Search USGSSearch

SEARCH · Search USGS

Results for “Journal of Applied Physics”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 73 records · Page 4Linked to original sources

Final project memorandum: sea-level rise modeling handbook: resource guide for resource managers, engineers, and scientists

Coastal wetlands of the Southeastern United States are undergoing retreat and migration from increasing tidal inundation and saltwater intrusion attributed to climate variability and sea-level rise. Much of the literature describing potential sea-level rise projections and modeling predictions are found in peer-reviewed academic journals or government technical reports largely suited to reading by other Ph.D. scientists who are more familiar or engaged in the climate change debate. Various sea-level rise and coastal wetland models have been developed and applied of different designs and scales of spatial and temporal complexity for predicting habitat and environmental change that have not heretofore been synthesized to aid natural resource managers of their utility and limitations. Training sessions were conducted with Federal land managers with U.S. Fish and Wildlife Service, National Park Service, and NOAA National Estuarine Research Reserves as well as state partners and nongovernmental organizations across the northern Gulf Coast from Florida to Texas to educate and to evaluate user needs and understanding of concepts, data, and modeling tools for projecting sea-level rise and its impact on coastal habitats and wildlife. As a result, this handbook was constructed from these training and feedback sessions with coastal managers and biologists of published decision-support tools and simulation models for sea-level rise and climate change assessments. A simplified tabular context was developed listing the various kinds of decision-support tools and ecological models along with criteria to distinguish the source, scale, and quality of information input and geographic data sets, physical and biological constraints and relationships, datum characteristics of water and land elevation components, utility options for setting sea-level rise and climate change scenarios, and ease or difficulty of storing, displaying, or interpreting model output. The handbook is designed to be a primer to understanding sea-level rise and a practical synthesis of the current state of knowledge and modeling tools as a resource guide for DOl land management needs and facilitating Landscape Conservation Cooperative (LCC) research and conservation initiatives.

Conference Paper

Detecting aseismic strain transients from seismicity data

Aseismic deformation transients such as fluid flow, magma migration, and slow slip can trigger changes in seismicity rate. We present a method that can detect these seismicity rate variations and utilize these anomalies to constrain the underlying variations in stressing rate. Because ordinary aftershock sequences often obscure changes in the background seismicity caused by aseismic processes, we combine the stochastic Epidemic Type Aftershock Sequence model that describes aftershock sequences well and the physically based rate‐ and state‐dependent friction seismicity model into a single seismicity rate model that models both aftershock activity and changes in background seismicity rate. We implement this model into a data assimilation algorithm that inverts seismicity catalogs to estimate space‐time variations in stressing rate. We evaluate the method using a synthetic catalog, and then apply it to a catalog of M ≥ 1.5 events that occurred in the Salton Trough from 1990 to 2009. We validate our stressing rate estimates by comparing them to estimates from a geodetically derived slip model for a large creep event on the Obsidian Buttes fault. The results demonstrate that our approach can identify large aseismic deformation transients in a multidecade long earthquake catalog and roughly constrain the absolute magnitude of the stressing rate transients. Our method can therefore provide a way to detect aseismic transients in regions where geodetic resolution in space or time is poor.

Journal of Geophysical Research B: Solid Earth

Assessment of a claimed ultra-low frequency electromagnetic (ULFEM) earthquake precursor

The rate of occurrence of anomalous ultra-low frequency electromagnetic (ULFEM) pulses has been claimed to have increased days to weeks prior to the M5.4 2007 and M4.0 2010 Alum Rock earthquakes. We re-examine the previously reported ultra-low frequency (ULF: 0.01–10 Hz) magnetic data recorded at a QuakeFinder site located 9 km from the earthquake hypocentre, and compare to data from a nearby Stanford-USGS site located 42 km from the hypocentre, to analyse the characteristics of the pulses and assess their origin. Using pulse definitions and pulse-counting algorithms analogous to those previously reported, we corroborate the increase in pulse counts before the 2007 Alum Rock earthquake at the QuakeFinder station, but we note that the number of pulses depends on chosen temporal and amplitude detection thresholds. These thresholds are arbitrary because we lack a clear physical model or basis for their selection. We do not see the same increase in pulse counts before the 2010 Alum Rock earthquake at the QuakeFinder or Stanford-USGS stations. In addition, the majority of pulses in the QuakeFinder data and Stanford-USGS data do not match temporally, indicating the pulses lack a common origin and are not from lightning or solar-driven ionospheric/magnetospheric disturbances. Our assessment of the temporal distribution of pulse counts shows pulse counts increase during peak human activity hours, suggesting these pulses result from local cultural noise and are not tectonic in origin. The many unknowns about the character and even existence of precursory earthquake pulses means that standard numerical and statistical tests cannot easily be applied. Yet here we show that exhaustive investigation of many different aspects of ULFEM signals can be used to properly characterize their origin.

California

Prioritizing conservation potential of arid-land montane natural springs and associated riparian areas

Using inventory data and input from natural resource professionals, we developed a classification system that categorizes conservation potential for montane natural springs. This system contains 18 classes based on the presence of a riparian patch, wetland species, surface water, and evidence of human activity. We measured physical and biological components of 276 montane springs in the Oscura Mountains above 1450 m and the San Andres Mountains above 1300 m in southern New Mexico. Two of the 18 classes were not represented during the inventory, indicating the system applies to conditions beyond the montane springs in our study area. The class type observed most often (73 springs) had a riparian patch, perennial surface water, and human evidence. We assessed our system in relation to 13 other wetland and riparian classification systems regarding approach, area of applicability, intended users, validation, ease of use, and examination of system response. Our classification can be used to rapidly assess priority of conservation potential for isolated riparian sites, especially springs, in arid landscapes. We recommend (1) including this classification in conservation planning, (2) removing deleterious structures from high-priority sites, and (3) assessing efficiency and use of this classification scheme elsewhere. ?? 2002 Elsevier Science Ltd.

Journal of Arid Environments

A model to locate potential areas for lake sturgeon spawning habitat construction in the St. Clair–Detroit River System

In response to a need for objective scientific information that could be used to help remediate loss of fish spawning habitat in the St. Clair River and Detroit River International Areas of Concern, this paper summarizes a large-scale geographic mapping investigation. Our study integrates data on two variables that many riverine fishes respond to in selecting where to spawn in these waters (water flow velocity and water depth) with available maps of the St. Clair–Detroit River System (SC–DRS). Our objectives were to locate and map these two physical components of fish habitat in the St. Clair and Detroit rivers and Lake St. Clair using a geographic information system (GIS) and to identify where, theoretically, fish spawning habitat could be remediated in these rivers. The target fish species to which this model applies is lake sturgeon (Acipenser fulvescens), but spawning reefs constructed for lake sturgeon in this system have been used for spawning by 17 species of fish. Our analysis revealed areas in each river that possessed suitable water velocity and depth for fish spawning and therefore could theoretically be remediated by the addition of rock-rubble substrate like that used at two previously remediated sites in the Detroit River at Belle Isle and Fighting Island. Results of our analysis revealed that only 3% of the total area of the SC–DRS possesses the necessary combination of water depth and high flow velocity to be indicated by the model as potential spawning habitat for lake sturgeon.

Michigan, Ontario

Impact of gas/liquid phase change of CO2 during injection for sequestration

CO 2 sequestration in deep saline formations is an effective and important process to control the rapid rise in CO 2 emissions. The process of injecting CO 2 requires reliable predictions of the stress in the formation and the fluid pressure distributions – particularly since monitoring of the CO 2 migration is difficult – to mitigate leakage, prevent induced seismicity, and analyze wellbore stability. A key aspect of CO 2 is the gas–liquid phase transition at the temperatures and pressures of relevance to leakage and sequestration, which has been recognized as being critical for accurate predictions but has been challenging to model without ad hoc empiricisms. This paper presents a robust multiphase thermodynamics-based poromechanics model to capture the complex phase transition behavior of CO 2 and predict the stress and pressure distribution under super- and sub- critical conditions during the injection process. A finite element implementation of the model is applied to analyze the behavior of a multiphase porous system with CO 2 as it displaces the fluid brine phase. We find that if CO 2 undergoes a phase transition in the geologic reservoir, the spatial variation of the density is significantly affected, and the migration mobility of CO 2 decreases in the reservoir. A key feature of our approach is that we do not a priori assume the location of the CO 2 gas/liquid interface – or even if it occurs at all – but rather, this is a prediction of the model, along with the spatial variation of the phase of CO 2 and the change of the saturation profile due to the phase change.

Journal of the Mechanics and Physics of Solids

Topography-aware registration refinement of Landsat 8/9 L1TP products with Sentinel-2 L1C and NAIP orthoimages

Satellite orthoimage products are widely available, yet residual geometric misregistration across independently processed products remains common, limiting their direct interoperability for multi-source and multi-temporal analysis. This paper introduces a residual Multi-Layer Perceptron (MLP)–based, topography-aware framework to further increase the registration quality of existing orthoimages based on dense matching without requiring any sensor-specific metadata or physical imaging parameters. We evaluate our approach by precisely co-registering 26 Landsat 8/9 Collection 2 Level-1 Terrain Precision (L1TP) scenes across Indiana (USA) and Berlin (Germany) with Sentinel-2 L1C and National Agriculture Imagery Program (NAIP) orthoimages. The baseline Landsat misregistration to Sentinel-2 or NAIP typically ranges from 3 to 10 m, which is reduced to 2–4 m after applying our MLP-based refinement, outperforming conventional polynomial and Rational Polynomial Coefficient (RPC) models. Further empirical evaluation demonstrates that consistent registration precision can be achieved across various terrain datasets; specifically, 30 m global digital elevation models (DEMs) yield comparable performance to that of high resolution (1–10 m) national or regional DEMs. The developed MLP approach provides a precise and reliable framework that transcends Landsat-specific tasks. It is readily adaptable to other registration applications requiring high-fidelity geometric alignment and consistent integration of heterogeneous image sources.

Indiana

Aquatic habitat measurement and valuation: imputing social benefits to instream flow levels

Instream flow conflicts have been analysed from the perspectives offered by policy oriented applied (physical) science, theories of conflict resolution and negotiation strategy, and psychological analyses of the behavior patterns of the bargaining parties. Economics also offers some useful insights in analysing conflict resolution within the context of these water allocation problems. We attempt to analyse the economics of the bargaining process in conjunction with a discussion of the water allocation process. In particular, we examine in detail the relation between certain habitat estimation techniques, and the socially optimal allocation of non-market resources. The results developed here describe the welfare implications implicit in the contemporary general equilibrium analysis of a competitive market economy. We also review certain currently available techniques for assigning dollar values to the social benefits of instream flow. The limitations of non-market valuation techniques with respect to estimating the benefits provided by instream flows and the aquatic habitat contingent on these flows should not deter resource managers from using economic analysis as a basic tool for settling instream flow conflicts.

Journal of Environmental Management

Estimating recharge at Yucca Mountain, Nevada, USA: Comparison of methods

Obtaining values of net infiltration, groundwater travel time, and recharge is necessary at the Yucca Mountain site, Nevada, USA, in order to evaluate the expected performance of a potential repository as a containment system for high-level radioactive waste. However, the geologic complexities of this site, its low precipitation and net infiltration, with numerous mechanisms operating simultaneously to move water through the system, provide many challenges for the estimation of the spatial distribution of recharge. A variety of methods appropriate for arid environments has been applied, including water-balance techniques, calculations using Darcy's law in the unsaturated zone, a soil-physics method applied to neutron-hole water-content data, inverse modeling of thermal profiles in boreholes extending through the thick unsaturated zone, chloride mass balance, atmospheric radionuclides, and empirical approaches. These methods indicate that near-surface infiltration rates at Yucca Mountain are highly variable in time and space, with local (point) values ranging from zero to several hundred millimeters per year. Spatially distributed net-infiltration values average 5 mm/year, with the highest values approaching 20 mm/year near Yucca Crest. Site-scale recharge estimates range from less than 1 to about 12 mm/year. These results have been incorporated into a site-scale model that has been calibrated using these data sets that reflect infiltration processes acting on highly variable temporal and spatial scales. The modeling study predicts highly non-uniform recharge at the water table, distributed significantly differently from the non-uniform infiltration pattern at the surface.

Hydrogeology Journal

A predictive risk model for electroshock-induced mortality of the endangered Cape Fear shiner

We evaluated the effects of a single electroshock on injury and mortality of hatchery-reared Cape Fear shiners Notropis mekistocholas (N = 517), an endangered cyprinid. Groups of 18-22 Cape Fear shiners were exposed to DC, 120-Hz pulsed DC (PDC), or 60-Hz PDC at voltage gradients of 1.1, 1.9, or 2.7 V/cm for 3 s. Mortality occurred only among fish exposed to 120-Hz PDC (25%) and DC (38%) applied at 2.7 V/cm. Because no mortality occurred in Cape Fear shiners exposed to 60-Hz PDC, this waveform was selected for further study of electroshock duration (3, 6, 12, 24, or 48 s) and voltage gradient (0.9, 1.6, or 2.3 V/cm). Most fish electroshocked in the experiments were immobilized (ceased swimming motion). No physical injury was detected by necropsy or radiography in any fish. Electroshock-induced mortality of Cape Fear shiners showed a strong multivariable relationship to voltage gradient, electroshock duration, and fish length. Fish subjected to 60-Hz PDC at 0.9 or 1.6 V/cm for 6 s experienced low mortality (<10%). Our results demonstrate that Cape Fear shiners can be immobilized by 60-Hz PDC electroshock without injury or significant risk of mortality. We propose that electrofishing may be safely used to sample similar small cyprinids, imperiled or otherwise, when electrofishers select an appropriate waveform (DC pulsed at 60-Hz or less) and use it judiciously (minimal exposure at, or below, the immobilization threshold).

North American Journal of Fisheries Management

A paired-laser photogrammetric method for in situ length measurement of benthic fishes

Photogrammetry, a technique to obtain measurements from photographs, may be a valid method for measuring lengths of rare, threatened, or endangered species. Photogrammetric methods of measurement are nonintrusive and reduce the possibility of physical damage or physiological stress associated with the capture and handling of individuals. We evaluated precision and accuracy of photogrammetric length measurements relative to board measurements of Greenside Darters Etheostoma blennioides and Variegate Darters E. variatum in an aquarium and applied photogrammetry in a field study of the Diamond Darter Crystallaria cincotta , a federally listed endangered species. Digital photographs were taken of each individual using a waterproof camera equipped with two parallel lasers. Photogrammetric length measurements were digitized with ImageJ software. Agreement between board and photogrammetric measurements were high for Greenside and Variegate darters. The magnitude of differences was small between direct and photogrammetric measurements, ranging from 0.6% to 3.1%, depending on the species measured and the type of measurement taken. These results support photogrammetry as a useful method for obtaining length measurements of benthic stream fishes. Photogrammetric methods allowed for length measurements and an assessment of length frequency of 199 Diamond Darters, informative data for management that could not be collected with conventional measuring-board methods.

North American Journal of Fisheries Management

Bayesian inversion of data from effusive volcanic eruptions using physics-based models: Application to Mount St. Helens 2004--2008

Physics-based models of volcanic eruptions can directly link magmatic processes with diverse, time-varying geophysical observations, and when used in an inverse procedure make it possible to bring all available information to bear on estimating properties of the volcanic system. We develop a technique for inverting geodetic, extrusive flux, and other types of data using a physics-based model of an effusive silicic volcanic eruption to estimate the geometry, pressure, depth, and volatile content of a magma chamber, and properties of the conduit linking the chamber to the surface. A Bayesian inverse formulation makes it possible to easily incorporate independent information into the inversion, such as petrologic estimates of melt water content, and yields probabilistic estimates for model parameters and other properties of the volcano. Probability distributions are sampled using a Markov-Chain Monte Carlo algorithm. We apply the technique using GPS and extrusion data from the 2004–2008 eruption of Mount St. Helens. In contrast to more traditional inversions such as those involving geodetic data alone in combination with kinematic forward models, this technique is able to provide constraint on properties of the magma, including its volatile content, and on the absolute volume and pressure of the magma chamber. Results suggest a large chamber of >40 km 3 with a centroid depth of 11–18 km and a dissolved water content at the top of the chamber of 2.6–4.9 wt%.

Washington

Induced earthquake families reveal distinctive evolutionary patterns near disposal wells

The timing of events in seismic sequences can provide insights into the physical processes controlling fault slip. In southern Kansas, the rate of earthquakes rose rapidly starting in 2013 following expansion of energy production into the area, demanding the disposal of large volumes of wastewater into deep wells. Seismicity catalogs that are complete to low magnitudes can provide insights into the physical processes that induce seismicity near wastewater disposal. We develop a catalog of over 130,000 earthquakes recorded in southern Kansas from mid‐March 2014 through December 2017 by applying a matched filter algorithm to an original catalog of 5,831 template earthquakes. Detections have nearly identical waveforms to their associated template event and represent slip on nearly co‐located sections of a fault. We select template events with at least 100 associated detections and examine the characteristics of these prolific families of earthquakes. We find that families located close (<10 km) to areas with significant volumes of injected fluids have near‐Poissonian interevent times and the families remain active over longer durations. Families farther from high‐volume injection wells show strong clustering of interevent times and shorter sequence durations. We conclude that increasing pore fluid pressures from nearby disposal of large volumes of wastewater is the primary driver of these long duration episodes, with earthquake‐earthquake interactions driving sequences at greater distance from the wells.

Kansas

Ionospheric current source modeling and global geomagnetic induction using ground geomagnetic observatory data

Long-period global-scale electromagnetic induction studies of deep Earth conductivity are based almost exclusively on magnetovariational methods and require accurate models of external source spatial structure. We describe approaches to inverting for both the external sources and three-dimensional (3-D) conductivity variations and apply these methods to long-period ( T ≥1.2 days) geomagnetic observatory data. Our scheme involves three steps: (1) Observatory data from 60 years (only partly overlapping and with many large gaps) are reduced and merged into dominant spatial modes using a scheme based on frequency domain principal components. (2) Resulting modes are inverted for corresponding external source spatial structure, using a simplified conductivity model with radial variations overlain by a two-dimensional thin sheet. The source inversion is regularized using a physically based source covariance, generated through superposition of correlated tilted zonal (quasi-dipole) current loops, representing ionospheric source complexity smoothed by Earth rotation. Free parameters in the source covariance model are tuned by a leave-one-out cross-validation scheme. (3) The estimated data modes are inverted for 3-D Earth conductivity, assuming the source excitation estimated in step 2. Together, these developments constitute key components in a practical scheme for simultaneous inversion of the catalogue of historical and modern observatory data for external source spatial structure and 3-D Earth conductivity.

Journal of Geophysical Research

Radiometric cross-calibration of EO-1 ALI with L7 ETM+ and Terra MODIS sensors using near-simultaneous desert observations

The Earth Observing-1 (EO-1) satellite was launched on November 21, 2000, as part of a one-year technology demonstration mission. The mission was extended because of the value it continued to add to the scientific community. EO-1 has now been operational for more than a decade, providing both multispectral and hyperspectral measurements. As part of the EO-1 mission, the Advanced Land Imager (ALI) sensor demonstrates a potential technological direction for the next generation of Landsat sensors. To evaluate the ALI sensor capabilities as a precursor to the Operational Land Imager (OLI) onboard the Landsat Data Continuity Mission (LDCM, or Landsat 8 after launch), its measured top-of-atmosphere (TOA) reflectances were compared to the well-calibrated Landsat 7 (L7) Enhanced Thematic Mapper Plus (ETM+) and the Terra Moderate Resolution Imaging Spectroradiometer (MODIS) sensors in the reflective solar bands (RSB). These three satellites operate in a near-polar, sun-synchronous orbit 705 km above the Earth's surface. EO-1 was designed to fly one minute behind L7 and approximately 30 minutes in front of Terra. In this configuration, all the three sensors can view near-identical ground targets with similar atmospheric, solar, and viewing conditions. However, because of the differences in the relative spectral response (RSR), the measured physical quantities can be significantly different while observing the same target. The cross-calibration of ALI with ETM+ and MODIS was performed using near-simultaneous surface observations based on image statistics from areas observed by these sensors over four desert sites (Libya 4, Mauritania 2, Arabia 1, and Sudan 1). The differences in the measured TOA reflectances due to RSR mismatches were compensated by using a spectral band adjustment factor (SBAF), which takes into account the spectral profile of the target and the RSR of each sensor. For this study, the spectral profile of the target comes from the near-simultaneous EO-1 Hyperion data over these sites. The results indicate that the TOA reflectance measurements for ALI agree with those of ETM+ and MODIS to within 5% after the application of SBAF.

Arabia

Borehole geophysical investigations in the south Texas uranium district

Contrasts of electrical properties between uranium deposits and their host rocks in South Texas are subtle. In places where deposits are small or deep, conventional geophysical well-logging techniques and hole-to-hole measurements may be the only practical method to detect changes in rock properties associated with the occurrence of uranium ore deposits. Two separate ore-producing areas in South Texas were chosen for studying borehole geophysical techniques applied to uranium-exploration problems. Extensive measurements of physical properties were made on cores and taken from holes where electrical-resistivity, induced-polarization and gamam-ray logs were run. These analyses show that: (1) induced-polarization anomalies are caused by a change in pyrite content and clay-sized material content and (2) resistivity anomalies are associated with a change in clay-sized material content and cementation. In addition to conventional borehole techniques, hole-to-hole induced-polarization and resistivity tests were made in South Texas. These measurements were made by placing a current source down one hole and a receiver cable down an adjacent hole whose separation ranged from 30 to 300 m and hole depths varied from 80 to 270 m. These tests show that hole-to-hole measurements can be used to detect changes in physical properties, associated with uranium ore, that occur between boreholes. Hole-to-hole measurements provide a link between surface measurements and well logs and can minimize the amount of drilling needed to locate an ore deposit. Accordingly, borehole geophysics will become an increasingly important evaluation tool as mineral exploration goes deeper.

Texas

Performance of bedload sediment transport formulas applied to the Lower Minnesota River

Despite limitations in reproducing complex bedload sediment transport processes in rivers, formulas have been preferred over collection and analysis of field data due to the high cost and time-consuming nature of bedload discharge measurements. However, the performance of such formulas depends on the hydraulic and sedimentological conditions they attempt to describe. The availability of field measurements provides a unique opportunity to test bedload transport formulas to better guide formula selection. Hydraulic parameters and bedload discharge data from the Lower Minnesota River and two of its tributaries were used to evaluate nine bedload transport formulas using three different indices. The bedload data for the different sites were collected by the United States Geological Survey (USGS) from 2011 through 2014, with bed material varying from very coarse to medium sand. The formulas calculated higher bedload rates than were measured due to a combination of site-specific physical characteristics, including the presence of bed forms (dunes), and sampling uncertainties. Because of the lack of reproducibility of the tested formulas, five power functions, based on the relation between the specific unit power (independent hydraulic variable) and the USGS measured data (dependent variable), were derived as provisional equations to estimate the bedload discharge on the Lower Minnesota River and tributaries.

Minnesota

Discriminating among Pacific salmon, Rainbow Trout, and Atlantic Salmon species using common genetic screening methods

The five most common species of Pacific salmon, Rainbow Trout (steelhead) Oncorhynchus spp., and Atlantic Salmon Salmo salar intermingle in the North Pacific Ocean and its freshwater tributaries. Efficient morphological methods for distinguishing among these species are sometimes limited by condition of the specimen (degraded or missing morphology), life history stage, or training of the observer. Researchers have successfully applied various genetic methods to distinguish among these species when morphological analyses are not possible, but they cannot easily incorporate these methods into standard fish and wildlife population monitoring analysis workflows. Here we test five 5′–3′ exonuclease (TaqMan) assays developed from mitochondrial genes and provide novel methods that take advantage of TaqMan output to distinguish among these species. We found that combinations of as few as two of the five assays were adequate to distinguish all species. TaqMan chemistry is designed to interrogate a single nucleotide locus. We also explore the basis for the variation in the observed scatter plot distributions (variation in florescent signals) and show that this variation is due to nucleotide diversity in and near the probe site. Because the SNPs underlying the assays developed here are all physically close to one another along the mitochondrial genome, the potential exists to develop a single DNA sequence-based assay to discriminate among salmon species. This single assay can be added to a genotyping-by-sequencing panel to identify and exclude nontarget species from analyses.

Journal of Fish and Wildlife Management