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Water resources science of the U.S. Geological Survey in New York

The U.S. Geological Survey studies the effects of weather, climate, and man-made influences on groundwater levels, streamflow, and reservoir and lake levels, as well as on the ecological health of rivers, lakes, reservoirs, watersheds, estuaries, aquifers, soils, beaches, and wildlife. From these studies, the USGS produces high-quality, timely, and unbiased scientific research and data that are widely accessible and relevant to all levels of government, Tribal Nations, academic institutions, nongovernmental organizations, the private sector, and the general public. In New York, the U.S. Geological Survey works with other Federal agencies, State and municipal government, Tribal Nations, and the private sector to develop products that inform decision makers, legislators, and the general public.

New York↗

Mercury bioaccumulation in fishes from subalpine lakes of the Wallowa-Whitman National Forest, northeastern Oregon and western Idaho

Mercury (Hg) is a globally distributed pollutant that poses considerable risks to human and wildlife health. Over the past 150 years since the advent of the industrial revolution, approximately 80 percent of global emissions have come from anthropogenic sources, largely fossil fuel combustion. As a result, atmospheric deposition of Hg has increased by up to 4-fold above pre-industrial times. Because of their isolation, remote high-elevation lakes represent unique environments for evaluating the bioaccumulation of atmospherically deposited Hg through freshwater food webs, as well as for evaluating the relative importance of Hg loading versus landscape influences on Hg bioaccumulation. The increase in Hg deposition to these systems over the past century, coupled with their limited exposure to direct anthropogenic disturbance make them useful indicators for estimating how changes in Hg emissions may propagate to changes in Hg bioaccumulation and ecological risk. In this study, we evaluated Hg concentrations in fishes of high-elevation, sub-alpine lakes in the Wallowa-Whitman National Forest in northeastern Oregon and western Idaho. Our goals were to (1) assess the magnitude of Hg contamination in small-catchment lakes to evaluate the risk of atmospheric Hg to human and wildlife health, (2) quantify the spatial variability in fish Hg concentrations, and (3) determine the ecological, limnological, and landscape factors that are best correlated with fish total mercury (THg) concentrations in these systems. Across the 28 study lakes, mean THg concentrations of resident salmonid fishes varied as much as 18-fold among lakes. Importantly, our top statistical model explained 87 percent of the variability in fish THg concentrations among lakes with four key landscape and limnological variables— catchment conifer density (basal area of conifers within a lake’s catchment), lake surface area, aqueous dissolved sulfate, and dissolved organic carbon. The basal area of conifers within a lake’s catchment was by far the most important variable explaining fish THg concentrations, with an increase in THg concentrations of more than 400 percent across the forest density spectrum. Across all study lakes, fish THg concentrations ranged from 0.004 to 0.438 milligrams per kilogram wet weight (mg/kg ww). Only a single individual fish sample exceeded the U.S. Environmental Protection Agency’s (USEPA) human health tissue residue criteria of 0.3 mg/kg ww. However, 54 percent of fish (N=177) exceeded the more stringent tissue residue criteria (0.04 mg/kg ww) adopted by the Oregon Department of Environmental Quality to better protect subsistence fishers. Additionally, 2 and 10 percent of fish exceeded levels associated with reduced common loon reproduction and behavior, respectively. Whereas 25 and 68 percent of fish sampled exceeded concentrations deemed protective of mink and kingfisher, respectively. These results suggest that THg concentrations may be present in these lakes at levels associated with ecological risk. It is important to note however, that accurate inference on potential impairment cannot be made within the context of this study design and further research is needed to better quantify these risks.

Oregon;Idaho↗

Gains and gaps in knowledge surrounding freshwater mollusk ecosystem services

Ecosystems provide essential services to people including food, water, climate regulation, and aesthetic experiences. Biodiversity can enhance and stabilize ecosystem function and the resulting services natural systems provide. Freshwater mollusks are a diverse group that provide a variety of ecosystem services through their feeding habits (e.g., filter feeding, grazing), top-down and bottom-up effects on food webs, provisioning of habitat, use as a food resource by people, and cultural importance. Research focused on quantifying the direct and indirect ways mollusks influence ecosystem services may help inform policy makers and the public about the value of mollusk communities to society. The Freshwater Mollusk Conservation Society highlighted the need to evaluate mollusk ecosystem services in their 2016 National Strategy for the Conservation of Native Freshwater Mollusks, and, while significant progress has been made, considerable work remains across the research, management, and outreach communities. We briefly review the global status of native freshwater mollusks, assess the current state of knowledge regarding their ecosystem services, and highlight recent advances and knowledge gaps to guide further research and conservation actions. Our intention is to provide ecologists, conservationists, economists, and social scientists with information to improve science-based consideration of the social, ecological, and economic value of mollusk communities to healthy aquatic systems.

Freshwater Mollusk Biology and Conservation↗

Grand challenges of hydrologic modeling for food-energy-water nexus security in high mountain Asia

Climate-influenced changes in hydrology affect water-food-energy security that may impact up to two billion people downstream of the High Mountain Asia (HMA) region. Changes in water supply affect energy, industry, transportation, and ecosystems (agriculture, fisheries) and as a result, also affect the region's social, environmental, and economic fabrics. Sustaining the highly interconnected food-energy-water nexus (FEWN) will be a fundamental and increasing challenge under a changing climate regime. High variability in topography and distribution of glaciated and snow-covered areas in the HMA region, and scarcity of high resolution ( in-situ ) data make it difficult to model and project climate change impacts on individual watersheds. We lack basic understanding of the spatial and temporal variations in climate, surface impurities in snow and ice such as black carbon and dust that alter surface albedo, and glacier mass balance and dynamics. These knowledge gaps create challenges in predicting where and when the impact of changes in river flow will be the most significant economically and ecologically. In response to these challenges, the United States National Aeronautics and Space Administration (NASA) established the High Mountain Asia Team (HiMAT) in 2016 to conduct research to address knowledge gaps. This paper summarizes some of the advances HiMAT made over the past 5 years, highlights the scientific challenges in improving our understanding of the hydrology of the HMA region, and introduces an integrated assessment framework to assess the impacts of climate changes on the FEWN for the HMA region. The framework, developed under a NASA HMA project, links climate models, hydrology, hydropower, fish biology, and economic analysis. The framework could be applied to develop scientific understanding of spatio-temporal variability in water availability and the resultant downstream impacts on the FEWN to support water resource management under a changing climate regime.

Frontiers in Water↗

Southwestern desert resources

The southwestern deserts stretch from southeastern California to west Texas and then south to central Mexico. The landscape of this region is known as basin and range topography featuring to "sky islands" of forest rising from the desert lowlands which creates a uniquely diverse ecology. The region is further complicated by an international border, where governments have caused difficulties for many animal populations. This book puts a spotlight on individual research projects which are specific examples of work being done in the area and when they are all brought together, to shed a general light of understanding the biological and cultural resources of this vast region so that those same resources can be managed as effectively and efficiently as possible. The intent is to show that collaborative efforts among federal, state agency, university, and private sector researchers working with land managers, provides better science and better management than when scientists and land managers work independently.

Book↗

Influence of weather extremes on the water levels of glaciated prairie wetlands

Orchid Meadows is a long-term wetland research and monitoring site on the Coteau des Prairie in extreme east-central South Dakota, USA. It is a 65-ha Waterfowl Production Area with numerous temporary, seasonal, and semi-permanent wetlands. Ground water and surface water have been monitored at the site from 1987 to 1989 and from 1993 to the present. Vegetation has been monitored since 1993. The monitoring record includes two nearly back-to-back weather extremes: a drought in the late 1980s and a deluge in the early- to mid-1990s. Wetlands differed sharply in water levels between 3-yr dry and wet periods. For example, the time of inundation ranged among semi-permanent wetlands from 13 to 71 percent during the dry years to 100 percent during the wet years, while for seasonal wetlands, it was 0-29 percent and 46-100 percent, respectively, during dry and wet periods. Temporary wetlands had no surface water during the dry period but had standing water 0-67 percent of the time during the deluge years. The highest ground-water levels during the dry period were lower than most levels during the wet period. The difference in the water-table elevations of temporary wetlands between the periods was as much as 4 m. Ground-water levels near semi-permanent wetlands were considerably more stable (annual range of 0.3-1.6 m) than those near temporary wetlands (1.3-2.5 m). The results support the concept that weather extremes drive the wetland cover cycle and other key ecological processes in prairie wetlands. The new data from Orchid Meadows, together with other long-term data sets from North Dakota and Saskatchewan, Canada, are useful for many research purposes, including the parameterization and testing of models that simulate the effects of climate variability and climate change on prairie wetland ecosystems.

Wetlands↗

Pesticides in surface waters: distribution, trends, and governing factors

Pesticde use in agriculture and non-agriculture settings has increased dramatically over the last several decades. Concern about adverse effects on the environment and human health has spurred an enormous amount of research into their environmental behavior and fate. Pesticides in Surface Waters presents a comprehensive summary of this research. This book evaluates published studies that focus on measuring pesticide concentration. The studies chosen include peer reviewed scientific literature, government reports, laboratory studies, and those using microcosms and artificial streams and ponds. The authors used this information to develop their overview of pesticide contamination of surface waters. The exhaustive compilation of data along with the fundamental science make this book essential for those involved in pesticide use, environmental protection, water quality, and human or ecological risk assessment. Pesticides in Surface Waters covers the results of actual studies, sources of pesticides to surface water, fate and transport, and environmental significance. Hundreds of data-packed tables, maps, charts, and drawings illustrate the key points, making research and application easy and cost effective.

Book↗

Developing species-age cohorts from forest inventory and analysis data to parameterize a forest landscape model

Simulating long-term, landscape level changes in forest composition requires estimates of stand age to initialize succession models. Detailed stand ages are rarely available, and even general information on stand history often is lacking. We used data from USDA Forest Service Forest Inventory and Analysis (FIA) database to estimate broad age classes for a forested landscape to simulate changes in landscape composition and structure relative to climate change at Fort Drum, a 43,000 ha U.S. Army installation in northwestern New York. Using simple linear regression, we developed relationships between tree diameter and age for FIA site trees from the host and adjacent ecoregions and applied those relationships to forest stands at Fort Drum. We observed that approximately half of the variation in age was explained by diameter breast height (DBH) across all species studied ( r 2 = 0.42 for sugar maple Acer saccharum to 0.63 for white ash Fraxinus americana ). We then used age-diameter relationships from published research on northern hardwood species to calibrate results from the FIA-based analysis. With predicted stand age, we used tree species life histories and environmental conditions represented by ecological site types to parameterize a stochastic forest landscape model (LANDIS-II) to spatially and temporally model successional changes in forest communities at Fort Drum. Forest stands modeled over 100 years without significant disturbance appeared to reflect expected patterns of increasing dominance by shade-tolerant mesophytic tree species such as sugar maple, red maple ( Acer rubrum ), and eastern hemlock ( Tsuga canadensis ) where soil moisture was sufficient. On drier sandy soils, eastern white pine ( Pinus strobus ), red pine ( P. resinosa ), northern red oak ( Quercus rubra ), and white oak ( Q. alba ) continued to be important components throughout the modeling period with no net loss at the landscape scale. Our results suggest that despite abundant precipitation and relatively low evapotranspiration rates for the region, low soil water holding capacity and fertility may be limiting factors for the spread of mesophytic species on excessively drained soils in the region. Increasing atmospheric temperatures projected for the region could alter moisture regimes for many coarse-textured soils providing a possible mechanism for expansion of xerophytic tree species.

New York↗

Winter climate change and coastal wetland foundation species: Salt marshes vs. mangrove forests in the southeastern United States

We live in an era of unprecedented ecological change in which ecologists and natural resource managers are increasingly challenged to anticipate and prepare for the ecological effects of future global change. In this study, we investigated the potential effect of winter climate change upon salt marsh and mangrove forest foundation species in the southeastern United States. Our research addresses the following three questions: (1) What is the relationship between winter climate and the presence and abundance of mangrove forests relative to salt marshes; (2) How vulnerable are salt marshes to winter climate change-induced mangrove forest range expansion; and (3) What is the potential future distribution and relative abundance of mangrove forests under alternative winter climate change scenarios? We developed simple winter climate-based models to predict mangrove forest distribution and relative abundance using observed winter temperature data (1970–2000) and mangrove forest and salt marsh habitat data. Our results identify winter climate thresholds for salt marsh–mangrove forest interactions and highlight coastal areas in the southeastern United States (e.g., Texas, Louisiana, and parts of Florida) where relatively small changes in the intensity and frequency of extreme winter events could cause relatively dramatic landscape-scale ecosystem structural and functional change in the form of poleward mangrove forest migration and salt marsh displacement. The ecological implications of these marsh-to-mangrove forest conversions are poorly understood, but would likely include changes for associated fish and wildlife populations and for the supply of some ecosystem goods and services.

Global Change Biology↗

Understanding how microbiomes influence the systems they inhabit

Translating the ever-increasing wealth of information on microbiomes (environment, host, or built environment) to advance the understanding of system-level processes is proving to be an exceptional research challenge. One reason for this challenge is that relationships between characteristics of microbiomes and the system-level processes they influence are often evaluated in the absence of a robust conceptual framework and reported without elucidating the underlying causal mechanisms. The reliance on correlative approaches limits the potential to expand the inference of a single relationship to additional systems and advance the field. We propose that research focused on how microbiomes influence the systems they inhabit should work within a common framework and target known microbial processes that contribute to the system-level processes of interest. Here we identify three distinct categories of microbiome characteristics (microbial processes, microbial community properties, and microbial membership) and propose a framework to empirically link each of these categories to each other and the broader system level processes they affect. We posit that it is particularly important to distinguish microbial community properties that can be predicted from constituent taxa (community aggregated traits) from and those properties that are currently unable to be predicted from constituent taxa (emergent properties). Existing methods in microbial ecology can be applied to more explicitly elucidate properties within each of these categories and connect these three categories of microbial characteristics with each other. We view this proposed framework, gleaned from a breadth of research on environmental microbiomes and ecosystem processes, as a promising pathway with the potential to advance discovery and understanding across a broad range of microbiome science.

Nature Microbiology↗

Adaptive capacity of freshwater organisms in North America: Current understanding and future applications

Freshwater species are increasingly threatened by climate change, yet our ability to assess their vulnerability remains incomplete. Typically, climate change vulnerability assessments (CCVAs) evaluate three components: exposure, sensitivity, and adaptive capacity. Adaptive capacity, defined as the ability of a species to adjust to changing conditions, provides critical insight into how species may persist under future scenarios and can strengthen conservation planning by highlighting opportunities for resilience and targeted management strategies. Trait-based approaches offer a promising path for managers to operationalize adaptive capacity by identifying measurable biological and ecological traits that influence climate change response strategies. However, these insights are rarely integrated into broader vulnerability frameworks that support conservation decision making. We build on previous research to synthesize current understanding of adaptive capacity for three freshwater taxa in North America: fishes, mussels, and crayfishes. Our objectives were to: (1) assess the relevance of adaptive capacity factors for fishes, mussels, and crayfishes; (2) identify key opportunities and gaps in linking trait-based information into adaptive capacity assessments; and (3) illustrate how incorporating adaptive capacity can enhance management decisions for freshwater species under climate change. We used an expert workshop, literature review, and case studies to identify relevant adaptive capacity factors, assess available information, and evaluate inclusion in management contexts. We found that all three taxa had sufficient information to inform adaptive capacity assessments. In addition to existing adaptive capacity factors, we identified Morphology as an important yet underutilized cross-cutting diagnostic category when information was limited. By explicitly linking trait-based approaches with adaptive capacity frameworks, we offer practical guidance for improving climate adaptation strategies and prioritizing management actions for freshwater biodiversity under accelerating global change.

Global Change Biology Communications↗

Ecology of an estuarine mysid shrimp in the Columbia River (USA)

The estuarine mysid, Neomysis mercedis, has colonized John Day and other run-of-the-river Reservoirs of the Columbia River, over 400 km from the estuary. In John Day Reservoir N. mercedis numbers peaked (2 m-3) in August in areas near the dam in association with lower water velocity and softer bottom than at the upstream sampling sites. Neomysis broods were primarily released in late spring and early fall. Gut content analysis showed that Neomysis feeds mostly on cladoceran zooplankton and rotifers in John Day Reservoir. Diel vertical migration was documented, with daytime distribution restricted to the bottom and preferentially to the soft-textured sediments in the deepest areas. Common pelagic fishes in the reservoir, especially juvenile American shad (Alosa sapidissima) and chinook salmon (Oncorhynchus tshawytscha), are daytime zooplankton feeders that cannot prey on Neomysis owing to mysid diel vertical migration. Thus, Neomysis has become an important food web component in John Day Reservoir. We also collected N. mercedis further upstream in Lower Granite Reservoir, where another estuarine crustacean, Corophium salmonis, also is reported, underscoring the need to better understand the role of these estuarine invertebrates in the trophic ecology of the Columbia River. Copyright ?? 2006 John Wiley & Sons, Ltd.

Oregon, Washington↗

Western juniper management: assessing strategies for improving greater sage-grouse habitat and rangeland productivity

Western juniper ( Juniperus occidentalis subsp. occidentalis ) range expansion into sagebrush steppe ecosystems has affected both native wildlife and economic livelihoods across western North America. The potential listing of the greater sage-grouse ( Centrocercus urophasianus ) under the U.S. Endangered Species Act has spurred a decade of juniper removal efforts, yet limited research has evaluated program effectiveness. We used a multi-objective spatially explicit model to identify optimal juniper removal sites in Northeastern California across weighted goals for ecological (sage-grouse habitat) and economic (cattle forage production) benefits. We also extended the analysis through alternative case scenarios that tested the effects of coordination among federal agencies, budgetary constraints, and the use of fire as a juniper treatment method. We found that sage-grouse conservation and forage production goals are somewhat complementary, but the extent of complementary benefits strongly depends on spatial factors and management approaches. Certain management actions substantially increase achievable benefits, including agency coordination and the use of prescribed burns to remove juniper. Critically, our results indicate that juniper management strategies designed to increase cattle forage do not necessarily achieve measurable sage-grouse benefits, underscoring the need for program evaluation and monitoring.

California, Oregon, Nevada↗

Book review: World atlas of mangroves

Nearly 14 years have passed since the first atlas, World Mangrove Atlas (Spalding et al. 1997 ), was published. While scientists throughout the world have shared their insights about these ecosystems from a handful of “classic” mangrove ecology treatises, no book since has provided the same platform for understanding the global importance of mangroves by simply defining their distribution. The vast majority of mangrove research programs are modest in size and limited in funding. Nonetheless, much knowledge has been gained since the last atlas, including a potential role for mangroves in storm protection, proactive adjustment of soil surface elevation with sea-level rise, coastal water conservation, economic importance locally, etc. Furthermore, by documenting what can be lost, this book allows the reader to imagine what a world without mangroves might look like (see also Science 317, 41–42). If the first atlas established a mere image of an important wetland community type in peril, then this current edition paints a picture rivaling what an artist may have envisioned. The World Atlas of Mangroves is a comprehensive, well-written, ambitious, and artistic work that we can certainly recommend, and that should be part of any serious wetland library. Review info: World Atlas of Mangroves . By Spalding, M., M. Kainuma, and L. Collins, 2010. ISBN: 978-1844076574, 319 pp.

Wetlands↗

Enhanced microplastic fragmentation along human built structures in an urban waterway

Plastic pollution and microplastic (MP, 1 µm to 5 mm) generation are growing problems affecting the global community and a wide range of natural and disturbed environments. Urban and suburban waterways are directly impacted by plastic pollution due to their proximity to population centers and many different types single use plastic waste sources. In this study, plastic waste accumulation and fragmentation was investigated along the Cooper River in Camden County, NJ. Polymer composition was identified for individual plastic waste particles collected along the Cooper River using Fourier transform infrared (FTIR) spectrometry. Multiple human-built structures (Wallworth Lake, Evans Pond and Hopkins Pond dams) along the Cooper River were found to accumulate different types of plastic waste. The accumulation of plastic waste along these structures resulted in the initial stages of plastic fragmentation and the identification of large MP particles (1 to 5 mm). Quantitative analysis revealed that fragmented polystyrene (PS) particles constituted 82.8% of the total plastic fragments identified, most of which were identified at the Wallworth Lake dam. Many other types of fragmented plastic litter, including polyethylene and polypropylene, were identified at the Wallworth Lake dam, as well. This research demonstrates that engineered structures within urban and suburban aquatic ecosystems serve as significant aggregators of plastic debris, thereby catalyzing its breakdown into microplastics. Considering the escalating ecological and human health ramifications of microplastic proliferation, the fragmentation of plastic waste in an urban and suburban waterway observed in this study can also result in potentially toxic smaller MP particles, and increased exposure to aquatic organisms and humans.

New Jersey↗

Factors structuring macrofaunal communities of hydrocarbon seeps along the Cascadia margin

Cold seeps, fueled by hydrocarbon-based chemosynthesis, support unique benthic communities that can vary across small spatial scales influenced by local geochemistry. We examined the community structure and function of macrofauna in cold seeps along the Cascadia margin on the edge of gas hydrate stability—a dynamic environment that may fluctuate as seafloor temperatures change. These communities were assessed in relation to their sediment environment to provide baseline data for these previously uninvestigated seeps and decipher the most significant variables structuring them. Specific environmental drivers investigated include sediment organic carbon, total nitrogen, C:N ratios, stable isotopes (δ 13 C and δ 15 N), redox potential, grain size, and porefluid chemistry. Macrofaunal community composition varied across locations separating into twelve distinct clusters. Several co-located cores clustered separately, indicating high heterogeneity in these communities at small spatial scales. Significant drivers of macrofauna communities included clay and sand content, C:N, δ 15 N values, organic carbon content, and depth. Functional trait composition was influenced by similar drivers, including depth, δ 15 N values, C:N, and sand content. Our results indicate similar environmental variables structure macrofaunal community composition and function across small- and large-scale gradients, contributing to our understanding of heterogeneity in local and regional factors that shape seep macrofaunal communities. This is the first investigation of macrofauna at these recently discovered seeps and provides baseline data on the hydrate stability zone for future comparisons, advancing our knowledge of broad-scale trends in seep macrofauna ecology.

California, Oregon, Washington↗

Feeding ecology of lake whitefish larvae in eastern Lake Ontario

We examined the feeding ecology of larval lake whitefish ( Coregonus clupeaformis ) in Chaumont Bay, Lake Ontario, during April and May 2004-2006. Larvae were collected with towed ichthyoplankton nets offshore and with larval seines along the shoreline. Larval feeding periodicity was examined from collections made at 4-h intervals over one 24-h period in 2005. Inter-annual variation in diet composition (% dry weight) was low, as was spatial variation among collection sites within the bay. Copepods (81.4%), primarily cyclopoids (59.1%), were the primary prey of larvae over the 3-year period. Cladocerans (8.1%; mainly daphnids, 6.7%) and chironomids (7.3%) were the other major prey consumed. Larvae did not exhibit a preference for any specific prey taxa. Food consumption of lake whitefish larvae was significantly lower at night (i.e., 2400 and 0400 h). Substantial variation in diet composition occurred over the 24-h diel study. For the 24-h period, copepods were the major prey consumed (50.4%) and their contribution in the diet ranged from 29.3% (0400 h) to 85.9% (1200 h). Chironomids made up 33.4% of the diel diet, ranging from 8.0% (0800 h) to 69.9% (0400 h). Diel variation in the diet composition of lake whitefish larvae may require samples taken at several intervals over a 24-h period to gain adequate representation of their feeding ecology.

Journal of Great Lakes Research↗