends using semi-structured eBird community science data. Moreover, weather surveil-lance radar data of swallow and martin roosting populations yield a third complementary source of trend information. 2. Using results from these three approaches, we propose a novel method of spatially combining estimates of percent change per year into a probability of directional agreement and/or disagreement that describes (1) the direction of the trend within a given region, (2) the amount of evidence associated with the estimate and (3) how much uncertainty surrounds it. We focus our efforts on an area of high Hirundinidae concentration in the North American Great Lakes region and predict trends from 2012 to 2022. 3. We found a high probability of agreement between all three sources about ob-served declines in swallow and martin trends in the region surrounding Lake Ontario and to the west of Lake Michigan. Focusing future research on these regions could improve our understanding of these declines and help build more targeted conservation initiatives. 4. Synthesis and applications. Our data integration methodology allows managers to identify regions that accumulate evidence of concerning trends across multiple wildlife monitoring schemes. These regions can thus be prioritized in conservation and management efforts. This approach can be generalized to other sources of long-term monitoring data of different species, at different stages of their annual cycle, in any geographic location.

Great Lakes region↗
USGS2025

Getting ahead of the crises: Developing an avian malaria disease management plan for Hawaiian forest birds

Avian malaria is an existential threat to a majority of native Hawaiian forest birds. Climate change is facilitating the spread of malaria to historically disease-free areas, and despite the risk of native Hawaiian forest bird extinctions from malaria outbreaks, no comprehensive disease management plans exist for forest bird conservation areas. Hakalau Forest National Wildlife Refuge, Hawai‘i, supports a thriving bird community in a historically disease-free area that is now vulnerable to malaria incursion. Drawing on the expertise of land managers and research scientists, we developed an approach that could be used to proactively address the risk of expanding malaria into the Refuge. The plan lays out a multi-level approach that includes options for monitoring and management actions depending on defined threat levels: Vigilant, High Alert, Disease Outbreak, and Crisis levels. Initial Vigilant and High Alert levels monitor bird populations, climate conditions, and mosquito occurrence for signs of possible disease outbreaks, with higher levels shifting toward more direct management responses. While specific actions will change as new tools become available, the proactive approach can help Refuge managers better respond to changing malaria levels in the future and provide a model for managing disease here in Hawai‘i and elsewhere.

Hawaii↗
USGS2025

Gas chemistry and isotope data for volcano monitoring at the Lassen Volcanic Center, Lassen Volcanic National Park

This report presents chemical and isotopic compositions of volcanic gases collected from thermal areas within Lassen Volcanic National Park in northern California from 1974 through 2019. As the southernmost volcano in the Cascade Range and designated a very-high-threat volcano by the U.S. Geological Survey, the Lassen Volcanic Center (LVC) requires consistent monitoring to assess potential volcanic hazards. In 2014, the California Volcano Observatory established a gas geochemical monitoring program at LVC to provide baseline data to evaluate future changes.</p> Results demonstrate consistent spatial patterns in bulk gas chemistry that support a two-circulation-cell hydrothermal model previously established for LVC. Gas samples from circulation cell 1 thermal areas have higher helium isotope ratios (6.59–7.50 times the air value) than those from circulation cell 2 (5.86–6.52 times the air value), indicating a stronger magmatic signature. The Sulphur Works and Pilot Pinnacle thermal areas within circulation cell 1 consistently emit gases with the highest magmatic helium contents, suggesting gas at these areas best represents conditions in the underlying volcanic system. A slight decrease in helium isotope values since 1974 may indicate progressive dilution of magmatic helium-3 (3He) by radiogenic helium-4 (4He) in the absence of recent magma intrusion. Carbon isotope compositions of carbon dioxide across all thermal areas are relatively uniform (−9.7–−7.3 per mil), falling within the range observed at other Cascade Range volcanoes. Based on gas geochemical characteristics and site accessibility, the Sulphur Works and Pilot Pinnacle thermal areas represent optimal targets for continued monitoring of the LVC magmatic-hydrothermal system. This study includes the most comprehensive helium isotope dataset collected at LVC currently available and establishes critical baseline data for future volcanic monitoring efforts.</p>

Open-File Report↗
USGS2025

Interaction strength and harvest intensity mediate predator–prey dynamics on coral reefs

Understanding predator–prey relationships is fundamental to our knowledge of the stability and resilience of ecological systems. These dynamics are shaped by both ecological factors, like interaction strength, and anthropogenic factors, like harvest intensity, which can have large-scale implications for community structure. However, few studies have focused on the combined impact of these effects and their contribution to phenomena like prey release within two-species frameworks. In this study, we investigate the interactive impact of interaction strength and harvest pressure on two trophic levels in a predator–prey system using a mathematical modeling approach. Our results reveal that interaction strength plays a crucial role in shaping population dynamics, with high interaction strength leading to a predator-dominated system and low interaction strength enabling coexistence between species. The addition of predator harvest into the system reveals complex and counterintuitive behavior not seen in unharvested systems, likely due to the destabilizing impacts of harvest at some interaction strengths. Specifically, the inclusion of harvest on the predator can induce a range of behaviors, such as prey release and predator decline, that alter the equilibrium abundance of both predator and prey populations. Interestingly, predator–prey systems with intermediate to high interaction strengths achieve maximum total abundance with low harvest levels rather than in scenarios with no harvest pressure, as prey populations benefit greatly from reduced predation mortality associated with predator harvest. We gain insights into the complex interplay between predator–prey interactions and human activities in shaping community composition and abundances across trophic levels. This study provides potential mechanisms that may explain the observed variation in numerical prey release in trophically complex systems in which predators and prey are both extracted, like coral reef fisheries. Results highlight the need for resource management to consider the wide range of factors that shape ecosystem dynamics to develop effective strategies that safeguard the long-term health of complex ecosystems and the human communities that they support.

Ecosphere↗
USGS2025

From sample to sonde to Sentinel-2: Insights from a multi-scale chlorophyll-a monitoring effort in the Hudson River, New York

Monitoring cyanobacteria and other nuisance phytoplankton in the Hudson River is of great interest given its societal and ecological importance. Satellite remote sensing provides a cost-effective method to monitor chlorophyll- a (chl-a), a common proxy for algal biomass; however, the dynamic nature of rivers complicates approaches traditionally applied to lakes and oceans. During 2021–2023, we collected discrete samples for laboratory measurement of chl-a and measured in situ chl-a fluorescence during a series of longitudinal boat surveys along a 220-km reach of the lower Hudson River. Surveys were timed to coincide with Sentinel-2 satellite overpasses. We first investigated relations between laboratory-measured chl-a concentration and field-measured chl-a fluorescence, observing a weak correlation ( r 2 = 0.25) that improved substantially after splitting data by day (mean r 2 = 0.53). Separately, to estimate chl-a fluorescence using satellite data, we developed a series of random forest models leveraging the rich fluorescence dataset collected. We tested three model types: individual day models, leave-one-out models trained on all days except a holdout test day, and a single pooled model trained on all days. Generally, individual day models exhibited lowest error (mean of mean absolute error [MAE] = 0.16 relative fluorescence units [RFU]), followed by the single pooled model (MAE = 0.22 RFU). Daily holdout models showed highest error (mean MAE = 0.40 RFU); this approach was intended to represent model performance on a day unseen in the training set, providing a more conservative estimate of performance than the more traditional pooled approach. Findings from both analyses emphasize the importance of considering temporal variability when modeling riverine systems.

New Jersey, New York↗
USGS2025

Memory and jamming in fault zone sediments

Many subsurface processes involve transitions in granular material states, from arrested to creeping to flowing. Experiments and frameworks for idealized systems reveal that granular fabrics develop during shearing, co-evolve with applied stress, and govern such transitions. We use microtomography to test whether fabrics at two San Andreas fault sites reflect slip history and whether idealized frameworks extend to nature. Near-surface sediments within the fault zone transition between deformation patterns over the seismic cycle, including bulk/localized grain re-arrangements, individual grain fracturing, and localized zones of fracturing. Aseismic and co-seismic shearing produce distinct preferred grain orientations. Co-seismic fabrics can be preserved after centuries of aseismic strain, aseismic fabrics may be overprinted, and grain size and coordination number influence the fabrics. Idealized frameworks, namely anisotropic critical state theory, frictional jamming, and material memory, can explain our observations, and fault zone sediments likely undergo cycles of memory creation and erasure that influence rigidity spatiotemporally.

California↗