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Geomorphic, flood, and groundwater-flow characteristics of Bayfield Peninsula streams, Wisconsin, and implications for brook-trout habitat

In 2002–03, the U.S. Geological Survey conducted a study of the geomorphic, flood, and groundwater-flow characteristics of five Bayfield Peninsula streams, Wisconsin (Cranberry River, Bark River, Raspberry River, Sioux River, and Whittlesey Creek) to determine the physical limitations for brook-trout habitat. The goals of the study were threefold: (1) to describe geomorphic characteristics and processes, (2) to determine how land-cover characteristics affect flood peaks, and (3) to determine how regional groundwater flow patterns affect base flow. The geomorphic characterization consisted of analyses of historical aerial photographs and General Land Office Survey notes, observations from helicopter video footage, surveys of valley cross sections, and coring. Sources of sediment were identified from the helicopter video and field surveys, and past erosion-control techniques were evaluated. Geomorphic processes, such as runoff sediment erosion, transport, and deposition, are driven by channel location within the drainage network, texture of glacial deposits, and proximity to postglacial lake shorelines; these processes have historically increased because of decreases in upland forest cover and channel roughness. Sources of sediment for all studied streams mainly came from bank, terrace, or bluff erosion along main stem reaches and along feeder tributaries that bisect main-stem entrenched valley sides. Bluff, terrace, and bank erosion were the major sources of sediment to Whittlesey Creek and the Sioux River. No active bluff erosion was observed on the Cranberry River or the Bark River but anecdotal information suggests that landslides occasionally happen on the Cranberry River. For the Bark River, sources of sediment were somewhat evenly divided among road crossings (bridges, culverts, and unimproved forest lanes), terrace erosion, bank erosion, and incision along upper main stems and feeder channels along valley sides. Evaluation of past erosion-control techniques indicated that bluffs were stabilized by a combination of artificial hardening and bioengineering of the bluff base and reducing mass wasting of the tops of the bluffs. Flood hydrographs for the Cranberry River were simulated for four land-cover scenarios—late 20th century (1992–93), presettlement (before 1870), peak agriculture (1928), and developed (25 percent urban). Results were compared to previous simulations of flood peaks for Whittlesey Creek and for North Fish Creek (southern adjacent basin to Whittlesey Creek). Even though most uplands are presently forested, flood peaks simulated for 1992–93 were 1.5 to 2 times larger than presettlement flood peaks. The increased flood peaks caused (1) increased incision along upper main stems and tributaries that bisect entrenched valley sides, (2) bluff and terrace erosion along reaches with entrenched valleys, (3) overbank deposition and bar formation in middle and lower main stems, and (4) aggradation in mouth areas. A base-flow survey was conducted and a groundwater-flow model was developed for the Bayfield Peninsula to delineate groundwater contributing areas. A deep aquifer system, which includes thick deposits of sand and the upper part of the bedrock, is recharged through the permeable sands in the center of the peninsula. Base flow is unevenly distributed among the Bayfield streams and depends on the amount of channel incision and the proximity of the channels to the recharge area and coarse outwash deposits. Groundwater contributing areas for the five streams do not coincide with surface-water-contributing areas. About 89 percent of total recharge to the deep aquifer system discharges to Bayfield streams; the remaining 11 percent directly discharges to Lake Superior. Historical land-cover changes have had negligible effects on groundwater-flow from the deep aquifer system. Available brook-trout habitat is dependent on the locations of groundwater upwellings, the sizes of flood peaks, and sediment loads. Management practices that focus on reducing or slowing runoff from upland areas and increasing channel roughness have potential to reduce flood peaks, erosion, and sedimentation and improve brook-trout habitat in all Bayfield Peninsula streams.

Wisconsin

Modeling chronic wasting disease transmission risk in mule deer related to habitat characteristics

Chronic wasting disease (CWD) is a prion disease of cervids that spreads to uninfected individuals through direct transmission (contact with infected individuals), vertical transmission (from mother to offspring), or indirect transmission (exposure to contaminated environments). The risk of indirect transmission is unevenly distributed on the landscape, and risk levels are expected to be controlled by patterns of habitat use by infected and uninfected individuals as well as environmental properties that alter the length of time prions remain infectious and available for uptake. Despite evidence from controlled or laboratory studies identifying environmental properties likely to affect patterns of CWD prion locations on the landscape, it remains difficult to connect mechanisms to realized increased or decreased risk of disease transmission, and few studies have attempted to detect patterns of different CWD risk in different environments. Using data from GPS-collared mule deer in Wyoming that were CWD-tested annually, we constructed models predicting annual probability of disease transmission contingent on environmental properties extracted from GPS use points. We compared models that emphasized different pathways of disease transmission by including or excluding sets of covariates that described deer density, habitat selection, and covariates expected to affect prion persistence in the environment. Results indicated that key habitat characteristics often selected by mule deer, such as proximity to secondary roads, were also associated with higher risk of testing positive for CWD, which supports the hypothesis that disease risk was correlated to patterns of habitat use by deer. We also found increased risk associated with spatial properties that were not selected-for by deer, such as areas where topography collects moisture, suggesting that prion retention mechanisms also play a role in risk. Incorporating these spatially-varying risk factors into our understanding of CWD transmission and outbreak progression can support managers in designing data collection and disease management strategies.

Wyoming

Meeting ecological and societal needs for freshwater

Human society has used freshwater from rivers, lakes, groundwater, and wetlands for many different urban, agricultural, and industrial activities, but in doing so has overlooked its value in supporting ecosystems. Freshwater is vital to human life and societal well-being, and thus its utilization for consumption, irrigation, and transport has long taken precedence over other commodities and services provided by freshwater ecosystems. However, there is growing recognition that functionally intact and biologically complex aquatic ecosystems provide many economically valuable services and long-term benefits to society. The short-term benefits include ecosystem goods and services, such as food supply, flood control, purification of human and industrial wastes, and habitat for plant and animal life—and these are costly, if not impossible, to replace. Long-term benefits include the sustained provision of those goods and services, as well as the adaptive capacity of aquatic ecosystems to respond to future environmental alterations, such as climate change. Thus, maintenance of the processes and properties that support freshwater ecosystem integrity should be included in debates over sustainable water resource allocation. The purpose of this report is to explain how the integrity of freshwater ecosystems depends upon adequate quantity, quality, timing, and temporal variability of water flow. Defining these requirements in a comprehensive but general manner provides a better foundation for their inclusion in current and future debates about allocation of water resources. In this way the needs of freshwater ecosystems can be legitimately recognized and addressed. We also recommend ways in which freshwater ecosystems can be protected, maintained, and restored. Freshwater ecosystem structure and function are tightly linked to the watershed or catchment of which they are a part. Because riverine networks, lakes, wetlands, and their connecting groundwaters, are literally the “sinks” into which landscapes drain, they are greatly influenced by terrestrial processes, including many human uses or modifications of land and water. Freshwater ecosystems, whether lakes, wetlands, or rivers, have specific requirements in terms of quantity, quality, and seasonality of their water supplies. Sustainability normally requires these systems to fluctuate within a natural range of variation. Flow regime, sediment and organic matter inputs, thermal and light characteristics, chemical and nutrient characteristics, and biotic assemblages are fundamental defining attributes of freshwater ecosystems. These attributes impart relatively unique characteristics of productivity and biodiversity to each ecosystem. The natural range of variation in each of these attributes is critical to maintaining the integrity and dynamic potential of aquatic ecosystems; therefore, management should allow for dynamic change. Piecemeal approaches cannot solve the problems confronting freshwater ecosystems. Scientific definitions of the requirements to protect and maintain aquatic ecosystems are necessary but insufficient for establishing the appropriate distribution between societal and ecosystem water needs. For scientific knowledge to be implemented science must be connected to a political agenda for sustainable development. We offer these recommendations as a beginning to redress how water is viewed and managed in the United States: (1) Frame national and regional water management policies to explicitly incorporate freshwater ecosystem needs, particularly those related to naturally variable flow regimes and to the linking of water quality with water quantity; (2) Define water resources to include watersheds, so that freshwaters are viewed within a landscape, or systems context; (3) Increase communication and education across disciplines, especially among engineers, hydrologists, economists, and ecologists to facilitate an integrated view of freshwater resources; (4) Increase restoration efforts, using well-grounded ecological principles as guidelines; (5) Maintain and protect the remaining freshwater ecosystems that have high integrity; and (6) Recognize the dependence of human society on naturally functioning ecosystems.

Ecological Applications

Comparative mobility of sulfonamides and bromide tracer in three soils

In animal agriculture, sulfonamides are one of the routinely used groups of antimicrobials for therapeutic and sub-therapeutic purposes. It is observed that, the animals when administered the antimicrobials, often do not completely metabolize them; and excrete the partially metabolized forms into the environment. Due to the continued use of antimicrobials and disposal of untreated waste, widespread occurrence of partially metabolized antimicrobials in aquatic and terrestrial environments has been reported in various scientific journals. In this research, the mobility of two sulfonamides - sulfamethazine (SMN), sulfathiazole (STZ) and a conservative bromide tracer was investigated in three soils collected from regions in the United States with large number of concentrated animal-feed operations. Results of a series of column studies indicate that the mobility of these two sulfonamides was dependent on pH, soil charge density, and contact time. At low pH and high charge density, substantial retention of sulfonamides was observed in all three soils investigated, due to the increased fraction of cationic and neutral forms of the sulfonamides. Conversely, enhanced mobility was observed at high pH, where the sulfonamides are predominantly in the anionic form. The results indicate that when both SMN and STZ are predominantly in anionic forms, their mobility approximates the mobility of a conservative bromide tracer. This observation is consistent for the mobility of both SMN and STZ individually, and also in the presence of several other antimicrobials in all three soils investigated. Higher contact time indicates lower mobility due to increased interaction with soil material.

Journal of Environmental Management

Characterization of Ground-Water Quality, Upper Republican Natural Resources District, Nebraska, 1998-2001

Nearly all rural inhabitants and livestock in the Upper Republican Natural Resources District (URNRD) in southwestern Nebraska use ground water that can be affected by elevated nitrate concentrations. The development of ground-water irrigation in this area has increased the vulnerability of ground water to the introduction of fertilizers and other agricultural chemicals. In 1998, the U.S. Geological Survey, in cooperation with the Upper Republican Natural Resources District, began a study to characterize the quality of ground water in the Upper Republican Natural Resources District area with respect to physical properties and concentrations of major ions, coliform bacteria, nitrate, and pesticides, and to assess the presence of nitrogen concentrations in the unsaturated zone. At selected well sites, the ground-water characterization also included tritium and nitrogen-isotope analyses to provide information about the approximate age of the ground water and potential sources of nitrogen detected in ground-water samples, respectively. In 1998, ground-water samples were collected from 101 randomly selected domestic-well sites. Of the 101 samples collected, 26 tested positive for total coliform bacteria, exceeding the U.S. Environmental Protection Agency's Maximum Contaminant Level (MCL) of zero colonies. In 1999, ground-water samples were collected from 31 of the 101 well sites, and 16 tested positive for coliform bacteria. Nitrates were detected in ground water from all domestic-well samples and from all but four of the irrigation-well samples collected from 1998 to 2001. Eight percent of the domestic-well samples and 3 percent of the irrigation-well samples had nitrate concentrations exceeding the U.S. Environmental Protection Agency's MCL for drinking water of 10 milligrams per liter. Areas with nitrate concentrations exceeding 6 milligrams per liter, the URNRD's ground-water management-plan action level, were found predominantly in north-central Chase, western and south-central Dundy, and south-central Perkins Counties. Generally, these concentrations were detected in samples from wells located in upland areas with permeable soils and a high percentage of cropland. In 1999, 31 of the ground-water samples collected from irrigation wells were analyzed for pesticides, and 14 samples (45 percent) had detectable concentrations of at least one pesticide compound. In 2000, all of the 23 irrigation-well samples analyzed had one or more pesticides present at detectable concentrations. In 2001, 12 of 26 domestic-well samples (46 percent) had detectable concentrations. Although the analytical method used during the study was changed to increase the number of pesticides included in the analyses, the pesticides detected in the ground-water samples from domestic and irrigation wells were limited to the commonly used herbicide compounds acetochlor, alachlor, atrazine, metolachlor, prometon, propachlor, propazine, trifluralin, and the atrazine degradation product deethylatrazine. Of the compounds detected, only atrazine (3.0 micrograms per liter) and alachlor (2.0 micrograms per liter) have MCLs established by the U.S. Environmental Protection Agency. None of the ground-water samples from the URNRD study area had concentrations that exceeded either MCL. Tritium age-dating analyses indicate water from about one-third of the sites entered the ground-water system prior to 1952. Because the increase in agricultural practices occurred during the 1950s and 1960s, it can be assumed that this water was not influenced by agricultural practices. Nitrogen-isotope speciation analyses for samples from three irrigation wells indicated that the source of nitrates in the ground water probably is synthetic fertilizer; however, the source at most irrigation wells probably is either naturally occurring or a mixture of water from various anthropogenic sources (such as synthetic fertilizer and animal waste).

Scientific Investigations Report

Public, bottled, and private drinking water: Shared contaminant-mixture exposures and effects challenge

BACKGROUND: Humans are primary drivers of environmental contaminant exposures worldwide, including in drinking-water (DW). In the United States (US), point-of-use DW (POU DW) is supplied via private tapwater (TW, predominantly private wells), public-supply TW, and bottled water (BW). Differences in management, monitoring, and messaging and lack of directly intercomparable exposure data influence the actual and perceived quality and safety of different DW supplies and directly impact consumer decision making. OBJECTIVES: The purpose of this paper is to provide a meta-analysis (quantitative synthesis) of POU DW contaminant mixture exposures and corresponding potential human health effects of private-TW, public-TW, and BW by aggregating exposure results and harmonizing apical health benchmark weighted and bioactivity weighted effects predictions across previous studies by this research group. DISCUSSION: Simultaneous exposures to multiple inorganic and organic contaminants of known or suspected human-health concern are common across all three DW supplies, with substantial variability observed in each and no systematic difference in predicted cumulative risk between supply chains. Differences in contaminant or contaminant class exposures (e.g., trace metals, disinfection byproducts), with important implications for DW quality improvements, were observed and attributed to corresponding differences in regulation and compliance monitoring. CONCLUSION: The results indicate that human-health risks from contaminant exposures are common to and comparable in all three DW supplies, including BW. Importantly, this study’s target analytical coverage, which exceeds that currently feasible for water purveyors or homeowners, nevertheless is a substantial underestimation of the full breadth of contaminant mixtures in the environment and potentially present in DW. Thus, the results emphasize the need for improved understanding of the adverse human-health implications of long-term exposures to low level inorganic /organic contaminant mixtures across all three distribution pipelines and do not support commercial messaging of BW as a systematically safer alternative to public-TW. Regardless of the supply, increased engagement in source-water protection and drinking-water treatment, including consumer point of use treatment, is necessary to reduce risks associated with long-term DW contaminant exposures, especially in vulnerable populations, and to reduce environmental waste and plastics contamination.

Environment International

Global synthesis of groundwater recharge in semiarid and arid regions

Global synthesis of the findings from ∼140 recharge study areas in semiarid and arid regions provides important information on recharge rates, controls, and processes, which are critical for sustainable water development. Water resource evaluation, dryland salinity assessment (Australia), and radioactive waste disposal (US) are among the primary goals of many of these recharge studies. The chloride mass balance (CMB) technique is widely used to estimate recharge. Average recharge rates estimated over large areas (40–374 000 km 2 ) range from 0·2 to 35 mm year −1 , representing 0·1–5% of long-term average annual precipitation. Extreme local variability in recharge, with rates up to ∼720 m year −1 , results from focussed recharge beneath ephemeral streams and lakes and preferential flow mostly in fractured systems. System response to climate variability and land use/land cover (LU/LC) changes is archived in unsaturated zone tracer profiles and in groundwater level fluctuations. Inter-annual climate variability related to El Niño Southern Oscillation (ENSO) results in up to three times higher recharge in regions within the SW US during periods of frequent El Niños (1977–1998) relative to periods dominated by La Niñas (1941–1957). Enhanced recharge related to ENSO is also documented in Argentina. Climate variability at decadal to century scales recorded in chloride profiles in Africa results in recharge rates of 30 mm year −1 during the Sahel drought (1970–1986) to 150 mm year −1 during non-drought periods. Variations in climate at millennial scales in the SW US changed systems from recharge during the Pleistocene glacial period (≥10 000 years ago) to discharge during the Holocene semiarid period. LU/LC changes such as deforestation in Australia increased recharge up to about 2 orders of magnitude. Changes from natural grassland and shrublands to dryland (rain-fed) agriculture altered systems from discharge (evapotranspiration, ET) to recharge in the SW US. The impact of LU change was much greater than climate variability in Niger (Africa), where replacement of savanna by crops increased recharge by about an order of magnitude even during severe droughts. Sensitivity of recharge to LU/LC changes suggests that recharge may be controlled through management of LU. In irrigated areas, recharge varies from 10 to 485 mm year −1 , representing 1–25% of irrigation plus precipitation. However, irrigation pumpage in groundwater-fed irrigated areas greatly exceeds recharge rates, resulting in groundwater mining. Increased recharge related to cultivation has mobilized salts that accumulated in the unsaturated zone over millennia, resulting in widespread groundwater and surface water contamination, particularly in Australia. The synthesis of recharge rates provided in this study contains valuable information for developing sustainable groundwater resource programmes within the context of climate variability and LU/LC change.

Hydrological Processes

Evaluation of a mass-balance approach to determine consumptive water use in northeastern Illinois

A principal component of evaluating and managing water use is consumptive use. This is the portion of water withdrawn for a particular use, such as residential, which is evaporated, transpired, incorporated into products or crops, consumed by humans or livestock, or otherwise removed from the immediate water environment. The amount of consumptive use may be estimated by a water (mass)-balance approach; however, because of the difficulty of obtaining necessary data, its application typically is restricted to the facility scale. The general governing mass-balance equation is: Consumptive use = Water supplied - Return flows . This study explored a mass-balance field-based computation of consumptive use in a residential setting at the scale of a sanitary sewer service area (sewershed). In addition, the feasibility (cost and difficulty) and relative uncertainties (accuracies) associated with applying the approach at this scale were evaluated. The study was conducted during 2011–13 within a 3.5-square mile (mi 2 ) sewershed confined to a predominantly residential area of Elk Grove Village, Illinois. Following background evaluation of the geohydrologic setting, sewershed infrastructure, and possible components of supplied and returned water, the identified primary components were 1. public water deliveries by the Elk Grove Village Department of Public Works, 2. self-served groundwater withdrawals in an included unincorporated neighborhood with public sanitary sewer service, 3. return flows to the sanitary sewer system, and 4. direct return of water discharged from swimming pools to Salt Creek. Water volumes principally were reported for deliveries, measured for sanitary sewer returns by using an acoustic Doppler current-velocity meter, and estimated for domestic withdrawals and swimming pool discharges to storm sewers. All water volumes required some degree of estimation. Observation wells were installed adjacent to sewer pipelines (lines) to determine the depth of the water table relative to that of the sewer lines and to collect water samples for detection of optical brighteners, as they are routinely discharged as clotheswashing waste to sanitary sewers. These data provided qualitative information on gains (inflow and infiltration) and losses (exfiltration) of sewer flow by pipe leakage, which might otherwise not be considered in the sewer flow return measurements. Hydrographs of sewer flow also were evaluated to identify and estimate storm-associated inputs to sewer flow. The volume of sanitary sewer return flow (778 million gallons per year [Mgal/yr]) was determined to substantially exceed the volume of supplied water (566 Mgal/yr), thus, for this study setting, voiding the utility of the applied mass-balance approach for estimating consumptive water use. Mass-balance components, including sanitary sewer flow and supplied-water use, were estimated within reasonable limits of uncertainty. Evidence of a water table that is typically shallower than the area’s sewer lines, yet is sometimes depressed near more deeply buried sewer lines, suggests groundwater infiltration into the sewers contributes to the excess volume of return flow. Technical obstacles and project resources precluded accurate quantification of infiltration volumes and other gains and losses to sanitary sewer flow. As estimated from various simplified methods, a minimum of 26 percent of return flow measured in the sanitary sewer represented groundwater infiltration and stormwater inflow; separately, about 2 percent of return flow was estimated as inflow. On the basis of the alternative winter base-rate method, consumptive use in the sewershed was estimated as 13 percent, which compares favorably with that used by the State of Illinois for Lake Michigan allocation accounting (10 percent) and other States and Canadian Provinces in the Great Lakes region (generally 10-15 percent). The study also provided other findings considered useful to studies of water use and to performance evaluation of sanitary sewer infrastructure. In urban residential settings, the comparatively small volumes of nonpublic sources of water (self-supplied) and direct (nonsanitary) return flow potentially can be ignored in the estimation of consumptive use. An acoustic Doppler current-velocity meter can be used in sanitary sewers to accurately measure discharge and reasonably estimate storm-associated inflows. Hourly to daily patterns of water use can be readily identified and quantified in the return flow record for the sanitary sewers. Relative volumes of infiltration gains (and exfiltration losses) can be substantial, even in sewer systems of communities making significant investments in system upgrades to limit sewer line leakage. Monitoring of optical brighteners in groundwater (and potentially in sanitary sewer flow) can provide a useful means of identifying probable leakage from (and to) sewer lines. Accurate quantification of gains and losses to sanitary sewer flow at the sewershed scale will require additional research effort and technical advances. Under ideal conditions, accurate quantification of consumptive use at the sewershed scale by the described mass-balance approach might be possible. Under most prevailing conditions, quantification likely would be more costly and time consuming than that of the present study, given the freely contributed technical support of the host community and relatively appropriate conditions of the study area. Essentials to quantification of consumptive use are a fully cooperative community, storm and sanitary sewers that are separate, and newer sewer infrastructure and (or) a robust program for limiting infiltration, exfiltration, and inflow.

Illinois

Assessment of chronic low‐dose elemental and radiological exposures of biota at the Kanab North uranium mine site in the Grand Canyon watershed

High‐grade U ore deposits are in various stages of exploitation across the Grand Canyon watershed, yet the effects of U mining on ecological and cultural resources are largely unknown. We characterized the concentrations of Al, As, Bi, Cd, Co, Cu, Fe, Pb, Hg, Mo, Ni, Se, Ag, Tl, Th, U, and Zn, gross alpha and beta activities, and U and Th radioisotopes in soil, vegetation ( Hesperostipa comata , Artemisia tridentata, Tamarix chinensis ), and rodents ( Peromyscus maniculatus , P. boylii ) to waste material at the Kanab North mine, a mine with decades‐long surficial contamination, and compared the concentrations ( P < 0.01) to those at a premining site (Canyon Mine). Rodent tissues were also analyzed for radium‐226 and microscopic lesions. Radioactivities and some elemental concentrations (e.g., Co, Pb, U) were greater in the Kanab North mine biological samples than in Canyon Mine biota, indicating a mining‐related elemental signature. Mean rodent Ra‐226 (111 Bq/kg dry weight [dry wt]) was 3 times greater than expected, indicating radioactive disequilibrium. Multiple soil sample U concentrations exceeded a screening benchmark, growth inhibition thresholds for sensitive plants, and an EC 20 for a soil arthropod. Lesions associated with metals exposure were also observed more frequently in rodents at Kanab North than those at Canyon Mine but could not be definitively attributed to U mining. Our results indicate that Kanab North biota have taken up U mining‐related elements owing to chronic exposure to surficial contamination. However, no literature‐based effects thresholds for small rodents were exceeded, and only a few soil and vegetation thresholds for sensitive species were exceeded; therefore, adverse effects to biota from U mining‐related elements at Kanab North are unlikely despite chronic exposure.

Integrated Environmental Assessment and Management

Depletion of rice as food of waterfowl wintering in the Mississippi Alluvial Valley

Waterfowl habitat conservation strategies in the Mississippi Alluvial Valley (MAV) and several other wintering areas assume carrying capacity is limited by available food, and increasing food resources is an effective conservation goal. Because existing research on winter food abundance and depletion is insufficient to test this hypothesis, we used harvested rice fields as model foraging habitats to determine if waste rice seed is depleted before spring migration. We sampled rice fields ( n = 39 [winter 2000–2001], n = 69 [2001–2002]) to estimate seed mass when waterfowl arrived in late autumn and departed in late winter. We also placed exclosures in subsets of fields in autumn ( n = 8 [2000–2001], n = 20 [2001–2002]) and compared seed mass inside and outside exclosures in late winter to estimate rice depletion attributable to waterfowl and other processes. Finally, we used an experiment to determine if the extent of rice depletion differed among fields of varying initial abundance and if the seed mass at which waterfowl ceased foraging or abandoned fields differed from a hypothesized giving-up value of 50 kg/ha. Mean seed mass was greater in late autumn 2000 than 2001 (127.0 vs. 83.9 kg/ha; P = 0.018) but decreased more during winter 2000–2001 than 2001–2002 (91.3 vs. 55.7 kg/ha) and did not differ at the end of winter (35.8 vs. 28.3 kg/ha; P = 0.651). Assuming equal loss to deterioration inside and outside exclosures, we estimated waterfowl consumed 61.3 kg/ha (48.3%) of rice present in late autumn 2000 and 21.1 kg/ha (25.1%) in 2001. When we manipulated late-autumn rice abundance, mean giving-up mass of rice seed was similar among treatments (48.7 kg/ha; P = 0.205) and did not differ from 50 kg/ha ( P = 0.726). We integrated results by constructing scenarios in which waterfowl consumed rice at different times in winter, consumption and deterioration were competing risks, and consumption occurred only above 50 kg/ha. Results indicated waterfowl likely consumed available rice soon after fields were flooded and the amount consumed exceeded our empirical estimates but was ≤48% (winters pooled) of rice initially present. We suggest 1) using 50 kg/ha as a threshold below which profitability limits waterfowl feeding in MAV rice fields; 2) reducing the current estimate (130 kg/ha) of rice consumed in harvested fields to 47.2 kg/ha; and 3) increasing available rice by increasing total area of fields managed, altering management practices (e.g., staggered flooding), and exploring the potential for producing second or ratoon rice crops for waterfowl.

Arkansas;Illinois;Kentucky;Louisiana;Mississippi;M

Potential postwildfire debris-flow hazards: a prewildfire evaluation for the Sandia and Manzano Mountains and surrounding areas, central New Mexico

Wildfire can drastically increase the probability of debris flows, a potentially hazardous and destructive form of mass wasting, in landscapes that have otherwise been stable throughout recent history. Although there is no way to know the exact location, extent, and severity of wildfire, or the subsequent rainfall intensity and duration before it happens, probabilities of fire and debris-flow occurrence for different locations can be estimated with geospatial analysis and modeling efforts. The purpose of this report is to provide information on which watersheds might constitute the most serious, potential, debris-flow hazards in the event of a large-scale wildfire and subsequent rainfall in the Sandia and Manzano Mountains. Potential probabilities and estimated volumes of postwildfire debris flows in the unburned Sandia and Manzano Mountains and surrounding areas were estimated using empirical debris-flow models developed by the U.S. Geological Survey in combination with fire behavior and burn probability models developed by the U.S. Department of Agriculture Forest Service. The locations of the greatest debris-flow hazards correlate with the areas of steepest slopes and simulated crown-fire behavior. The four subbasins with the highest computed debris-flow probabilities (greater than 98 percent) were all in the Manzano Mountains, two flowing east and two flowing west. Volumes in sixteen subbasins were greater than 50,000 square meters and most of these were in the central Manzanos and the western facing slopes of the Sandias. Five subbasins on the west-facing slopes of the Sandia Mountains, four of which have downstream reaches that lead into the outskirts of the City of Albuquerque, are among subbasins in the 98th percentile of integrated relative debris-flow hazard rankings. The bulk of the remaining subbasins in the 98th percentile of integrated relative debris-flow hazard rankings are located along the highest and steepest slopes of the Manzano Mountains. One of the subbasins is several miles upstream from the community of Tajique and another is several miles upstream from the community of Manzano, both on the eastern slopes of the Manzano Mountains. This prewildfire assessment approach is valuable to resource managers because the analysis of the debris-flow threat is made before a wildfire occurs, which facilitates prewildfire management, planning, and mitigation. In northern New Mexico, widespread watershed restoration efforts are being carried out to safeguard vital watersheds against the threat of catastrophic wildfire. This study was initiated to help select ideal locations for the restoration efforts that could have the best return on investment.

New Mexico

Environmentally relevant chemical mixtures of concern in waters of United States tributaries to the Great Lakes

The North American Great Lakes are a vital natural resource that provide fish and wildlife habitat, as well as drinking water and waste assimilation services for millions of people. Tributaries to the Great Lakes receive chemical inputs from various point and nonpoint sources, and thus are expected to have complex mixtures of chemicals. However, our understanding of the co‐occurrence of specific chemicals in complex mixtures is limited. To better understand the occurrence of specific chemical mixtures in the US Great Lakes Basin, surface water from 24 US tributaries to the Laurentian Great Lakes was collected and analyzed for diverse suites of organic chemicals, primarily focused on chemicals of concern (e.g., pharmaceuticals, personal care products, fragrances). A total of 181 samples and 21 chemical classes were assessed for mixture compositions. Basin wide, 1664 mixtures occurred in at least 25% of sites. The most complex mixtures identified comprised 9 chemical classes and occurred in 58% of sampled tributaries. Pharmaceuticals typically occurred in complex mixtures, reflecting pharmaceutical‐use patterns and wastewater facility outfall influences. Fewer mixtures were identified at lake or lake‐influenced sites than at riverine sites. As mixture complexity increased, the probability of a specific mixture occurring more often than by chance greatly increased, highlighting the importance of understanding source contributions to the environment. This empirically based analysis of mixture composition and occurrence may be used to focus future sampling efforts or mixture toxicity assessments.

Integrated Environmental Assessment and Management

Development of a bioenergetics model for age-0 American shad

Bioenergetics modeling can be used as a tool to investigate the impact of non-native age-0 American shad ( Alosa sapidissima ) on reservoir and estuary food webs. The model can increase our understanding of how these fish influence lower trophic levels as well as predatory fish populations that feed on juvenile salmonids. Bioenergetics modeling can be used to investigate ecological processes, evaluate alternative research hypotheses, provide decision support, and quantitative prediction. Bioenergetics modeling has proven to be extremely useful in fisheries research (Ney et al. 1993,Chips and Wahl 2008, Petersen et al. 2008). If growth and diet parameters are known, the bioenergetics model can be used to quantify the relative amount of zooplankton or insects consumed by age-0 American shad. When linked with spatial and temporal information on fish abundance, model output can guide inferential hypothesis development to demonstrate where the greatest impacts of age-0 American shad might occur. Bioenergetics modeling is particularly useful when research questions involve multiple species and trophic levels (e.g. plankton communities). Bioenergetics models are mass-balance equations where the energy acquired from food is partitioned between maintenance costs, waste products, and growth (Winberg 1956). Specifically, the Wisconsin bioenergetics model (Hanson et al. 1997) is widely used in fisheries science. Researchers have extensively tested, reviewed, and improved on this modeling approach for over 30 years (Petersen et al. 2008). Development of a bioenergetics model for any species requires three key components: 1) determine physiological parameters for the model through laboratory experiments or incorporate data from a closely related species, 2) corroboration of the model with growth and consumption estimates from independent research, and 3) error analysis of model parameters. Wisconsin bioenergetics models have been parameterized for many of the salmonids and predatory fishes encountered in the lower Columbia River (Petersen and Ward 1999). The Wisconsin bioenergetics model has not been developed for American shad, however Limburg (1996) parameterized a simplified bioenergetics growth model for this species. A common application for the Wisconsin bioenergetics model is to estimate the consumption or growth of a fish population under different temperature and feeding scenarios (Ney 1993). One advantage of the bioenergetics approach is that consumption can be estimated without direct field measurements of predation rate (prey·predator -1 · day -1 ; Petersen and Ward 1999). Field estimates of fish consumption are time consuming and costly to determine, and estimates may show wide variance due to environmental and sampling variability. However, the consumption parameters used in a newly developed bioenergetics model must be verified with field and laboratory estimates of consumption (Ney 1993). The objective of this research was to parameterize a Wisconsin bioenergetics model for age-0 American shad using published physiological data on American shad and closely related alosine species. The American shad bioenergetics model will be used as a tool to explore various hypotheses about how age-0 American shad directly and indirectly affect Columbia River salmon through ecological interactions in lower Columbia River food webs. One over-arching focus of the larger research project was to identify potential interactions between age-0 American shad and juvenile salmonids, addressing potential outcomes through bioenergetics modeling scenarios. This report contains two bioenergetics modeling applications to demonstrate how these models can be used to address management questions and direct research effort. The first modeling application uses the American shad bioenergetics model described in this report to explore prey consumption by age-0 American shad (Chapter 1, this report). Dietary data on age-0 American shad and previously published reports on the diet of juvenile fall Chinook salmon (Rondorf et al. 1990, USGS unpublished data) suggested there might be considerable dietary overlap between these species in the lower Columbia River. The U.S. Geological Survey (USGS) was interested in using the American shad bioenergetics model to explore hypotheses concerning dietary overlap between age-0 American shad and emigrating fall Chinook salmon. The second modeling application uses the fall Chinook salmon bioenergetics model (Koehler et al. 2006) to explore the growth potential of juvenile fall Chinook salmon predating on age-0 American shad in the lower Columbia River. This modeling was based dietary information on a small number of age-0 fall Chinook salmon (n = 13) collected in John Day Reservoir in 1994 - 1996 (unpublished USGS data). Analysis of this dietary data found that these salmonids were feeding primarily on age-0 American shad (> 75% by weight).

Oregon

Application of surrogate technology to predict real-time metallic-contaminant concentrations and loads in the Clark Fork near Grant-Kohrs Ranch National Historic Site, Montana, water years 2019–20

Grant-Kohrs Ranch National Historic Site (GRKO) in southwestern Montana commemorates the frontier cattle era and its formative role in shaping the culture and history of the Western United States. The ranch was designated a national historic landmark in 1960 and a unit of the National Park Service (NPS) by Congress in 1972. The GRKO is unique because of its proximity to large-scale extraction, milling, and smelting of gold, silver, copper, and lead ore from the 1860s to the 1980s in the Butte mining district. During this time, mining and milling wastes were discarded in the upper Clark Fork Basin, resulting in the deposition of large amounts of waste materials (tailings) enriched with metallic contaminants (including cadmium, copper, iron, lead, manganese, zinc, and the metalloid trace element arsenic) in soils and in nearby streams and floodplains. Denuded vegetation and fish kills attributed to large concentrations of heavy metals caused the U.S. Environmental Protection Agency to designate a 120-mile section of the Clark Fork River (hereafter referred to as the “Clark Fork”), including GRKO, to be included on the National Priority List for Superfund cleanup in 1989. In 2018, with oversight from the Montana Department of Environmental Quality, the NPS began remediation of 2.6 miles of the Clark Fork as it flows through GRKO property. In 2019, the U.S. Geological Survey (USGS), in collaboration with the NPS, conducted a study using time-series data from backscatter signals from fixed-point turbidity and acoustic sensors with the intent to provide a high-resolution monitoring tool to estimate metallic-contaminant concentrations (MCCs) and loads during NPS remediation of the Clark Fork. Two monitoring sites at USGS streamgages on the Clark Fork on either side of GRKO property were instrumented with turbidity and acoustic sensors and surrogate relations were developed among time-series data and MCCs. The application of high-resolution surrogate data was used to infer contaminant source and fate and evaluate MCC values relative to aquatic-life standards. Using high-resolution surrogate data, it was determined that during spring runoff and storm-related runoff events, MCCs peaked at their highest values at streamflows markedly lower and prior to peak streamflow. Because MCCs peaked prior to streamflow peaks, it could be inferred that the source of MCCs originated from channel bed sediments in close spatial proximity to the monitoring site or from nearby streambanks and floodplains. High-resolution surrogate data revealed that copper concentrations in the Clark Fork exceeded chronic aquatic-life standards 90 percent of the time when streamflow exceeded 200 cubic feet per second (ft 3 /s) and exceeded acute aquatic-life standards 85 percent of the time when streamflow exceeded 260 ft 3 /s. These data helped support NPS management goals for evaluating variation in water quality during remediation of GRKO property, evaluating MCC values relative to aquatic-life standards, and quantifying benefits from Superfund remediation activities.

Montana

Assessing controls on perched saturated zones beneath the Idaho Nuclear Technology and Engineering Center, Idaho

Waste byproducts associated with operations at the Idaho Nuclear Technology and Engineering Center (INTEC) have the potential to contaminate the eastern Snake River Plain (ESRP) aquifer. Recharge to the ESRP aquifer is controlled largely by the alternating stratigraphy of fractured volcanic rocks and sedimentary interbeds within the overlying vadose zone and by the availability of water at the surface. Beneath the INTEC facilities, localized zones of saturation perched on the sedimentary interbeds are of particular concern because they may facilitate accelerated transport of contaminants. The sources and timing of natural and anthropogenic recharge to the perched zones are poorly understood. Simple approaches for quantitative characterization of this complex, variably saturated flow system are needed to assess potential scenarios for contaminant transport under alternative remediation strategies. During 2009-2011, the U.S. Geological Survey (USGS), in cooperation with the U.S. Department of Energy, employed data analysis and numerical simulations with a recently developed model of preferential flow to evaluate the sources and quantity of recharge to the perched zones. Piezometer, tensiometer, temperature, precipitation, and stream-discharge data were analyzed, with particular focus on the possibility of contributions to the perched zones from snowmelt and flow in the neighboring Big Lost River (BLR). Analysis of the timing and magnitude of subsurface dynamics indicate that streamflow provides local recharge to the shallow, intermediate, and deep perched saturated zones within 150 m of the BLR; at greater distances from the BLR the influence of streamflow on recharge is unclear. Perched water-level dynamics in most wells analyzed are consistent with findings from previous geochemical analyses, which suggest that a combination of annual snowmelt and anthropogenic sources (for example, leaky pipes and drainage ditches) contribute to recharge of shallow and intermediate perched zones throughout much of INTEC. The source-responsive fluxes model was parameterized to simulate recharge via preferential flow associated with intermittent episodes of streamflow in the BLR. The simulations correspond reasonably well to the observed hydrologic response within the shallow perched zone. Good model performance indicates that source-responsive flow through a limited number of connected fractures contributes substantially to the perched-zone dynamics. The agreement between simulated and observed perched-zone dynamics suggest that the source-responsive fluxes model can provide a valuable tool for quantifying rapid preferential flow processes that may result from different land management scenarios.

Scientific Investigations Report

Baseline water quality of an area undergoing shale-gas development in the Muskingum River watershed, Ohio, 2015–16

In 2015–16, the U.S. Geological Survey, in cooperation with the Muskingum Watershed Conservancy District, led a study to assess baseline (2015–16) surface-water quality in six lake drainage basins within the Muskingum River watershed that are in the early years of shale-gas development. In 2015, 9 of the 10 most active counties in Ohio for oil and gas development were wholly or partially within the Muskingum River watershed. In addition to shale gas development, the area has a history of conventional oil and gas development and coal mining. In all, 30 surface-water sites were sampled: 20 in tributaries flowing to the lakes, 4 in lakes themselves, and 6 downstream of the lakes. At each of the 30 sites, 6 samples were collected to characterize surface-water chemistry throughout a range of hydrologic conditions. The sampling generally occurred during low flows (periods of greater groundwater contribution) rather than during runoff events (periods of high stream stage). Trilinear diagrams of major ion chemistry revealed three main types of water in the study area―sulfate-dominated waters, bicarbonate-dominated waters, and waters with mixed bicarbonate and chloride anions. Most sites produced samples of bicarbonate-dominated water, and 11 sites produced samples with sulfate-type waters. Mixed bicarbonate and chloride waters were found in samples from two of the six lake drainage basins studied. The baseline (2015–16) assessment of surface-water quality in the study area indicated that few water-chemistry constituents and properties occurred at concentrations or levels that would adversely affect aquatic organisms. Chemical-specific, aquatic life use criteria were not met in only three instances: two were for total dissolved solids at sites likely impacted by coal mining in their drainage basins (hereafter referred to as “mine-impacted sites”), and one was for dissolved oxygen. Mine drainage from historical coal mining in the region likely affected the quality of about one-third of the streams sampled. To simplify interpretation of water-chemistry results, 11 sites with sulfate-type water were identified as mine-impacted sites based on water-quality criteria established by Ohio Department of Natural Resources, Division of Mineral Resources Management, and separated out for subsequent statistical analysis. Concentrations or levels of bicarbonate, boron, calcium, carbonate, total dissolved solids, fluoride, magnesium, lithium, pH, potassium, sodium, specific conductance, strontium, sulfate, and suspended sediment in water were higher (significance level of 0.05) at mine-impacted stream sites than at non-mine-impacted stream sites. An accidental release of oil- and gas-related brines could increase salinity (sodium and chloride), the concentration of total dissolved solids in shallow groundwater and streams, and specific conductance. For this study, chloride concentrations in the study area ranged from 2.12 to 76.1 milligrams per liter. Sources of chloride in water samples were evaluated using binary mixing curves and ratios of chloride to bromide. These ratios indicated that 13 samples from 3 sites in the drainage basin that contained the highest density of conventional oil and gas wells in the study, as well as 4 samples collected from other drainage basins, likely contained a component of brine. Concentrations or levels of barium, bromide, chloride, iron, lithium, manganese, and sodium were significantly higher (alpha = 0.05) in samples with a component of brine than in samples without a component of brine. Benzene, toluene, ethylbenzene and xylene (BTEX), compounds that occur naturally in crude oil, made up 24 of the 45 detections (53 percent) of volatile organic compounds in the study area. The BTEX detections were not associated with sites containing a component of brine. The only volatile organic compound detected in any of the 17 samples that contained a component of brine was acetone, detected in 3 (18 percent) of these samples and in 11 percent of samples not containing a component of brine. Considering that BTEX are gasoline hydrocarbons and that most of the detections occurred during warmer months in and around the lakes, the BTEX detections likely are associated with increases in outdoor activities such as automobile and boating traffic. Radium-226 and radium-228 were included in the list of analytes for this study because production water from shale-gas drilling can contain these naturally occurring radioactive materials. Concentrations of radium-226 exceeded background levels in only two surface-water samples. Concentrations of radium-228 exceeded background levels in one surface-water sample. A brine signature potentially indicative of oil and gas contamination was detected in samples collected at two sites that contained active or plugged waste injection wells, or both. Results from the study indicated significant differences in the median concentrations of bromide, chloride, lithium, manganese, sodium, and total dissolved nitrogen between sites with and without injection wells in their drainage areas. Median concentrations of bromide, chloride, lithium, and sodium, which are common oil- and gas-related contaminants, were higher at sites with injection wells in their drainage areas compared to sites without injection wells. Historical (1960s, 1970s, and 1980s) chloride concentrations and streamflow data at or near five of the six sampling sites downstream from each lake dam were compared to current (2015–16) values. An analysis of covariance was done to test the effects of streamflow, time (decade), and the combined effects (cross product) of streamflow and time on chloride concentrations. Those analyses indicated that streamflow was not significant in explaining the variation in chloride concentration, likely because streamflow in those locations is controlled by dam operations; therefore, association between runoff-generating events and streamflow is less direct than in unregulated streams. From the 1980s to the study period (2015–16), data for three of the five lakes indicated an increase in chloride concentrations. The comparison of historical and current (2015–16) study data from samples collected at another lake indicated that chloride concentrations increased from the 1960s to the 1970s, but concentrations in the 1970s and 2015–16 were similar even though 13 samples from this lake drainage basin were classified as having a component of brine. Median chloride concentrations for the fifth lake, however, seemed to decrease from the 1980s to 2015–16.

Ohio

Phosphorus and groundwater: Establishing links between agricultural use and transport to streams

Phosphorus is a highly reactive element that is essential for life and forms a variety of compounds in terrestrial and aquatic ecosystems. In water, phosphorus may be present as the orthophosphate ion (PO 4 3- ) and is also present in all life forms as an essential component of cellular material. In natural ecosystems, phosphorus is derived from the erosion of rocks and is conserved for plant growth as it is returned to the soil through animal waste and the decomposition of plant and animal tissue; but in agricultural systems, a portion of the phosphorus is removed with each harvest, especially since phosphorus is concentrated in the seeds and fruit. Phosphorus is added to soil by using chemical fertilizers, manure, and composted materials. Agricultural use of chemical phosphorus fertilizer, in the United States, in 2008 was 4,247,000 tons, which is an increase of 25 percent since 1964 (http://www.ers.usda.gov/Data/FertilizerUse/). Widely grown corn, soybeans, and wheat use the greatest amount of phosphorus fertilizer among agricultural crops. Phosphorus is largely retained in soil by a process called adsorption. Soils have a limited capacity to store phosphorus, and once the capacity of soil to adsorb phosphorus is exceeded, the excess will dissolve and move more freely with water either directly to a stream or downward to an aquifer. Surface-water runoff from rainstorms or excess irrigation is the primary way that phosphorus or soil containing phosphorus is transported to streams in most watersheds. There is a growing awareness that long-term over-application of manure and chemical fertilizer contributes to phosphorus movement into the groundwater system, resulting in a significant groundwater source of phosphorus to streams and lakes, as well as potential contamination of the groundwater resources. Leaching of applied fertilizer and surface runoff of phosphorus from the soil can contribute to excess growth of algae in downstream water bodies, a condition known as eutrophication. Excessive amounts of algae in eutrophic water bodies can cause large daily changes in the amount of dissolved oxygen in the water because oxygen concentrations tend to be high during daylight hours as a result of photosynthetic activity but then decrease at night. Low concentrations of dissolved oxygen can stress or kill sensitive species living in the water. This study examined concentrations and movement of phosphorus in the soils and groundwater in five agricultural settings across the United States characterized by differences in soil geochemistry, climate, irrigation usage, and cropping systems to assess potential phosphorus movement in the soil and groundwater under common agricultural conditions. The study design included assessment of a variety of agricultural practices, especially cropping patterns and irrigation, so that the factors that contribute to phosphorus movement to groundwater, or sequestration of the phosphorus to soil could be compared and examined. This type of information could potentially be used to formulate best management practices to limit the transport of phosphorus from the agricultural fields.

Fact Sheet

Status and trends monitoring of the mainstem Columbia River: sample frame development and review of programs relevant to the development of an integrated approach to monitoring

Implementing an Integrated Status and Trends Monitoring program (ISTM) for the mainstem Columbia River will help identify trends in important natural resources and help us understand the long-term collective effects of management actions. In this report, we present progress towards the completion of a stepwise process that will facilitate the development of an ISTM for the mainstem Columbia River. We discuss planning and regulatory documents that can be used to identify monitoring goals and objectives and present existing monitoring and research activities that should be considered as the development of a Columbia River ISTM proceeds. We also report progress towards the development of sample frames for the Columbia and Snake Rivers and their floodplains. The sample frames were formulated using Digital Elevation Models (DEM’s) of the river channel and upland areas and a Generalized Random-Tessellation Stratified (GRTS) algorithm for an area based resource to generate “master sample(s).” Working with the Pacific Northwest Aquatic Monitoring Partnership (PNAMP) we facilitated the transfer of the sample frames to the PNAMP “Monitoring Sample Designer” tool. We then discuss aspects of response and survey designs as they pertain to the formulation of a mainstem Columbia River ISTM. As efforts to formulate an ISTM for the mainstem Columbia River proceed, practitioners should utilize the extensive literature describing the planning and implementation of fish and wildlife mitigation and recovery efforts in the Columbia River Basin. While we make progress towards establishing an ISTM framework, considerable work needs to be done to formulate an ISTM program for the mainstem Columbia River. Long-term monitoring programs have been established for other large rivers systems; scientists that have experience planning, implementing, and maintaining large river monitoring efforts such as those in the Colorado, Illinois, and Mississippi Rivers should be consulted and involved as efforts proceed.

Idaho;Oregon;Washington