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Processes influencing the transport and fate of contaminated sediments in the coastal ocean– Boston Harbor and Massachusetts Bay

Most of the major urban centers of the United States including Boston, New York, Washington, Chicago, New Orleans, Miami, Los Angeles, San Francisco, and Seattle—are on a coast (fig. 1.1). All of these cities discharge treated sewage effluent into adjacent waters. In 2000, 74 percent of the U.S. population lived within 200 kilometers (km) of the coast. Between 1980 and 2002, the population density in coastal communities increased approximately 4.5 times faster than in noncoastal areas of the U.S. (Perkins, 2004). More people generate larger volumes of wastes, increase the demands on wastewater treatment, expand the area of impervious land surfaces, and use more vehicles that contribute contaminants to street runoff. According to the National Coastal Condition Report II (U.S. Environmental Protection Agency, 2005a), on the basis of coastal habitat, water and sediment quality, benthic index, and fish tissue, the overall national coastal condition is only poor to fair and the overall coastal condition in the highly populated Northeast is poor. Scientific information helps managers to prioritize and regulate coastal-ocean uses that include recreation, commercial fishing, transportation, waste disposal, and critical habitat for marine organisms. These uses are often in conflict with each other and with environmental concerns. Developing a strategy for managing competing uses while maintaining sustainability of coastal resources requires scientific understanding of how the coastal ocean system behaves and how it responds to anthropogenic influences. This report provides a summary of a multidisciplinary research program designed to improve our understanding of the transport and fate of contaminants in Massachusetts coastal waters. Massachusetts Bay and Boston Harbor have been a focus of U.S. Geological Survey (USGS) research because they provide a diverse geographic setting for developing a scientific understanding of the geology, geochemistry, and oceanography of coastal systems in general. Scientific data from this region can also be used to inform decisions about important economic, environmental, and political issues. From the economic viewpoint, the annual value of tourism and shipping in Massachusetts and Cape Cod Bays is about $1.5 billion and $1.9 billion, respectively. Commercial and recreational fishing generates about $240 million per year in the same region (U.S. Environmental Protection Agency, 2005b). The environmental issue is the 300-year history of waste discharge from the Boston metropolitan area into the harbor. This history is punctuated by cycles of environmental degradation, public outcry, and improvements in the sewage treatment system. With each improvement, however, the continuous growth of population in greater Boston (fig. 1.2) and the resulting increase in the volume of waste exceeded the capacity of the treatment system, thereby setting the stage for a new contamination crisis. By the 1980s, the levels of contaminants in sediments of Boston Harbor were among the highest in the nation (National Oceanic and Atmospheric Administration, 1987). Fish were diseased, shellfish beds were closed, and swimming beaches were unsafe after heavy rains; in general, water quality and aesthetics were below acceptable standards. Legal and political issues have always been part of Boston Harbor’s history. The environmental conditions in the 1980s were highlighted in a 1983 legal suit brought by the city of Quincy against the Metropolitan District Commission (MDC, the state agency responsible for sewage treatment) and heads of three state agencies for discharging untreated or poorly treated sewage into the harbor (Dolin, 2004). The suit never went to trial, but through the actions of a Massachusetts Superior Court, the issue of Boston Harbor contamination remained on the political and public agenda. The judge called the harbor “unsafe, unsanitary, indecent, in violation of the law (Clean Water Act), and a danger to the health and welfare of the people” (Forman, 1984). To force the state legislature to implement a plan to improve harbor conditions, the judge threatened to place the MDC in receivership and curtail new sewage hookups for industry. Under intense lobbying by business, the legislature created the Massachusetts Water Resources Authority (MWRA) in December 1984. The independent MWRA was established to manage Boston’s waste treatment system and was given the authority to float bonds to pay for major improvements in the treatment system. In 1985, a Federal court began hearings on a suit brought by the Conservation Law Foundation, the Environmental Protection Agency (USEPA), and towns of Quincy and Winthrop against the MDC and MWRA (as heir to responsibilities of the MDC) for years of violation of the Clean Water Act. The judge ruled against the defendants and required all the parties to submit a construction plan and schedule for a new sewage treatment system. From these submissions, he developed a schedule for treatment system upgrades that would give the “citizens of this commonwealth a public assurance that Boston Harbor will be cleaned up within a defined period of time” (Dolin, 2004). The MWRA’s Boston Harbor cleanup program (Levy and Connor, 1992) has transformed the Boston sewage system. Key improvements were to (1) reduce contaminants at the industrial source; (2) remediate leaks in the sewage-collection system; (3) eliminate sewage sludge discharge to the harbor; (4) upgrade sewage treatment from primary to secondary; (5) construct a new ocean outfall 15.2 km offshore in Massachusetts Bay for discharge of treated effluent (fig. 1.3); and (6) implement improvements in the combined-sewer-overflow system. As part of the harbor cleanup program, the MWRA developed a comprehensive monitoring program (summarized in MWRA, 2004) to assess changes in the harbor and bays that specifically related to the new sewage system. Additional information about conditions and processes in the coastal system on a regional scale and over a long time period was and continues to be important in predicting and interpreting local change. Implementation of the MWRA’s program and the mission of the USGS to understand the geology of the nation’s offshore waters provided an opportunity to conduct a cooperative multidisciplinary research program. This USGS program addresses basic scientific questions as well as concerns raised by management regarding the design, implementation, and assessment of the new sewage treatment system. Already active in Boston Harbor during the late 1970s, the USGS expanded research into Massachusetts Bay with a multidisciplinary program in 1989.

Massachusetts

Distinguishing values from science in decision making: Setting harvest quotas for mountain lions in Montana

The relative roles of science and human values can be difficult to distinguish when informal processes are used to make complex and contentious decisions in wildlife management. Structured Decision Making (SDM) offers a formal process for making such decisions, where scientific results and concepts can be disentangled from the values of differing stakeholders. We used SDM to formally integrate science and human values for a citizen working group of ungulate hunting advocates, lion hunting advocates, and outfitters convened to address the contentious allocation of harvest quotas for mountain lions ( Puma concolor ) in west‐central Montana, USA, during 2014. A science team consisting of mountain lion biologists and population ecologists convened to support the working group. The science team used integrated population models that incorporated 4 estimates of mountain lion density to estimate population trajectories for 5 alternative harvest quotas developed by the working group. Results of the modeling predicted that effects of each harvest quota were consistent across the 4 density estimates; harvest quotas affected predicted population trajectories for 5 years after implementation but differences were not strong. Based on these results, the focus of the working group changed to differences in values among stakeholders that were the true impediment to allocating harvest quotas. By distinguishing roles of science and human values in this process, the working group was able to collaboratively recommend a compromise solution. This solution differed little from the status quo that had been the focus of debate, but the SDM process produced understanding and buy‐in among stakeholders involved, reducing disagreements, misunderstanding, and unproductive arguments founded on informal application of scientific data and concepts. Whereas investments involved in conducting SDM may be unnecessary for many decisions in wildlife management, the investment may be beneficial for complex, contentious, and multiobjective decisions that integrate science and human values.

Montana

Sea otters in captivity: applications and implications of husbandry development, public display, scientific research and management, and rescue and rehabilitation for sea otter conservation

Studies of sea otters in captivity began in 1932, producing important insights for conservation. Soviet (initiated in 1932) and United States (1951) studies provided information on captive otter husbandry, setting the stage for eventual large-scale translocations as tools for population restoration. Early studies also informed effective housing of animals in zoos and aquaria, with sea otters first publicly displayed in 1954. Surveys credited displayed otters in convincing the public of conservation values. After early studies, initial scientific data for captive sea otters in aquaria came from work initiated in 1956, and from dedicated research facilities beginning in 1968. Significant achievements have been made in studies of behavior, physiology, reproduction, and high-priority management issues. Larger-scale projects involving translocation and oil spill response provided extensive insights into stress reactions, water quality issues in captivity, and effects of oil spills.

Book chapter

Continental shelf GIS for the Monterey Bay National Marine Sanctuary

A marine sanctuary is an environment where the interests of science and society meet. Land and marine managers need access to the best scientific data available that describe the environment and environmental processes in sanctuaries. The sidescan sonar imagery, bathymetry, sample analyses and other data discussed in the papers in this volume have been made available as a U.S. Geological Survey CDROM publication. ?? 2002 Elsevier Science B.V. All rights reserved.

Marine Geology

Science deficiency in conservation practice: the monitoring of tiger populations in India

Conservation practices are supposed to get refined by advancing scientific knowledge. We study this phenomenon in the context of monitoring tiger populations in India, by evaluating the 'pugmark census method' employed by wildlife managers for three decades. We use an analytical framework of modem animal population sampling to test the efficacy of the pugmark censuses using scientific data on tigers and our field observations. We identify three critical goals for monitoring tiger populations, in order of increasing sophistication: (1) distribution mapping, (2) tracking relative abundance, (3) estimation of absolute abundance. We demonstrate that the present census-based paradigm does not work because it ignores the first two simpler goals, and targets, but fails to achieve, the most difficult third goal. We point out the utility and ready availability of alternative monitoring paradigms that deal with the central problems of spatial sampling and observability. We propose an alternative sampling-based approach that can be tailored to meet practical needs of tiger monitoring at different levels of refinement.

Animal Conservation

Rejuvenating Pre-GPS era geophysical surveys using The National Map

Old geophysical surveys [pre–Global Positioning System (GPS)] stand as valuable, largely untapped sources of scientific data. If data from these surveys were in a format that had reasonable accuracy, availability, and ease of access, they could be more widely used. In this paper, a pre-GPS survey is integrated into a modern geographic database, in this case, The National Map (TNM). The ultimate goal is to improve the accuracy, precision, provenance, and ease of access of the geospatial components of archived geophysical data. An unique set of data sources was assembled for this purpose. A comparison of these different data sources indicates that more than 80% of stations were positioned on The National Map within 15 m (horizontal) and 2 m (vertical) of the GPS-derived coordinates for each station within the survey. Although online database coordinate accuracy continues to improve, these results imply that web databases have already matured to a point where it is possible to integrate pre-GPS era survey coordinate data with reasonable positional accuracy.

Missouri

Systems approaches for coastal hazard assessment and resilience

The framework presented herein supports a changing paradigm in the approaches used by coastal researchers, engineers, and social scientists to model the impacts of climate change and sea level rise (SLR) in particular along low-gradient coastal landscapes. Use of a System of Systems (SoS) approach to the coastal dynamics of SLR is encouraged to capture the nonlinear feedbacks and dynamic responses of the bio-geo-physical coastal environment to SLR, while assessing the social, economic, and ecologic impacts. The SoS approach divides the coastal environment into smaller subsystems such as morphology, ecology, and hydrodynamics. Integrated models are used to assess the dynamic responses of subsystems to SLR; these models account for complex interactions and feedbacks among individual systems, which provides a more comprehensive evaluation of the future of the coastal system as a whole. Results from the integrated models can be used to inform economic services valuations, in which economic activity is connected back to bio-geo-physical changes in the environment due to SLR by identifying changes in the coastal subsystems, linking them to the understanding of the economic system and assessing the direct and indirect impacts to the economy. These assessments can be translated from scientific data to application through various stakeholder engagement mechanisms, which provide useful feedback for accountability as well as benchmarks and diagnostic insights for future planning. This allows regional and local coastal managers to create more comprehensive policies to reduce the risks associated with future SLR and enhance coastal resilience.

Book chapter

The contribution of road-based citizen science to the conservation of pond-breeding amphibians

Roadside amphibian citizen science (CS) programmes bring together volunteers focused on collecting scientific data while working to mitigate population declines by reducing road mortality of pond‐breeding amphibians. Despite the international popularity of these movement‐based, roadside conservation efforts (i.e. “big nights,” “bucket brigades” and “toad patrols”), direct benefits to conservation have rarely been quantified or evaluated. As a case study, we used a population simulation approach to evaluate how volunteer intensity, frequency and distribution influence three conservation outcomes (minimum population size, population growth rate and years to extinction) of the spotted salamander ( Ambystoma maculatum ), often a focal pond‐breeding amphibian of CS and conservation programmes in the United States. Sensitivity analysis supported the expectation that spotted salamander populations were primarily recruitment‐driven. Thus, conservation outcomes were highest when volunteers focused on metamorph outmigration as opposed to adult in‐migration—contrary to the typical timing of such volunteer events. Almost every volunteer strategy resulted in increased conservation outcomes compared to a no‐volunteer strategy. Specifically, volunteer frequency during metamorph migration increased outcomes more than the same increases in volunteer effort during adult migration. Small population sizes resulted in a negligible effect of volunteer intensity. Volunteers during the first adult in‐migration had a relatively small effect compared to most other strategies. Synthesis and applications . Although citizen science (CS)‐focused conservation actions could directly benefit declining populations, additional conservation measures are needed to halt or reverse local amphibian declines. This study demonstrates a need to evaluate the effectiveness of focusing CS mitigation efforts on the metamorph stage, as opposed to the adult stage. This may be challenging, compared to other management actions such as road‐crossing infrastructure. Current amphibian CS programmes will be challenged to balance implementing evidence‐based conservation measures on the most limiting life stage, while retaining social and community benefits for volunteers.

Journal of Applied Ecology

Traceable Radiometry Underpinning Terrestrial- and Helio- Studies (TRUTHS)

The Traceable Radiometry Underpinning Terrestrial- and Helio- Studies (TRUTHS) mission offers a novel approach to the provision of key scientific data with unprecedented radiometric accuracy for Earth Observation (EO) and solar studies, which will also establish well-calibrated reference targets/standards to support other EO missions. This paper will present the TRUTHS mission and its objectives. TRUTHS will be the first satellite mission to calibrate its instrumentation directly to SI in orbit, overcoming the usual uncertainties associated with drifts of sensor gain and spectral shape by using an electrical rather than an optical standard as the basis of its calibration. The range of instruments flown as part of the payload will also provide accurate input data to improve atmospheric radiative transfer codes by anchoring boundary conditions, through simultaneous measurements of aerosols, particulates and radiances at various heights. Therefore, TRUTHS will significantly improve the performance and accuracy of Earth observation missions with broad global or operational aims, as well as more dedicated missions. The provision of reference standards will also improve synergy between missions by reducing errors due to different calibration biases and offer cost reductions for future missions by reducing the demands for on-board calibration systems. Such improvements are important for the future success of strategies such as Global Monitoring for Environment and Security (GMES) and the implementation and monitoring of international treaties such as the Kyoto Protocol. TRUTHS will achieve these aims by measuring the geophysical variables of solar and lunar irradiance, together with both polarised and un-polarised spectral radiance of the Moon, and the Earth and its atmosphere.

Conference Paper

INHABIT: A web-based decision support tool for invasive plant species habitat visualization and assessment across the contiguous United States

Narrowing the communication and knowledge gap between producers and users of scientific data is a longstanding problem in ecological conservation and land management. Decision support tools (DSTs), including websites or interactive web applications, provide platforms that can help bridge this gap. DSTs can most effectively disseminate and translate research results when producers and users collaboratively and iteratively design content and features. One data resource seldom incorporated into DSTs are species distribution models (SDMs), which can produce spatial predictions of habitat suitability. Outputs from SDMs can inform management decisions, but their complexity and inaccessibility can limit their use by resource managers or policy makers. To overcome these limitations, we present the Invasive Species Habitat Tool (INHABIT), a novel, web-based DST built with R Shiny to display spatial predictions and tabular summaries of habitat suitability from SDMs for invasive plants across the contiguous United States. INHABIT provides actionable science to support the prevention and management of invasive species. Two case studies demonstrate the important role of end user feedback in confirming INHABIT’s credibility, utility, and relevance.

PLoSOne

Leveraging existing technology: Developing a trusted digital repository for the U.S. Geological Survey

As Federal Government agencies in the United States pivot to increase access to scientific data (Sheehan, 2016), the U.S. Geological Survey (USGS) has made substantial progress (Kriesberg et al., 2017). USGS authors are required to make federally funded data publicly available in an approved data repository (USGS, 2016b). This type of public data product, known as a USGS data release, serves as a method for publishing reviewed and approved data. In this paper, we present major milestones in the approach the USGS took to transition an existing technology platform to a Trusted Digital Repository. We describe both the technical and the non-technical actions that contributed to a successful outcome.We highlight how initial workflows revealed patterns that were later automated, and the ways in which assessments and user feedback influenced design and implementation. The paper concludes with lessons learned, such as the importance of a community of practice, application programming interface (API)-driven technologies, iterative development, and user-centered design. This paper is intended to offer a potential roadmap for organizations pursuing similar goals.

International Journal of Digital Curation

Freedom of Information Act

The Freedom of Information Act( FOIA), 5 U.S.C.§ 552, as amended, generally provides that any person has a right to request access to Federal agency records. The USGS proactively promotes information disclosure as inherent to its mission of providing objective science to inform decisionmakers and the general public. USGS scientists disseminate up-to-date and historical scientific data that are critical to addressing national and global priorities.

General Information Product

Sand and gravel resources of Puerto Rico

Many of Puerto Rico's beaches are eroding, and though rates of erosion vary, it is a major concern for the tourism and residential development industries. More than 85 percent of the population lives within 7 kilometers of the coast and they are heavily dependent on tourists that are attracted by the island's beaches and coral reefs. High-quality scientific data are needed to help formulate public policy regarding residential and commercial construction along the coast, beach replenishment, and future use of marine resources. Scientists have long recognized that the causes of coastal land loss are not limited to a relative rise in sea level, but can be manmade as well. For example, sediment supply to beaches especially along the north shore of Puerto Rico has been strongly affected by upstream river channeling, dam construction, various agricultural practices, paving and urbanization, as well as shallow-water oceanographic processes. The response to coastal erosion in Puerto Rico has been mostly crisis based leading to engineered solutions that have a negative effect on the coastal environment.

Puerto Rico

The U.S. Geological Survey Volcano Science Center’s response plan for significant volcanic events

This publication describes the U.S. Geological Survey Volcano Science Center (VSC) Response Plan for Significant Volcanic Events (hereinafter referred to as “the plan”) that has been developed for U.S volcano observatories over the past several years in consultation with the lead scientist, or Scientist-in-Charge (SIC), of each of the five U.S. Geological Survey (USGS) volcano observatories. The goal of the plan is to define a standardized management system that ensures the VSC can achieve the following during a volcanic crisis: maintain situational awareness and issue timely warnings and hazard assessments, fulfill internal and external agency requests for information as well as requests from the public, sustain financial and technical support, and gather critical scientific data. The plan addresses situations in which the scale of a response at least temporarily eclipses the response capabilities of a single observatory. The plan features two integrated response structures for managing and carrying out operations within the VSC during a crisis: the Observatory Volcanic Event Response Team (OVERT) and the Center Volcanic Event Response Team (CVERT). The design of these structures reflects lessons learned from past volcanic responses and is influenced by the Incident Command System used by the U.S. Federal Government for managing emergency responses. The plan clarifies expectations regarding the flow of information during a response, summarizes required tasks of the responding observatory and VSC to ensure a successful response, defines response-team roles and responsibilities, and describes the internal communication practices critical for an effective and coordinated response.

Circular

Geology of the Woods Hole area, Massachusetts; the story behind the landscape

The geologic story of the Woods Hole area, Cape Cod, Mass., was written by glacial ice during the last ice age and edited by the ocean waves. If you learn to read today's landscape, you can see the fascinating history it records. The features of Cape Cod, from the ponds and cranberry bogs to the gently sloping sandy uplands and rocky, irregular hills to the beaches, result from the glacial processes that built the cape and the marine processes that still shape it. Many geologists since the late 19th century have contributed to telling this story. The U.S. Geological Survey has studied the geology of Cape Cod in order to provide people with objective scientific data that can be applied to wise stewardship of the land and coasts.

Fact Sheet

USGS Scientific Visualization Laboratory

The U.S. Geological Survey's (USGS) Scientific Visualization Laboratory at the National Center in Reston, Va., provides a central facility where USGS employees can use state-of-the-art equipment for projects ranging from presentation graphics preparation to complex visual representations of scientific data. Equipment including color printers, black-and-white and color scanners, film recorders, video equipment, and DOS, Apple Macintosh, and UNIX platforms with software are available for both technical and nontechnical users. The laboratory staff provides assistance and demonstrations in the use of the hardware and software products.

Fact Sheet

Addressing stakeholder science needs for integrated drought science in the Colorado River Basin

Stakeholders need scientific data, analysis, and predictions of how drought the will impact the Colorado River Basin in a format that is continuously updated, intuitive, and easily accessible. The Colorado River Basin Actionable and Strategic Integrated Science and Technology Pilot Project was formed to demonstrate the effectiveness of addressing complex problems through stakeholder involvement and use of 21st century technology to deliver integrated science. By identifying stakeholders and their science needs, the project team is better able to prioritize integrated science and design science delivery systems to support better adaptation and management measures for the long-term drought occurring in this basin. The project team is conducting outreach and coordination with stakeholders to meet the current and future science and technology needs in the basin and fulfill the USGS vision of integrated drought science throughout the Basin. As the USGS works to streamline the approach for sharing integrated drought science in the Colorado River Basin, the project is looking for input, involvement, and collaboration to ensure the science provided works for stakeholders.

Arizona, Colorado, Nevada, New Mexico, Utah, Wyomi

Freedom of Information Act-Employee responsibilities

The Freedom of Information Act( FOIA), 5 U.S.C. § 552, as amended, generally provides that any person has a right to request access to Federal agency records. The USGS proactively promotes information disclosure as inherent to its mission of providing objective science to inform decisionmakers and the general public. USGS scientists disseminate up-to-date and historical scientific data that are critical to addressing national and global priorities.

General Information Product