Search USGS⌕ Search

SEARCH · Search USGS

Results for “Ecosystems”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 685 records · Page 38Linked to original sources
USGS2022

Terrestrial ecosystem modeling with IBIS: Progress and future vision

Dynamic Global Vegetation Models (DGVM) are powerful tools for studying complicated ecosystem processes and global changes. This review article synthesizes the developments and applications of the Integrated Biosphere Simulator (IBIS), a DGVM, over the past two decades. IBIS has been used to evaluate carbon, nitrogen, and water cycling in terrestrial ecosystems, vegetation changes, land-atmosphere interactions, land-aquatic system integration, and climate change impacts. Here we summarize model development work since IBIS v2.5, covering hydrology (evapotranspiration, groundwater, lateral routing), vegetation dynamics (plant functional type, land cover change), plant physiology (phenology, photosynthesis, carbon allocation, growth), biogeochemistry (soil carbon and nitrogen processes, greenhouse gas emissions), impacts of natural disturbances (drought, insect damage, fire) and human induced land use changes, and computational improvements. We also summarize IBIS model applications around the world in evaluating ecosystem productivity, carbon and water budgets, water use efficiency, natural disturbance effects, and impacts of climate change and land use change on the carbon cycle. Based on this review, visions of future cross-scale, cross-landscape and cross-system model development and applications are discussed.

Journal of Resources and Ecology↗
USGS2020

Monitoring nearshore ecosystem health using Pacific razor clams (Siliqua patula) as an indicator species

An emerging approach to ecosystem monitoring involves the use of physiological biomarker analyses in combination with gene transcription assays. For the first time, we employed these tools to evaluate the Pacific razor clam ( Siliqua patula ), which is important both economically and ecologically, as a bioindicator species in the northeast Pacific. Our objectives were to (1) develop biomarker and gene transcription assays with which to monitor the health of the Pacific razor clam, (2) acquire baseline biomarker and gene transcription reference ranges for razor clams, (3) assess the relationship between physiological and gene transcription assays and (4) determine if site-level differences were present. Pacific razor clams were collected in July 2015 and 2016 at three sites within each of two national parks in southcentral Alaska. In addition to determining reference ranges, we found differences in biomarker assay and gene transcription results between parks and sites which indicate variation in both large-scale and local environmental conditions. Our intent is to employ these methods to evaluate Pacific razor clams as a bioindicator of nearshore ecosystem health. Links between the results of the biomarker and gene transcription assays were observed that support the applicability of both assays in ecosystem monitoring. However, we recognize the need for controlled studies to examine the range of responses in physiology and gene transcripts to different stressors. sors.

Alaska↗
USGS2004

Characteristics of urban-ecosystem atmosphere fluxes of CO2, CH4, N2O, and et over Denver, Colorado

The characteristics of urban ecosystems fluxes of carbon dioxide, methane, nitrous oxide, and evapotranspiration (ET) over Denver, Colorado were discussed. These atmospheric fluxes were measured using a methodology that included a combination of eddy covariance sensors at two levels on a tall tower and chamber measurements at 33 locations on the soil surface. There was both strong temporal and spatial heterogeneity of fluxes owing to characteristics of natural and anthropogenic ecosystem components. Although the urban ecosystem was a net carbon dioxide source, tower-based eddy covariance measurements showed it to be a net vegetative sink during the majority of mid-say summer hours.

Conference Paper↗
USGS2009

Linking ecosystem processes to sustainable wetland management

The sustainability of ecosystems has become an explicitly stated goal of many natural resource agencies. Examples of sustainable ecosystem management, however, are uncommon because management goals often focus on specific deliverables rather than the processes that sustain ecosystems.

National Wetlands Newsletter↗
USGS2011

Nine endangered taxa, one recovering ecosystem: Identifying common ground for recovery on Santa Cruz Island, California

It is not uncommon to have several rare and listed taxa occupying habitats in one landscape or management area where conservation amounts to defense against the possibility of further loss. It is uncommon and extremely exciting, however, to have several listed taxa occupying one island that is managed cooperatively for conservation and recovery. On Santa Cruz Island, the largest of the northern California island group in the Santa Barbara Channel, we have a golden opportunity to marry ecological knowledge and institutional "good will" in a field test of holistic rare plant conservation. Here, the last feral livestock have been removed, active weed control is underway, and management is focused on understanding and demonstrating system response to conservation management. Yet funding limitations still exist and we need to plan the most fiscally conservative and marketable approach to rare plant restoration. We still experience the tension between desirable quick results and the ecological pace of system recovery. Therefore, our research has focused on identifying fundamental constraints on species recovery at individual, demographic, habitat, and ecosystem levels, and then developing suites of actions that might be taken across taxa and landscapes. At the same time, we seek a performance middle ground that balances an institutional need for quick demonstration of hands-on positive results with a contrasting approach that allows ecosystem recovery to facilitate species recovery in the long term. We find that constraints vary across breeding systems, life-histories, and island locations. We take a hybrid approach in which we identify several actions that we can take now to enhance population size or habitat occupancy for some taxa by active restoration, while allowing others to recover at the pace of ecosystem change. We make our recommendations on the basis of data we have collected over the last decade, so that management is firmly grounded in ecological observation.

California↗
USGS2013

Natural ecosystems

Natural Ecosystems analyzes the association of observed changes in climate with changes in the geographic distributions and phenology (the timing of blossoms or migrations of birds) for Southwestern ecosystems and their species, portraying ecosystem disturbances—such as wildfires and outbreaks of forest pathogens—and carbon storage and release, in relation to climate change.

Book chapter↗
USGS2011

Sagebrush ecosystem conservation and management: Ecoregional assessment tools and models for the Wyoming Basins

The Wyoming Basins are one of the remaining strongholds of the sagebrush ecosystem. However, like most sagebrush habitats, threats to this region are numerous. This book adds to current knowledge about the regional status of the sagebrush ecosystem, the distribution of habitats, the threats to the ecosystem, and the influence of threats and habitat conditions on occurrence and abundance of sagebrush associated fauna and flora in the Wyoming Basins. Comprehensive methods are outlined for use in data collection and monitoring of wildlife and plant populations. Field and spatial data are integrated into a spatially explicit analytical framework to develop models of species occurrence and abundance for the egion. This book provides significant new information on distributions, abundances, and habitat relationships for a number of species of conservation concern that depend on sagebrush in the region. The tools and models presented in this book increase our understanding of impacts from land uses and can contribute to the development of comprehensive management and conservation strategies.

Wyoming↗
USGS2014

Using resistance and resilience concepts to reduce impacts of annual grasses and altered fire regimes on the sagebrush ecosystem and sage-grouse- A strategic multi-scale approach

This Report provides a strategic approach for conservation of sagebrush ecosystems and Greater Sage- Grouse (sage-grouse) that focuses specifically on habitat threats caused by invasive annual grasses and altered fire regimes. It uses information on factors that influence (1) sagebrush ecosystem resilience to disturbance and resistance to invasive annual grasses and (2) distribution, relative abundance, and persistence of sage-grouse populations to develop management strategies at both landscape and site scales. A sage-grouse habitat matrix links relative resilience and resistance of sagebrush ecosystems with sage-grouse habitat requirements for landscape cover of sagebrush to help decision makers assess risks and determine appropriate management strategies at landscape scales. Focal areas for management are assessed by overlaying matrix components with sage-grouse Priority Areas for Conservation (PACs), breeding bird densities, and specific habitat threats. Decision tools are discussed for determining the suitability of focal areas for treatment and the most appropriate management treatments.

Report↗
USGS2010

A complex-systems approach to predicting effects of sea level rise and nitrogen loading on nitrogen cycling in coastal wetland ecosystems

To effectively manage coastal ecosystems, we need an improvedunderstanding of how tidal marsh ecosystem services will respond to sea-level rise and increased nitrogen (N) loading to coastal areas. Here we review existing literature to better understand how these interacting perturbations s will likely impact N removal by tidal marshes. We propose that the keyy factors controlling long-term changes in N removal are plant-community changes, soil accretion rates, surface-subsurface flow paths, marsh geomorphology microbial communities, and substrates for microbial reactions. Feedbacks affecting relative elevations and sediment accretion ratess will serve as dominant controls on future N removal throughout the marsh. Given marsh persistence, we hypothesize that the processes dominating N removal will vary laterally across the marsh and longitudinallyalong the estuarine gradient. In salt marsh interiors, where nitrate reduction rates are often limited by delivery of nitrate to bacterial communities, reductions in groundwater discharge due to sea level rise may trigger a net reduction in N removal. In freshwater marshes, we expect a decreasee in N removal efficiency due to increased sulfide concentrations. Sulfide encroachment will increase the relative importance of dissimilatory nitrate reduction to ammonium and lead to greater bacterial nitrogen immobilization, ultimately resulting in an ecosystem that retains more N and is less effective at permanent N removal from the watershed. In contrast, we predict that sealevel–driven expansion of the tidal creek network and the degree of surface-subsurface exchange flux through tidal creek banks will result in greater N-removal efficiency from these locations.

Book chapter↗
USGS2015

Coastal and wetland ecosystems of the Chesapeake Bay watershed: Applying palynology to understand impacts of changing climate, sea level, and land use

The mid-Atlantic region and Chesapeake Bay watershed have been influenced by fluctuations in climate and sea level since the Cretaceous, and human alteration of the landscape began ~12,000 years ago, with greatest impacts since colonial times. Efforts to devise sustainable management strategies that maximize ecosystem services are integrating data from a range of scientific disciplines to understand how ecosystems and habitats respond to different climatic and environmental stressors. Palynology has played an important role in improving understanding of the impact of changing climate, sea level, and land use on local and regional vegetation. Additionally, palynological analyses have provided biostratigraphic control for surficial mapping efforts and documented agricultural activities of both Native American populations and European colonists. This field trip focuses on sites where palynological analyses have supported efforts to understand the impacts of changing climate and land use on the Chesapeake Bay ecosystem.

Chesapeake Bay watershed↗
USGS2010

Climate change, cranes, and temperate floodplain ecosystems

Floodplain ecosystems provide important habitat to cranes globally. Lateral, longitudinal, vertical, and temporal hydrologic connectivity in rivers is essential to maintaining the functions and values of these systems. Agricultural development, flood control, water diversions, dams, and other anthropogenic activities have greatly affected hydrologic connectivity of river systems worldwide and altered the functional capacity of these systems. Although the specific effects of climate change in any given area are unknown, increased intensity and frequency of flooding and droughts and increased air and water temperatures are among many potential effects that can act synergistically with existing human modifications in these systems to create even greater challenges in maintaining ecosystem productivity. In this paper, I review basic hydrologic and geomorphic processes of river systems and use three North American rivers (Guadalupe, Platte, and Rio Grande) that are important to cranes as case studies to illustrate the challenges facing managers tasked with balancing the needs of cranes and people in the face of an uncertain climatic future. Each river system has unique natural and anthropogenic characteristics that will affect conservation strategies. Mitigating the effects of climate change on river systems necessitates an understanding of river/floodplain/landscape linkages, which include people and their laws as well as existing floodplain ecosystem conditions.

Conference Paper↗
USGS2013

Impacts of land-use change to ecosystem services

Increasing human populations on the landscape and globe coincide with increasing demands for food, energy, and other natural resources, with generally negative impacts to wildlife habitat, air and water quality, and natural scenery. Here we define and describe the impacts of land-use change on ecosystem services – the services that ecosystems provide humans such as filtering air and water, providing food, resources, recreation, and esthetics. We show how the human footprint is rapidly expanding due to population growth, demand for resources, and globalization. Increased trade and transportation has brought all the continents back together, creating new challenges for conserving native species and ecosystems.

Book chapter↗
USGS2002

Distribution of grizzly bears in the Greater Yellowstone Ecosystem, 1990-2000

The Yellowstone grizzly bear ( Ursus arctos horribilis ) has been expanding its range during the past 2 decades and now occupies historic habitats that had been vacant. A current understanding of the distribution of grizzly bears within the ecosystem is useful in the recovery process and to help guide the state and federal land management agencies and state wildlife agencies of Idaho, Wyoming, and Montana as they prepare management plans. We used kernel estimators to develop distribution maps of occupied habitats based on initial sightings of unduplicated females (n = 300) with cubs-of-the-year, information from radiomarked bears (n = 105), and locations of conflicts, confrontations, and mortalities (n = 1,235). Although each data set was constrained by potential sampling bias, together they provided insight into areas within the Greater Yellowstone Ecosystem (GYE) currently occupied by grizzly bears. The current distribution (1990-2000) extends beyond the recovery zone identified in the U.S. Fish and Wildlife Service (USFWS) Recovery Plan. Range expansion is particularly evident in the southern portion of the ecosystem in Wyoming. A comparison of our results from the 1990s to previously published distribution maps show an approximate increase in occupied habitat of 48% and 34% from the 1970s and 1980s, respectively. We discuss data biases and problems implicit to the analysis.

Wyoming↗
USGS2002

Impacts of aquatic nonindigenous invasive species on the Lake Erie ecosystem

Lake Erie is particularly vulnerable to the introduction and establishment of aquatic nonindigenous invasive species (NIS) populations. A minimum of 144 aquatic NIS have been recorded in the Lake Erie basin including several species [e.g., Eurasian watermilfoil ( Myriophyllum spicatum ); zebra mussel ( Dreissena polymorpha ); quagga mussel (Dreissena bugensis); an amphipod (Echinogammarus ischnus); round goby (Neogobius melanostomus); and sea lamprey ( Petromyzon marinus )] that have had discernible impacts on the lake's ecology. NIS pose threats to the Lake Erie ecosystem for a variety of reasons including their ability to proliferate quickly, compete with native species, and transfer contaminants (e.g., PCBs) and disease through the food web. Six of the 14 beneficial use impairments listed in Annex 2 of the Great Lakes Water Quality Agreement are impaired in Lake Erie, in part as a result of the introduction of NIS. The Lake Erie Lakewide Management Plan (LaMP) has adopted an ecosystem approach to restore beneficial use impairments in the lake. Furthermore, a research consortium, known as the Lake Erie Millennium Network, is working alongside the LaMP, to address research problems regarding NIS, the loss of habitat, and the role of contaminants in the Lake Erie ecosystem.

Conference Paper↗
USGS1995

USGS supports ecosystem management in the San Francisco bay and delta

In the past several years, the Department of the Interior has ,l?laced particular emphasis on "ecosystem management" - the integration of scientific knowledge of ecological relationships with resource management practices to sustain ecological, cultural, and economic systems in broad habitat areas; eg., forest, desert, and aquatic habitats. The goal of ecosystem management is to understand the habitat requirements of many species and thereby assess the impact of a variety of human activities on regional biodiversity rather than to manage for individual species. In support of the management of the natural resources of San Francisco Bay and the delta, the USGS is augmenting its ongoing research program to provide additional research, monitoring, and assessment information and to improve the availability of that information. Following a workshop with resource and regulatory agency representatives, hosted by the USGS in early 1994, USGS researchers identified specific areas where existing and new scientific information could contribute to resolving some of the critical bay and delta land and aquatic management issues. The "ecosystems initiative" effort now underway addresses questions in three areas: Freshwater flow, including sediment and contaminant transport. Wetlands. Information and data access. Following is a brief description of activities being supported by this initiative.

Interagency Ecological Program Newsletter↗
USGS2014

Status of whitebarkpine in the Greater Yellowstone Ecosystem: A step-trend analysis comparing 2004-2007 to 2008-2011

Whitebark pine (Pinus albicaulis) is a foundation and keystone species in upper subalpine environments of the northern Rocky Mountains that strongly influences the biodiversity and productivity of high-elevation ecosystems (Tomback et al. 2001, Ellison et al. 2005). Throughout its historic range, whitebark pine has decreased significantly as a major component of high-elevation forests. As a result, it is critical to understand the challenges to whitebark pine—not only at the tree and stand level, but also as these factors influence the distribution of whitebark pine across the Greater Yellowstone Ecosystem (GYE). In 2003, the National Park Service (NPS) Greater Yellowstone Inventory & Monitoring Network identified whitebark pine as one of twelve significant natural resource indicators or vital signs to monitor (Jean et al. 2005, Fancy et al. 2009) and initiated a long-term, collaborative monitoring program. Partners in this effort include the U.S. Geological Survey, U.S. Forest Service, and Montana State University with representatives from each comprising the Greater Yellowstone Whitebark Pine Monitoring Working Group. The objectives of the monitoring program are to assess trends in (1) the proportion of live, whitebark pine trees (>1.4-m tall) infected with white pine blister rust (blister rust); (2) to document blister rust infection severity by the occurrence and location of persisting and new infections; (3) to determine mortality of whitebark pine trees and describe potential factors contributing to the death of trees; and (4) to assess the multiple components of the recruitment of understory whitebark pine into the reproductive population. In this report we summarize the past eight years (2004-2011) of whitebark pine status and trend monitoring in the GYE. Our study area encompasses six national forests (NF), two national parks (NP), as well as state and private lands in portions of Wyoming, Montana, and Idaho; this area is collectively described as the GYE here and in other studies. The sampling design is a probabilistic, twostage cluster design with stands of whitebark pine as the primary units and 10x50 m belt transects as the secondary units. Primary sampling units (stands) were selected randomly from a sample frame of approximately 10,770 mapped pure and mixed whitebark pine stands ≥2.0 hectares in the GYE (Dixon 1997, Landenburger 2012). From 2004 through 2007 (monitoring transect establishment or initial time-step), we established 176 permanent belt transects (secondary sampling units=176) in 150 whitebark pine stands and permanently marked approximately 4,740 individual trees >1.4 m tall to monitor long-term changes in blister rust infection and survival rates. Between 2008 and 2011 (revisit time-step), these same 176 transects were surveyed and again all previously tagged trees were observed for changes in blister rust infection and survival status. Objective 1. Using a combined ratio estimator, we estimated the proportion of live trees infected in the GYE in the initial time-step (2004-2007) to be 0.22 (0.031 SE). Following the completion of all surveys in the revisit time-step (2008-2011), we estimated the proportion of live trees infected with white pine blister rust as 0.23 (0.028 SE; Table 2). We detected no significant change in the proportion of trees infected in the GYE between the two time-steps. Objective 2. We documented blister rust canker locations as occurring in the canopy or bole. We compared changes in canker position between the initial time-step (2004-2007) and the revisit time-step (2008-2011) in order to assess changes in infection severity. This analysis included the 3,795 trees tagged during the initial time-step that were located and documented as alive at the end of the revisit time-step. At the end of the revisit time-step, we found 1,217 trees infected with blister rust. This includes the 287 newly tagged trees in the revisit time step of which 14 had documented infections. Of these 1,217 trees, 780 trees were infected with blister rust in both time steps. Trees with only canopy cankers made up approximately 43% (519 trees) of the total number of trees infected with blister rust at the end of the revisit time-step, while trees with only bole cankers comprised 20% (252 trees), and those with both canopy and bole cankers included 37% (446 trees) of the infected sample. A bole infection is considered to be more consequential than a canopy canker, as it compromises not only the overall longevity of the tree, but its functional capacity for reproductive output as well (Kendall and Arno 1990, Campbell and Antos 2000, McDonald and Hoff 2001, Schwandt and Kegley 2004). In addition to infection location, we also documented infection transition between the canopy and bole. Of the 780 live trees that were infected with blister rust in both time-steps, approximately 31% (242) maintained canopy cankers and 36% (281) retained bole infections at the end of the revisit time-step. Infection transition from canopy to bole occurred in 30% (234) of the revisit time-step trees while 3% (23) transitioned from bole to canopy infections during this period. Objective 3. To determine whitebark pine mortality, we resurveyed all belt transects to reassess the life status of permanently tagged trees >1.4 m tall. We compared the total number of live tagged trees recorded during monitoring transect establishment to the total number of resurveyed dead tagged trees recorded during the revisit time-step and identified all potential mortality-influencing conditions (blister rust, mountain pine beetle, fire and other). By the end of the revisit time-step, we observed a total of 975 dead tagged whitebark pine trees; using a ratio estimator, this represents a loss of approximately 20% (SE=4.35%) of the original live tagged tree population (GYWPMWG 2012). Objective 4. To investigate the proportion of live, reproducing tagged trees, we divided the total number of positively identified cone-bearing trees by the total number of live trees in the tagged tree sample at the end of the revisit time-step. To approximate the average density of recruitment trees per stand, trees ≤1.4 m tall were summed by stand (within the 500 m² transect area) and divided by the total number of stands. Reproducing trees made up approximately 24% (996 trees) of the total live tagged population at the end of the revisit time-step. Differentiating between whitebark pine and limber pine seedlings or saplings is problematic given the absence of cones or cone scars. Therefore, understory summaries as presented in this report may include individuals of both species when they are sympatric in a stand. The average density of small trees ≤1.4 m tall was 53 understory trees per 500 m². Raw counts of these understory individuals ranged from 0-635 small trees per belt transect. In addition, a total of 287 trees were added to the tagged tree population by the end of 2011. These newly tagged trees were individuals that upon subsequent revisits had reached a height of >1.4 m tall and subsequently added to the sample. Throughout the past decade in the GYE, monitoring has helped document shifts in whitebark pine forests; whitebark pine stands have been impacted by insect, pathogen, wildland fire, and other disturbance events. Blister rust infection is ubiquitous throughout the ecosystem and infection proportions are variable across the region. And while we have documented mortality of whitebark pine, we have also recorded considerable recruitment. We provide this first step-trend report as a quantifiable baseline for understanding the state of whitebark pine in the GYE. Many aspects of whitebark pine health are highly variable across the range of its distribution in the GYE. Through sustained implementation of the monitoring program, we will continue efforts to document and quantify whitebark pine forest dynamics as they arise under periodic upsurges in insect, pathogen, fire episodes, and climatic events in the GYE. Since its inception, this monitoring program perseveres as one of the only sustained longterm efforts conducted in the GYE with a singular purpose to track the health and status of this prominent keystone species.

Natural Resource Technical Report↗
USGS2012

Effects of land cover and regional climate variations on long-term spatiotemporal changes in sagebrush ecosystems

This research investigated the effects of climate and land cover change on variation in sagebrush ecosystems. We combined information of multi-year sagebrush distribution derived from multitemporal remote sensing imagery and climate data to study the variation patterns of sagebrush ecosystems under different potential disturbances. We found that less than 40% of sagebrush ecosystem changes involved abrupt changes directly caused by landscape transformations and over 60% of the variations involved gradual changes directly related to climatic perturbations. The primary increases in bare ground and declines in sagebrush vegetation abundance were significantly correlated with the 1996-2006 decreasing trend in annual precipitation.

GIScience and Remote Sensing↗
USGS2017

The Moquah Barrens Research Natural Area: Loss of a pine barrens ecosystem

The Moquah Barrens Research Natural Area (RNA) was established by the Chequamegon National Forest and the Lakes States Forest Experiment Station in 1935 with a research objective well-suited to the needs of the Forest Service and the scientific understanding of ecosystem function prevalent at the time of establishment. The original research plan was never implemented, which led to a joint Forest-Station decision in 1956 to disestablish the RNA. However, that decision was never implemented. A series of management decisions made after 1956 led to the loss of the pine barrens ecosystem originally encompassed by the RNA. This loss is not irretrievable and the work necessary to recover the original ecosystem is possible under existing RNA management guidelines. The experience of the Moquah Barrens RNA can be used by the Forest Service to improve overall management of the entire system of research natural areas. Two main areas of opportunity are identified: 1) implement an improved approach to managing official records associated with RNAs; and 2) adopt a management framework suitable for long-term ecological projects.

Wisconsin↗