Geology topics

Research about Missouri

Source-linked reports with geographic coverage including Missouri.

At least 19 recordsLinked to original sources

USGS2026

Leveraging the double uniparental inheritance of freshwater mussels to detect male spawning activity through eDNA

Sampling aquatic habitats for environmental DNA (eDNA) has emerged as a valuable population monitoring tool, particularly for species that are difficult to survey with conventional methods. However, eDNA approaches are limited in their ability to provide demographic information, resulting in most applications focusing on documenting species presence and distributions. Advancing molecular detection methods to assess reproductive phenology could significantly improve conservation outcomes by informing management efforts. In this study, we leveraged the unique double uniparental mitochondrial inheritance system of one of the most imperiled taxonomic groups, freshwater mussels, to enable detection of reproductive activity. We developed separate qPCR assays for eDNA detection of male mitotypes, found almost exclusively in male gametic tissue, and female mitotypes, found in female gametes and somatic cells of both sexes, of the endangered spectaclecase, Cumberlandia monodonta (Say, 1829). Following assay development and laboratory validation, we verified their utility in situ by detecting male and female mitotypes from captive populations in a controlled mesocosm and from natural populations in streams at sites with known and previously unconfirmed occupancy. Male mitotype eDNA was detected almost exclusively during the March–May spawning window, with concentrations often an order of magnitude higher than female mitotype concentrations. Our findings suggest targeting male mitotype DNA and strategically timing eDNA sampling during spawning periods can improve detection probabilities and aid efforts to conserve at-risk freshwater mussels.

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USGS2026

Validation of daily age in Grass Carp reared in tanks and outdoor ponds in the U.S. Midwest

Objective Accurate and precise age estimation is essential for understanding early life history, recruitment, and population dynamics in fish. However, daily otolith increment deposition has not been validated for Grass Carp Ctenopharyngodon idella in the Midwestern United States. Our objective was to validate daily increment deposition in lapilli otoliths of known-age Grass Carp that were reared under controlled laboratory and outdoor pond environments and to evaluate the reliability of otolith-based daily age estimation across early life stages. Methods Larval Grass Carp that were hatched from captive broodstock were reared in indoor tanks and outdoor ponds and sampled between 6 and 120 d posthatch. The lapilli otoliths were extracted, lightly sanded, and independently read three times to estimate age. The estimated ages were compared with known chronological age to assess the accuracy and precision of daily increment counts across rearing environments. Results Daily increment deposition was validated through 51 d posthatch for the tank-reared fish and through 69 d posthatch for the pond-reared fish. Beyond these ages, the estimated ages increasingly underestimated known age due to compression of daily increments near the otolith core and outer margin, particularly in slower growing individuals. Growth rates differed substantially between the two rearing environments and influenced increment spacing and readability. Otolith size was strongly correlated with the total length of the fish but decreased relative to chronological age as increment compression increased, particularly in fish exceeding approximately 40–50 mm total length (TL) in tank-reared and 60–70 mm TL in pond-reared individuals. Conclusions Lapilli otoliths provide reliable daily age estimates for Grass Carp during early life stages under both laboratory and pond conditions. These validated methods enable robust estimation of hatch timing and early growth, providing a foundational tool for studying early life history and informing control efforts for invasive Grass Carp populations

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USGS2026

3D Elevation Program—Missouri

Using 3D Elevation Program data, a modern illustration of each State's landscape showcases its elevation differences in vivid detail. Each State has been consistently adjusted and colorized according to its highest and lowest elevations, accentuating differences even in States with low relief. To further emphasize landforms, shaded relief has been added on top of the elevation colors.

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USGS2026

Precipitation-based flood-inundation maps for the East Fork Little Blue River and tributaries at Lee’s Summit, Missouri, 2024

The U.S. Geological Survey, in cooperation with the City of Lee’s Summit, Missouri, assessed flooding of the East Fork Little Blue River and tributaries for varying precipitation magnitudes and durations, varying antecedent runoff conditions, and projected climate-change conditions. The precipitation scenarios were used to develop a library of flood-inundation maps for a 2.95-mile reach of the East Fork Little Blue River and tributaries within the city. A two-dimensional U.S. Army Corps of Engineers Hydrologic Engineering Center–River Analysis System (HEC–RAS; ver. 6.5) rain-on-grid model was calibrated to selected runoff events representing a range of antecedent runoff conditions and hydrologic responses. Lowest adjacent grades for structures within the nearby study area were incorporated into the terrain, and depth grids and water-surface elevation grids were developed for the study area. Simulated velocities at selected bridge locations were also developed from the model. The model was calibrated using water-surface elevation data collected from water-level loggers (pressure transducers) and streamflow measurements and water-surface elevation measurements made at a reference point during runoff events. The calibrated HEC–RAS model was used to simulate streamflows from design rainfall events of 15-minute to 24-hour durations and ranging from a 100- to 0.1-percent annual exceedance probability (1-year to 1,000-year recurrence intervals). Flood-inundation maps were produced for depths at a reference location of 3 to 16 feet, or a depth exceeding the 0.1-percent annual exceedance probability interval precipitation. The results of each precipitation duration-frequency value were represented by a 1-foot-increment inundation map based on the generated peak streamflow from that rainfall event and the corresponding water-surface elevation at the East Fork Little Blue River reference location. Within the HEC–RAS model, 240 scenarios were developed from the design rainfall events with each of 3 antecedent conditions. Additional scenarios were created to simulate the effects of projected precipitation scenarios on the 100-year recurrence interval, 24-hour storm and the 100-year recurrence interval, 6-hour storm. All simulation results were assigned to a flood-inundation map condition based on the generated peak flow and corresponding water-surface elevation at the East Fork Little Blue River reference location. The flood-inundation maps are shown on a web mapping application made available to the public through the City of Lee’s Summit (hyperlink will be added when available). The flood-inundation maps are tied to real-time precipitation data obtained from the Automated Surface Observing System weather station at the Lee’s Summit Municipal Airport, accessible at https://mesonet.agron.iastate.edu/request/download.phtml?network=MO_ASOS . The availability of these maps, along with information regarding observed rainfall, could help provide emergency management personnel and residents with information that is critical for flood-response activities, such as evacuations and road closures, and for postflood recovery efforts.

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USGS2026

Tissue metal concentrations and toxicity in wild turkeys following chronic exposure to mining-contaminated soils in southeast Missouri, USA

The Big River watershed in southeast Missouri (SEMO) is a Superfund site with an extensive history of lead (Pb) and zinc (Zn) mining; cadmium (Cd) and other metals also occur in the ore and waste materials. We examined whether SEMO wild turkeys ( Meleagris gallopavo ) exposed to mining-contaminated floodplain soils and food resources in the Big River watershed had elevated metal concentrations in their tissues, indicating Pb poisoning and associated toxic effects. Compared to reference birds ( n = 15) harvested in northern Missouri, SEMO turkeys ( n = 23) had significantly elevated Pb concentrations in ventricular content, liver, kidney, bone and contour feathers. Liver and kidney from SEMO turkeys also contained significantly elevated Cd concentrations compared to reference birds. Grit (2.8–5.6 mm) from turkeys ( n = 1 reference; n = 6 SEMO) was within the size range of coarse sediments reported to contain toxic metal concentrations, and 63% of turkeys harvested within 4 km of the Big River floodplain had tissue concentrations that exceeded avian thresholds for Pb poisoning. Tissue concentrations of Pb were significant predictors of keel hemorrhage as well as reductions in testis weight and bone Zn concentration. These sublethal endpoints suggest that chronic metal exposure in SEMO turkeys may be inducing toxic effects at lower tissue metal concentrations than would be estimated by current avian toxicity thresholds. These findings highlight the need for decision makers to consider how metal contamination may affect local turkey health and abundance, and the need for data-driven guidance for the safe consumption of wild foods harvested in SEMO and other mining-affected sites.

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USGS2026

Factors affecting the spatial distribution of Niangua darters Etheostoma nianguae in streams of the Osage River basin, Missouri, USA

Aquatic ecosystems are rapidly changing, posing challenges for the conservation of threatened and endangered species, such as the Niangua darter Etheostoma nianguae , and highlighting the need to evaluate habitat use at multiple scales. The Niangua darter is a small benthic fish endemic to north-flowing streams of the Osage River basin in south-central Missouri, USA, and is federally threatened due to habitat degradation and fragmentation. Effective conservation of this species requires understanding the environmental conditions where they occur. We examined habitat use of Niangua darters at 3 nested spatial scales: macrohabitats, stream reaches, and watersheds, across 74 stream reaches in the Osage River basin. At both the macrohabitat and reach scale, Niangua darters were more likely to occur in habitats with intermediate depth (mean 41.4 and 38.5 cm, respectively) and moderate water velocities (0.20 and 0.25 m s -1 ). At the reach scale, mean summer stream temperature (mean = 23.4°C) was positively associated with Niangua darter presence, suggesting increased likelihood of occurrence in warmer streams. At the watershed scale, darters were associated with watersheds underlain by limestone and dolomite bedrock, greater soil infiltration capacity, and greater elevational relief. These characteristics likely promote stable channels with coarse substrates and minimal fine sediment deposition. These results indicate that environmental drivers differ among spatial scales but collectively reinforce the importance of physical habitat stability. As aquatic ecosystems continue to change, conservation strategies that maintain natural flow regimes and prioritize instream and riparian habitat stability and geomorphic integrity will be essential to sustaining Niangua darter populations.

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USGS2026

Recent range expansion and documentation of a reproductive population of northern snakehead Channa argus (Cantor, 1842) in the Saint Francis River Drainage, Missouri

Northern snakehead Channa argus (Cantor, 1842) is an aquatic invasive fish species in the United States with first documented occurrence in the wild in the 2000s. Management efforts to control their populations in the eastern United States are ongoing. In the Mississippi River basin, limited resources have been allocated to control its distribution, after initial detection and rapid response in Arkansas were unsuccessful. Northern snakehead distribution in the Mississippi River basin was limited to Arkansas and Mississippi until 2019 when a single northern snakehead was detected on the southern border of Missouri in the Saint Francis River drainage, the furthest northern detection. Described here are additional northern snakehead detections following public reports and subsequent monitoring in the Mingo basin of the Saint Francis River drainage, a historical braided channel and floodplain habitat of the Mississippi River with intermittently flooded bottomland hardwood forests and wetlands, and other consistent aquatic habitats. These increasing captures document the recent range expansion of northern snakehead. Most of the 11,300 ha Mingo basin consists of Mingo National Wildlife Refuge and Duck Creek Conservation Area; these areas are protected aquatic ecosystems possessing sensitive species and serve as a potential example of prioritized areas for northern snakehead control efforts. Additionally, we highlight the significance of these detections in the Mingo basin which is connected via the Castor River water-control structure to the Upper Mississippi River and may facilitate further range expansion.

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USGS2025

Flood-Inundation Maps of the Current and Jacks Fork Rivers including the Ozark National Scenic Riverways, Southeast Missouri, 2023

Digital flood-inundation maps for a 131.8-mile reach of the Current River and a 44.6-mile reach of the Jacks Fork River, in southeast Missouri, were created by the U.S. Geological Survey (USGS) in cooperation with the Ozark Foothills Regional Planning Commission and the South Central Ozark Council of Governments. The maps also encompass the 134 miles of the Current and Jacks Fork Rivers within the Ozark National Scenic Riverways, which is the first national park area to protect a river system. The flood-inundation maps, which can be accessed through the USGS Flood Inundation Mapping Program website at https://water.usgs.gov/osw/flood_inundation/ , depict estimates of the areal extent and depth of flooding corresponding to selected water levels (hereafter referred to as “stages”) at eight reference USGS streamgages—five on the Current River (USGS station numbers 07064440, 07064533, 07066510, 07067000, and 07068000) and three on the Jacks Fork River (USGS station numbers 07065200, 07065495, and 07066000). Near-real-time stages at these streamgages may be obtained from the USGS National Water Information System at https://doi.org/10.5066/F7P55KJN or the National Weather Service National Water Prediction Service at http://water.noaa.gov/ , which also forecasts flood hydrographs at four of these sites (USGS station numbers 07067000, 07068000, 07065495, and 07066000). Flood profiles were computed for seven of the eight map reaches by means of two-dimensional hydraulic models and the remaining reach by a one-dimensional hydraulic model. The models were calibrated by using stage-streamflow relations or streamflow measurements at the USGS streamgages and from high-flow stage measurements from water-level loggers distributed throughout the reaches. The hydraulic models were used to compute water-surface profiles for flood stages at 1-foot intervals referenced to the streamgage datums. The profile stages ranged from the National Weather Service “action stage” or near bankfull, to a stage exceeding the highest recorded water level at each streamgage. The simulated water-surface profiles were then combined with a digital elevation model (derived from light detection and ranging data having a nonvegetated vertical accuracy of a maximum 10-centimeter root mean square error) to delineate the area flooded at each water level and the associated water depths. The availability of these maps, along with information regarding current stage from the USGS streamgage and forecasted high-flow stages from the National Weather Service, will provide emergency management personnel, resource managers, and residents with information that is critical for flood-response activities such as evacuations and road closures, as well as for postflood recovery efforts.

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USGS2025

A flexible conservation and connectivity tool to inform stream conservation prioritization

Healthy stream networks rely on diverse fish assemblages and the mobility of fish between habitats to maintain ecosystem structure and function. Anthropogenic structures that impede fish movement (e.g., roads, dams) disrupt life cycles of migratory fishes and isolate fish populations making them more sensitive to environmental stressors. Growing interest in barrier removal is driven by the recognition that restoring fish passage improves ecosystem health and resilience at multiple trophic levels, but identifying which streams should be reconnected and which barriers to remove remains an unresolved issue. Using the state of Missouri (USA) stream network, we developed an interactive decision support tool designed to help natural resource managers identify a shortlist of stream reaches to prioritize for reconnection, barrier removal, and habitat restoration. Our aquatic connectivity decision support tool, which we call AquaConn, is aimed at managers seeking to improve connectivity within and between existing conservation areas, particularly in wadeable streams. AquaConn provides a flexible platform that allows managers to consider entire assemblages of fish or individual species across local or more regional spatial scales. While AquaConn ( https://bit.ly/4kQgXK8 ) was built for the state of Missouri, our approach and framework can be replicated in any geographical region that has adequate fish assemblage data.

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USGS2025

Genetic analysis of Missouri’s Topeka Shiners with implications for the propagation of understudied small-bodied freshwater fishes

Objective Best practices for conservation hatcheries to conserve genetic diversity and minimize adaptation to captivity have been established for decades, but how to apply them is not clear in every circumstance. As a growing number of aquatic species are propagated in captive settings, addressing the fit of these practices to each system will help managers operate optimally while conserving hatchery resources. Small-bodied freshwater fish present a unique set of traits compared with species that are typically considered for propagation (i.e., salmonids), including a patchy distribution within a watercourse. We examine the propagation and reintroduction program that supports the Topeka Shiner Miniellus topeka , an endangered minnow in the Midwestern USA. Methods We genotyped shiners from groups with different histories (two reintroduced, three captive, and two remnant populations) at 11 microsatellite loci and compared genetic diversity, genetic structure, effective population size, and evidence of population bottlenecks. We also looked at the breeding structure by genetically assigning hatchery-reared young ( n = 148) to candidate parents. Results We documented high levels of genetic structure among the two natural populations in our study. We also noted lower diversity and evidence of bottlenecks in hatchery-reared groups. However, hatcheries may support sufficient (>50) effective population sizes with minimal space. Conclusions Hatcheries may avoid bottlenecks in other small-bodied freshwater fish by collecting wild fish from a broad area and frequently incorporating them into the captive population. Within the hatchery, we emphasize the need to reduce generational overlap by stocking all production fish and/or subdividing the captive populations.

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USGS2025

Evaluating episodic sediment deposition zones in freshwater mussel habitats across Missouri, USA

Point-source sedimentation, such as spills from construction-related activities, can introduce substantial sediments into streams in the short term, potentially leading to mussel burial. To estimate downstream areas where freshwater mussels might face threats from sediment burial within the mussel habitats of Missouri streams and rivers, we examined 49 reaches where both field measurements and gaging data are available. We established empirical relationships for three flow classes to represent general flow conditions of all reaches. Using these hydraulic data, we employed a Lagrangian particle tracking model to simulate sediment transport under each condition, employing two sediment size ranges covering very fine sands to small gravels, resulting in 72 simulated scenarios. The model results indicate that sediments with diameters exceeding a critical value, ranging from 0.041 to 1.975 mm for varying velocities (ranging from 0.124 to 2.191 m/s) and depths (ranging from 1 to 12 m), settle in downstream locations. Potential settling sites span from tens to hundreds of meters downstream. The mode, median, and mean of sediment distribution generally fall within the range of 10–200 m based on particle count, while these values typically range from 1 to 100 m based on sediment mass.

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USGS2025

Bathymetric contour maps, surface area and capacity tables, and bathymetric change maps for selected water-supply lakes in Missouri, 2022–23

Bathymetric data were collected at 13 water-supply lakes around the periphery of Missouri by the U.S. Geological Survey in cooperation with the Missouri Department of Natural Resources and various local agencies, as part of a multiyear effort to establish or update the surface area and capacity tables for the surveyed lakes. Surveys were carried out during the months of April and May in 2022 and 2023. All but two of the lakes had been surveyed previously by the U.S. Geological Survey, and the recent surveys were compared to the earlier surveys to document the changes in the bathymetric surface and capacity of the lake. Bathymetric data were collected using a high-resolution multibeam mapping system mounted on a boat. Supplemental depth data at three of the lakes were collected in shallow areas with an acoustic Doppler current profiler on a remote-controlled boat. Data points from the various sources were exported at a gridded data resolution appropriate to each lake, either 0.82 foot, 1.64 feet, or 3.28 feet. Data outside the multibeam survey extent and greater than the surveyed water-surface elevation were obtained from data collected using aerial light detection and ranging (lidar) point cloud data. A linear enforcement technique was used to add points to the dataset in areas of sparse data (the upper ends of coves where the water was shallow or aquatic vegetation precluded data acquisition) based on surrounding multibeam and upland data values. The various point datasets were used to produce a three-dimensional triangulated irregular network surface of the lake-bottom elevations for each lake. A surface area and capacity table was produced from the three-dimensional surface for each lake showing surface area and capacity at specified lake water-surface elevations. Various quality-assurance tests were conducted to ensure quality data were collected with the multibeam, including beam angle checks and patch tests. Additional quality-assurance tests were conducted on the gridded bathymetric data from the survey, the bathymetric surface created from the gridded data, and the contours created from the bathymetric survey.

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USGS2024

The endangered Caney Mountain cave crayfish: A preliminary study of its habitat with brief life history notes

The stygobitic Caney Mountain cave crayfish, Orconectes stygocaneyi , is among the rarest crayfish species in North America. It is known only from Mud Cave, a small linear cave on the 3,200 ha Caney Mountain Conservation Area in Ozark County, Missouri. The species is listed as “Endangered” by the state of Missouri, and “Threatened” by the American Fisheries Society. Previous studies documented its population range and limited life history notes; but little is known about Mud Cave’s habitat. We conducted a one-year study to document the cave’s water chemistry, quality, and interior wetted pool volume, and how this habitat varies monthly, to establish a baseline for future study.

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USGS2024

Use of continuous water-quality time-series data to compute total phosphorus concentrations and loads for the Missouri River at St. Joseph and Hermann, Missouri, 2007–22

In support of Missouri’s Nutrient Loss Reduction Strategy, which was created to reduce the nutrient contamination of Missouri’s waterways from point and nonpoint sources, total phosphorus concentrations and loads were computed for the Missouri River at St. Joseph, Missouri, streamgage (U.S. Geological Survey station 06818000) and the Missouri River at Hermann, Mo., streamgage (U.S. Geological Survey station 06934500) for October 2007 to September 2022 using surrogate models and continuous turbidity sensor data. To obtain a more complete total phosphorus record for the study period, LOAD ESTimator (LOADEST) regression models using flow were used when turbidity sensor data were unavailable to estimate daily total phosphorus loads. This report presents the methods and results for the computed total phosphorus concentrations, loads, and yields for the two study sites on the Missouri River. With continued data collection and ongoing model evaluation and maintenance, the surrogate models may be useful into the future for computing total phosphorus concentrations and loads. Daily mean total phosphorus concentrations calculated using a surrogate model at the Missouri River at St. Joseph, Mo., streamgage during the 15-year study period (water years 2008 through 2022) ranged from 0.104 to 4.56 milligrams per liter (mg/L; median of 0.272 mg/L), and computed total phosphorus daily loads (with gaps in the daily record filled using the LOADEST regression model) ranged from 5.19 to 1,760 tons per day (tons/d; median of 36.5 tons/d). Annual loads ranged from 9,570 tons in water year 2022 to 50,500 tons in water year 2019. The total load for the study period was 437,000 tons. For the Missouri River at Hermann, Mo., streamgage during the same 15-year study period, daily mean total phosphorus concentrations, calculated using surrogate models applied to low and high turbidity values, ranged from 0.183 to 1.97 mg/L (median of 0.319 mg/L), and computed total phosphorus daily loads (with gaps in the daily record filled using the LOADEST regression model) ranged from 12.7 to 1,970 tons/d (median of 76.8 tons/d). Annual loads ranged from 22,600 tons in water year 2022 to 101,000 tons in water year 2019. The total load for the study period was 833,000 tons, which is nearly twice that at the Missouri River at St. Joseph, Mo., streamgage.

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USGS2024

Geomorphic change, hydrology, and hydraulics of Caulks Creek, Wildwood, Missouri

Caulks Creek is a small stream that flows through the city of Wildwood in western St. Louis County, Missouri. The U.S. Geological Survey, in cooperation with the city of Wildwood, has documented historical and recent geomorphic change along Caulks Creek, simulated the hydrologic and hydraulic response of Caulks Creek to a variety of design storm scenarios, and simulated bank retreat resulting from fluvial erosion and mass failure processes. Six study reaches were selected for monitoring geomorphic change based on known locations of erosion issues documented by the city of Wildwood. Recent short-term rates and patterns of geomorphic change in the study reaches, with a focus on bank retreat, were determined from repeat terrestrial light detection and ranging surveys and field observations of the six study reaches. Historical aerial photographs of the study reaches were analyzed to determine long-term rates of bank retreat and channel widening. In general, rapid bank retreat and widening was observed at the outer banks of meander bends and where banks are unforested. Short-term bank retreat varied substantially within individual study reaches, across the study area, and during the study period from no change to as much as 16 feet of retreat between consecutive surveys (5 to 8 months). The field surveys and visual observations indicated that bank retreat occurs episodically owing to a combination of fluvial erosion and mass failure processes, as well as freezing and thawing cycles. Long-term rates of bank retreat ranged from 0.6 to 4.4 feet per year. Hydrologic and hydraulic models of Caulks Creek were used to quantify the peak, volume, and timing of the flow response and the spatial distribution of hydraulic drivers of erosion (velocity and shear stress) along Caulks Creek for design storm scenarios that represent current (as of this publication) and projected future climate. The projected climate conditions resulted in higher peak flows compared to current conditions, including 6 to 21 percent for the year 2050 and 10 to 42 percent for the year 2099 at the downstream end of the study area. Additionally, for a given design storm, projected climate change is predicted to result in faster flows with greater shear stress, as well as more within-stream variability in velocity and shear stress. Many factors affect the velocity and shear stress at a given location, but in general, somewhat fast velocities and high shear stresses tended to occur where the channel is relatively narrow and straight. The velocity and shear stress in the study reaches (known areas of widening and bank retreat) were not particularly high, at least in part owing to the relatively large widths and high sinuosity of the present-day channel in these reaches. The potential mitigating effect of adding runoff storage to the basin also was examined for a selection of design storm scenarios. Additional runoff storage was more effective at mitigating peak flows and total runoff volumes for higher-frequency, lower-intensity storms than for lower-frequency, higher-intensity storms. The additional storage also resulted in an overall reduction in velocity (by as much as 28 percent) and shear stress (by as much as 40 percent) in the study area. However, the effect of the additional storage on peak flows, total runoff volumes, velocity, and shear stress decreased with distance downstream through the study area. For the simulated scenarios, added runoff storage was effective at mitigating the increases in peak flows, total runoff volumes, velocity, and shear stress caused by projected climate change. Lastly, the bank stability and toe erosion model (BSTEM) was used to predict bank erosion and potential bank failure surfaces at five locations along Caulks Creek for a selection of design storm scenarios. The lower-frequency, higher-magnitude design storms resulted in more bank retreat than the higher-frequency, lower-magnitude design storms, though the magnitude of the difference was site dependent. Although scenarios with additional storage were not directly simulated in BSTEM, it is likely that the additional storage would result in reduced bank retreat compared to the same design storm with existing storage, based on the hydraulic modeling results for scenarios with added runoff storage.

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USGS2024

Suspended sediment and trace element transport in the Big River downstream from the Old Lead Belt in southeastern Missouri, 2018–21

Lead Belt, an area of major lead mining from the 1860s until 1972 where more than 8.5 million tons of lead were mined. After active mining ceased, the effects of mining activities persisted in the Big River system because of large mine waste pile erosion, and floodplain sediment and streambank contamination along several tributaries and the main stem of the Big River. Lead-contaminated streambed and floodplain sediments extend more than 90 miles from the Old Lead Belt to the confluence of the Big River with the Meramec River. The waste piles and mine-waste contaminated streambed and floodplain sediments have been sources of high concentrations of several trace elements, primarily cadmium, lead, and zinc. The U.S. Environmental Protection Agency Region 7 has made several efforts to prevent further erosion of contaminated sediments into the Big River including the capping of major mine waste piles, reclaiming sediment deposits along the floodplains, and monitoring soil conditions of croplands and residential properties. A cooperative effort began in 2011 between the U.S. Geological Survey and the U.S. Environmental Protection Agency Region 7 to characterize suspended sediment quantity and quality in the Big River downstream from the Old Lead Belt as reclamation activities in the drainage basin progressed. The study was completed in two phases, and each phase included continuous stage, turbidity, and water temperature monitoring at the Big River below Bonne Terre, Missouri, streamgage and sampling station. Periodic suspended sediment samples also were collected manually (discrete samples) during base flow and selected stormflow events. Continuous streamflow, turbidity, and discrete suspended sediment data were used to develop regression models to compute daily suspended sediment concentrations and loads. During both phases, the discrete stormflow event samples were also evaluated to determine particle size distribution and concentrations of select trace elements. Phase one was completed from October 2011 through September 2013, and phase two, which is the primary focus of this report, was completed from October 2018 through September 2021. Phase two also included time-integrated suspended sediment samples collected using passive samplers. Discrete samples (collected during stormflow events) and passive samples were analyzed for concentrations of barium, cadmium, lead, and zinc in two sediment size fractions (when possible) to estimate trace element loads. Suspended sediment concentrations and loads and select trace element concentration results computed during phase one were compared to those computed during phase two to identify trends in the Big River Basin during the full study period. The concentrations of cadmium, lead, and zinc in nearly all discrete stormflow event suspended sediment samples and passive suspended sediment samples exceeded the threshold effect concentrations and the probable effect concentrations, which are two sediment quality guidelines. Most samples also exceeded the toxic effect threshold, the level at which sediment is considered to be heavily contaminated and problematic for sediment-dwelling organisms. Bulk cadmium concentrations (median of 7.90 milligrams per kilogram [mg/kg]) exceeded the toxic effect threshold (3.0 mg/kg) in 17 discrete stormflow event samples, and bulk lead concentrations (median of 1,070 mg/kg) exceeded the toxic effect threshold (170 mg/kg) in all 18 discrete stormflow event samples. Bulk zinc concentrations (median of 500 mg/kg) exceeded the toxic effect threshold (540 mg/kg) in eight discrete stormflow event samples. Bulk concentrations of these trace elements in passive suspended sediment samples were slightly greater, with concentrations of cadmium (median of 14.0 mg/kg) and lead (median of 1,860 mg/kg) exceeding the toxic effect threshold in all 18 samples. Bulk concentrations of zinc (median of 733 mg/kg) exceeded the toxic effect threshold in 15 passive samples. Compared to phase one (water years 2012–13), phase two (water years 2019–21) concentrations of lead and cadmium in the fine fraction of discrete suspended sediment samples collected at Big River below Bonne Terre were statistically similar; concentrations of barium and zinc were statistically smaller in samples collected during phase two (water years 2018–21). Sediment quality data from passive samples and daily mean suspended sediment loads from the regression model were used to calculate annual oads of barium, cadmium, lead, and zinc at the Bonne Terre streamgage. Water year 2019 had the largest loads of barium, cadmium, lead, and zinc (58.6, 1.43, 194, and 76.5 tons, respectively). The total loads of barium, cadmium, lead, and zinc for phase two (water years 2019–21) were 149, 4.00, 520, and 213 tons, respectively. Less than 5 percent of the total lead load calculated for the study period was transported when daily mean streamflow was less than 455 cubic feet per second, which is the approximate flow at which the passive samplers were inundated and began sampling. This highlights that most of the lead load is transported during stormflow events and the effectiveness of using passive samplers for ongoing monitoring of the Big River. Annual suspended sediment loads at the Bonne Terre streamgage computed using the regression model were 113,000 tons in water year 2019, 83,400 tons in water year 2020, and 96,500 tons in water year 2021. The event-based suspended sediment loads for the eight sampled stormflow events ranged from 45.3 to 32,500 tons. Although only a portion of all stormflow events during phase two were sampled, the loads accounted for during these eight stormflow events represented approximately 30.9 percent of the total suspended sediment load calculated for the study period, confirming that a large part of suspended sediments continue to be transported in the Big River during stormflow events. Event-based loads of barium, cadmium, lead, and zinc were greatest during the stormflow events sampled in January 2020 (event 4) and March 2021 (event 8). Event-based loads calculated for event 4 for barium, cadmium, lead, and zinc were 17.1, 0.206, 27.2, and 14.5 tons, respectively. During event 8, an estimated 15.6 tons of barium, 0.239 tons of cadmium, 34.0 tons of lead, and 13.6 tons of zinc were transported in suspended sediments. The continued high concentrations of lead in suspended sediments in the Big River, despite reclamation activities, is likely because of the continual transport from streambed and stream banks of lead-enriched sediment, which remain in the system from historical mining activities.

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USGS2024

Chronic effects of metal releases from historical mining on threatened crayfish in Madison County Missouri, USA

The Little St. Francis River and its tributaries drain metals-contaminated areas of the Madison County Mines National Priority List Superfund site (MCM) which was designated in 2003 to facilitate remediation of metals contamination within the MCM. One concern for natural resource trustees in the MCM is the potential effects of elevated metals concentrations on the federally threatened St. Francis River crayfish, Faxonius quadruncus , which has a geographic range that is limited to the St. Francis River watershed. A survey of riffle-dwelling crayfish, in-situ cage study, and laboratory toxicity tests were conducted to assess the effects of mining-derived metals on F. quadruncus and other crayfish species in the MCM. Crayfish densities were significantly greater at sites upstream of metals releases from historical mining (henceforth mining releases) compared to densities at sites downstream of mining releases, and metals concentrations in whole-body crayfish, surface water, sediments, macroinvertebrates, fish, and plant material were greater at sites downstream of mining releases compared to sites upstream of mining releases. Crayfish densities were also negatively correlated with consensus-based adverse effects indices, expressed as surface-water toxic units and sediment probable effects quotients. Decreased growth and increased mortality during cage and laboratory studies were likely due to exposure to, and subsequently uptake of, elevated concentrations of metals. Crayfish in all studies were found to bioaccumulate metals, which supports their utility as bioindicators of metals contamination. Study results show that elevated metals concentrations associated with mining releases in the MCM continue to adversely affect biota, including the federally threatened F. quadruncus .

Missouri↗

USGS2024

Role of edaphic, hydrologic, and land cover variables in determining dissolved organic carbon in Missouri (USA) reservoirs and streams

In Missouri, distinct geophysical gradients influence statewide patterns in water quality. Here, we quantify the spatiotemporal variability of dissolved organic carbon (DOC) in reservoirs and streams and the edaphic, hydrologic, and land cover variables that account for cross-system variation. Datasets included statewide inventories collected over decades and studies with greater temporal resolution ( n = >6350 DOC measurements). Among reservoirs, the smallest DOC concentration was measured in a spring-fed system within a forested watershed, and the largest was where agricultural biosolids were applied to the land (range 1.0–15.9 mg/L, overall mean 5.8 mg/L). Reservoir values increased from the southern forested Highlands (mean 4.7 mg/L) to the northern agricultural Plains (mean 7.0 mg/L). Stream DOC was similar to reservoir values (overall mean in streams 6.3 mg/L; Highlands mean 4.0 mg/L; Plains mean 6.6 mg/L), despite differences in study design and collection period. Reservoir DOC increased in spring, indicative of allochthonous loading, with small autochthonous additions during a broad summer peak. Temporal variability in DOC was low relative to macronutrients and chlorophyll in both reservoirs and streams, indicating DOC may be a sensitive and readily detected indicator of temporal change in these systems. In regression analyses, watershed features accounted for more than 60% of overall cross-system variability in DOC in both reservoirs and streams. Driver-response relations, however, differed between regions. This analysis extends our understanding of environmental influences on surface water chemistry in Missouri and indicates DOC is nearly as predictable as macronutrients using landscape-level features.

Missouri↗