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At least 397 records · Page 22Linked to original sources
USGS2010

Hydrology, phenology and the USA National Phenology Network

Phenology is the study of seasonally-recurring biological events (such as leaf-out, fruit production, and animal reproduction and migration) and how these events are influenced by environmental change. Phenological changes are some of the most sensitive biological indicators of climate change, and also affect nearly all aspects of ecosystem function. Spatially extensive patterns of phenological observations have been closely linked with climate variability. Phenology and hydrology are closely linked and affect one another across a variety of scales, from leaf intercellular spaces to the troposphere, and over periods of seconds to centuries. Ecosystem life cycles and diversity are also influenced by hydrologic processes such as floods and droughts. Therefore, understanding the relationships between hydrology and phenology is increasingly important in understanding how climate change affects biological and physical systems.

Fact Sheet↗
USGS2024

READI-Net—Providing tools for the early detection and management of aquatic invasive species

Overview Early detection of biological threats, such as invasive species, increases the likelihood that control efforts will be successful and cost-effective. Environmental deoxyribonucleic acid (eDNA) sampling is an established method for the efficient and sensitive early detection of new biological threats. The Rapid eDNA Assessment and Deployment Initiative & Network (READI-Net) is a project designed with partners to provide a full suite of tools to maximize the power of eDNA sampling for detecting invasive species. The READI-Net suite of tools will include the availability of autonomous eDNA samplers, multispecies molecular DNA detection tools, strategic sample design, standardized and repeatable lab analysis, and a communication framework to deliver eDNA detection results to inform invasive species science, policy, and management. The READI-Net project is part of a national strategy to implement eDNA sampling for the early detection of and rapid response to biological threats.

Fact Sheet↗
USGS1978

A water-quality assessment of the Muddy Fork Silver Creek watershed, Clark, Floyd, and Washington counties, Indiana

Data collected for a wide range of flow conditions from September 8, 1975, to July 13, 1976, reveal that human and animal waste loading of streams and pesticide use in the watershed are probably the most significant water-quality problems. Generally, the type(s) of water in tributary streams in the south and southwest parts of the watershed was calcium bicarbonate and in other tributaries were calcium sulfate and magnesium sulfate. Dissolved-solids concentrations of discharge from top-spill reservoirs were lower and more consistent over a range of flows than concentrations from uncontrolled streams. Chemical characteristics of discharges from bottom-draw reservoirs differed from those of discharges from the other reservoirs. More than half the manganese concentrations equaled or exceeded 0.05 milligrams per liter, the maximum concentration recommended for domestic water supplies. Leaf fall in forested parts of the watershed are probably a source of this manganese. Nitrate (as nitrogen) concentration of streams ranged from 0.00 to 2.5 milligrams per liter; orthophosphate (as phosphorus), from 0.00 to 0.29 milligrams per liter, and total organic carbon, from 2.0 to 14 milligrams per liter. Concentrations of fecal coliform bacteria and fecal streptococcal bacteria ranged from 5 to 65,000 colonies per 100 milliliters and from 5 to 24,000 colonies per 100 milliliters, respectively. Occasional human-waste contamination is indicated downstream from the towns of Borden and Speed. Data on periphyton, phytoplankton, and benthic communities collected during low flow in September 1975 indicate organic loading of Muddy Fork downstream from the town of Speed. Phytoplankton community structures varied temporally and spatially. Ranges of concentration of various chlorinated hydrocarbons in samples of bed materials (in micrograms per kilogram) were: chlordane, from 0 to 14; DDT, from 0 to 19; and PCB's, from 0 to 11. Concentrations of aldrin, DDD, DDE, heptachlor, and heptachlor epoxide of 5.1 micrograms per kilogram or less were also detected. The presence of these compounds makes them potentially available for accumulation in the biological food chain.

Indiana↗
USGS2014

Extending the turbidity record: making additional use of continuous data from turbidity, acoustic-Doppler, and laser diffraction instruments and suspended-sediment samples in the Colorado River in Grand Canyon

Turbidity is a measure of the scattering and absorption of light in water, which in rivers is primarily caused by particles, usually sediment, suspended in the water. Turbidity varies significantly with differences in the design of the instrument measuring turbidity, a point that is illustrated in this study by side-by-side comparisons of two different models of instruments. Turbidity also varies with changes in the physical parameters of the particles in the water, such as concentration, grain size, grain shape, and color. A turbidity instrument that is commonly used for continuous monitoring of rivers has a light source in the near-infrared range (860±30 nanometers) and a detector oriented 90 degrees from the incident light path. This type of optical turbidity instrument has a limited measurement range (depending on pathlength) that is unable to capture the high turbidity levels of rivers that carry high suspended-sediment loads. The Colorado River in Grand Canyon is one such river, in which approximately 60 percent of the range in suspended-sediment concentration during the study period had unmeasurable turbidity using this type of optical instrument. Although some optical turbidimeters using backscatter or other techniques can measure higher concentrations of suspended sediment than the models used in this study, the maximum turbidity measurable using these other turbidimeters may still be exceeded in conditions of especially high concentrations of suspended silt and clay. In Grand Canyon, the existing optical turbidity instruments remain in use in part to provide consistency over time as new techniques are investigated. As a result, during these periods of high suspended-sediment concentration, turbidity values that could not be measured with the optical turbidity instruments were instead estimated from concurrent acoustic attenuation data collected using side-looking acoustic-Doppler profiler (ADP) instruments. Extending the turbidity record to the full range of sediment concentrations in the study area using data from the ADP instruments is particularly useful for biological studies. In Grand Canyon, turbidity has been correlated with food availability for aquatic organisms (gross primary production) as well as with fish behavior specific to predator-prey interactions. On the basis of the complete “extended” turbidity record and the relation between suspended-sediment concentration and turbidity, levels were higher before the construction of Glen Canyon Dam by a factor of approximately 2,000 at the Lees Ferry monitoring station (15 miles downstream from the dam) and by a factor of approximately 20 at the monitoring station 87 miles downstream from Lees Ferry (102 miles downstream from the dam). A comparison of turbidity data with data from Laser In-Situ Scattering and Transmissometry (LISST) laser-diffraction instruments, suspended-sediment concentration data, and ADP data shows the influence of the physical properties of suspended sediment. Apparent outliers in relations between turbidity, ADP, and suspended-sediment data during two events within the study period, a 2007 tributary flood from a watershed altered by a recent wildfire and a 2008 experimental controlled-flood release from Glen Canyon Dam, are explained in part by atypical grain sizes, shapes, densities, colors, and (or) clay mineral assemblages of suspended sediment occurring in the Colorado River during these two events. These analyses demonstrate the value of using multiple data-collection strategies for turbidity and sediment-transport studies and of continuous monitoring for capturing the full range and duration of turbidity and sediment-transport conditions, identifying the provenance of the sediment causing turbidity, and detecting physical and chemical processes that may be important for management of critical physical and biological resources.

Arizona↗
USGS1994

Sources and transport of sediment, nutrients, and oxygen-demanding substances in the Minnesota River basin, 1989-92

The Minnesota River, 10 major tributaries, and 21 springs were sampled to determine the sources and transport of sediment, nutrients, and oxygen- demanding substances. The study was part of a four-year assessment of non-point source pollution in the Minnesota River Basin. Runoff from tributary watersheds was identified as the primary source of suspended sediment and nutrients in the Minnesota River mainstem. Suspended-sediment, phosphorus, and nitrate concentrations were elevated in all major tributaries during runoff, but tributaries in the south-central and eastern part of the basin produce the highest annual loading to the mainstem because of higher annual precipitation and runoff in that part of the basin. Particle-size analyses showed that most of the suspended sediment in transport consisted of silt- and clay-size material. Phosphorus enrichment was indicated throughout the mainstem by total phosphorus concentrations that ranged from 0.04 to 0.48 mg/L with a median value of 0.22 mg/L, and an interquartile range of 0.15 to 0.29 mg/L. Nitrate concentrations periodically exceeded drinking water standards in tributaries draining the south-central and eastern part of the basin. Oxygen demand was most elevated during periods of summer low flow. Correlations between levels of biochemical oxygen demand and levels of algal productivity suggest that algal biomass comprises much of the oxygen-demanding material in the mainstem. Transport of sediment, nutrients, and organic carbon within the mainstem was found to be conservative, with nearly all tributary inputs being transported downstream. Uptake and utilization of nitrate and orthophosphorus was indicated during low flow, but at normal and high flow, inputs of these constituents greatly exceeded biological utilization.

Minnesota, South Dakota↗
USGS2001

Discharge between San Antonio Bay and Aransas Bay, southern Gulf Coast, Texas, May-September 1999

Along the Gulf Coast of Texas, many estuaries and bays are important habitat and nurseries for aquatic life. San Antonio Bay and Aransas Bay, located about 50 and 30 miles northeast, respectively, of Corpus Christi, are two important estuarine nurseries on the southern Gulf Coast of Texas (fig. 1). According to the Texas Parks and Wildlife Department, “Almost 80 percent of the seagrasses [along the Texas Gulf Coast] are located in the Laguna Madre, an estuary that begins just south of Corpus Christi Bay and runs southward 140 miles to South Padre Island. Most of the remaining seagrasses, about 45,000 acres, are located in the heavily traveled San Antonio, Aransas and Corpus Christi Bay areas” (Shook, 2000). Population growth has led to greater demands on water supplies in Texas. The Texas Water Development Board, the Texas Parks and Wildlife Department, and the Texas Natural Resource Conservation Commission have the cooperative task of determining inflows required to maintain the ecological health of the State’s streams, rivers, bays, and estuaries. To determine these inflow requirements, the three agencies collect data and conduct studies on the need for instream flows and freshwater/ saline water inflows to Texas estuaries. To assist in the determination of freshwater inflow requirements, the U.S. Geological Survey (USGS), in cooperation with the Texas Water Development Board, conducted a hydrographic survey of discharge (flow) between San Antonio Bay and Aransas Bay during the period May–September 1999. Automated instrumentation and acoustic technology were used to maximize the amount and quality of data that were collected, while minimizing personnel requirements. This report documents the discharge measured at two sites between the bays during May–September 1999 and describes the influences of meteorologic (wind and tidal) and hydrologic (freshwater inflow) conditions on discharge between the two bays. The movement of water between the bays is controlled primarily by prevailing winds, tidal fluctuations, and freshwater inflows. An adequate understanding of mixing and physical exchange in the estuarine waters is fundamental to the assessment of the physical, chemical, and biological processes governing the aquatic system.

Texas↗
USGS1997

Activities of the National Water-Quality Assessment Program in the upper Snake River Basin, Idaho and western Wyoming, 1991-2001

In 1991, the U.S. Geological Survey (USGS) began a full-scale National Water-Quality Assessment (NAWQA) Program. The long-term goals of the NAWQA Program are to describe the status and trends in the water quality of a large part of the Nation's rivers and aquifers and to improve understanding of the primary natural and human factors that affect water-quality conditions. In meeting these goals, the program will produce water-quality, ecological, and geographic information that will be useful to policy makers and managers at the national, State, and local levels. A major component of the program is study-unit investigations, upon which national-level assessment activities are based. The program's 60 study-unit investigations are associated with principal river basins and aquifer systems throughout the Nation. Study units encompass areas from 1,200 to more than 65,000 mi2 (square miles) and incorporate about 60 to 70 percent of the Nation's water use and population served by public water supply. In 1991, the upper Snake River Basin was among the first 20 NAWQA study units selected for implementation. From 1991 to 1995, a high-intensity data-collection phase of the upper Snake River Basin study unit (fig. 1) was implemented and completed. Components of this phase are described in a report by Gilliom and others (1995). In 1997, a low-intensity phase of data collection began, and work continued on data analysis, report writing, and data documentation and archiving activities that began in 1996. Principal data-collection activities during the low-intensity phase will include monitoring of surface-water and ground-water quality, assessment of aquatic biological conditions, and continued compilation of environmental setting information.

Wyoming↗
USGS2001

Large carbon isotope fractionation associated with oxidation of methyl halides by methylotrophic bacteria

The largest biological fractionations of stable carbon isotopes observed in nature occur during production of methane by methanogenic archaea. These fractionations result in substantial (as much as ≈70‰) shifts in δ 13 C relative to the initial substrate. We now report that a stable carbon isotopic fractionation of comparable magnitude (up to 70‰) occurs during oxidation of methyl halides by methylotrophic bacteria. We have demonstrated biological fractionation with whole cells of three methylotrophs (strain IMB-1, strain CC495, and strain MB2) and, to a lesser extent, with the purified cobalamin-dependent methyltransferase enzyme obtained from strain CC495. Thus, the genetic similarities recently reported between methylotrophs, and methanogens with respect to their pathways for C 1 -unit metabolism are also reflected in the carbon isotopic fractionations achieved by these organisms. We found that only part of the observed fractionation of carbon isotopes could be accounted for by the activity of the corrinoid methyltransferase enzyme, suggesting fractionation by enzymes further along the degradation pathway. These observations are of potential biogeochemical significance in the application of stable carbon isotope ratios to constrain the tropospheric budgets for the ozone-depleting halocarbons, methyl bromide and methyl chloride. Methyl bromide (MeBr) and methyl chloride (MeCl) are, respectively, the most abundant volatile bromo- and chlorocarbons in the troposphere and are major contributors to stratospheric ozone destruction (1). Both compounds have natural and human-influenced sources and a predominant sink by reaction with OH in the troposphere (2–4). MeBr also has a bacterial soil sink (5) that represents about 20% of the estimated total removal from the troposphere, and it is likely that a soil sink of similar magnitude exists for MeCl (6). Hence, if an isotopic fractionation is associated with the soil sink, it will influence the isotopic compositions of MeBr and MeCl in the lower atmosphere (7). The δ 13 C value of industrially produced MeBr ranges between −43.5‰ and −66.4‰ (7), but δ 13 C values of tropospheric MeBr and natural sources are not yet known. The δ 13 C of atmospheric MeCl has been measured from −22‰ to −45‰ (8, 9). If carbon isotope ratios are to be used to constrain the budgets of these methyl halides, it is essential to determine the extent of carbon isotope fractionation that occurs during biological degradation of these compounds. Methylotrophic bacteria use C 1 compounds, which are simple organic molecules that contain no carbon–carbon bonds. Strains IMB-1, CC495, and MB2 are as-yet-unnamed facultative methylotrophs isolated from agricultural soil, woodland leaf litter, and coastal seawater, respectively (10–13), environments where methyl halides are produced. They are members of the α subgroup of the Proteobacteria . On the basis of 16S rRNA gene sequences, strains IMB-1 and CC495 show some phylogenetic alignment with the genus Rhizobium (10, 11) and are very closely related to the new genus Pseudoaminobacte r (I. McDonald, personal communication). Strain MB2 aligns within the Ruegeria clade [J. K. Schaefer, K. D. Goodwin, I. R. McDonald, J. C. Murrell and R.S.O., unpublished work]. All of these aerobic bacteria are methylotrophs in that they can grow by using MeBr or MeCl as their sole carbon source, but they do not metabolize methane. They oxidize MeBr, MeCl, and methyl iodide (MeI) to CO 2 . Soil bacteria are known to consume MeBr at the ambient tropospheric mixing ratio of around 10 parts per trillion by volume (5). Preliminary experiments with strain IMB-1 indicate that it can oxidize MeBr at these mixing ratios** and is therefore likely to be characteristic of bacteria associated with MeBr uptake by soils. We examined δ 13 C of MeCl, MeBr, and MeI during oxidation by whole-cell suspensions of IMB-1 and CC495 and also the change in δ 13 C values of the three methyl halides during oxidation by the marine strain MB2. In addition, we measured the fractionation of carbon isotopes during formation of methane thiol (MeSH) from MeCl by the purified cobalamin-dependent enzyme, halomethane:bisulphide/halide ion methyltransferase (11) from CC495, to determine whether this initial step in MeCl degradation could account for the observed fractionation by whole cells. Finally, we determined the fractionation associated with the degradation of MeBr during field studies with agricultural soil by monitoring MeBr concentration and δ 13 C of MeBr in the headspace of flux chambers under fumigation conditions.

Proceedings of the National Academy of Sciences of↗
USGS2012

Olympic Fisher Reintroduction Project: Progress report 2008-2011

This progress report summarizes the final year of activities of Phase I of the Olympic fisher restoration project. The intent of the Olympic fisher reintroduction project is to reestablish a self-sustaining population of fishers on the Olympic Peninsula. To achieve this goal, the Olympic fisher reintroduction project released 90 fishers within Olympic National Park from 2008 to 2010. The reintroduction of fishers to the Olympic Peninsula was designed as an adaptive management project, including the monitoring of released fishers as a means to (1) evaluate reintroduction success, (2) investigate key biological and ecological traits of fishers, and (3) inform future reintroduction, monitoring, and research efforts. This report summarizes reintroduction activities and preliminary research and monitoring results completed through December 2011. The report is non-interpretational in nature. Although we report the status of movement, survival, and home range components of the research, we have not completed final analyses and interpretation of research results. Much of the data collected during the monitoring and research project will be analyzed and interpreted in the doctoral dissertation being developed by Jeff Lewis; the completion of this dissertation is anticipated prior to April 2013. We anticipate that this work, and analyses of other data collected during the project, will result in several peer-reviewed scientific publications in ecological and conservation journals, which collectively will comprise the final reporting of work summarized here. These publications will include papers addressing post-release movements, survival, resource selection, food habits, and age determination of fishers.

Report↗
USGS2012

Future scenarios of land-use and land-cover change in the United States--the Marine West Coast Forests Ecoregion

Detecting, quantifying, and projecting historical and future changes in land use and land cover (LULC) has emerged as a core research area for the U.S. Geological Survey (USGS). Changes in LULC are important drivers of changes to biogeochemical cycles, the exchange of energy between the Earth’s surface and atmosphere, biodiversity, water quality, and climate change. To quantify the rates of recent historical LULC change, the USGS Land Cover Trends project recently completed a unique ecoregion-based assessment of late 20th century LULC change for the western United States. To characterize present LULC, the USGS and partners have created the National Land Cover Database (NLCD) for the years 1992, 2001, and 2006. Both Land Cover Trends and NLCD projects continue to evolve in an effort to better characterize historical and present LULC conditions and are the foundation of the data presented in this report. Projecting future changes in LULC requires an understanding of the rates and patterns of change, the major driving forces, and the socioeconomic and biophysical determinants and capacities of regions. The data presented in this report is the result of an effort by USGS scientists to downscale the Intergovernmental Panel on Climate Change (IPCC) Special Report on Emission Scenarios (SRES) to ecoregions of the conterminous United States as part of the USGS Biological Carbon Sequestration Assessment. The USGS biological carbon assessment was mandated by Section 712 of the Energy Independence and Security Act of 2007. As part of the legislative mandate, the USGS is required to publish a methodology describing, in detail, the approach to be used for the assessment. The development of future LULC scenarios is described in chapter 3.2 and appendix A. Spatial modeling is described in chapter 3.3.2 and appendix B and in Sohl and others (2011). In this report, we briefly summarize the major components and methods used to downscale IPCC-SRES scenarios to ecoregions of the conterminous United States, followed by a description of the Marine West Coast Forests Ecoregion, and lastly a description of the data being published as part of this report.

California;Oregon;Washington↗
USGS1975

Lakes of Oregon, Volume 3: Hood River, Multnomah, Washington and Yamhill Counties

An inventory of lakes and reservoirs of Oregon is essential for a complete evaluation of the total surface-water supply of the State and to provide a basis for answering questions about Oregon's lakes. Much of the information on lakes and reservoirs previously collected by Federal and State agencies has never been published. These data were compiled and used as a basis for collecting additional information. This report provides information for use by city, county, and State planning groups as well as for sportsmen, tourists, and others interested in preserving the recreational value of Oregon's lakes. Because of the large number of lakes and reservoirs in Oregon, a single report covering the State would be bulky. Therefore, the lake information is being published in several volumes on a county or multicounty basis. Volume 1, published in 1973, covered Clatsop, Columbia, and Tillamook Counties; volume 2, published in 1974, included Benton, Lincoln, and Polk Counties. Hood River, Multnomah, Washington, and Yamhill Counties were selected for volume 3. (See fig. 1.) In addition to office compilation of existing data, each lake was also visited. Most visits were made in summer or early fall when lakes were most accessible and when water temperature and biological activitiy were at a maximum.

Oregon↗
USGS2010

Polycyclic aromatic hydrocarbons in soil of the Canadian River floodplain in Oklahoma

The accumulation of polycyclic aromatic hydrocarbons (PAH) in soil, plants, and water may impart negative effects on ecosystem and human health. We quantified the concentration and distribution of 41 PAH (n = 32), organic C, total N, and S (n = 140) and investigated PAH sources using a chronosequence of floodplain soils under a natural vegetation succession. Soil samples were collected between 0- and 260-cm depth in bare land (the control), wetland, forest, and grassland areas near a closed municipal landfill and an active asphalt plant (the contaminant sources) in the north bank of the Canadian River near Norman, OK. Principal component, cluster, and correlation analyses were used to investigate the spatial distribution of PAH, in combination with diagnostic ratios to distinguish pyrogenic vs. petrogenic PAH suites. Total PAH concentration (SigmaPAH) had a mean of 1300 ng g(-1), minimum of 16 ng g(-1), and maximum of 12,000 ng g(-1). At 0- to 20-cm depth, SigmaPAH was 3500 +/- 1600 ng g(-1) (mean +/- 1 SE) near the contaminant sources. The most common compounds were nonalkylated, high molecular weight PAH of pyrogenic origin, i.e., fluoranthene (17%), pyrene (14%), phenanthrene (9%), benzo(b)fluoranthene (7%), chrysene (6%), and benzo(a)anthracene (5%). SigmaPAH in the control (130 +/- 23 ng g(-1)) was comparable to reported concentrations for the rural Great Plains. Perylene had a unique distribution pattern suggesting biological inputs. The main PAH contamination mechanisms were likely atmospheric deposition due to asphalt production at the 0- to 20-cm depth and past landfill operations at deeper depths.

Journal of Environmental Quality↗
USGS1977

Shelled benthic fauna of the eastern Chukchi Sea

The purposes of this study were to identify the benthic shelled infauna and epifauna of the eastern Chukchi Sea, compile species lists and distribution maps, determine recurrent groups of species (communities), and examine the environmental parameters that may control the distribution of the faunal groups. The study was partly supported by the Bureau of Land Management through an interagency agreement with the National Oceanic and Atmospheric Administration, under which a multi-year program responding to the needs of petroleum development of the Alaskan continental shelf is managed by the Outer Continental Shelf Environmental Assessment Program (OCSEAP) Office. The objective of this study is to provide an assessment of the biological patterns of the region as related to petroleum development. Future offshore oil leases proposed by the State of Alaska and the Federal Government require a biological data base from which impact statements can be derived. Samples used in this report were collected by the U.S. Geological Survey in August 1974 from the U.S. Coast Guard Cutter Burton Island under the direction of Arthur Grantz. Sampling was conducted using van Veen grabs, gravity cores, dart cores, and bottom dredges. Only the van Veen grabs contained material useful for this study. At present 103 samples containing 90 species have been examined.

Alaska↗
USGS1997

Activities of the United States Geological Survey in Pennsylvania

Since the late 1800's, when the U.S. Geological Survey first established a presence in Pennsylvania, the focus of our work has changed from general hydrologic and geologic appraisals to issue-oriented investigations; from predominantly data collection to a balanced program of data collection, interpretation, and research; and from traditional, hand-drawn mapping to digitally produced coverages with specialized themes. Yet our basic mission has not changed. It is as relevant to the resource issues of today as it was when our geologists first arrived in western Pennsylvania in 1884. Continuing in this proud heritage and tradition, the U.S. Geological Survey is moving confidently toward the next century, evolving organizationally and technologically to better meet the needs of our many constituencies. One major organizational change is the recent accession of employees from the former National Biological Service, who now form the Survey's fourth program division, the Biological Resources Division. These employees join forces with colleagues in our other three divisions: Water Resources, Geologic, and National Mapping. More than any other change in decades, the addition of this biological expertise creates new and exciting opportunities for scientific research and public service. This report provides an overview of recent activities in Pennsylvania conducted by the four program divisions and is intended to inform those interested in U.S. Geological Survey products and services. Additional information is available on our home page (at http://wwwpah2o.er.usgs.gov/). Together with numerous Federal, State, and local agencies and organizations who are our customers and partners, we at the U.S. Geological Survey look forward to providing continued scientific contributions and public service to Pennsylvania and the Nation.

Pennsylvania↗
USGS2025

Potential water-quality and hydrology stressors on freshwater mussels with development of environmental DNA assays for selected mussels and macroinvertebrates in Big Darby Creek Basin, Ohio, 2020–22

The richness and abundance of freshwater mussels in the Big Darby Creek Basin has declined in recent decades, according to survey results published by the Ohio Biological Survey. In October 2016, a major mussel die-off of undetermined cause reportedly affected over 50 miles of Big Darby Creek; however, fishes and other wildlife were not noticeably impacted. Pollution, habitat destruction, climate change, and hydrologic modification have all been theorized as potential reasons for the widespread declines in freshwater mussel populations in North America. To better understand potential stressors to mussels and other aquatic organisms in the Big Darby Creek Basin, the U.S. Geological Survey, in cooperation with the Ohio Water Development Authority, evaluated water quality and temporal changes in hydrology at selected locations. In addition, environmental deoxyribonucleic acid (eDNA) quantitative polymerase chain reaction (qPCR) assays were developed to detect the presence of selected mussels and macroinvertebrates using stream water. Time-weighted average concentrations of pesticides, organic wastewater compounds (OWCs), and polycyclic aromatic hydrocarbons (PAHs) were determined for selected locations within the Big Darby Creek Basin. Passive samplers designed to mimic the respiratory exposure of aquatic organisms and the bioconcentration of organic contaminants into their fatty tissues were deployed three times annually at three sites within the Big Darby Creek Basin in 2020 and 2021. Analyses were done for 204 pesticide compounds, 38 OWCs, and 33 PAHs. Of the 204 pesticide compounds, 70 were detected in at least one sample; 30 were detected in all samples. Herbicides and herbicide degradates were the pesticides most frequently detected and also had some of the highest concentrations of the pesticides detected in this study. Three herbicides (atrazine, ametryn, and metribuzin) were detected in at least 88 percent of samples and two fungicides (azoxystrobin and propiconazole) were detected in all samples. Of the 38 OWCs, 24 were detected in at least one sample; however, only one ( N , N -diethyltoluamide [DEET]) was detected in all samples. Of the 33 PAHs, 29 were detected in at least one sample; 12 were detected in all samples. A continuous water-quality monitor was operated seasonally on Big Darby Creek above Georgesville, Ohio, from 2020 to 2022. Dissolved oxygen concentrations generally followed a daily cycle, peaking in early evening and troughing around sunrise. There were occasional 24-hour swings in dissolved oxygen concentration that had a range exceeding 10 milligrams per liter. However, dissolved oxygen concentrations never fell below Ohio’s aquatic life criteria for warmwater habitats (outside of mixing zones) of 4.0 milligrams per liter as an instantaneous minimum and 5.0 milligrams per liter as a minimum 24-hour average. The Ohio water-quality criteria for temperatures are 29.4 degrees Celsius as an instantaneous maximum and 27.8 degrees Celsius as a 24-hour average maximum. In 2020, there were 10 days when the maximum instantaneous value for temperature was exceeded and 3 consecutive days when the maximum 24-hour average temperature was exceeded. Streamflow time-series data from three gaging stations within the Big Darby Creek Basin were evaluated for trends in annual flow statistics and daily nonexceedance probabilities over time. In general, the evaluation of streamflow conditions at the Big Darby Creek gage (with 97 years of record) indicated that streamflow changed between water years 1922 and 2021. During that time span, flows in general increased, the number of high-flow pulses became more frequent, and low-flow pulses and extreme low-flow periods became less frequent. The only strong indication of trends over time in annual flow statistics for the relatively short records for the other two gages (on Little Darby Creek, with 25 years of record, and Hellbranch Run, with 29 years of record) was that as time went on, reversals between rising and falling periods became more frequent. The U.S. Geological Survey Ohio Water Microbiology Laboratory developed eDNA qPCR assays to detect Epioblasma rangiana (northern riffleshell mussels), Chimarra obscura (a species of caddisfly), Maccaffertium pulchellum (a species of mayfly), and optimized a preexisting eDNA qPCR assay to detect for Ptychobranchus fasciolaris (kidneyshell mussels). The assays were validated by using environmental sampling methods. Assay sensitivity was established by determining the limits of detection and quantification. Water samples were collected at 12 sites in the Big Darby Creek Basin between 2020 and 2022 and analyzed for eDNA with the qPCR assays developed for this study.

Ohio↗
USGS2024

A data exchange standard for wadeable stream habitat monitoring data

Data from wadeable streams collected by monitoring programs are used to assess watershed condition status and trends. Federally managed programs collect a suite of similar habitat measurements using compatible methods and produce individual program datasets for their prescribed geographic and temporal range. We identified four programs that produce similar data: the Bureau of Land Management Assessment, Inventory, and Monitoring lotic division, the U.S. Environmental Protection Agency National Aquatic Resource Surveys National Rivers and Streams Assessment survey section, the Federal interagency Aquatic and Riparian Effectiveness Monitoring Program, and the PacFish/InFish Biological Opinion Monitoring Program. Their datasets answer agency-specific management questions and fulfill reporting requirements, but the datasets are not released in full, or at all, and in some cases, there was no method to integrate data from the four programs to provide data at a larger spatial scale. The Pacific Northwest Aquatic Monitoring Partnership (PNAMP) led a working group of experts from the four monitoring programs to determine data compatibility, develop a Stream Habitat Metrics Integration (SHMI) data exchange standard, and integrate compatible wadeable stream data. The resulting SHMI data exchange standard contains a data mapping file used to transform data from the source program data to a conformed format based on a controlled vocabulary. After extensive discussions assessing and comparing program collection and analyses methods, the working group found 26 stream habitat metrics to be sufficiently comparable to be integrated into a meaningful dataset. Furthermore, a subset of PIBO MP data previously available only by request and AREMP data available only as a proprietary ESRI ArcGIS geodatabase were made publicly available in non-proprietary formats via the integrated SHMI dataset. A selection of data from the four programs determined to be compatible among 14 datasets were filtered, transformed, standardized, and combined using R code to create the integrated SHMI dataset containing about 12,000 locations, 19,000 events, and 200,000 measurements from 2000 to 2022. This report describes the SHMI data exchange standard and its development, the metric compatibility assessment, and the data integration process, so that others may reuse the SHMI data exchange standard and its components as well as the data integration processes.

Techniques and Methods↗
USGS2012

Airborne digital-image data for monitoring the Colorado River corridor below Glen Canyon Dam, Arizona, 2009 - Image-mosaic production and comparison with 2002 and 2005 image mosaics

Airborne digital-image data were collected for the Arizona part of the Colorado River ecosystem below Glen Canyon Dam in 2009. These four-band image data are similar in wavelength band (blue, green, red, and near infrared) and spatial resolution (20 centimeters) to image collections of the river corridor in 2002 and 2005. These periodic image collections are used by the Grand Canyon Monitoring and Research Center (GCMRC) of the U.S. Geological Survey to monitor the effects of Glen Canyon Dam operations on the downstream ecosystem. The 2009 collection used the latest model of the Leica ADS40 airborne digital sensor (the SH52), which uses a single optic for all four bands and collects and stores band radiance in 12-bits, unlike the image sensors that GCMRC used in 2002 and 2005. This study examined the performance of the SH52 sensor, on the basis of the collected image data, and determined that the SH52 sensor provided superior data relative to the previously employed sensors (that is, an early ADS40 model and Zeiss Imaging's Digital Mapping Camera) in terms of band-image registration, dynamic range, saturation, linearity to ground reflectance, and noise level. The 2009 image data were provided as orthorectified segments of each flightline to constrain the size of the image files; each river segment was covered by 5 to 6 overlapping, linear flightlines. Most flightline images for each river segment had some surface-smear defects and some river segments had cloud shadows, but these two conditions did not generally coincide in the majority of the overlapping flightlines for a particular river segment. Therefore, the final image mosaic for the 450-kilometer (km)-long river corridor required careful selection and editing of numerous flightline segments (a total of 513 segments, each 3.2 km long) to minimize surface defects and cloud shadows. The final image mosaic has a total of only 3 km of surface defects. The final image mosaic for the western end of the corridor has areas of cloud shadow because of persistent inclement weather during data collection. This report presents visual comparisons of the 2002, 2005, and 2009 digital-image mosaics for various physical, biological, and cultural resources within the Colorado River ecosystem. All of the comparisons show the superior quality of the 2009 image data. In fact, the 2009 four-band image mosaic is perhaps the best image dataset that exists for the entire Arizona part of the Colorado River.

Arizona↗
USGS2019

A Methodology to Assess the National and Regional Impacts of U.S. Wind Energy Development on Birds and Bats

This scientific investigations report describes an effort by the U.S. Geological Survey (USGS) that used research, monitoring data, and modeling to develop a methodology to assess both the current and future population-level consequences of wind energy development on species of birds and bats that are present in the United States during any part of their life cycle. The methodology is currently applicable to birds and bats, focuses primarily on the effects of collisions with turbines, and can be applied to any species that breeds in, migrates through, or otherwise uses any part of the United States. The methodology assesses species at the national and regional scales and identifies those species potentially in need of more detailed study, as well as those species that are likely at low risk from wind energy development. This approach is fundamentally different from existing methods focusing on impacts at individual facilities. This report supersedes USGS Scientific Investigations Report 2015–5066 by the same authors, which described a preliminary version of the methodology. Following reviews of the preliminary methodology by a panel of external experts, public comments, and additional internal review, the methodology was revised and finalized. The three components of the refined methodology described in this new report rely on publicly available fatality information, population estimates, species range maps, turbine location data, biological characteristics of species, and population models. First, three metrics are combined to determine direct and indirect relative effects from wind energy facilities to generate a list of species scores. Second, a generic population model estimates the expected change in population trend caused by the additive mortality from collisions with wind turbines. Third, the methodology combines an estimate of observed fatalities and an estimate of potential biological removal to assess the possibility of a decrease in population size. The latter two components are quantitative. In a test case, the methodology was used to analyze data for six bird species and three bat species. Components of the methodology are based on simplifying assumptions and require information that, for many species, may be sparse or unreliable or may require further study. These assumptions should be carefully considered when using outputs from the methodology. Increases in the quality of data for fatalities from collisions with wind turbines, species distributions, abundance, and demography will likely improve results for uses of the methodology. The methodology’s design identifies and prioritizes a subset of the bird and bat species that may experience population-level impacts from collisions with wind turbines, both currently and from future wind energy development in the United States. Results of an assessment using this methodology could focus future research to improve our understanding of those impacts and to guide avoidance and minimization strategies. In addition, this methodology can be used to identify species for more intensive demographic modeling or to highlight those species that may not require any additional research because effects of wind energy development on their populations are projected to be small. The effects of wind energy facilities on nine unidentified species used in the test case described in this report have not been assessed. Their data were simply used to show the application of the methodology to real-world data and the types of outputs it would produce.

Scientific Investigations Report↗