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Stepped-combustion 14C dating of sediment: A comparison with established techniques

Radiocarbon dating of bulk sediment has long been used as a method of last resort when reliable wood, charcoal, or plant macrofossils are not available for analysis. Accurate dating of sediment is complicated by the presence of multiple organic carbon fractions, each with a potentially different 14 C activity. Additionally, the presence of carbon bound by clay minerals can significantly reduce the accuracy of a sediment age determination, with the oldest 14 C ages seen in samples with the highest clay content (Scharpenseel and Becker-Heidmann 1992).

Radiocarbon

Non-destructive measurement of soil liquefaction density change by crosshole radar tomography, Treasure Island, California

A ground penetrating radar (GPR) experiment at the Treasure Island Test Site [TILT] was performed to non-destructively image the soil column for changes in density prior to, and following, a liquefaction event. The intervening liquefaction was achieved by controlled blasting. A geotechnical borehole radar technique was used to acquire high-resolution 2-D radar velocity data. This method of non-destructive site characterization uses radar trans-illumination surveys through the soil column and tomographic data manipulation techniques to construct radar velocity tomograms, from which averaged void ratios can be derived at 0.25 - 0.5m pixel footprints. Tomograms of void ratio were constructed through the relation between soil porosity and dielectric constant. Both pre- and post-blast tomograms were collected and indicate that liquefaction related densification occurred at the site. Volumetric strains estimated from the tomograms correlate well with the observed settlement at the site. The 2-D imagery of void ratio can serve as high-resolution data layers for numerical site response analysis.

Book

Rapid detection of Escherichia coli and enterococci in recreational water using an immunomagnetic separation/adenosine triphosphate technique

Aims: The aim of this study was to examine a rapid method for detecting Escherichia coli and enterococci in recreational water. Methods and Results: Water samples were assayed for E. coli and enterococci by traditional and immunomagnetic separation/adenosine triphosphate (IMS/ATP) methods. Three sample treatments were evaluated for the IMS/ATP method: double filtration, single filtration, and direct analysis. Pearson's correlation analysis showed strong, significant, linear relations between IMS/ATP and traditional methods for all sample treatments; strongest linear correlations were with the direct analysis (r = 0.62 and 0.77 for E. coli and enterococci, respectively). Additionally, simple linear regression was used to estimate bacteria concentrations as a function of IMS/ATP results. The correct classification of water-quality criteria was 67% for E. coli and 80% for enterococci. Conclusions: The IMS/ATP method is a viable alternative to traditional methods for faecal-indicator bacteria. Significance and Impact of the Study: The IMS/ATP method addresses critical public health needs for the rapid detection of faecal-indicator contamination and has potential for satisfying US legislative mandates requiring methods to detect bathing water contamination in 2 h or less. Moreover, IMS/ATP equipment is considerably less costly and more portable than that for molecular methods, making the method suitable for field applications. ?? 2009 The Authors.

Journal of Applied Microbiology

Quantitative imaging of volcanic plumes — Results, needs, and future trends

Recent technology allows two-dimensional “imaging” of trace gas distributions in plumes. In contrast to older, one-dimensional remote sensing techniques, that are only capable of measuring total column densities, the new imaging methods give insight into details of transport and mixing processes as well as chemical transformation within plumes. We give an overview of gas imaging techniques already being applied at volcanoes (SO 2 cameras, imaging DOAS, FT-IR imaging), present techniques where first field experiments were conducted (LED-LIDAR, tomographic mapping), and describe some techniques where only theoretical studies with application to volcanology exist (e.g. Fabry–Pérot Imaging, Gas Correlation Spectroscopy, bi-static LIDAR). Finally, we discuss current needs and future trends in imaging technology.

Journal of Volcanology and Geothermal Research

Resolving the percentage of component terrains within single resolution elements

An approximate maximum likelihood technique employing a widely available (BMD) discriminant analysis program has been developed for resolving the percentage of component terrains within single resolution elements. The method employs all four channels of Landsat data simultaneously and does not require prior knowledge of the percentage of components in mixed pixels. For five test cases, the method proved to be superior to single band weighted average and linear regression techniques and permitted an estimate of the total area occupied by component terrains to within 6 percent of the true area covered. It is believed this accuracy should be sufficient for many geologic applications of Landsat multispectral data.

Photogrammetric Engineering and Remote Sensing

Rethinking the use of seabed sediment temperature profiles to trace submarine groundwater flow

Submarine groundwater fluxes across the seafloor facilitate important hydrological and biogeochemical exchanges between oceans and seabed sediment, yet few studies have investigated spatially distributed groundwater fluxes in deep‐ocean environments such as continental slopes. Heat has been previously applied as a submarine groundwater tracer using an analytical solution to a heat flow equation assuming steady state conditions and homogeneous thermal conductivity. These assumptions are often violated in shallow seabeds due to ocean bottom temperature changes or sediment property variations. Here heat tracing analysis techniques recently developed for terrestrial settings are applied in concert to examine the influences of groundwater flow, ocean temperature changes, and seabed thermal conductivity variations on deep‐ocean sediment temperature profiles. Temperature observations from the sediment and bottom ocean water on the Scotian Slope off eastern Canada are used to demonstrate how simple thermal methods for tracing groundwater can be employed if more comprehensive techniques indicate that the simplifying assumptions are valid. The spatial distribution of the inferred groundwater fluxes on the slope suggests a downward groundwater flow system with recharge occurring over the upper‐middle slope and discharge on the lower slope. We speculate that the downward groundwater flow inferred on the Scotian Slope is due to density‐driven processes arising from underlying salt domes, in contrast with upward slope systems driven by geothermal convection. Improvements in the design of future submarine hydrogeological studies are proposed for thermal data collection and groundwater flow analysis, including new equations that quantify the minimum detectable flux magnitude for a given sensor accuracy and profile length.

Water Resources Research

Characterizing sources of uncertainty from global climate models and downscaling techniques

In recent years climate model experiments have been increasingly oriented towards providing information that can support local and regional adaptation to the expected impacts of anthropogenic climate change. This shift has magnified the importance of downscaling as a means to translate coarse-scale global climate model (GCM) output to a finer scale that more closely matches the scale of interest. Applying this technique, however, introduces a new source of uncertainty into any resulting climate model ensemble. Here we present a method, based on a previously established variance decomposition method, to partition and quantify the uncertainty in climate model ensembles that is attributable to downscaling. We apply the method to the Southeast U.S. using five downscaled datasets that represent both statistical and dynamical downscaling techniques. The combined ensemble is highly fragmented, in that only a small portion of the complete set of downscaled GCMs and emission scenarios are typically available. The results indicate that the uncertainty attributable to downscaling approaches ~20% for large areas of the Southeast U.S. for precipitation and ~30% for extreme heat days (> 35°C) in the Appalachian Mountains. However, attributable quantities are significantly lower for time periods when the full ensemble is considered but only a sub-sample of all models are available, suggesting that overconfidence could be a serious problem in studies that employ a single set of downscaled GCMs. We conclude with recommendations to advance the design of climate model experiments so that the uncertainty that accrues when downscaling is employed is more fully and systematically considered.

Journal of Applied Meteorology and Climatology

Determination of earthquake magnitude for early warning from the time-dependence of P-wave amplitudes

We propose a method that utilizes the time dependence of P ‐wave displacement amplitudes to estimate the final magnitude ( ⁠M⁠ ) for earthquake early warning (EEW) before the arrival of the peak amplitude. A relation between M and P ‐wave displacement amplitude is employed for the method. Its value is set as a function of time from the P arrival, and is determined using a K‐NET dataset recorded in Japan from a scaling relation between M and the time dependence of P ‐wave displacement. A test to check the performance of the proposed equation demonstrates in a statistical sense that this technique enables us to estimate M more rapidly than conventional methods without loss of accuracy. We conclude that the approach proposed in this article effectively gains a longer lead time as well as reduces the blind zone for EEW.

Bulletin of the Seismological Society of America

Digital processing of array seismic recordings

This technical letter contains a brief review of the operations which are involved in digital processing of array seismic recordings by the methods of velocity filtering, summation, cross-multiplication and integration, and by combinations of these operations (the "UK Method" and multiple correlation). Examples are presented of analyses by the several techniques on array recordings which were obtained by the U.S. Geological Survey during chemical and nuclear explosions in the western United States. Seismograms are synthesized using actual noise and P n -signal recordings, such that the signal-to-noise ratio, onset time and velocity of the signal are predetermined for the synthetic record. These records are then analyzed by summation, cross-multiplication, multiple correlation and the UK technique, and the results are compared. For all of the examples presented, analysis by the non-linear techniques of multiple correlation and cross-multiplication of the traces on an array recording are preferred to analyses by the linear operations involved in summation and the UK Method.

Crustal Studies Technical Letter

A comparison of triploid induction validation techniques

Triploidy induction is a technique that allows genetic manipulation of chromosome number to control reproduction and potentially create faster‐growing animals; however, most methods for inducing polyploidy are not 100% effective. Using sunshine bass (white bass Morone chrysops ♀ × striped bass M. saxatilis ♂) as a model, we cross‐validated the most common verification techniques: DNA staining and fluorescence quantification with a flow cytometer, erythrocyte nuclear volume with a Coulter counter particle size analyzer, silver staining of nucleolar organizer regions (NORs), and cytological karyotyping. Results indicated that the electronic techniques of particle size analysis and flow cytometry were the simplest and quickest methods of validation. The major drawback of both electronic ploidy determination methods is the cost of the equipment required for analysis. Cytological karyotyping was the most accurate method for determining polyploidy because actual chromosome numbers were determined. It was also the most time‐consuming, tedious, and frustrating of the techniques, which reduces its applicability in mass screening of fish. Silver staining was the least expensive technique used for verifying a nominal number of fish, but it was also the most suspect because the NORs were sometimes difficult to detect, and there were conflicting results in older fish. All techniques demand a certain technical competence that can either be self‐taught or requires extramural training.

Progressive Fish-Culturist

Comparison of estimators for monitoring long-term population trends in deer mice, Peromyscus maniculatus, on the California Channel Islands

Capture-recapture methods are commonly used to estimate abundance and density of wild animal populations. Although a variety of sophisticated analytical techniques are available to evaluate capture-recapture data, vertebrate monitoring programs often lack the resources (e.g., time, personnel, and/or analytical expertise) to apply these methods. As an alternative, simple population indices, such as counts of unique individuals, may provide sufficient information to detect meaningful changes in population size. In this study we investigated whether a population index, easily generated from mark-recapture data under all conditions, might be used to provide valid ecological information for managers interested in long-term population trends of deer mice ( Peromyscus maniculatus ) on the California Channel Islands. In practice, determining the efficacy of estimating abundance from mark-recapture data and indices using empirical data (as opposed to simulated data) is difficult given the scarcity of long-term data sets that describe real populations. Using mark-recapture data that span 18 years ( n = 122 trapping events, >12,000 marked individuals) for deer mice on 2 of the islands, we compared density estimates obtained from several commonly used mark-recapture models and also compared these estimates to index counts. Populations of island deer mice are extremely dynamic; estimated densities over the data period varied from 0 to >1200 mice/ha. Density estimates from models in program CAPTURE and program DENSITY, as well as from model-averaged Huggins models, were strongly correlated with each other and with the density index. Densities calculated by the models and the index showed similar patterns of population variation and trend over time for all 5 sites. For long-term population monitoring and assessment of population trends in deer mice, our findings suggest that the use of a simple index may provide adequate understanding of ecologically relevant population changes, though data collection methods that allow for more detailed analyses using advanced modeling techniques should be maintained.

California

Lyme disease and conservation

Lyme disease is a tick-borne illness that is widespread in North America, especially in the northeastern and northcentral United States. This disease could negatively influence efforts to conserve natural populations in two ways: (1) the disease could directly affect wild animal health; and (2) tick control efforts could adversely affect natural populations and communities. Lyme disease affects several domestic animals, but symptoms have been reported in only a few wild species. Direct effects of Lyme disease on wild animal populations have not been reported, but the disease should be considered as a possible cause in cases of unexplained population declines in endemic areas. Methods available to manage ticks and Lyme disease include human self-protection techniques, manipulation of habitats and host species populations, biological control, and pesticide applications. The diversity of available techniques allows selection of approaches to minimize environmental effects by (1) emphasizing personal protection techniques, (2) carefully targeting management efforts to maximize efficiency, and (3) integrating environmentally benign techniques to improve management while avoiding broad-scale environmentally destructive approaches. The environmental effects of Lyme disease depend, to a large extent, on the methods chosen to minimize human exposure to infected ticks. Conservation biologists can help design tick management programs that effectively lower the incidence of human Lyme disease while simultaneously minimizing negative effects on natural populations.

Conservation Biology

hypoDD-A Program to Compute Double-Difference Hypocenter Locations

HypoDD is a Fortran computer program package for relocating earthquakes with the double-difference algorithm of Waldhauser and Ellsworth (2000). This document provides a brief introduction into how to run and use the programs ph2dt and hypoDD to compute double-difference (DD) hypocenter locations. It gives a short overview of the DD technique, discusses the data preprocessing using ph2dt, and leads through the earthquake relocation process using hypoDD. The appendices include the reference manuals for the two programs and a short description of auxiliary programs and example data. Some minor subroutines are presently in the c language, and future releases will be in c. Earthquake location algorithms are usually based on some form of Geiger’s method, the linearization of the travel time equation in a first order Taylor series that relates the difference between the observed and predicted travel time to unknown adjustments in the hypocentral coordinates through the partial derivatives of travel time with respect to the unknowns. Earthquakes can be located individually with this algorithm, or jointly when other unknowns link together the solutions to indivdual earthquakes, such as station corrections in the joint hypocenter determination (JHD) method, or the earth model in seismic tomography. The DD technique (described in detail in Waldhauser and Ellsworth, 2000) takes advantage of the fact that if the hypocentral separation between two earthquakes is small compared to the event-station distance and the scale length of velocity heterogeneity, then the ray paths between the source region and a common station are similar along almost the entire ray path (Fréchet, 1985; Got et al., 1994). In this case, the difference in travel times for two events observed at one station can be attributed to the spatial offset between the events with high accuracy. DD equations are built by differencing Geiger’s equation for earthquake location. In this way, the residual between observed and calculated travel-time difference (or double-difference) between two events at a common station are a related to adjustments in the relative position of the hypocenters and origin times through the partial derivatives of the travel times for each event with respect to the unknown. HypoDD calculates travel times in a layered velocity model (where velocity depends only on depth) for the current hypocenters at the station where the phase was recorded. The double-difference residuals for pairs of earthquakes at each station are minimized by weighted least squares using the method of singular value decomposition (SVD) or the conjugate gradients method (LSQR, Paige and Saunders, 1982). Solutions are found by iteratively adjusting the vector difference between nearby hypocentral pairs, with the locations and partial derivatives being updated after each iteration. Details about the algorithm can be found in Waldhauser and Ellsworth (2000). When the earthquake location problem is linearized using the double-difference equations, the common mode errors cancel, principally those related to the receiver-side structure. Thus we avoid the need for station corrections or high-accuracy of predicted travel times for the portion of the raypath that lies outside the focal volume. This approach is especially useful in regions with a dense distribution of seismicity, i.e. where distances between neighboring events are only a few hundred meters. The improvement of double-difference locations over ordinary JHD locations is shown in Figure 1 for about 10,000 earthquakes that occurred during the 1997 seismic crisis in the Long Valley caldera, California. While the JHD locations (left panel) show a diffuse picture of the seismicity, double-difference locations (right panel) bring structural details such as the location of active fault planes into sharp focus.

Open-File Report

Comparison of methods for measuring surface area of submersed aquatic macrophytes

The surface area of submersed macrophytes is often viewed from different perspectives such as substrate for colonization by periphyton, or protective cover for fishes. Consequently, several different methods have been used to measure it. We describe a method for measuring that area with an electronic surface area meter, a device that yields, for large samples of macrophytes, measurements in units of square meters of plant surface area per square meter of bottom. Unpreserved macrophytes, pressed gently between plastic sheets, are passed through the sensing head of the meter, which electronically scans and measures their surface area. The technique is several times faster and more precise than previous methods even for plants with finely dissected leaves.

Journal of Freshwater Ecology

Borehole geophysical investigations in the south Texas uranium district

Contrasts of electrical properties between uranium deposits and their host rocks in South Texas are subtle. In places where deposits are small or deep, conventional geophysical well-logging techniques and hole-to-hole measurements may be the only practical method to detect changes in rock properties associated with the occurrence of uranium ore deposits. Two separate ore-producing areas in South Texas were chosen for studying borehole geophysical techniques applied to uranium-exploration problems. Extensive measurements of physical properties were made on cores and taken from holes where electrical-resistivity, induced-polarization and gamam-ray logs were run. These analyses show that: (1) induced-polarization anomalies are caused by a change in pyrite content and clay-sized material content and (2) resistivity anomalies are associated with a change in clay-sized material content and cementation. In addition to conventional borehole techniques, hole-to-hole induced-polarization and resistivity tests were made in South Texas. These measurements were made by placing a current source down one hole and a receiver cable down an adjacent hole whose separation ranged from 30 to 300 m and hole depths varied from 80 to 270 m. These tests show that hole-to-hole measurements can be used to detect changes in physical properties, associated with uranium ore, that occur between boreholes. Hole-to-hole measurements provide a link between surface measurements and well logs and can minimize the amount of drilling needed to locate an ore deposit. Accordingly, borehole geophysics will become an increasingly important evaluation tool as mineral exploration goes deeper.

Texas

A comparison of E. coli concentration estimates quantified by the EPA and a Michigan laboratory network using EPA Draft Method C

We evaluated data from 10 laboratories that analyzed water samples from 82 recreational water sites across the state of Michigan between 2016 and 2018. Water sample replicates were analyzed by experienced U.S. Environmental Protection Agency (EPA) analysts and Michigan laboratories personnel, many of whom were newly trained, using EPA Draft Method C—a rapid quantitative polymerase chain reaction (qPCR) technique that provides same day Escherichia coli ( E. coli ) concentration results. Beach management decisions (i.e. remain open or issue an advisory or closure) based on E. coli concentration estimates obtained by Michigan labs and by the EPA were compared; the beach management decision agreed in 94% of the samples analyzed. We used the Wilcoxon one-sample signed rank test and nonparametric quantile regression to assess (1) the degree of agreement between E. coli concentrations quantified by Michigan labs versus the EPA and (2) Michigan lab E. coli measurement precision, relative to EPA results, in different years and water body types. The median quantile regression curve for Michigan labs versus EPA approximated the 1:1 line of perfect agreement more closely as years progressed. Similarly, Michigan lab E. coli estimates precision also demonstrated yearly improvements. No meaningful difference was observed in the degree of association between Michigan lab and EPA E. coli concentration estimates for inland lake and Great Lakes samples (median regression curve average slopes 0.93 and 0.95, respectively). Overall, our study shows that properly trained laboratory personnel can perform Draft Method C to a degree comparable with experienced EPA analysts. This allows health departments that oversee recreational water quality monitoring to be confident in qPCR results generated by the local laboratories responsible for analyzing the water samples.

Journal of Microbiological Methods

Radiochemical separation of gold by amalgam exchange

A rapid and simple method for the radiochemical separation of gold after neutron activation. The technique is based on treatment with a dilute indium-gold amalgam, both chemical reduction and isotopic exchange being involved. The counting efficiency for 198 Au in small volumes of the amalgam is good. Few interferences occur and the method is applicable to clays, rocks, salts and metals. The possibility of determining silver, platinum and palladium by a similar method is mentioned.

Analytica Chimica Acta

A method for the concentration of fine-grained rutile (TiO2) from sediment and sedimentary rocks by chemical leaching

Quaternary marine sediment in the Gulf of Maine basins contains 0.7 to 1.0 wt percent TiO 2 (determined by X-ray fluorescence spectrometry). Most of this TiO 2 exists in the form of silt-size rutile crystals that are visible by using the petrographic microscope with transmitted light (Valentine and Commeau, 1990). The identification of rutile was confirmed by using a scanning electron microscope (SEM) equipped with an energy-dispersive X-ray spectrometer (EDS) system. To quantify the amount of TiO 2 in the sediment contributed by rutile and its polymorphs, anatase and brookite, it was necessary to eliminate as many of the other minerals as possible, especially titanium-bearing minerals such as ilmenite, ilmenomagnetite, biotite, hornblende, oyroxene, and sphene. We accomplished this by developing a method of chemical dissolution that removed the bulk of the raw material and left the TiO 2 minerals intact. Many methods using acids and bases have been developed over the years to dissolve rocks, minerals, and sediments for chemical analysis or to concentrate specific minerals (Dolcater et al., 1970; Church, 1971; Campbell, 1973, and the references cited therein). The method developed by Raman and Jackson (1965) to concentrate rutile and anatase in soils and sediments requires digesting the sample in concentrated hydrofluoric acid (HF) for 24 hours. However, Campbell (1973) found that digestion in HF for more than 2 hours results in a loss of anatase. The method of Dolcater et al. (1970) for concentrating titanium as a free oxide requires the use of hydrofluotitanic acid (H 2 TiF 6 ), which is difficult to find on the commercial market. The acid can be prepared by the reaction of concentrated HF (48%) with an excess of TiO 2 , but the procedure requires 36 hours to complete and should be attempted with caution because it is highly exothermic. Jackson (1979) provides a detailed method for digesting soils, but many of the recommended pretreatment steps employ sodium compounds such as sodium bicarbonate (NaHCO 3 ), sodium citrate (Na 3 C 6 H 5 O 7 -2H 2 O), and sodium dithionate (Na 2 S 2 O 4 ), which are used for the removal of calcium carbonate, iron oxides, and phosphates. In combining the methods of Dolcater and Jackson, sodium compounds must be thoroughly washed from the sample because they form sodium fluotitanate (Na 2 TiF 6 ) in the presence of hydrofluotitanic acid (Fig. 1K). French and Adams (1973) described an inexpensive method for decomposing silicates by HF digestion in polypropylene containers. Their technique was effective for a wide variety of rock types. However, it did not address the problem caused by the precipitation of insoluble fluorides, nor did it outline a procedure to concentrate any residue that remained. As no one method gave the results we required, we modified procedures described in the literature and developed a process that removes 96 to 98 wt percent of the raw sample material. The residue is composed of rutile and minor amounts of micro- and cryptocrystalline TiO 2 (Fig. 1A-J), barite (Fig. 1L), elemental carbon (coal), and insoluble fluorides (Fig. 1J). The fluorides precipitate during the decomposition of siliceous material in hydrofluoric acid (e.g., MgF 2 and MgAlF 5 -2.7H 2 O; Lanmyhr and Kringstad, 1966). Most of the sample analyzed by the method described were marine muds collected from the Gulf of Maine (Valentine and Commeau, 1990). The silt and clay fraction (up to 99 wt% of the sediment) is composed of clay minerals (chiefly illite-mica and chlorite), silt-size quartz and feldspar, and small crystals (2-12 um) of rutile and hematite. The bulk sediment samples contained an average of 2 to 3 wt percent CaCO 3 . Tiher samples analyzed include red and gray Carboniferous and Triassic sandstones and siltstones exposed around the Bay of Fundy region and Paleozoic sandstones, siltstones, and shales from northern Maine and New Brunswick. These rocks are probable sources for the fine-grained rutile found in the Gulf of Maine.

Economic Geology