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Research about Massachusetts

Source-linked reports with geographic coverage including Massachusetts.

At least 37 records · Page 2Linked to original sources
USGS2025

Methods for estimating selected low-flow statistics at gaged and ungaged stream sites in Massachusetts

The U.S. Geological Survey, in cooperation with the Massachusetts Department of Conservation and Recreation, Office of Water Resources, computed selected at-site streamflow statistics at U.S. Geological Survey streamgages in and near Massachusetts and developed regional regression equations for estimating selected streamflows at ungaged stream sites in Massachusetts. Two sets of regional regression equations were developed: (1) the “mainland” equations, for mainland Massachusetts excluding the area covered by the second set, and (2) the “southeastern” equations, for the Plymouth-Carver-Kingston-Duxbury aquifer area in southeastern Massachusetts and for Cape Cod. The regression equations and at-site statistics may be used by Federal, State, and local water managers in addressing water-resources issues relevant in Massachusetts. Regional regression analyses for the mainland equations were developed to estimate the following 27 streamflow statistics: 99-, 98-, 95-, 90-, 85-, 80-, 75-, 70-, 60-, and 50-percent flow durations; monthly June, July, August, and September 90- and 50-percent flow durations; February, June, and August median of the monthly means; harmonic mean; and medians of the following annual low-flow frequency statistics: 7-day; 7-day, 2-year; 7-day, 10-year; 30-day, 2-year; and 30-day, 10-year. The analyses used 81 streamgages with minimal to no regulations in and near Massachusetts. The regression analyses determined that four basin characteristics—drainage area, combined hydrologic soils A and B, streamflow variability index, and annual mean temperature—were the only significant explanatory variables for the different mainland equations. Regional regression equations were developed for the Plymouth-Carver-Kingston-Duxbury aquifer area in southeastern Massachusetts and Cape Cod, because surface-water drainage areas and groundwater contributing areas do not always coincide in this area of the State. The regression analyses to estimate 10 flow durations from the 99th to 50th percentiles used 18 streamflow sites with some occasional minor regulations—because there are few unregulated streams in southeastern Massachusetts. The analyses determined that groundwater contributing area and storage (combined water bodies and wetlands) were the only significant explanatory variables in the southeastern equations.

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USGS2025

Salting behaviors influence urban stream conductivity in Boston, Massachusetts (USA)

Freshwater salinization is a major concern in temperate climates where road salt is used as a deicer to manage snow and ice on roadways. In urban and suburban areas, wastewater, weathering of infrastructure, and salting on parking lots and sidewalks can also contribute to salt contamination, but little is known about how well these sources explain variation in stream conductivity and what factors may mitigate high conductivity in streams. We collected specific conductance samples seasonally over 1 y at 100 stream sites in the greater Boston (Massachusetts, USA) metropolitan area, which reflected a gradient of land use/cover and sociodemographic variables. We also continuously monitored specific conductance over 1 y (November 2021–December 2022) at 3 streams with different levels of impervious cover. Baseflow conductivity from grab samples was best explained by % impervious cover (positive relationship) and season (highest median conductivity in summer and early autumn) ( r 2 = 0.47, p < 0.001). At high impervious cover, watersheds with higher housing vacancy had lower conductivity, suggesting that resident salting behavior may affect conductivity. Continuous conductivity varied with discharge, with spikes in conductivity coincident with increases in discharge in the winter, likely due to the influx of road salt into waterways. In the summer, higher discharge was linked with sharp decreases in conductivity, suggesting that storm flows dilute high baseflow conductivity, although combined sewer overflows caused secondary conductivity pulses. Overall, conductivity was highest during winter storm pulses, but elevated conductivity levels persisted throughout the year, especially in more impervious watersheds. Our research suggests that reduced salt application and street sweeping may reduce conductivity but will not prevent continued salinization. Temporal patterns of conductivity highlight the importance of seasonal road-salt application (winter), seasonal climate (low-flow summers), and precipitation (storm events, droughts) in influencing stream conductivity and can guide monitoring design, policymaking, and management decisions under climate uncertainty.

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USGS2025

Simulated hydrologic responses to proposed wastewater-returnflow scenarios in Falmouth, Massachusetts

The Cape Cod aquifer is the sole source of drinking water for communities on Cape Cod, Massachusetts, including the Town of Falmouth, where the aquifer is currently threatened by contamination from septic-system-derived nitrogen. To address this problem, the Town is proposing to sewer areas of Falmouth, treat the wastewater at the Town’s Main Wastewater Treatment Facility (a nitrogen removing/tertiary treatment facility), and discharge the treated wastewater to an ocean outfall pipe in Nantucket Sound. The U.S. Geological Survey, in cooperation with the Town of Falmouth, updated a three-dimensional steady-state groundwater flow model to represent current (defined as 2019–23) average hydrologic conditions and to simulate the long-term average freshwater hydrologic response to two wastewater-return-flow scenarios. Scenario 1 involves the sewering of all properties south of Route 28 in Falmouth, which approximates the Town’s possible sewer expansion over the next 20–30 years. Scenario 2 involves sewering of all properties in Falmouth to demonstrate the maximum potential effect of sewering on the aquifer. Overall, the simulated hydrologic response of water-table altitudes and streamflow in both scenarios was relatively small compared to fluctuations from natural recharge. In scenario 1, the water-table altitude decreased by about 0.1 feet south of Route 28, where the conversion to municipal sewers removed wastewater-return flow from onsite septic systems. The water-table altitude decreased by about 0.1–0.2 feet over a larger area in Falmouth under town-wide sewering in scenario 2. The greatest decrease in water-table altitude in both scenarios occurred near the Main Wastewater Treatment Facility, with a decrease of about 1.1 feet in scenario 1 and about 1.3 feet in scenario 2. Simulated decreases in streamflow also were estimated for six selected streams in Falmouth and Mashpee. In both scenarios, the largest simulated decreases in streamflow were at the Coonamessett River, which is the closest stream to the Main Wastewater Treatment Facility. In scenario 1, the average annual decrease in flow at the Coonamessett River was 0.1 cubic feet per second, a 1.1 percent decrease from current (2019–23) conditions. In scenario 2, streamflow at the Coonamessett River decreased by 0.6 cubic feet per second, a 5.4 percent decrease from current (2019–23) conditions.

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USGS2025

Simulated biogeochemical effects of seawater restoration on diked salt marshes, Cape Cod National Seashore, Massachusetts, U.S.

Efforts have been underway worldwide to reintroduce seawater to many historically diked salt marshes for restoration of tidal flow and associated estuarine habitat. Seawater restoration to a diked Cape Cod marsh was simulated using the computer program PHREEQC based on previously conducted microcosm experiments to better understand the associated timing and sequence of multiple biogeochemical reactions and their implications to aquatic health. Model simulations show that acidic, reducing waters with high concentrations of sorbed ferrous iron (Fe[II]), aluminum (Al), sulfide (S 2− ), ammonia (NH 4 + + NH 3 ), and phosphate (PO 4 3− ) are released through desorption and sediment weathering following salination that can disrupt aquatic habitat. Models were developed for one-dimensional reactive transport of solutes in diked, flooded (DF) marsh sediments and subaerially exposed, diked, drained (DD) sediments by curve matching porewater solute concentrations and adjusting the sedimentary organic matter (SOM) degradation rates based on the timing and magnitude of Fe(II) and S 2− concentrations. Simulated salination of the DD sediments, in particular, showed a large release of Al, Fe(II), NH 4 + , and PO 4 3− ; the redox shift to reductive dissolution provided higher rates of SOM oxidation. The sediment type, iron source, and seasonal timing associated with seawater restoration can affect the chemical speciation and toxicity of constituents to aquatic habitat. The constituents of concern and their associated complex biogeochemical reactions simulated in this study are directly relevant to the increasingly common coastal marsh salination, either through tidal restoration or rising sea level.

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USGS2025

The δ13C signature of dissolved organic and inorganic carbon reveals complex carbon transformations within a salt marsh

Coastal wetlands have high rates of atmospheric CO 2 uptake, which is subsequently respired back to the atmosphere, stored as organic matter within flooded, anoxic soils, or exported to the coastal ocean. Transformation of fixed carbon occurs through a variety of subsurface aerobic and anaerobic microbial processes, and results in a large inventory of dissolved carbon. Carbon source and the roles of aerobic respiration, sulfate reduction, and methane cycling were evaluated within salt marsh peat and the underlying sandy subterranean estuary. There is a large increase in dissolved inorganic carbon (DIC, 7,350 ± 3,900 μmol L −1 ), dissolved organic carbon (DOC, 1,040 ± 1,480 μmol L −1 ) and CH 4 (14.5 ± 33.3 μmol L −1 ) within the marsh porewaters compared to creek waters. Alkalinity production (5,730 ± 2,170 μeq L −1 ) and sulfate removal (1,810 ± 1,970 μmol L −1 ) indicate anaerobic respiration, however, relative contributions from the various decomposition pathways cannot be identified due to overlapping geochemical signatures. The δ 13 C of the DOC (−29.0 ± 3.7‰) and DIC (−11.2 ± 1.1‰) produced within the marsh differed from the bulk soil organic matter δ 13 C (−14.5 ± 0.2‰). We explore a variety of mechanisms that could result in co-occurring depleted δ 13 C-DOC and enriched δ 13 C-DIC compared to the bulk soil organic carbon pool and salt marsh vegetation, including selective mineralization, production of δ 13 C-depleted bacterial biomass, and methane-derived DOC. While important questions remain about carbon cycling pathways, we found evidence of a cryptic methane cycle. Alteration of the δ 13 C of carbon species complicates source attribution in solid and dissolved phases and careful consideration should be used when carbon is partitioned between in situ salt marsh production and external marine and terrestrial sources.

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USGS2025

Spatial and temporal variation in dissolved organic matter in urban streams in metropolitan Boston, Massachusetts (USA)

Urban riverine systems are heterogeneous, and the substantial variability in impervious cover, riparian cover, wetlands, and wastewater and stormwater infrastructure affect sources and transport of dissolved organic matter (DOM), of which dissolved organic C (DOC) is a substantial component. An understanding of the quantity, bioavailability, and timing of DOM inputs (a key energy source for food webs and a component of nutrient cycling) to streams within cities can help to better evaluate drivers of DOM variability. We sampled 100 stream sites in the greater Boston (Massachusetts, USA) area spanning a range of land cover, riparian vegetation, stream size, housing and infrastructure age, and sociodemographic characteristics. Water samples collected during 4 seasonal synoptic events in 2021 and 2022 were analyzed for DOC concentration and DOM characteristics (using fluorescence excitation–emission matrices and absorbance spectra). Temporally, we observed more-autochthonous DOM and lower DOC concentrations in the summer, possibly due to low precipitation and streamflow disconnecting streams from humic wetland and soil C sources. Consistent with other studies, we observed that more-urbanized streams had DOM that was less humic and more autotrophic. Higher wetland cover was associated with more-humic, higher-molecular-weight DOM and was the strongest predictor of DOM characteristics, suggesting that managers should consider the impacts of development on DOM, stream ecological functions, and CO 2 emissions. Interestingly, except during the very dry summer, sites downstream of combined sewer outfalls showed distinctly higher concentrations of protein-like DOM, suggesting the influence of sewage overflows and highlighting the potential for monitoring wastewater contamination using protein-like DOM. Although sociodemographic variables were not strong predictors of DOM composition, we observed a possible association between lower-income areas with less canopy cover and more-autochthonous DOM and between areas with older housing, more canopy cover, and more-humic DOM. These patterns suggest that equitable repair of wastewater infrastructure and restoration of riparian vegetation is needed.

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USGS2025

Evidence of mineral alteration in a salt marsh subterranean estuary: Implications for carbon and trace element cycling

Subterranean estuaries (STE) in salt marshes are biogeochemically active zones where interactions between terrestrial groundwater and seawater drive complex cycling of carbon and trace elements, influenced by mineral dissolution. These systems, characterized by fine-grained organic-rich peat overlying permeable coastal aquifers, play a crucial role as a blue carbon sink, yet their geochemical dynamics remain poorly understood. We investigated dissolved trace elements, carbon, silica, and radium isotopes in a salt marsh STE (Sage Lot Pond, Waquoit Bay, MA) over seasonal and annual cycles. Our results reveal that groundwater and estuarine water circulation through marsh peat and aquifer sediments leads to enrichments of dissolved organic and inorganic carbon (DOC and DIC), Si, Ba, and Mn, with variable source/sink behavior of Fe and net removal of U. Submarine groundwater discharge dominated Ba fluxes, whereas pore water drainage from marsh peat acted as the main sink for U and source of Si. Fe cycling was variable, with terrestrial Fe largely removed as groundwater passed through the STE, consistent with Fe-sulfide and amorphous phase formation. Radium isotope ratios identified two distinct subsurface flow pathways, influenced by metal-oxide cycling and organic matter breakdown. Si production was decoupled from DIC, suggesting Si originates from mineral alteration, whereas DIC results from both mineral weathering and microbial respiration. Silicate mineral alteration, coupled with marsh pore water drainage, accounts for up to 16% of annual DIC exports (66 g C m −2 y −1 ), highlighting the importance of STEs in coastal carbon and trace element cycling, especially as marshes face environmental change.

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USGS2025

Field and laboratory evaluations of visible light as a cue for guiding downstream-migrating juvenile Sea Lamprey

Objective We evaluated white light as a potential guidance cue for juvenile Sea Lamprey Petromyzon marinus in a natural setting as well as the effect of water velocity (0.25-, 0.50-, 0.75-, and 1.0-m/s test velocities) on light guidance behavior in a controlled laboratory flume, and characterized emigration timing and movement rates in a small stream (∼10 m wide and 0.7 m deep). Methods Behaviors and rates of downstream movement were monitored using PIT telemetry in both studies. Results In the field study, downstream movement by juveniles released during October 30–November 27 appeared to be cued by precipitation-induced flow events when water temperatures ranged between 4°C and 8°C. Juveniles expressed lateral attraction to a short, bank-mounted linear light array, but the guidance effect was not strong or consistent between bank light locations. Downstream movement rates decreased slightly when juveniles were exposed to the light cue. In the laboratory flume experiment, at water velocities of 0.25 and 0.75 m/s, lamprey were 2.8 and 3.3 times more likely to be detected at antennas along a wall with a linear light array compared with other antennas across the width of the flume. Significant changes in distribution were detected farther upstream in the flume during 0.25- and 0.50-m/s water velocity trials compared with 0.75-m/s trials. Further, the rate of downstream movement through the length of the flume decreased under artificial lighting compared with dark controls under the 0.25- and 0.75-m/s velocity conditions. Conclusions The results suggest lamprey exhibit a behavioral response to the light cue in both lab and field, but water velocity influences how effectively juveniles can respond to light cues.

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USGS2025

Occurrence and tissue distribution of per- and polyfluoroalkyl substances (PFAS) in fishes from waterbodies with point and non-point sources in Massachusetts, USA

Per- and polyfluoroalkyl substances (PFAS) are persistent environmental contaminants with known bioaccumulative and toxic effects in aquatic ecosystems. This study assessed site-specific differences in PFAS contamination in fish from Ashumet Pond, Sudbury River, and Great Herring Pond (reference site) in Massachusetts. Fish from Ashumet Pond exhibited the highest PFAS concentrations, particularly perfluorooctane sulfonate (PFOS), which exceeded levels in plasma almost 650 times those at the reference site. Principal component analysis identified distinct PFAS profiles at each site, reflecting localized contamination sources. Temporal analysis at Ashumet Pond revealed a substantial increase in plasma PFOS and perfluorodecanoic acid (PFDA) from 2020 to 2022. Tissue distribution analyses showed the highest PFAS concentrations in plasma, followed by liver and muscle, consistent with PFAS binding affinity for blood proteins. Species-specific differences in PFAS bioaccumulation were observed, with largemouth bass ( Micropterus nigricans ) exhibiting higher body burdens than banded killifish ( Diaphanus fundulus ), likely due to trophic position and dietary exposure. Histopathological assessments and gene transcript analyses revealed associations between PFAS exposure and inflammatory responses, oxidative stress, endocrine disruption, and immune-related pathways, with the most pronounced molecular effects observed at the downstream site of the Sudbury River. This study underscores the importance of understanding site-specific contamination sources, exposure pathways, and biological effects of PFAS in fish. These findings would benefit from additional research on sediment contamination, temporal analyses at each site, trophic transfer, and transcriptomic analyses across multiple organs to further elucidate PFAS toxicity mechanisms and guide remediation efforts.

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USGS2025

Linking stream-reach nitrogen loads and groundwater “reachsheds” to inform wastewater-nitrogen management actions, Cape Cod, Massachusetts

Study Region Cape Cod, Massachusetts, U.S.A. Study Focus Anthropogenic nitrogen (N) is a key factor in degrading groundwater and surface-water quality, particularly in coastal New England where onsite wastewater systems are prevalent. This study evaluated whether direct N-load measurements in streams on Cape Cod, Massachusetts, coupled with flow-path information from groundwater-flow models, can effectively identify potential land areas where nitrogen mitigation could substantially reduce loads to receiving waters. Nitrogen fluxes were measured along 63 stream reaches during winter and summer and paired with simulated groundwater recharge areas to identify and rank potential areas for reduction of nonpoint-source N inputs. New Hydrologic Insights for the Region Reach-scale nitrate-N loads ranged from −39.1–1182 kg-N/yr per 100 m of stream, indicating spatially variable groundwater inputs across seasons. “Reachsheds” — areas contributing groundwater recharge to specific stream reaches — were delineated using a regional groundwater-flow model. Strong correlations were found between observed N loads and land-use characteristics, especially the number of septic systems and total N inputs from the sum of considered sources. Observed N loads were moderately correlated with recharge area size and wastewater flow estimates. Correlating reach-specific groundwater N loads with land use and parcel-scale nitrogen-yield data identified reachsheds with the highest potential for N load reduction. This approach enables targeted implementation of restoration efforts to optimize nutrient management and support regional load reduction.

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USGS2025

How quickly do brook trout lose long-term thermal acclimation?

Abundances of coldwater adapted stream fish populations are declining largely due to anthropogenic influences, including increased temperature. To persist in streams with unsuitable thermal habitat, fish must move to coldwater patches, acclimate, or adapt to water temperatures above thermal optima. Brook trout, a coldwater adapted salmonid, has previously displayed physiological plasticity and the ability for reversible thermal acclimation when reared at higher temperatures. However, because stream temperatures are not static, it is important to explore the rate at which thermal acclimation occurs to evaluate whether prior thermal experience will influence future thermal performance. To determine the temporal scale in loss of thermal acclimation as water temperatures cool, we acclimated brook trout to three thermal regimes: +0 °C (ambient; mimicking the daily average water temperature of a nearby long-term study site), as well as +2 °C and +4 °C above ambient. After 2 years of being reared under those conditions, fish from the warmer treatments were moved to a common, colder temperature (ambient). We then used critical thermal maximum to measure the loss in acclimation response of fish from each treatment over time. We found that regardless of initial acclimation temperature, thermal tolerance of warm acclimated fish decreased rapidly for 1 week, then gradually decreased, and was completely lost within 42 days. This gradual loss of acclimation may be valuable to persistence in warmer streams and will be important to include in models of the impact climate change has on brook trout and other aquatic ectotherms with significant thermal plasticity.

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USGS2025

Groundwater flowpath characteristics drive variability in per- and polyfluoroalkyl substances (PFAS) loading across a stream-wetland system

Groundwater-dependent ecosystems in areas with industrial land use are at risk of exposure to a PFAS chemicals. We investigated one such system with several known PFAS source areas, where high and low permeability sediments (glacial) coupled with groundwater-lake and groundwater/surface-water interactions created complex ‘source to seep’ dynamics. Using heat-tracing and chemical methods, numerous preferential groundwater discharge zones were identified and sampled across the upper Quashnet River stream-wetland system in Mashpee, MA, USA, downgradient of Joint Base Cape Cod (JBCC). Surface-water and groundwater samples were analyzed for 40 PFAS compounds between March and October 2022. Samples were collected from groundwater seeps identified as preferential discharge points (PDPs), wells upgradient of the stream-wetland system, contributing flow-through kettle lakes, and along Quashnet River surface-waters. PFAS from sampled waters contained perfluorinated carboxylates (PFPea, PFHxA, PFNA), perfluorinated sulfonates (PFBS, PFPeS, PFHxS, PFOS), fluorotelomer sulfonates (6:2, 8:2 FtS), and perfluoroalkyl sulfonamides (PFOSA). Samples from PDPs and wells had measured PFAS concentrations ranging from non-detect to 4677 ng/L ng/L (mean = 418 ng/L, std. = 709 ng/L), and a range of deuterium excess values (3.2 to 15.9 per mil) indicative of varying degrees of groundwater-lake interaction prior to groundwater flowpath emergence at PDPs. Correlations ( p < 0.01) between deuterium excess, %PFAS precursors, and terminal PFAS compounds highlighted potential precursor transformations associated with lake-groundwater exchange along flowpaths sourcing PDPs. However, some seepages had higher total PFAS concentrations (>1000 ng/L) than upgradient kettle lakes despite showing lake (evaporative) isotopic signatures, indicating the potential for groundwater flowpath convergence at wetland discharge zones and the influence of lakebed PFAS precursor reactions. Results from these synoptic surveys address gaps in the existing PFAS literature by demonstrating the importance of subsurface fate and transport on PFAS compound concentrations and mass loading in preferential groundwater discharge zones.

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USGS2025

Negative growth in body mass of trout and salmon in a small stream network

In species inhabiting stressful environments, some individuals experience negative growth in body mass during their lives, potentially influencing survival, reproduction, populations, and ecosystems. Using data from a long-term (1997–2015) study of brook trout ( Salvelinus fontinalis ), brown trout ( Salmo trutta ), and juvenile Atlantic salmon ( Salmo salar ) in Massachusetts, USA, we analyzed the frequency, causes, and consequences of seasonal mass loss. Negative growth occurred in 14.8% of observations (3573 instances), with the highest prevalence during summer (June–September). Species differed markedly: 42.5% of juvenile Atlantic salmon, 24.9% of brook trout, but only 7.7% of brown trout exhibited negative growth. The likelihood of mass loss increased with size, age, and low stream flows, particularly in summer. Brook trout in the small or isolated tributaries exhibited less summer mass loss than those in the larger streams. Other factors, including temperature and population density, had minimal or inconsistent effects. Individuals experiencing negative growth, especially brook trout in summer and autumn, were less likely to be re-encountered. As we observed no association of mass loss with movement, this suggests a potential survival cost of negative body mass growth.

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USGS2024

Seabed maps showing topography, ruggedness, backscatter intensity, sediment mobility, and the distribution of geologic substrates in quadrangle 2 of the Stellwagen Bank National Marine Sanctuary region offshore of Boston, Massachusetts

The U.S. Geological Survey, in cooperation with the National Marine Sanctuary Program of the National Oceanic and Atmospheric Administration, has conducted seabed mapping and related research in the Stellwagen Bank National Marine Sanctuary (SBNMS) region since 1993. The area being mapped using geophysical and geological data includes the SBNMS and the surrounding region, which totals approximately 3,700 square kilometers (km 2 ) and is subdivided into 18 quadrangles. The seabed is a glaciated terrain that is topographically and texturally diverse. Quadrangle 2, the subject of this scientific investigations map, has a mapped area of 209 km 2 and has water depths that range from about 19 meters (m) on the Stellwagen Bank crest to about 68 m in the Stellwagen Basin. Seven map types, each at a scale of 1:25,000, depict seabed topography, ruggedness, backscatter intensity, distribution of geologic substrates, sediment mobility, distribution of fine- and coarse-grained sand, and substrate mud content. These maps show the distribution of geologic substrates across the southwestern part of Stellwagen Bank, in Stellwagen Basin to the west and southwest of the bank, and in Little Stellwagen Basin and the western part of Race Point Channel to the south of the bank. Interpretations of multibeam sonar bathymetric and seabed backscatter imagery, photographs, video imagery, and grain-size analyses were used to create the geology-based maps. Data from 733 stations were analyzed, including 656 sediment samples. The geologic substrate maps of quadrangle 2 show the distribution of 19 geologic substrates that represent a wide range of textures, such as rippled and immobile sand, immobile muddy sand and sandy mud, sand that partially veneers gravel, and a boulder ridge. Mapped substrates are characterized by sediment grain-size composition, surface morphology, substrate layering, the mobility or immobility of substrate surfaces, and water depth range. This scientific investigations map portrays the major geological elements (substrates, topographic features, and processes) of environments in quadrangle 2. It is intended to provide a foundation for research into present and past sediment transport processes in a complex terrain, provide insights into the ecological requirements of invertebrate and vertebrate species that utilize the various substrates, and support seabed management in the region.

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USGS2024

Pragmatically mapping Phragmites with unoccupied aerial systems: A comparison of invasive species land cover classification using RGB and multispectral imagery

Unoccupied aerial systems (UASs) are increasingly being deployed in coastal environments to rapidly map and monitor changes to geomorphology, vegetation, and infrastructure, particularly in difficult to access areas. UAS data, relative to airplane or satellite data, typically have higher spatial resolution, sensor customization, and increased flexibility in temporal resolution, which benefits monitoring applications. UAS data have been used to map and monitor invasive species occurrence and expansion, such as Phragmites australis , a reed species in wetlands throughout the eastern United States. To date, the work on this species has been largely opportunistic or ad hoc. Here, we statistically and qualitatively compare results from several sensors and classification workflows to develop baseline understanding of the accuracy of different approaches used to map Phragmites . Two types of UAS imagery were collected in a Phragmites -invaded salt marsh setting—natural color red-green-blue (RGB) imagery and multispectral imagery spanning visible and near infrared wavelengths. We evaluated whether one imagery type provided significantly better classification results for mapping land cover than the other, also considering trade-offs like overall accuracy, financial costs, and effort. We tested the transferability of classification workflows that provided the highest thematic accuracy to another barrier island environment with known Phragmites stands. We showed that both UAS sensor types were effective in classifying Phragmites cover, with neither resulting in significantly better classification results than the other for Phragmites detection (overall accuracy up to 0.95, Phragmites recall up to 0.86 at the pilot study site). We also found the highest accuracy workflows were transferrable to sites in a barrier island setting, although the quality of results varied across these sites (overall accuracy up to 0.97, Phragmites recall up to 0.90 at the additional study sites).

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USGS2024

Evidence of nitrate attenuation in intertidal and subtidal groundwater in a subterranean estuary at a Cape Cod embayment, East Falmouth, Massachusetts, 2015–16

Nitrogen dynamics in intertidal and nearshore subtidal groundwater (subterranean estuary) adjacent to the Seacoast Shores peninsula, Falmouth, Massachusetts, were investigated during 2015–16 by the U.S. Geological Survey. The peninsula is a densely populated residential area with septic systems and cesspools that are substantial sources of nitrogen to groundwater. The study area is in the Eel River, an estuarine saltwater embayment connected to the ocean adjacent to the western shore of the peninsula, that was the subject of an earlier study by Colman and others (2018, https://doi.org/10.3133/sir20185095 ) on nitrogen transport and transformations in groundwater between onshore and offshore locations. The previous study documented the distribution of nitrate concentrations and nitrate attenuation reactions in fresh groundwater beneath the peninsula and the estuary. The current study extended those observations with more detailed sampling and analysis of shallow groundwater from wells near discharge sites beneath the estuary. The current field investigation included sampling of existing wells and installation and sampling of clusters of wells and temporary sampling points in the subterranean estuary, including (1) shallow transects 0.3 to 1.2 meters (m) deep extending from 1 to 13.5 m offshore and (2) deeper wells (from 1.83 to 4.88 m deep) extending from 4.3 to 14.3 m offshore. Measurements of hydraulic-head gradients 2–5 m below the sediment/water interface in the intertidal and nearshore subtidal zones indicated that groundwater flow generally was upwards (towards the estuary) under all tide conditions in October 2016. The magnitude of the gradient was greatest during low tide conditions, indicating that groundwater discharge likely decreased during high tides. Measurements of specific conductance in shallow groundwater in the subterranean estuary in three transects perpendicular to shore were consistent with the existence of saltwater flow cells (infiltration of overlying saline water, mixing with fresh groundwater, and discharge to the overlying saline water) in the intertidal and nearshore subtidal regions. The size of these flow cells was variable in space and time and dependent on the elevation of the tide (spring or neap). At this location in the Eel River subterranean estuary, and offshore to at least 13.5 m, offshore flow of fresh groundwater apparently prevented a deeper saltwater wedge from discharging to the surface. Nitrate concentrations in shallow groundwater (30 to 122 centimeters [cm] depth) were variable in space and time, ranging from not detectable to 600 micromoles per liter (μmol/L) (8.4 milligrams per liter as N), and were highest in June 2016 at depths from 61 to 122 cm below the sediment/water interface and from 4 to 9 m offshore. Nitrate generally was not detectable in saline shallow groundwater at 30-cm depth or at any depth from 30 to 122 cm from 10 to 13.5 m offshore. Dissolved oxygen concentrations were suboxic (less than 16 μmol/L) in 60 percent of the sampled subterranean groundwater beneath the intertidal and subtidal zones. In the remaining sites, the range of dissolved oxygen concentrations was from 18 to 272 μmol/L and the median concentration was 43 μmol/L. Evidence for microbial nitrate reduction (denitrification and possibly anammox) was provided by the distribution of the reaction product nitrogen gas (excess N 2 , or N 2MIC ), as determined from analysis of the dissolved nitrogen gas and argon gas (Ar) concentrations in groundwater samples. Excess nitrogen gas provided evidence for nitrate reduction in shallow groundwater below the subtidal and, to a lesser extent, intertidal zones adjacent to the Seacoast Shores peninsula. These zones, where evidence for nitrate reduction was detected, were in fresh and brackish groundwater near subtidal or intertidal saltwater cells where discharging fresh groundwater mixed with infiltrating saline water. Infiltrating seawater may have supplied organic carbon, one of several potential electron donors that are required for denitrification. Other potential electron donors, such as organic carbon, iron, manganese, hydrogen, methane, ammonium, elemental sulfur, or sulfide phases, may have been supplied by the estuarine sediments. Drainage from surface runoff near the shore also may have supplied organic carbon to fresh groundwater near the intertidal saltwater cell. The highest amounts of nitrate converted to excess nitrogen gas were estimated to be in the range of 230 to 430 μmol/L in nearly fresh groundwater near the subtidal saltwater cell at depths of 61 to 122 cm below the sediment/water interface and from 10 to 13.5 m offshore. Evidence of denitrification within 10 m of the shore was sparse (generally limited to less than 50 μmol/L of N 2 -N) despite the presence of high nitrate concentrations. The spatial distribution of estimated nitrate reduction in the intertidal and nearshore subtidal fresh and brackish groundwater may be related to local variability in the distribution of reactive electron donors in those zones. Variations in the amount of nitrate reduction to nitrogen gas were not clearly related to potential aqueous electron donors such as dissolved organic carbon, nor to potential reaction products such as alkalinity, but may have been controlled by combinations of aqueous and solid-phase reactants. The distribution of relatively shallow fresh groundwater containing nitrate could indicate potential nitrate discharge areas in the lower intertidal zone and uncertain locations farther offshore; however, the data did not extend all the way to the sediment/water interface or to the offshore freshwater limit. This study confirmed substantial loss of nitrate from some of the fresh and brackish groundwater in shallow subestuarine sediments prior to discharge but did not quantify how much nitrate eventually discharged to the estuary.

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