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At least 55 records · Page 3Linked to original sources
USGS2025

Salinas Valley integrated hydrologic and reservoir operations models, Monterey and San Luis Obispo Counties, California

The area surrounding the Salinas Valley groundwater basin in Monterey and San Luis Obispo Counties of California is a highly productive agricultural area, contributes significantly to the local economy, and provides a substantial portion of vegetables and other agricultural commodities to the Nation. This region of California provides about half of the Nation’s lettuce, celery, broccoli, and spinach each year. Thus, this agricultural area provides significant volumes of agricultural products not just for California but the entire United States. Changes in population and increased agricultural development, which includes a shift toward more water-intensive crops, and climate variability, have put increasing demand on both surface water and groundwater resources in the valley. This has resulted in water management challenges in the Salinas Valley that are predominantly related to distribution of water supply throughout the basin. Where and when the water is present in the surface and subsurface does not coincide with where and when the water is needed. To deal with the distribution issue, historically water has been used conjunctively in the valley. Conjunctive use is a water management strategy that coordinates surface water and groundwater use to maximize water availability. Groundwater is used throughout the Salinas Valley to meet water demands when surface water supplies are insufficient. Availability of surface water is constrained by climate. Precipitation and streamflow vary seasonally and year to year. Although there are two reservoirs in the Salinas Valley to capture and store water during wet periods, the only conveyance of reservoir water to coastal agricultural areas is the Salinas River. Increasing demand on groundwater and surface water resources throughout the Salinas Valley has resulted in undesirable effects of unsustainable water use, such as surface water depletion, groundwater level declines, storage depletion in the principal aquifers, and seawater intrusion. To address these escalating issues, local communities, water management agencies, and groundwater sustainability agencies are evaluating how to sustainably manage both their surface water and groundwater resources. To meet water demands and reduce undesirable effects of unsustainable water use, continued conjunctive management of surface water and groundwater would ideally incorporate strategies to deal with increases in demand and a variable climate. To evaluate the challenging water management issues in the Salinas Valley, the U.S. Geological Survey, Monterey County Water Resource Agency, and the Salinas Valley Basin Groundwater Sustainability Agency developed a comprehensive suite of models that represent the Salinas Valley Hydrogeologic system called the Salinas Valley System Model. The Salinas Valley Geologic Framework was developed to characterize the subsurface using various topographic and geologic data sources, including information on hydrogeologic units, their surfaces and extents, geologic structures, lithology, and elevations from borehole data and cross sections, as well as details on faults and existing models. The Salinas Valley Watershed Model simulates the entire Salinas River watershed. Monthly surface water inflows into the integrated hydrologic model domain were simulated using the Salinas Valley Watershed Model. The historical model uses historical climate data, water and land use data, and reservoir releases to simulate agricultural operations, including landscape water demands, diversions, and reclaimed wastewater. The operational model adds an embedded reservoir operations framework to the simulation of the historical model that allows specified operational rules to simulate reservoir releases and changes in reservoir storage. The operational model assumes current reservoir operations and constant land use, which differs from historical conditions. Thus, the operational model is a hypothetical baseline model that can be used by local water managers to evaluate and quantify potential benefits of water supply projects. Together, the geologic framework, watershed, historical, and operational models form a tool that can be used to simulate irrigated agriculture and associated reservoir operations of the integrated hydrologic system of the Salinas Valley.

EarthArXiv↗
USGS2026

Salinas Valley integrated hydrologic and reservoir operations models, Monterey and San Luis Obispo Counties, California

The area surrounding the Salinas Valley groundwater basin in Monterey and San Luis Obispo Counties of California is a highly productive agricultural area, contributes substantially to the local economy, and provides a substantial portion of vegetables and other agricultural commodities to the Nation. This region of California provides about half of the Nation’s lettuce, celery, broccoli, and spinach each year. Thus, this agricultural area provides substantial volumes of agricultural products not just for California but for the United States. Changes in population and increased agricultural development, which includes a shift toward more water-intensive crops, and climate variability, have put increasing demand on both surface-water and groundwater resources in the valley. This situation has resulted in water management challenges in the Salinas Valley that generally relate to the distribution of the water supply throughout the basin. Where and when the water is present in the surface and subsurface does not coincide with where and when the water is needed. Historically, to deal with the distribution issue, water has been used conjunctively in the valley. Conjunctive use is a water management strategy that coordinates surface-water and groundwater use to maximize water availability. Groundwater is used throughout the Salinas Valley to meet water demands when surface-water supplies are insufficient. The availability of surface water is constrained by climate. Precipitation and streamflow vary seasonally and year to year. Although there are two reservoirs in the Salinas Valley to capture and store water during wet periods, the only conveyance of reservoir water to coastal agricultural areas is the Salinas River. Increasing demand for groundwater and surface-water resources throughout the Salinas Valley has resulted in undesirable effects from unsustainable water use, such as surface-water depletion, groundwater-level declines, storage depletion in the principal aquifers, and seawater intrusion. To address these escalating issues, local communities, water management agencies, and groundwater sustainability agencies are evaluating how to sustainably manage both their surface-water and groundwater resources. To meet water demands and reduce the undesirable effects of unsustainable water use, continued conjunctive management of surface water and groundwater would ideally incorporate strategies to deal with increases in demand and climate variability. To evaluate the challenging water management issues in the Salinas Valley, the U.S. Geological Survey, Monterey County Water Resources Agency, and the Salinas Valley Basin Groundwater Sustainability Agency developed a comprehensive suite of models that represent the Salinas Valley hydrogeologic system called the Salinas Valley System Model. The geologic framework is known as the Salinas Valley Geologic Framework and was developed to characterize the subsurface using various topographic and geologic data sources, including information on hydrogeologic units, their surfaces and extents, geologic structures, lithology, and elevations from borehole data and cross sections, as well as details on faults and existing models. The surface-water model is called the Salinas Valley Watershed Model and simulates the Salinas River watershed. Monthly surface-water inflows into the integrated hydrologic model domain were simulated using the Salinas Valley Watershed Model. The historical model uses historical climate data, water and land use data, and reservoir releases to simulate agricultural operations, including landscape water demands, diversions, and reclaimed wastewater. The operational model adds an embedded reservoir operations framework to the simulation of the historical model that allows specified operational rules to simulate reservoir releases and changes in reservoir storage. The operational model assumes current reservoir operations and constant land use, which differs from historical conditions. Thus, the operational model is a hypothetical baseline model that can be used by local water managers to evaluate and quantify potential benefits of water supply projects. Together, the geologic framework, watershed, historical, and operational models form a tool that can be used to simulate irrigated agriculture and associated reservoir operations of the integrated hydrologic system of the Salinas Valley.

California↗
USGS2022

Estimated effects of pumping on groundwater storage and Walker River stream efficiencies in Smith and Mason Valleys, west-central Nevada

The Walker River originates in the Sierra Nevada Mountains and flows nearly 160 miles to its terminus at Walker Lake in west-central Nevada. The river provides a source of irrigation water for tens of thousands of acres of agricultural lands in California and Nevada and is the principal source of inflow to Walker Lake. Extraction of groundwater for agricultural use became prevalent in the late 1950s and early 1960s to supplement irrigation demands not met by surface-water diversions during times of drought. There is growing concern that continued groundwater withdrawals within the Walker River Basin are likely contributing to depleted streamflow of the Walker River and the long-term depletion of groundwater storage in the basin. This report documents changes in groundwater storage-volume and trends in Walker River stream efficiency, a measure of change in flow due to gaining or losing conditions, in the two largest agricultural valleys in the Walker River Basin, Smith and Mason Valleys, for a multi-decade period. Groundwater-level maps from previous studies were used for the beginning (1970) and middle (2006) points of this study. Groundwater levels measured from 1991–95 and 2016–20 were used to construct median groundwater-level maps that represented conditions in 1995 and 2020. Valley wide groundwater-level change was calculated by comparing groundwater-level maps for the periods 1970–95, 1996–2006, and 2007–20 and by observing the overall change from 1970 to 2020. Groundwater storage-volume change was calculated using groundwater-level change and previously defined specific yield values. Between 1970 and 2020, groundwater storage-volume declined 287,600 acre-feet in Smith Valley and 269,000 acre-feet in Mason Valley. Using groundwater storage-volume decline and annual groundwater pumpage rates, a maximum groundwater pumpage rate can be computed to support management of water resources. In Smith Valley, groundwater pumping in excess of 22,300 acre-feet per year would likely result in groundwater storage decline. In Mason Valley, groundwater pumping in excess of 75,200 acre-feet per year would likely result in groundwater storage decline. Stream efficiency was calculated using continuous streamflow data and monthly diversion volumes on two reaches: (1) the West Walker River in Smith Valley, from 1948 to 2020 and (2) the Walker River in Mason Valley, from 1958 to 2020. Stream efficiency during non-irrigation season in Smith and Mason Valleys declined at a statistically significant rate of 1.1 and 0.6 percent per year, respectively. Trends in stream efficiency corresponded to occurrence of prolonged drought, deviation from average annual streamflows, and total groundwater pumpage. Long-term declines in groundwater storage-volume and stream efficiency demonstrate that the alluvial aquifer system is becoming increasingly depleted, such that the river can no longer replenish groundwater storage while simultaneously balancing groundwater and surface-water withdrawals. The introduction of supplemental groundwater pumpage was intended to offset surface-water deficits during dry years; however, pumpage occurs even in years when average or above average streamflows meet surface-water demands. Reliance on supplemental groundwater pumpage has resulted in widespread groundwater storage-volume decline and decreased stream efficiency. With each successive drought cycle, the ability of Walker River to sustain streamflows and convey water downstream has diminished. Above average wet periods have a marginal and short-lived effect on rebounding the groundwater levels outside of the river corridor. Moreover, if the trend continues, each future drought cycle may further reduce groundwater supplies and that may further decrease streamflow reliability.

Nevada↗
USGS2009

Identifying sources of dissolved organic carbon in agriculturally dominated rivers using radiocarbon age dating: Sacramento-San Joaquin River Basin, California

We used radiocarbon measurements of dissolved organic carbon (DOC) to resolve sources of riverine carbon within agriculturally dominated landscapes in California. During 2003 and 2004, average Δ 14 C for DOC was −254‰ in agricultural drains in the Sacramento–San Joaquin Delta, −218‰ in the San Joaquin River, −175‰ in the California State Water Project and −152‰ in the Sacramento River. The age of bulk DOC transiting the rivers of California’s Central Valley is the oldest reported for large rivers and suggests wide-spread loss of soil organic matter caused by agriculture and urbanization. Using DAX 8 adsorbent, we isolated and measured 14 C concentrations in hydrophobic acid fractions (HPOA); river samples showed evidence of bomb-pulse carbon with average Δ 14 C of 91 and 76‰ for the San Joaquin and Sacramento Rivers, respectively, with older HPOA, −204‰, observed in agricultural drains. An operationally defined non-HPOA fraction of DOC was observed in the San Joaquin River with seasonally computed Δ 14 C values of between −275 and −687‰; the source of this aged material was hypothesized to be physically protected organic-matter in high clay-content soils and agrochemicals (i.e., radiocarbon-dead material) applied to farmlands. Mixing models suggest that the Sacramento River contributes about 50% of the DOC load in the California State Water Project, and agricultural drains contribute approximately one-third of the load. In contrast to studies showing stabilization of soil carbon pools within one or two decades following land conversion, sustained loss of soil organic matter, occurring many decades after the initial agricultural-land conversion, was observed in California’s Central Valley.

California↗
USGS2016

Agricultural damages and losses from ARkStorm scenario flooding in California

Scientists designed the ARkStorm scenario to challenge the preparedness of California communities for widespread flooding with a historical precedence and increased likelihood under climate change. California is an important provider of vegetables, fruits, nuts, and other agricultural products to the nation. This study analyzes the agricultural damages and losses pertaining to annual crops, perennial crops, and livestock in California exposed to ARkStorm flooding. Statewide, flood damage is incurred on approximately 23% of annual crop acreage, 5% of perennial crop acreage, and 5% of livestock, e.g., dairy, feedlot, and poultry, acreage. The sum of field repair costs, forgone income, and product replacement costs span \$3.7 and \$7.1 billion (2009) for a range of inundation durations. Perennial crop loss estimates dominate, and the vulnerability of orchards and vineyards has likely increased with recent expansion. Crop reestablishment delays from levee repair and dewatering more than double annual crop losses in the delta islands, assuming the fragile system does not remain permanently flooded. The exposure of almost 200,000 dairy cows to ARkStorm flooding poses livestock evacuation challenges.

California↗
USGS2014

Hydrologic models and analysis of water availability in Cuyama Valley, California

Changes in population, agricultural development practices (including shifts to more water-intensive crops), and climate variability are placing increasingly larger demands on available water resources, particularly groundwater, in the Cuyama Valley, one of the most productive agricultural regions in Santa Barbara County. The goal of this study was to produce a model capable of being accurate at scales relevant to water management decisions that could be considered in the evaluation of the sustainable water supply. The Cuyama Valley Hydrologic Model (CUVHM) was designed to simulate the most important natural and human components of the hydrologic system, including components dependent on variations in climate, thereby providing a reliable assessment of groundwater conditions and processes that can inform water users and help to improve planning for future conditions. Model development included a revision of the conceptual model of the flow system, construction of a precipitation-runoff model using the Basin Characterization Model (BCM), and construction of an integrated hydrologic flow model with MODFLOW-One-Water Hydrologic Flow Model (MF-OWHM). The hydrologic models were calibrated to historical conditions of water and land use and, then, used to assess the use and movement of water throughout the Valley. These tools provide a means to understand the evolution of water use in the Valley, its availability, and the limits of sustainability. The conceptual model identified inflows and outflows that include the movement and use of water in both natural and anthropogenic systems. The groundwater flow system is characterized by a layered geologic sedimentary sequence that—in combination with the effects of groundwater pumping, natural recharge, and the application of irrigation water at the land surface—displays vertical hydraulic-head gradients. Overall, most of the agricultural demand for water in the Cuyama Valley in the initial part of the growing season is supplied by groundwater, which is augmented by precipitation during wet winter and spring seasons. In addition, the amount of groundwater used for irrigation varies from year to year in response to climate variation and can increase dramatically in dry years. Model simulation results, however, also indicated that irrigation may have been less efficient during wet years. Agricultural pumpage is a major component to simulated outflow that is often poorly recorded. Therefore, an integrated, coupled farm-process model is used to estimate historical pumpage for water-balance subregions that evolved with the development of groundwater in the Valley from 1949 through 2010. The integrated hydrologic model includes these water-balance subregions and delineates natural, municipal, and agricultural land use; streamflow networks; and groundwater flow systems. The redefinition of the geohydrologic framework (including the internal architecture of the sedimentary units) and incorporation of these units into the simulation of the regional groundwater flow system indicated that faults have compartmentalized the alluvial deposits into subregions, which have responded differently to regional groundwater flow, locations of recharge, and the effects of development. The Cuyama Valley comprises nine subregions grouped into three regional zones, the Main, Ventucopa Uplands, and Sierra Madre Foothills, which are fault bounded, represent different proportions of the three alluvial aquifers, and have different water quality. The CUVHM uses MF-OWHM to simulate and assess the use and movement of water, including the evolution of land use and related water-balance regions. The model is capable of being accurate at annual to interannual time frames and at subregional to valley-wide spatial scales, which allows for analysis of the groundwater hydrologic budget for the water years 1950–2010, as well as potential assessment of the sustainable use of groundwater. Simulated changes in storage over time showed that significant withdrawals from storage generally occurred not only during drought years (1976–77 and 1988–92) but also during the early stages of industrial agriculture, which was initially dominated by alfalfa production. Since the 1990s, agriculture has shifted to more water-intensive crops. Measured and simulated groundwater levels indicated substantial declines in selected subregions, mining of groundwater that is thousands to tens of thousands of years old, increased groundwater storage depletion, and land subsidence. Most of the recharge occurs in the upland regions of Ventucopa and Sierra Madre Foothills, and the largest fractions of pumpage and storage depletion occur in the Main subregion. The long-term imbalance between inflows and outflows resulted in simulated overdraft (groundwater withdrawals in excess of natural recharge) of the groundwater basin over the 61-year period of 1949–2010. Changes in storage varied considerably from year to year, depending on land use, pumpage, and climate conditions. Climatically driven factors can greatly affect inflows, outflows, and water use by more than a factor of two between wet and dry years. Although precipitation during inter-decadal wet years previously replenished the basin, the water use and storage depletion have lessened the effects of these major recharge events. Simulated and measured water-level altitudes indicated the presence of large areas where depressed water levels have resulted in large desaturated zones in the younger and Older Alluvium layers in the Main-zone subregions. The results of modeled projection of the base-case scenario 61 years into the future indicated that current supply-and-demand are unsustainable and will result in additional groundwater-level declines and related storage depletion and land subsidence. The reduced-supply and reduced-demand projections reduced groundwater storage depletion but may not allow for sustainable agriculture under current demands, agricultural practices, and land use.

California↗
USGS1992

Simulation of water-table response to management alternatives, central part of the western San Joaquin Valley, California

The occurrence of selenium in agricultural drainwater in the central pan of the western San Joaquin Valley, California, has focused concern on alternatives other than agricultural drains for managing shallow, poor-quality ground water. A transient, three-dimensional, finite-difference ground-water flow model was developed to assess the response of the water table to various management alternatives. The modeled area is 551 square miles and includes the semiconfined and confined zones above and below the Corcoran Clay Member of the Tulare Formation of Pleistocene age. The model was calibrated using hydrologic data from 1972 to 1988 and was able to reproduce the average change in water-table altitude to within 4 percent. The calibrated model was extended to forecast to the year 2040 for various management alternatives including maintenance of present practices, land retirement, reduced recharge, increased ground-water pumping, combinations of these alternatives, and five alternatives proposed by the U.S. Bureau of Reclamation. The model indicates that if current rates of recharge and pumping (as determined from an analysis of 1980 water-budget data) are maintained, the total area subject to bare-soil evaporation will increase by more than 50 percent and drainflow will increase by 20 percent. Model results indicate that retirement of land will result in a water-table decline beneath the area retired, but the effect on adjacent areas will be small to negligible. The effects of reducing recharge or increasing ground-water pumping vary with the magnitude of the change relative to average conditions and the size of the area managed. The area of land subject to bare-soil evaporation and the amount of drainflow in the model area can be reduced by more than 40 and 50 percent, respectively, if (1) recharge is reduced by 40 percent (about 0.3 foot per year) in areas that currently use only surface water, and by 15 percent (an average of about O. 1 foot per year) in the remainder of the model area; (2) pumping is increased by 0.5 foot per year in areas that currently use surface and ground water.

Water-Resources Investigations Report↗
USGS2005

Calibration of a texture-based model of a ground-water flow system, western San Joaquin Valley, California

The occurrence of selenium in agricultural drain water from the western San Joaquin Valley, California, has focused concern on the semiconfined ground-water flow system, which is underlain by the Corcoran Clay Member of the Tulare Formation. A two-step procedure is used to calibrate a preliminary model of the system for the purpose of determining the steady-state hydraulic properties. Horizontal and vertical hydraulic conductivities are modeled as functions of the percentage of coarse sediment, hydraulic conductivities of coarse-textured (K coarse ) and fine-textured (K fine ) end members, and averaging methods used to calculate equivalent hydraulic conductivities. The vertical conductivity of the Corcoran (K corc ) is an additional parameter to be evaluated. In the first step of the calibration procedure, the model is run by systematically varying the following variables: (1) K coarse /K fine , (2) K coarse /K corc , and (3) choice of averaging methods in the horizontal and vertical directions. Root mean square error and bias values calculated from the model results are functions of these variables. These measures of error provide a means for evaluating model sensitivity and for selecting values of K coarse , K fine , and K corc for use in the second step of the calibration procedure. In the second step, recharge rates are evaluated as functions of K coarse , K corc , and a combination of averaging methods. The associated K fine values are selected so that the root mean square error is minimized on the basis of the results from the first step. The results of the two-step procedure indicate that the spatial distribution of hydraulic conductivity that best produces the measured hydraulic head distribution is created through the use of arithmetic averaging in the horizontal direction and either geometric or harmonic averaging in the vertical direction. The equivalent hydraulic conductivities resulting from either combination of averaging methods compare favorably to field- and laboratory-based values.

California↗
USGS1990

Calibration of a texture-based model of a ground-water flow system, western San Joaquin Valley, California

The occurrence of selenium in agricultural drain water from the western San Joaquin Valley, California, has focused concern on the semiconfined ground-water flow system, which is underlain by the Corcoran Clay Member of the Tulare Formation. A two-step procedure is used to calibrate a preliminary model of the system for the purpose of determining the steady-state hydraulic properties. Horizontal and vertical hydraulic conductivities are modeled as functions of the percentage of coarse sediment, hydraulic conductivities of coarse-textured (Keearse) and fine-textured (Kfine) end members, and averaging methods used to calculate equivalent hydraulic conductivities. The vertical conductivity of the Corcoran (Keen) is an additional parameter to be evaluated. In the first step of the calibration procedure, the model is run by systematically varying the following variables: (1) Kcoarse/Kfine' (2) KcoarsdKcorc' and (3) choice of averaging methods in the horizontal and vertical directions. Root mean square error and bias values calculated from the model results are functions of these variables. These measures of error provide a means for evaluating model sensitivity and for selecting values of Keearse, Kfine, and Kcorc for use in the second step of the calibration procedure. In the second step, recharge rates are evaluated as functions of Keearse, Kcere, and a combination of averaging methods. The associated Kfine values are selected so that the root mean square error is minimized on the basis of the results from the first step. The results of the two-step procedure indicate that the spatial distribution of hydraulic conductivity that best produces the measured hydraulic head distribution is created through the use of arithmetic averaging in the horizontal direction and either geometric or harmonic averaging in the vertical. The equivalent hydraulic conductivities resulting from either combination of averaging methods compare favorably to field- and laboratory-based values.

California↗
USGS1992

Toxicity of agricultural subsurface drainwater from the San Joaquin Valley, California to juvenile chinook salmon and striped bass

Juvenile chinook salmon Oncorhynchus tshawytscha (40-50 mm total length, TL) and striped bass Morone saxatilis (30-40 mm TL) were exposed to serial dilutions (100, 50, 25, and 12.5%) of agricultural subsurface drainwater (WWD), reconstituted drainwater (RWWD), and reconstituted seawater (IO). Agricultural subsurface drainwater contained naturally elevated concentrations of major ions (such as sodium and sulfate) and trace elements (especially boron and selenium), RWWD contained concentrations of major ions that mimicked those in WWD but trace elements were not elevated, and IO contained concentrations of total dissolved salt that were similar to those in WWD and RWWD but chloride replaced sulfate as the dominant anion. After 28 d of static exposure, over 75% of the chinook salmon in 100% WWD had died, whereas none had died in other dilutions and water types. Growth of chinook salmon in WWD and RWWD, but not in IO, exhibited dilution responses. All striped bass died in 100% WWD within 23 d, whereas 19 of 20 striped bass had died in 100% RWWD after 28 d. In contrast, none died in 100% IO. Growth of striped bass was impaired only in WWD. Fish in WWD accumulated as much as 200 μg/g (dry-weight basis) of boron, whereas fish in control water accumulated less than 3.1 μg/g. Although potentially toxic concentrations of selenium occurred in WWD (geometric means, 158-218 μg/L), chinook salmon and striped bass exposed to this water type accumulated 5.7 μg Se/g or less. These findings indicate that WWD was toxic to chinook salmon and striped bass. Judging from available data, the toxicity of WWD was due primarily to high concentrations of major ions present in atypical ratios, to high concentrations of sulfate, or to both. High concentrations of boron and selenium also may have contributed to the toxicity of WWD, but their effects were not clearly delineated.

California↗
USGS2019

Identification of single nucleotide polymorphisms for use in a genetic stock identification system for greater white-fronted goose (Anser albifrons) subspecies wintering in California

California provides wintering habitat for most greater white-fronted geese ( Anser albifrons [GWFG]) in the Pacific Flyway and this population has rapidly increased since the 1980s. Increased harvest of GWFG wintering in California may prevent agricultural depredation while providing increased hunting opportunities. However, changes in harvest levels are unlikely to be uniform across the species because of the presence of multiple subspecies of GWFG in the Pacific Flyway, each with their own population distribution and trends. White-fronted geese in the Cook Inlet Basin of south-central Alaska, a potentially vulnerable subspecies (Tule goose, A. a. elgasi ), are among the geese that winter predominantly in the Sacramento Valley and Suisun and Napa marshes of north-central California. Efforts to limit sport harvest of Tule geese are complicated because although the subspecies is phenotypically larger and darker in color than other subspecies, they can be difficult to identify in the field and in hunter bag checks. To assist in an accurate assessment of Tule goose harvest, we used double-digest restriction site-associated deoxyribonucleic acid sequencing (ddRAD-seq) techniques to develop a genetic stock identification panel of single nucleotide polymorphisms (SNPs) to differentiate Tule geese from individuals belonging to other GWFG subspecies and populations that winter in California. Although the panel we developed was designed and tested for Fluidigm SNP-type technology, the ddRAD-seq sequences can be used to design SNP panels for use in other platforms.

Alaska, California↗
USGS1998

Pesticides in storm runoff from agricultural and urban areas in the Tuolumne River basin in the vicinity of Modesto, California

The occurrence, concentrations, and loads of dissolved pesticides in storm runoff were compared for two contrasting land uses in the Tuolumne River Basin, California, during two different winter storms: agricultural areas (February 1994) and the Modesto urban area (February 1995). Both storms followed the main application period of pesticides on dormant almond orchards. Eight samples of runoff from agricultural areas were collected from a Tuolumne River site, and 10 samples of runoff from urban areas were collected from five storm drains. All samples were analyzed for 46 pesticides. Six pesticides were detected in runoff from agricultural areas, and 15 pesticides were detected in runoff from urban areas. Chlorpyrifos, diazinon, dacthal (DCPA), metolachlor, and simazine were detected in almost every sample. Median concentrations were higher in the runoff from urban areas for all pesticides except napropamide and simazine. The greater occurrence and concentrations in storm drains is partly attributed to dilution of agricultural runoff by nonstorm base-flow in the Tuolumne River and by storm runoff from nonagricultural and nonurban land. In most cases, the occurrence and relative concentrations of pesticides found in storm runoff from agricultural and urban areas were related to reported pesticide application. Pesticide concentrations in runoff from agricultural areas were more variable during the storm hydrograph than were concentrations in runoff from urban areas. All peak pesticide concentrations in runoff from agricultural areas occurred during the rising limb of the storm hydrograph, whereas peak concentrations in the storm drains occurred at varying times during the storm hydrograph. Transport of pesticides from agricultural areas during the February 1994 storm exceeded transport from urban areas during the February 1995 storm for chlorpyrifos, diazinon, metolachlor, napropamide, and simazine. Transport of DCPA was about the same from agricultural and urban sources, and the main source of transport for the other pesticides could not be determined because of concentrations less than the method detection limit.

Water-Resources Investigations Report↗
USGS2008

Nitrogen fluxes through unsaturated zones in five agricultural settings across the United States

The main physical and chemical controls on nitrogen (N) fluxes between the root zone and the water table were determined for agricultural sites in California, Indiana, Maryland, Nebraska, and Washington from 2004 to 2005. Sites included irrigated and nonirrigated fields; soil textures ranging from clay to sand; crops including corn, soybeans, almonds, and pasture; and unsaturated zone thicknesses ranging from 1 to 22 m. Chemical analyses of water from lysimeters and shallow wells indicate that advective transport of nitrate is the dominant process affecting the flux of N below the root zone. Vertical profiles of (i) nitrogen species, (ii) stable isotopes of nitrogen and oxygen, and (iii) oxygen, N, and argon in unsaturated zone air and correlations between N and other agricultural chemicals indicate that reactions do not greatly affect N concentrations between the root zone and the capillary fringe. As a result, physical factors, such as N application rate, water inputs, and evapotranspiration, control the differences in concentrations among the sites. Concentrations of N in shallow lysimeters exhibit seasonal variation, whereas concentrations in lysimeters deeper than a few meters are relatively stable. Based on concentration and recharge estimates, fluxes of N through the deep unsaturated zone range from 7 to 99 kg ha −1 yr −1 Vertical fluxes of N in ground water are lower due to spatial and historical changes in N inputs. High N fluxes are associated with coarse sediments and high N application rates.

Journal of Environmental Quality↗
USGS1988

Character and evolution of the ground-water flow system in the central part of the western San Joaquin Valley, California

The occurrence of selenium in agricultural drain water derived from the western San Joaquin Valley, California, has focused concern on the ground-water flow system of the western valley. In this investigation, previous work and recently collected texture and water-level data are used to evaluate the character and evolution of the regional ground-water flow system in the central part of the western valley, with particular emphasis on the deposits overlying the Corcoran Clay Member of the Tulare Formation. The Corcoran Clay Member, where present, divides the flow system into an upper semiconfined zone and a lower con-fined zone. Above the Corcoran, three hydrogeologic units can be recognized: Coast Range alluvium, Sierran sand, and flood-basin deposits. These units differ in texture, hydrologic properties, and oxidation state. The development of irrigated agriculture in the central part of the western valley has significantly altered the flow system. Percolation of irrigation water past crop roots has caused a rise in the altitude of the water table in midfan and distal-fan areas. Pumpage of ground water from wells has caused a lowering of the water table beneath parts of the fanheads and a lowering of the potentiometric surface of the confined zone over much of the western valley. The combination of percolation and pumpage has resulted in development of a large downward hydraulic head gradient in the semi-confined zone and has created a groundwater divide along the western margin of the valley. Surface-water deliveries from the California Aqueduct have allowed a decrease in pumpage and a consequent recovery in hydraulic head throughout the system.

California↗
USGS2014

Annual migratory patterns of long-billed curlews in the American west

Effective conservation of migratory species requires comprehensive knowledge of annual movement patterns. Such information is sparse for the Long-billed Curlew ( Numenius americanus ), a North American endemic shorebird of conservation concern. To test hypotheses about individual and area differences in migratory patterns across western North America, we tagged 29 curlews with satellite transmitters at breeding sites in Oregon, Nevada, and Montana. Transmissions from 28 birds for up to 4 years demonstrated that all wintered within the species’ known winter range, including 9 from Oregon tracked to agricultural areas of California’s Central Valley; 5 from Nevada tracked to the Central Valley, northern Gulf of California, or west coast of Baja California, Mexico; and 14 from Montana that wintered inland, from the Texas Panhandle south to the Mexican Plateau, or near the Gulf of Mexico. Montana breeders migrated east of the Rocky Mountains and traveled more than twice the distance of Oregon and Nevada breeders. Montana birds also stopped more often and longer during most passages. As a group, curlews arrived on their Oregon breeding grounds earlier than in Montana, while males preceded females in Montana and possibly Oregon. No consistent pattern emerged between sexes in departure from breeding areas, although within pairs males departed later than their mates. Individuals exhibited strong fidelity to breeding and wintering sites, and many birds showed a strong propensity for agricultural regions during winter. Our results underscore the importance of studying

Montana;Nevada;Oregon↗
USGS2002

Evapotranspiration from selected fallowed agricultural fields on the Tule Lake National Wildlife Refuge, California, during May to October 2000

An investigation of evapotranspiration, vegetation quantity and composition, and depth to the water table below the land surface was made at three sites in two fallowed agricultural lots on the 15,800-hectare Tule Lake National Wildlife Refuge in northern California during the 2000 growing season. All three sites had been farmed during 1999, but were not irrigated since the 1999 growing season. Vegetation at the lot C1B and lot 6 stubble sites included weedy species and small grain plants. The lot 6 cover crop site supported a crop of cereal rye that had been planted during the previous winter. Percentage of coverage by live vegetation ranged from 0 to 43.2 percent at the lot C1B site, from approximately 0 to 63.2 percent at the lot 6 stubble site, and it was estimated to range from 0 to greater than 90 percent at the lot 6 cover crop site. Evapotranspiration was measured using the Bowen ratio energy balance technique and it was estimated using a model that was based on the Priestley-Taylor equation and a model that was based on reference evapotranspiration with grass as the reference crop. Total evapotranspiration during May to October varied little among the three evapotranspiration measurement sites, although the timing of evapotranspiration losses did vary among the sites. Total evapotranspiration from the lot C1B site was 426 millimeters, total evapotranspiration from the lot 6 stubble site was 444 millimeters, and total evapotranspiration from the lot 6 cover crop site was 435 millimeters. The months of May to July accounted for approximately 78 percent of the total evapotranspiration from the lot C1B site, approximately 63 percent of the evapotranspiration from the lot 6 stubble site, and approximately 86 percent of the total evapotranspiration from the lot 6 cover crop site. Estimated growing season precipitation accounted for 16 percent of the growing-season evapotranspiration at the lot C1B site and for 17 percent of the growing-season evapotranspiration at the lot 6 stubble and cover crop sites. The ratio of evapotranspiration rate to the reference evapotranspiration rate was strongly correlated with percentage of site coverage by vegetation at the lot C1B and lot 6 stubble sites (correlation coefficient = 0.95, sample size = 6), where percentage of site coverage was determined from quantitative vegetation surveys. It is concluded that evapotranspiration was mediated by the vegetation at all three sites, and that the differences in seasonal timing of evapotranspiration losses were caused by differences in timing of vegetation growth and development and senescence among the sites. Depth to the water table below the land surface at lot C1B ranged from 0.67 meters in early July to greater than 1.39 meters in late August. Depth to the water table at lot 6 ranged from 0.77 meter in late May to greater than 1.40 meters in late August.

Water-Resources Investigations Report↗
USGS2013

Modeling the long-term fate of agricultural nitrate in groundwater in the San Joaquin Valley, California

Nitrate contamination of groundwater systems used for human water supplies is a major environmental problem in many parts of the world. Fertilizers containing a variety of reduced nitrogen compounds are commonly added to soils to increase agricultural yields. But the amount of nitrogen added during fertilization typically exceeds the amount of nitrogen taken up by crops. Oxidation of reduced nitrogen compounds present in residual fertilizers can produce substantial amounts of nitrate which can be transported to the underlying water table. Because nitrate concentrations exceeding 10 mg/L in drinking water can have a variety of deleterious effects for humans, agriculturally derived nitrate contamination of groundwater can be a serious public health issue. The Central Valley aquifer of California accounts for 13 percent of all the groundwater withdrawals in the United States. The Central Valley, which includes the San Joaquin Valley, is one of the most productive agricultural areas in the world and much of this groundwater is used for crop irrigation. However, rapid urbanization has led to increasing groundwater withdrawals for municipal public water supplies. That, in turn, has led to concern about how contaminants associated with agricultural practices will affect the chemical quality of groundwater in the San Joaquin Valley. Crop fertilization with various forms of nitrogen-containing compounds can greatly increase agricultural yields. However, leaching of nitrate from soils due to irrigation has led to substantial nitrate contamination of shallow groundwater. That shallow nitrate-contaminated groundwater has been moving deeper into the Central Valley aquifer since the 1960s. Denitrification can be an important process limiting the mobility of nitrate in groundwater systems. However, substantial denitrification requires adequate sources of electron donors in order to drive the process. In many cases, dissolved organic carbon (DOC) and particulate organic carbon (POC) are the primary electron donors driving active denitrification in groundwater. The purpose of this chapter is to use a numerical mass balance modeling approach to quantitatively compare sources of electron donors (DOC, POC) and electron acceptors (dissolved oxygen, nitrate, and ferric iron) in order to assess the potential for denitrification to attenuate nitrate migration in the Central Valley aquifer.

California↗