Geology topics

Research about Idaho

Source-linked reports with geographic coverage including Idaho.

At least 379 records · Page 21Linked to original sources

USGS2012

Water-quality characteristics and trends for selected sites at and near the Idaho National Laboratory, Idaho, 1949-2009

The U.S. Geological Survey, in cooperation with the U.S. Department of Energy, analyzed water-quality data collected from 67 aquifer wells and 7 surface-water sites at the Idaho National Laboratory (INL) from 1949 through 2009. The data analyzed included major cations, anions, nutrients, trace elements, and total organic carbon. The analyses were performed to examine water-quality trends that might inform future management decisions about the number of wells to sample at the INL and the type of constituents to monitor. Water-quality trends were determined using (1) the nonparametric Kendall's tau correlation coefficient, p -value, Theil-Sen slope estimator, and summary statistics for uncensored data; and (2) the Kaplan-Meier method for calculating summary statistics, Kendall's tau correlation coefficient, p -value, and Akritas-Theil-Sen slope estimator for robust linear regression for censored data. Statistical analyses for chloride concentrations indicate that groundwater influenced by Big Lost River seepage has decreasing chloride trends or, in some cases, has variable chloride concentration changes that correlate with above-average and below-average periods of recharge. Analyses of trends for chloride in water samples from four sites located along the Big Lost River indicate a decreasing trend or no trend for chloride, and chloride concentrations generally are much lower at these four sites than those in the aquifer. Above-average and below-average periods of recharge also affect concentration trends for sodium, sulfate, nitrate, and a few trace elements in several wells. Analyses of trends for constituents in water from several of the wells that is mostly regionally derived groundwater generally indicate increasing trends for chloride, sodium, sulfate, and nitrate concentrations. These increases are attributed to agricultural or other anthropogenic influences on the aquifer upgradient of the INL. Statistical trends of chemical constituents from several wells near the Naval Reactors Facility may be influenced by wastewater disposal at the facility or by anthropogenic influence from the Little Lost River basin. Groundwater samples from three wells downgradient of the Power Burst Facility area show increasing trends for chloride, nitrate, sodium, and sulfate concentrations. The increases could be caused by wastewater disposal in the Power Burst Facility area. Some groundwater samples in the southwestern part of the INL and southwest of the INL show concentration trends for chloride and sodium that may be influenced by wastewater disposal. Some of the groundwater samples have decreasing trends that could be attributed to the decreasing concentrations in the wastewater from the late 1970s to 2009. The young fraction of groundwater in many of the wells is more than 20 years old, so samples collected in the early 1990s are more representative of groundwater discharged in the 1960s and 1970s, when concentrations in wastewater were much higher. Groundwater sampled in 2009 would be representative of the lower concentrations of chloride and sodium in wastewater discharged in the late 1980s. Analyses of trends for sodium in several groundwater samples from the central and southern part of the eastern Snake River aquifer show increasing trends. In most cases, however, the sodium concentrations are less than background concentrations measured in the aquifer. Many of the wells are open to larger mixed sections of the aquifer, and the increasing trends may indicate that the long history of wastewater disposal in the central part of the INL is increasing sodium concentrations in the groundwater.

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USGS2012

Completion summary for borehole USGS 136 near the Advanced Test Reactor Complex, Idaho National Laboratory, Idaho

In 2011, the U.S. Geological Survey, in cooperation with the U.S. Department of Energy, cored and completed borehole USGS 136 for stratigraphic framework analyses and long-term groundwater monitoring of the eastern Snake River Plain aquifer at the Idaho National Laboratory. The borehole was initially cored to a depth of 1,048 feet (ft) below land surface (BLS) to collect core, open-borehole water samples, and geophysical data. After these data were collected, borehole USGS 136 was cemented and backfilled between 560 and 1,048 ft BLS. The final construction of borehole USGS 136 required that the borehole be reamed to allow for installation of 6-inch (in.) diameter carbon-steel casing and 5-in. diameter stainless-steel screen; the screened monitoring interval was completed between 500 and 551 ft BLS. A dedicated pump and water-level access line were placed to allow for aquifer testing, for collecting periodic water samples, and for measuring water levels. Geophysical and borehole video logs were collected after coring and after the completion of the monitor well. Geophysical logs were examined in conjunction with the borehole core to describe borehole lithology and to identify primary flow paths for groundwater, which occur in intervals of fractured and vesicular basalt. A single-well aquifer test was used to define hydraulic characteristics for borehole USGS 136 in the eastern Snake River Plain aquifer. Specific-capacity, transmissivity, and hydraulic conductivity from the aquifer test were at least 975 gallons per minute per foot, 1.4 × 10 5 feet squared per day (ft 2 /d), and 254 feet per day, respectively. The amount of measureable drawdown during the aquifer test was about 0.02 ft. The transmissivity for borehole USGS 136 was in the range of values determined from previous aquifer tests conducted in other wells near the Advanced Test Reactor Complex: 9.5 × 10 3 to 1.9 × 10 5 ft 2 /d. Water samples were analyzed for cations, anions, metals, nutrients, total organic carbon, volatile organic compounds, stable isotopes, and radionuclides. Water samples from borehole USGS 136 indicated that concentrations of tritium, sulfate, and chromium were affected by wastewater disposal practices at the Advanced Test Reactor Complex. Depth-discrete groundwater samples were collected in the open borehole USGS 136 near 965, 710, and 573 ft BLS using a thief sampler; on the basis of selected constituents, deeper groundwater samples showed no influence from wastewater disposal at the Advanced Test Reactor Complex.

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USGS2012

Numerical model simulations of nitrate concentrations in groundwater using various nitrogen input scenarios, mid-Snake region, south-central Idaho

As part of the U.S. Geological Survey’s National Water Quality Assessment (NAWQA) program nitrate transport in groundwater was modeled in the mid-Snake River region in south-central Idaho to project future concentrations of nitrate. Model simulation results indicated that nitrate concentrations would continue to increase over time, eventually exceeding the U.S. Environmental Protection Agency maximum contaminant level for drinking water of 10 milligrams per liter in some areas. A subregional groundwater model simulated the change of nitrate concentrations in groundwater over time in response to three nitrogen input scenarios: (1) nitrogen input fixed at 2008 levels; (2) nitrogen input increased from 2008 to 2028 using the same rate of increase as the average rate of increase during the previous 10 years (1998 through 2008); after 2028, nitrogen input is fixed at 2028 levels; and (3) nitrogen input related to agriculture completely halted, with only nitrogen input from precipitation remaining. Scenarios 1 and 2 project that nitrate concentrations in groundwater continue to increase from 10 to 50 years beyond the year nitrogen input is fixed, depending on the location in the model area. Projected nitrate concentrations in groundwater increase by as much as 2–4 milligrams per liter in many areas, with nitrate concentrations in some areas reaching 10 milligrams per liter. Scenario 3, although unrealistic, estimates how long (20–50 years) it would take nitrate in groundwater to return to background concentrations—the “flushing time” of the system. The amount of nitrate concentration increase cannot be explained solely by differences in nitrogen input; in fact, some areas with the highest amount of nitrogen input have the lowest increase in nitrate concentration. The geometry of the aquifer and the pattern of regional groundwater flow through the aquifer greatly influence nitrate concentrations. The aquifer thins toward discharge areas along the Snake River which forces upward convergence of good-quality regional groundwater that mixes with the nitrate-laden groundwater in the uppermost parts of the aquifer, which results in lowered nitrate concentrations. A new method of inputting nitrogen to the subregional groundwater model was used that prorates nitrogen input by the probability of detecting nitrate concentrations greater than 2 mg/L. The probability map is based on correlations with physical factors, and prorates an existing nitrogen input dataset providing an estimate of nitrogen flux to the water table that accounts for new factors such as soil properties. The effectiveness of this updated nitrogen input method was evaluated using the software UCODE_2005.

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USGS2012

Multilevel groundwater monitoring of hydraulic head and temperature in the eastern Snake River Plain aquifer, Idaho National Laboratory, Idaho, 2009–10

During 2009 and 2010, the U.S. Geological Survey’s Idaho National Laboratory Project Office, in cooperation with the U.S. Department of Energy, collected quarterly, depth-discrete measurements of fluid pressure and temperature in nine boreholes located in the eastern Snake River Plain aquifer. Each borehole was instrumented with a multilevel monitoring system consisting of a series of valved measurement ports, packer bladders, casing segments, and couplers. Multilevel monitoring at the Idaho National Laboratory has been ongoing since 2006. This report summarizes data collected from three multilevel monitoring wells installed during 2009 and 2010 and presents updates to six multilevel monitoring wells. Hydraulic heads (heads) and groundwater temperatures were monitored from 9 multilevel monitoring wells, including 120 hydraulically isolated depth intervals from 448.0 to 1,377.6 feet below land surface. Quarterly head and temperature profiles reveal unique patterns for vertical examination of the aquifer’s complex basalt and sediment stratigraphy, proximity to aquifer recharge and discharge, and groundwater flow. These features contribute to some of the localized variability even though the general profile shape remained consistent over the period of record. Major inflections in the head profiles almost always coincided with low-permeability sediment layers and occasionally thick sequences of dense basalt. However, the presence of a sediment layer or dense basalt layer was insufficient for identifying the location of a major head change within a borehole without knowing the true areal extent and relative transmissivity of the lithologic unit. Temperature profiles for boreholes completed within the Big Lost Trough indicate linear conductive trends; whereas, temperature profiles for boreholes completed within the axial volcanic high indicate mostly convective heat transfer resulting from the vertical movement of groundwater. Additionally, temperature profiles provide evidence for stratification and mixing of water types along the southern boundary of the Idaho National Laboratory. Vertical head and temperature change were quantified for each of the nine multilevel monitoring systems. The vertical head gradients were defined for the major inflections in the head profiles and were as high as 2.1 feet per foot. Low vertical head gradients indicated potential vertical connectivity and flow, and large gradient inflections indicated zones of relatively low vertical connectivity. Generally, zones that primarily are composed of fractured basalt displayed relatively small vertical head differences. Large head differences were attributed to poor vertical connectivity between fracture units because of sediment layering and/or dense basalt. Groundwater temperatures in all boreholes ranged from 10.2 to 16.3˚C. Normalized mean hydraulic head values were analyzed for all nine multilevel monitoring wells for the period of record (2007-10). The mean head values suggest a moderately positive correlation among all boreholes, which reflects regional fluctuations in water levels in response to seasonality. However, the temporal trend is slightly different when the location is considered; wells located along the southern boundary, within the axial volcanic high, show a strongly positive correlation.

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USGS2012

Evaluation of quality-control data collected by the U.S. Geological Survey for routine water-quality activities at the Idaho National Laboratory, Idaho, 1996–2001

The U.S. Geological Survey, in cooperation with the U.S. Department of Energy, collects surface water and groundwater samples at and near the Idaho National Laboratory as part of a routine, site-wide, water-quality monitoring program. Quality-control samples are collected as part of the program to ensure and document the quality of environmental data. From 1996 to 2001, quality-control samples consisting of 204 replicates and 27 blanks were collected at sampling sites. Paired measurements from replicates were used to calculate variability (as reproducibility and reliability) from sample collection and analysis of radiochemical, chemical, and organic constituents. Measurements from field and equipment blanks were used to estimate the potential contamination bias of constituents. The reproducibility of measurements of constituents was calculated from paired measurements as the normalized absolute difference (NAD) or the relative standard deviation (RSD). The NADs and RSDs, as well as paired measurements with censored or estimated concentrations for which NADs and RSDs were not calculated, were compared to specified criteria to determine if the paired measurements had acceptable reproducibility. If the percentage of paired measurements with acceptable reproducibility for a constituent was greater than or equal to 90 percent, then the reproducibility for that constituent was considered acceptable. The percentage of paired measurements with acceptable reproducibility was greater than or equal to 90 percent for all constituents except orthophosphate (89 percent), zinc (80 percent), hexavalent chromium (53 percent), and total organic carbon (TOC; 38 percent). The low reproducibility for orthophosphate and zinc was attributed to calculation of RSDs for replicates with low concentrations of these constituents. The low reproducibility for hexavalent chromium and TOC was attributed to the inability to preserve hexavalent chromium in water samples and high variability with the analytical method for TOC. The reliability of measurements of constituents was estimated from pooled RSDs that were calculated for discrete concentration ranges for each constituent. Pooled RSDs of 15 to 33 percent were calculated for low concentrations of gross-beta radioactivity, strontium-90, ammonia, nitrite, orthophosphate, nickel, selenium, zinc, tetrachloroethene, and toluene. Lower pooled RSDs of 0 to 12 percent were calculated for all other concentration ranges of these constituents, and for all other constituents, except for one concentration range for gross-beta radioactivity, chloride, and nitrate + nitrite; two concentration ranges for hexavalent chromium; and TOC. Pooled RSDs for the 50 to 60 picocuries per liter concentration range of gross-beta radioactivity (reported as cesium-137) and the 10 to 60 milligrams per liter (mg/L) concentration range of nitrate + nitrite (reported as nitrogen [N]) were 17 percent. Chloride had a pooled RSD of 14 percent for the 20 to less than 60 mg/L concentration range. High pooled RSDs of 40 and 51 percent were calculated for two concentration ranges for hexavalent chromium and of 60 percent for TOC. Measurements from (1) field blanks were used to estimate the potential bias associated with environmental samples from sample collection and analysis, (2) equipment blanks were used to estimate the potential bias from cross contamination of samples collected from wells where portable sampling equipment was used, and (3) a source-solution blank was used to verify that the deionized water source-solution was free of the constituents of interest. If more than one measurement was available, the bias was estimated using order statistics and the binomial probability distribution. The source-solution blank had a detectable concentration of hexavalent chromium of 2 micrograms per liter. If this bias was from a source other than the source solution, then about 84 percent of the 117 hexavalent chromium measurements from environmental samples could have a bias of 10 percent or more. Of the 14 field blanks that were collected, only chloride (0.2 milligrams per liter) and ammonia (0.03 milligrams per liter as nitrogen), in one blank each, had detectable concentrations. With an estimated confidencelevel of 95 percent, at least 80 percent of the 1,987 chloride concentrations measured from all environmental samples had a potential bias of less than 8 percent. The ammonia bias, which may have occurred at the analytical laboratory, could produce a potential bias of 5-100 percent in eight potentially affected ammonia measurements. Of the 11 equipment blanks that were collected, chloride was detected in 4 of these blanks, sodium in 3 blanks, and sulfate and hexavalent chromium were each detected in 1 blank. The concentration of hexavalent chromium in the equipment blank was the same concentration as in the source-solution blank collected on the same day, which indicates that the hexavalent chromium in the equipment blank is probably from a source other than the portable sampling equipment, such as the sample bottles or the source-solution water itself. The potential bias for chloride, sodium, and sulfate measurements was estimated for environmental samples that were collected using portable sampling equipment. For chloride, it was estimated with 93 percent confidence that at least 80 percent of the measurements had a bias of less than 18 percent. For sodium and sulfate, it was estimated with 91 percent confidence that at least 70 percent of the measurements had a bias of less than 12 and 5 percent, respectively.

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USGS2012

Frequency of nest use by golden eagles in southwestern Idaho

We studied nest use by Golden Eagles (Aquila chrysaetos) from 1966 to 2011 to assess nest reuse within territories, ascertain the length of time that elapses between uses of nests, and test the hypotheses that reproductive success and adult turnover influence nest switching. Golden Eagles used 454 nests in 66 territories and used individual nests 1 to 26 times during 45 continuous years of observation. Time between reuse ranged from 1 to 39 yr. Distances between nearest adjacent alternative nests within territories ranged between <1 and 1822 m, and distances between 90% of adjacent nests were <500 m. Of all nests used, 21% fell or disintegrated, and 31% were newly constructed during the study. Nest switching was not associated with the previous year's nesting success, but eagles tended to change nests after turnover of at least one member of the pair. Five of 42 nests used in 1971 and monitored continuously through 2011 were used only once and 21 were used >5 times. Two nests were unused for 21 and 27 yr after 1971 before being used every 1 to 3 yr thereafter. Eagles used 43% of the nests in series of consecutive years (range 3 to 20 consecutive nestings). Protecting unused nests for a proposed 10 yr after the last known use would not have protected 34% of all 300 nests that were reused during the study and 49% of 37 reused nests monitored consistently for 41 yr. The 102 nests that would not have received protection were in 56 of the 66 territories.

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USGS2012

Dynamics of Potamopyrgus antipodarum infestations and seasonal water temperatures in a heavily used recreational watershed in intermountain North America

Following the discovery of New Zealand mudsnails, Potamopyrgus antipodarum, in the Silver Creek watershed in Idaho, we investigated the distribution and dynamics of the snail populations over two years in field surveys. Despite extensive fishing and recreational activities in the watershed, the infestations appeared limited in extent. As with other published studies, densities of P. antipodarum were highest during summer months, but the distribution in Silver Creek was patchy. We found that near-to-below freezing winter water temperatures in localized reaches of the watershed were related to reduced populations or lack of detection. Distributions observed in winter were associated with regions of groundwater releases, or downstream of impoundments that dampened the temperature extremes observed in locations elsewhere in the watershed. We speculate that the population has remained restricted because thermal conditions are not conducive to year-round survival and growth. However, these relationships could be altered with watershed alterations or global climate change.

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USGS2012

Deer Flat National Wildlife Refuge: Lake Lowell water based recreation data summary

Introduction: Established in 1909, Deer Flat National Wildlife Refuge is one of the oldest refuges in the National Wildlife Refuge System. The Refuge has two units, Lake Lowell and the Snake River Islands. The Lake Lowell Unit is 10,636 acres and includes the almost 9,000-acre Lake Lowell and surrounding lands. The Refuge offers the six priority wildlife-dependent activities (fishing, hunting, wildlife observation, wildlife interpretation, wildlife photography and environmental education) as defined in The National Wildlife Refuge System Administration Act as amended by the Refuge System Improvement Act of 1997 as well as other non-wildlife-dependent activities. The purpose of this study is to describe use characteristics of recreational boaters on Lake Lowell. This study does not address use in other parts of the Refuge or other recreational activities. The sampling and data collection consisted of observations of boat activity made from fixed vantage points on the west and east pools of Lake Lowell to develop vessels-at-one-time (VAOT) estimates for three areas: the West Pool, the Headquarters section of the East Pool, and the East section of the East Pool. A complete description of the sampling locations and a map are provided below Traffic counters were also used to collect data on the number of vehicles entering the parking lots. Data were collected between April 15 and September 30, 2011.

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USGS2012

3-D reconstructions of subsurface Pleistocene basalt flows from paleomagnetic inclination data and 40 Ar/ 39 Ar ages in the southern part of the Idaho National Laboratory (INL), Idaho (USA)

The U. S. Geological Survey, in cooperation with the U.S. Department of Energy, is mapping the distribution of basalt flows and sedimentary interbeds at the Idaho National Laboratory in three dimensions to provide data for refining numerical models of groundwater flow and contaminant transport in the eastern Snake River Plain aquifer. Paleomagnetic inclination and polarity data from basalt samples from 47 coreholes are being used to create a three-dimensional (3-D) model of the subsurface of the southern part of the INL. Surface and sub-surface basalt flows can be identified in individual cores and traced in three dimensions on the surface and in the subsurface for distances of more than 20 km using a combination of paleomagnetic, stratigraphic, and 40 Ar/ 39 Ar data. Eastern Snake River Plain olivine tholeiite basalts have K 2 O contents of 0.2 to 1.0 weight per cent. In spite of the low-K content, high-precision 40 Ar/ 39 Ar ages were obtained by applying a protocol that employs short irradiation times (minimizing interferences from Ca derived 36 Ar), frequent measurement of various size atmospheric Ar pipettes to monitor and correct for temporal variation, and signal size dependent nonlinearity in spectrometer mass bias, resulting in age dates with resolution generally between 2 to 10% of the age. 3-D models of subsurface basalt flows are being used to: (1) Estimate eruption volumes; (2) locate the approximate vent areas and extent of sub-surface flows; and (3) Help locate high and low transmissivity zones. Results indicate that large basalt eruptions (>3 km 3 ) occurred at and near the Central Facilities Area between 637 ka and 360 ka; at and near the Radioactive Waste Management Complex before 540 ka; and north of the Naval Reactors Facility at about 580 ka. Since about 360 ka, large basalt flows have erupted along the Arco-Big Southern Butte Volcanic Rift Zone and the Axial Volcanic Zone, and flowed northerly towards the Central Facilities Area. Basalt eruptions shifted the course of the Big Lost River from a more southerly course to its present one.

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USGS2012

Differences in survival and growth in hatchery and stream environments, and in maturation of residuls in a stream, between progeny of hatchery and wild steelhead (Study sites: Brushy Fork Creek and Dworshak Hatchery; Stocks:Dworshak hatchery and Fish Creek wild; Year classes: 1992 and 1993)

Freshwater survival in hatchery and natural rearing environments was compared between progeny of hatchery (H) and wild (W) steelhead Oncorhynchus mykiss from the Clearwater River drainage in Idaho. Adults from Dworshak National Fish Hatchery and wild adults from Fish Creek fish were artificially spawned, and their progeny were genetically marked at the PEPA allozyme locus and released together as unfed fry in production facilities at the hatchery and in Brushy Fork Creek, also in the Clearwater River drainage, in a common garden design. Survival was higher for H than for W progeny at the hatchery but lower for H than for W progeny in Brushy Fork, indicating reduced fitness of the hatchery population for natural rearing and suggesting domestication as the cause. Survival at the hatchery was lower than is typical due to disease outbreaks. Survival of the first year-class of experimental fish to smolt release was only 18%. Survival of H fish was 3.8 times that of W fish under these poor survival conditions. All fish from the second year-class died halfway through the scheduled 10 month rearing period. Survival of H fish was 5.2 times that of W fish to when 1% of the initial fry were still alive indicating that W fish succumbed to the epizootic sooner than did H fish. Emigrants from the Brushy Fork study reach were sampled for three years and fish residing in the study reach were sampled for six years following fry release. Most emigrants were one or two years old and too small to be smolts (mean fork length at age-2 = 93 mm). Survival in Brushy Fork was lower for H than for W fish of the first year-class. Survival of the second year-class was higher for H than for W fish during the first two months in the stream but was lower for H than for W fish thereafter, and net survival from release to ages 3 and older was also lower for H than for W fish if our emigrant samples were representative (periods of inoperative emigrant traps prevented certainty about this). Differences between progeny groups were also found for growth (H>W) and condition (H>W) in the hatchery and downstream migration success of hatchery-reared fish after release (H>W), and for growth (H<W for one year-class; H>W for the other), condition (H>W), downstream dispersal (H>W for one year-class; H=W for the other), and maturation of residuals (ovaries weight was greater for H than for W females at ages 4 and 5; testes weight was less for H than for W age-3 males of one year-class) in Brushy Fork. A thunderstorm-induced power outage interrupted flow to the incubation trays at the hatchery and compromised a major tenet of the common garden design for the second year-class, possibly contributing to the inconsistency in relative survivals in Brushy Fork between year-classes. The storm caused the incubation environment to differ between the stocks as a result of reduced oxygen levels and substantially higher densities for H alevins. This difference was illustrated by a 55% loss for H fish during the event, about twice that for W fish.

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USGS2012

Effect of size of unfed fry at release on survival and growth of juvenile steelhead in streams and a hatchery (Study sites: Dworshak Hatchery, Silver Creek, and Twenty-Mile Creek; Stock: Dworshak hatchery; Year classes: 1996 and 1999)

We tested whether differences in size of unfed fry at release affected survival and growth of juvenile steelhead Oncorhynchus mykiss in hatchery ponds and streams. Differences in fry size were produced by selecting and spawning females that differed in the mean size of their eggs. Experiments were initiated in 1996 and 1999 with hatchery steelhead returning to the Clearwater River, Idaho. Fry size groups were small (mean fork length=26.7 mm, mean weight=0.149 g) and large (28.1 mm, 0.197 g) in 1996 and small (27.5 mm, 0.159 g), medium (28.2 mm, 0.190 g), and large (28.9 mm, 0.201 g) in 1999. Survival in the hatchery to near the end of the standard one year rearing period and in streams to late summer, three months after release, was higher for the large than for the small group in 1996 but was similar among groups in 1999. Survival in streams to age - 1 appeared to show the same pattern (large>small in 1996; no difference in 1999), but differences among fry size groups in emigration as well as mortality may have been involved. The inconsistency between years may have resulted because some 1996 female parents of the small group had exceptionally small eggs and were a year younger than the other 1996 females and all 1999 females. Growth in the hatchery was similar among groups in both years whereas growth in streams was faster for the large than for the small group in both years and intermediate for the medium group in 1999. Growth in streams appeared to be limited by food availability. Initially large fry probably out - competed smaller fry for limited food; however, we found no evidence that dispersal from release sites or emigration from streams was caused by competitive displacement of small by larger fish.

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USGS2012

Genetic differences between hatchery and wild steelhead for survival, growth, dispersal, and male maturation in a natural stream (Study site: Twenty-Mile Creek; Stocks: Dworshak hatchery and Selway River wild; Year classes: 1994 and 1995)

This study was initiated in the early 1990s to provide managers with data comparing genetic fitness for natural rearing, as measured by survival of juveniles in freshwater, between steelhead Oncorhynchus mykiss from Dworshak National Fish Hatchery and wild steelhead from the Clearwater River, Idaho. We artificially spawned hatchery steelhead and wild steelhead from the Selway River, a Clearwater River tributary, released the resulting genetically marked (at the PEPA allozyme locus) progeny (HxH, HxW from hatchery females and wild males, and WxW) as unfed fry in a second order tributary of the South Fork Clearwater River, and monitored fish residing in the stream or emigrating from it for five years. Barrier falls prevented access to the stream by naturally produced steelhead. Over 90% of the emigrants were one or two years of age and too small to be smolts (mean fork length at age-2 = 103 mm). Per fry released, the HxH cross produced 0.64-0.83 times as many emigrants as the WxW cross (P<0.05). The HxH cross produced 0.63 times as many age-4 residuals as the WxW cross for one year-class (P=0.051) and 0.68 times as many for the other (ns). Survival from age-1 to age-4 was lower for HxH than for WxW residuals of one year-class (P<0.05) and survival from age-2 to age-4 may have been lower for HxH than for WxW residuals of the other (P=0.062). Collectively, these results indicate lower survival for HxH than for WxW fish. Size was often greater for HxH than for WxW fish indicating faster growth for the former, and condition factor was also usually greater for HxH than for WxW fish. Dispersal of fry from release sites and emigration of one- and two-year olds from the study stream were greater for WxW than for HxH fish, and apparently neither was from competitive displacement of small by larger fish. Incidence of flowing milt was higher for HxH than for WxW fish at age-2. Peak incidence of flowing milt for older residuals was similar among crosses (about 50%), but the peak occurred at greater size and age for WxW than for HxH residuals. HxW fish were intermediate between HxH and WxW fish, not similar to HxH fish, in survival, growth, condition, dispersal, and maturation, so differences among crosses likely resulted from additive genetic differences between the hatchery and wild populations rather than from maternal differences between hatchery and wild females. During our study, local managers decided against supplementing most wild steelhead populations in the Clearwater basin. Our study indicates that supplementing with Dworshak Hatchery fish is likely to reduce the fitness of wild populations through interbreeding and therefore supports that decision.

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USGS2012

Genetic differences between hatchery and wild steelhead for growth and survival in the hatchery and seaward migration after release (Study sites: Dworshak Hatchery and Clearwater Hatchery; Stocks: Dworshak hatchery and Selway River wild; Year classes: 1994 and 1995)

Various studies suggest that sea ranching of anadromous salmonids can result in domestication (increased fitness in the hatchery program) and a loss of fitness for natural production; however, the mechanism has not been characterized adequately. We artificially spawned hatchery and wild steelhead Oncorhynchus mykiss from the Clearwater River, Idaho, reared the resulting genetically marked (at the PEPA allozyme locus) progeny (HxH, HxW from hatchery females and wild males, and WxW) in hatcheries, and tested for differences in survival, growth, early maturation, downstream migration, and adult returns. Rearing treatments were mixed (crosses reared together) and separate (crosses reared separately from each other) at the hatchery of origin for the hatchery population where smolts are produced in one year, and at a nearby hatchery employing lower rations, lower winter temperatures, and two years of rearing to more closely mimic the natural life history (natural smolt age = 2-4 years). The hatchery population had been artificially propagated for six generations at the onset of our study. We found little or no difference in survival in the hatchery but substantially higher rates of growth and subsequent downstream migration for HxH than for WxW fish. Faster growth for HxH fish resulted in greater size at release which contributed to their higher migration rate, but other as yet uncharacterized traits also affected migration since the migration difference between crosses was apparent even within size classes. Growth of WxW fish was slower in the mixed than in the separate treatment indicating that WxW fish were competitively inferior to HxH fish in the hatchery environment. Incidence of precocious males was higher for WxW than for HxH fish in the separate but not in the mixed treatment. Incidence of HxH precocious males was similar between treatments. Apparently, the presence of HxH fish suppressed high incidence of early maturation by WxW males. A direct effect beyond the suppression of WxW growth by HxH fish was involved because the effect persisted within size categories. In-hatchery survival and growth of WxW relative to HxH fish may have been better with two-year rearing than in the standard one-year program (differences were consistent but small and non-significant); however, performance remained substantially worse for progeny of wild fish. Greater downstream migration for HxH than for WxW fish was primarily due to greater residualization for WxW than for HxH fish near the smolt release site rather than to immediate differential mortality. By August the residuals had lost condition compared to their condition in the hatchery the previous March, a month before release, and the residuals produced almost no smolts the following spring. Adult return rate was higher for HxH than for WxW fish for one year-class, consistent with the difference in downstream migration; only three adults (all WxW) returned from the other. Intermediate performance by HxW fish on growth, early maturation, downstream migration, and adult returns corroborated the genetic basis of the stock differences. Natural selection after release from the hatchery favored fish that performed well in the hatchery (grew fast, didn’t mature early, and excelled in other as yet uncharacterized traits) and genetically changed (domesticated) the wild population to resemble the hatchery population.

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USGS2012

Post-wildfire wind erosion in and around the Idaho National Laboratory Site

Wind erosion following large wildfires on and around the INL Site is a recurrent threat to human health and safety, DOE operations and trafficability, and ecological and hydrological condition of the INL Site and down-wind landscapes. Causes and consequences of wind erosion are mainly known from warm deserts (e.g., Southwest U.S.), dunefields, and croplands, and some but not all findings are transferable to the cold desert environments such as where the INL Site lies.

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USGS2011

The Edwardsburg Formation and related rocks, Windermere Supergroup, central Idaho, USA

In central Idaho, Neoproterozoic stratified rocks are engulfed by the Late Cretaceous Idaho batholith and by Eocene volcanic and plutonic rocks of the Challis event. Studied sections in the Gospel Peaks and Big Creek areas of west-central Idaho are in roof pendants of the Idaho batholith. A drill core section studied from near Challis, east-central Idaho, lies beneath the Challis Volcanic Group and is not exposed at the surface. Metamorphic and deformational overprinting, as well as widespread dismembering by the younger igneous rocks, conceals many primary details. Despite this, these rocks provide important links for regional correlations and have produced critical geochronological data for two Neoproterozoic glacial periods in the North American Cordillera. At the base of the section, the more than 700-m-thick Edwardsburg Formation (Fm.) contains interlayered diamictite and volcanic rocks. There are two diamictite-bearing members in the Edwardsburg Fm. that are closely related in time. Each of the diamictites is associated with intermediate composition tuff or flow rocks and the diamictites are separated by mafic volcanic rocks. SHRIMP U–Pb dating indicates that the lower diamictite is about 685±7 Ma, whereas the upper diamictite is 684±4 Ma. The diamictite units are part of a cycle of rocks from coarse clastic, to fine clastic, to carbonate rocks that, by correlation to better preserved sections, are thought to record an older Cryogenian glacial to interglacial period in the northern US Cordillera. The more than 75-m-thick diamictite of Daugherty Gulch is dated at 664±6 Ma. This unit is preserved only in drill core and the palaeoenvironmental interpretation and local stratigraphic relations are non-unique. Thus, the date for this diamictite may provide a date for a newly recognized glaciogenic horizon or may be a minimum age for the diamictite in the Edwardsburg Fm. The c. 1000-m-thick Moores Lake Fm. is an amphibolite facies diamictite in which glacial features have not been observed. However, it is part of a sedimentary cycle from unsorted siliclastic deposits to mud and carbonate deposits. Using lithostratigraphy and available geochronology, the Moores Lake Fm. is correlated with a younger succession of Cryogenian glaciogenic rocks in southeastern Idaho. Traditional correlations of Neoproterozoic rocks in the Cordillera recognize two levels of Cryogenian diamictites. The Edwardsburg and Moores Lake diamictites along the middle Cordillera fit well into the scenario of two glacial events. Because of the correlations, dates that provide ages for the diamictites in central Idaho (and corroborated in southeastern Idaho, Link & Fanning 2008) could constrain the age of correlated glaciogenic deposits elsewhere in the Cordillera. However, in the absence of dates for the glaciogenic diamictites in Canadian and southern US Cordilleran sections, the correlations are considered possible but uncertain.

Idaho↗

USGS2011

Lead exposure and poisoning of songbirds using the Coeur d'Alene River Basin, Idaho, USA

Previous studies have found widespread Pb poisoning of waterfowl in the Coeur d'Alene River Basin in northern Idaho, USA, which has been contaminated by mining and smelting activities. We studied the exposure of ground-feeding songbirds to Pb, sampling 204 American robins ( Turdus migratorius ), song sparrows ( Melospiza melodia ), and Swainson's thrushes ( Catharus ustulatus ) throughout the basin. These songbirds had mean blood Pb concentrations (mg/kg, dry weight) of less than 0.19 at a reference area (25 mg Pb/kg soil), 1.09 at moderately contaminated sites (170 to 1300 mg Pb/kg soil), and 2.06 at highly contaminated sites (2000 to 5000 mg Pb/kg soil). Based on guidelines for evaluating blood Pb in birds, 6% of robins from the highly contaminated sites had background concentrations, 24% were subclinically poisoned, 52% were clinically poisoned, and 18% were severely clinically poisoned with Pb. Blood Pb concentrations were lower in song sparrows than in robins and lowest in Swainson's thrushes. More than half of the robins and song sparrows from all contaminated sites and more than half of the Swainson's thrushes from highly contaminated sites showed at least 50% inhibition of the activity of the enzyme δ-aminolevulinic acid dehydratase (ALAD), commonly used as a measure of exposure to Pb. The highest hepatic Pb concentration of 61 mg/kg (dry weight) was detected in a song sparrow. Using Al as a marker for soil in songbird ingesta, we estimated average soil ingestion rates as 20% in robins, 17% in song sparrows, and 0.7% in Swainson's thrushes. Soil Pb in ingesta accounted for almost all of the songbirds' exposure to Pb. Based on these results, it is recommended that ecological risk assessments of ground-feeding songbirds at contaminated sites include soil ingestion as a pathway of exposure to Pb.

Idaho↗

USGS2011

Structural controls and evolution of gold-, silver-, and REE-bearing copper-cobalt ore deposits, Blackbird district, east-central Idaho: Epigenetic origins

The Cu-Co ± Au (± Ag ± Ni ± REE) ore deposits of the Blackbird district, east-central Idaho, have previously been classified as Besshi-type VMS, sedex, and IOCG deposits within an intact stratigraphic section. New studies indicate that, across the district, mineralization was introduced into the country rocks as a series of structurally controlled vein and alteration systems. Quartz-rich and biotite-rich veins (and alteration zones) and minor albite and siderite veinlets maintain consistent order and sulfide mineral associations across the district. Both early and late quartz veins contain chalcopyrite and pyrite, whereas intermediate-stage tourmaline-biotite veins host the cobaltite. Barren early and late albite and late carbonate (generally siderite) form veins or are included in the quartz veins. REE minerals, principally monazite, allanite, and xenotime, are associated with both tourmaline-biotite and late quartz veins. The veins are in mineralized intervals along axial planar cleavage, intrafolial foliation, and shears. Mineralized intervals are hosted by a variety of metasedimentary rocks, including three phyllitic units of Mesoproterozoic age and two schistose units. All of these units are S-tectonites in the footwall of a regional thrust fault. Specifically, the district lies within an oblique thrust ramp containing a series of structural horses (three domains) in a duplex system. The deposits span the three domains and are hosted by metamorphic rocks that range from lower amphibolite facies in the structurally upper domain to lower-middle greenschist facies in the lower domain (an inverted metamorphic sequence). Early quartz and biotite veins were introduced during progressive folding and prolonged peak metamorphic conditions and they underwent late-tectonic retrograde recrystallization and metamorphic mineral growth, to the same extent as the country rocks in each domain. Where little subsequent deformation occurred, early veins are discordant to bedding but, where folding was polyphase and fabrics are penetrative, mineralized zones are concordant with metamorphic compositional layering. Late quartz veins in the zones are associated with retrograde minerals and textures and are only locally deformed. 40 Ar/ 39 Ar dating of unoriented muscovite from the selvage of a late quartz vein yields a Late Cretaceous age of about 83 Ma, the time of retrograde metamorphism associated with introduction of late quartz veins. Textural data at all scales indicate that the host sites for veins and the tectonic evolution of both host rocks and mineral deposits were kinematically linked to Late Cretaceous regional thrust faulting. Heat, fluids, and conduits for generation and circulation of fluids were part of the regional crustal thickening. The faulting also juxtaposed metaevaporite layers in the Mesoproterozoic Yellowjacket Formation over Blackbird district host rocks. We conclude that this facilitated chemical exchange between juxtaposed units resulting in leaching of critical elements (Cl, K, B, Na) from metaevaporites to produce brines, scavenging of metals (Co, Cu, etc) from rocks in the region, and, finally, concentrating metals in the lower-plate ramp structures. Although the ultimate source of the metals remains undetermined, the present Cu-Co ± Au (± Ag ± Ni ± REE) Blackbird ore deposits formed during Late Cretaceous compressional deformation .

Idaho↗

USGS2011

Native and exotic plants of fragments of sagebrush steppe produced by geomorphic processes versus land use

Habitat fragmentation and invasion by exotic species are regarded as major threats to the biodiversity of many ecosystems. We surveyed the plant communities of two types of remnant sagebrush-steppe fragments from nearby areas on the Snake River Plain of southeastern Idaho, USA. One type resulted from land use (conversion to dryland agriculture; hereafter AG Islands) and the other from geomorphic processes (Holocene volcanism; hereafter kipukas). We assessed two predictions for the variation in native plant species richness of these fragments, using structural equation models (SEM). First, we predicted that the species richness of native plants would follow the MacArthur–Wilson (M–W) hypothesis of island biogeography, as often is expected for the communities of habitat fragments. Second, we predicted a negative relationship between native and exotic plants, as would be expected if exotic plants are decreasing the diversity of native plants. Finally, we assessed whether exotic species were more strongly associated with the fragments embedded in the agricultural landscape, as would be expected if agriculture had facilitated the introduction and naturalization of non-native species, and whether the communities of the two types of fragments were distinct. Species richness of native plants was not strongly correlated with M–W characteristics for either the AG Islands or the **kipukas. The AG Islands had more species and higher cover of exotics than the kipukas, and exotic plants were good predictors of native plant species richness. Our results support the hypothesis that proximity to agriculture can increase the diversity and abundance of exotic plants in native habitat. In combination with other information, the results also suggest that agriculture and exotic species have caused loss of native diversity and reorganization of the sagebrush-steppe plant community.

Idaho↗