Geology topics

Paul L. Flint

Publications and source records attributed to Paul L. Flint.

At least 73 records · Page 4Linked to original sources

USGS2010

Satellite‐tracking of Northern Pintail Anas acuta during outbreaks of the H5N1 virus in Japan: Implications for virus spread

We fitted Northern Pintail Anas acuta in Japan with satellite transmitters and monitored their spring migration movements relative to locations where the highly pathogenic H5N1 avian influenza virus was detected in Whooper Swans Cygnus cygnus in 2008. Pintails were assumed not to be infected with the H5N1 virus at the time they were marked because capture occurred between 2 and 5 months before reported outbreaks of the virus in Japan. We assessed spatial and temporal overlap between marked birds and occurrence of the virus and tracked Pintails after they departed outbreak locations. Eight of 66 (12.1%) Northern Pintails marked with satellite transmitters used wetlands in Japan where the H5N1 virus was detected in Whooper Swans. Apparent survival did not differ between Pintails that used H5N1 sites and those that did not. However, the proportion of Pintails that migrated from Japan was significantly lower among birds that used H5N1 sites compared with those that did not (0.50 vs. 0.79). Northern Pintails were present at the H5N1 sites from 1 to 88 days, with five birds present at the sites from 0 to 7 days prior to detection of the virus in Swans. The six Pintails observed to depart H5N1 sites did so within 2–77 days of the reported outbreaks and moved between 6 and 1200 km within 4 days of departure. Four Pintails migrated to eastern Russia. After their departure from outbreak sites, Northern Pintails made long‐distance migrations within the period when newly infected ducks would shed the H5N1 virus. This supports a hypothesized mechanism by which a highly pathogenic avian influenza virus could be spread by migratory birds.

Ibis↗

USGS2010

Intercontinental reassortment and genomic variation of low pathogenic avian influenza viruses isolated from northern pintails ( Anas acuta ) in Alaska: examining the evidence through space and time

Migration and population genetic data for northern pintails ( Anas acuta ) and phylogenetic analysis of low pathogenic avian influenza (LPAI) viruses from this host in Alaska suggest that northern pintails are involved in ongoing intercontinental transmission of avian influenza. Here, we further refine this conclusion through phylogenetic analyses which demonstrate that detection of foreign lineage gene segments is spatially dependent and consistent through time. Our results show detection of foreign lineage gene segments to be most likely at sample locations on the Alaska Peninsula and least likely along the Southern Alaska Coast. Asian lineages detected at four gene segments persisted across years, suggesting maintenance in avian hosts that migrate to Alaska each year from Asia or in hosts that remain in Alaska throughout the year. Alternatively, live viruses may persist in the environment and re-infect birds in subsequent seasons.

Alaska↗

USGS2010

Estimating carcass persistence and scavenging bias in a human‐influenced landscape in western Alaska

We examined variation in persistence rates of waterfowl carcasses placed along a series of transects in tundra habitats in western Alaska. This study was designed to assess the effects of existing tower structures and was replicated with separate trials in winter, summer and fall as both the resident avian population and the suite of potential scavengers varied seasonally. Carcass persistence rates were uniformly low, with <50% of carcasses persisting for more than a day on average. Persistence rate varied by carcass age, carcass size, among transects and was lowest in the fall and highest in the summer. We found little support for models where persistence varied in relation to the presence of tower structures. We interpret this as evidence that scavengers were not habituated to searching for carcasses near these structures. Our data demonstrate that only a small fraction of bird carcasses are likely to persist between searches, and if not appropriately accounted for, scavenging bias could significantly influence bird mortality estimates. The variation that we documented suggests that persistence rates should not be extrapolated among tower locations or across time periods as the variation in carcass persistence will result in biased estimates of total bird strike mortality.

Alaska↗

USGS2010

Reproductive ecology and habitat use of pacific Black Scoters (Melanitta nigra americana) nesting on the Yukon-Kuskokwim Delta, Alaska

Abundance indices of Black Scoters (Melanitta nigra. americana) breeding in Alaska indicate a long-term population decline without obvious cause (s). However, few life history data are available for the species in North America. In 2001–2004, information was collected on nesting habitat and reproductive parameters (i.e. components of productivity) from a population of Black Scoters nesting on the Yukon-Kuskokwim Delta, Alaska. A total of 157 nests were found over four years. Primarily, nests were among dense vegetation in shrub edge habitat, predominantly dwarf birch (Betula glandulosa) and Alaska spiraea (Spiraea beauverdiana), an average of 58 m from water. Females initiated nests from 11 June and 17 July across years. Clutch size averaged 7.5 eggs and did not vary annually. Nest success was highly variable among years and ranged from 0.01 to 0.37. Duckling survival to 30 days old varied among years, and ranged from 0.09 – 0.35. Nest success was poor in three of four years, likely due to predation by Red Fox (Vulpes vulpes). Black Scoters appear to have low but variable productivity, consistent with life-history patterns of other sea duck species. Information gained will direct future demographic research on Black Scoters, and highlights knowledge gaps impeding management strategies needed for population recovery.

Alaska↗

USGS2010

Temporal and spatial shifts in habitat use by Black Brant immediately following flightless molt

Each year thousands of Pacific Black Brant ( Branta bernicla nigricans ) undergo flightless wing molt in the Teshekpuk Lake Special Area (TLSA), Alaska, in two distinct habitats: inland, freshwater lakes and coastal, brackish wetlands. Brant lose body mass during wing molt and likely must add reserves upon regaining flight to help fuel their 2,500 km migration to autumn staging areas. We characterized movements and habitat use by Brant during post-molt (the period immediately following the recovery of flight) by (1) marking individual Brant with GPS (global positioning system) transmitters, and (2) conducting a series of replicate aerial surveys. Individuals molting in inland habitats promptly abandoned their molt wetland during the post-molt and moved into coastal habitats. Consequently, inland habitats were nearly deserted by early August when Brant had regained flight, a decrease of >5,000 individuals from the flightless period of early July. Conversely, coastal molting Brant largely remained in coastal habitats during the post-molt and many coastal wetlands were occupied by large flocks (>1,000 birds). Our results indicate that inland, freshwater wetlands were less suitable post-molt habitats for Brant, while coastal wetlands were preferred as they transitioned from flightless molt. The immediacy with which Brant vacated inland habitats upon regaining flight suggests that food may be limiting during molt and they are not selecting inland molt sites strictly for food resources, but rather a balance of factors including predator avoidance and acquisition of protein for feather growth. Our data clearly demonstrate that patterns of habitat use by Brant in the TLSA change over the course of the molt season, an important consideration for management of future resource development activities in this area.

Alaska↗

USGS2009

Avian influenza at both ends of a migratory flyway: characterizing viral genomic diversity to optimize surveillance plans for North America

Although continental populations of avian influenza viruses are genetically distinct, transcontinental reassortment in low pathogenic avian influenza (LPAI) viruses has been detected in migratory birds. Thus, genomic analyses of LPAI viruses could serve as an approach to prioritize species and regions targeted by North American surveillance activities for foreign origin highly pathogenic avian influenza (HPAI). To assess the applicability of this approach, we conducted a phylogenetic and population genetic analysis of 68 viral genomes isolated from the northern pintail (Anas acuta) at opposite ends of the Pacific migratory flyway in North America. We found limited evidence for Asian LPAI lineages on wintering areas used by northern pintails in California in contrast to a higher frequency on breeding locales of Alaska. Our results indicate that the number of Asian LPAI lineages observed in Alaskan northern pintails, and the nucleotide composition of LPAI lineages, is not maintained through fall migration. Accordingly, our data indicate that surveillance of Pacific Flyway northern pintails to detect foreign avian influenza viruses would be most effective in Alaska. North American surveillance plans could be optimized through an analysis of LPAI genomics from species that demonstrate evolutionary linkages with European or Asian lineages and in regions that have overlapping migratory flyways with areas of HPAI outbreaks.

Alaska, California↗

USGS2009

Population dynamics of long-tailed ducks breeding on the Yukon-Kuskokwim Delta, Alaska

Population estimates for long-tailed ducks in North America have declined by nearly 50% over the past 30 years. Life history and population dynamics of this species are difficult to ascertain, because the birds nest at low densities across a broad range of habitat types. Between 1991 and 2004, we collected information on productivity and survival of long-tailed ducks at three locations on the Yukon-Kuskokwim Delta. Clutch size averaged 7.1 eggs, and nesting success averaged 30%. Duckling survival to 30 days old averaged 10% but was highly variable among years, ranging from 0% to 25%. Apparent annual survival of adult females based on mark-recapture of nesting females was estimated at 74%. We combined these estimates of survival and productivity into a matrix-based population model, which predicted an annual population decline of 19%. Elasticities indicated that population growth rate (λ) was most sensitive to changes in adult female survival. Further, the relatively high sensitivity of λ to duckling survival suggests that low duckling survival may be a bottleneck to productivity in some years. These data represent the first attempt to synthesize a population model for this species. Although our analyses were hampered by the small sample sizes inherent in studying a dispersed nesting species, our model provides a basis for management actions and can be enhanced as additional data become available.

Alaska↗

USGS2009

Relationships between hepatic trace element concentrations, reproductive status, and body condition of female greater scaup

We collected female greater scaup ( Aythya marila ) on the Yukon–Kuskokwim Delta, Alaska during two breeding seasons to determine if concentrations of 18 trace elements in livers and eggs were elevated and if hepatic concentrations correlated with body condition or affected reproductive status. Fifty-six percent, 5%, and 42% of females, respectively, had elevated hepatic cadmium (Cd: >3 μg g −1 dry weight [dw]), mercury (Hg: >3 μg g −1 dw), and selenium (Se: >10 μg g −1 dw). Somatic protein and lipid reserves were not correlated with hepatic Cd or Hg, but there was a weak negative correlation between protein and Se. Hepatic Cd, Hg, and Se were similar in females that had and had not initiated egg production. In a sample of six eggs, 33% and 100%, respectively, contained Se and Hg, but concentrations were below embryotoxicity thresholds. We conclude that trace element concentrations documented likely were not adversely impacting this study population.

Environmental Pollution↗

USGS2009

Does influenza A affect body condition of wild mallard ducks, or vice versa?

Low pathogenic avian influenza (LPAI) viruses are well documented to circulate within wild waterfowl populations (Olsen et. al. 2006 ). It has been assumed that these infections are benign with no subsequent effects on life-history parameters. The study by Latorre-Margalef et al. (2009 ; hereafter L.-M. et al. ) represents an important step, as they attempt to test this assumption in wild birds. L.-M. et al. captured migrating mallards ( Anas platyrhynchos ) at a staging area and tested them for the presence of avian influenza A virus (IAV). They related IAV infection status to body mass and duration of time spent on the staging area. Overall, the study is well designed with impressive sample sizes and the analyses are carefully conducted and presented. However, in discussing these results, the authors assume causation based upon correlation and, although they acknowledge the possibility of immunosuppression during migration due to reduced energy stores, they do not discuss it as a possible explanation for their findings. Below, we consider several of the major findings by L.-M. et al. , providing alternative explanations for the results. Because the L.-M. et al. study design is correlational, it is not possible to use their data to distinguish between their interpretations and our alternative explanations.

Proceedings of the Royal Society B: Biological Sci↗

USGS2008

Genetic evidence of intercontinental movement of avian influenza in a migratory bird: The northern pintail (Anas acuta)

The role of migratory birds in the movement of the highly pathogenic (HP) avian influenza H5N1 remains a subject of debate. Testing hypotheses regarding intercontinental movement of low pathogenic avian influenza (LPAI) viruses will help evaluate the potential that wild birds could carry Asian-origin strains of HP avian influenza to North America during migration. Previous North American assessments of LPAI genetic variation have found few Asian reassortment events. Here, we present results from whole-genome analyses of LPAI isolates collected in Alaska from the northern pintail (Anas acuta), a species that migrates between North America and Asia. Phylogenetic analyses confirmed the genetic divergence between Asian and North American strains of LPAI, but also suggested inter-continental virus exchange and at a higher frequency than previously documented. In 38 isolates from Alaska, nearly half (44.7%) had at least one gene segment more closely related to Asian than to North American strains of LPAI. Additionally, sequences of several Asian LPAI isolates from GenBank clustered more closely with North American northern pintail isolates than with other Asian origin viruses. Our data support the role of wild birds in the intercontinental transfer of influenza viruses, and reveal a higher degree of transfer in Alaska than elsewhere in North America. ?? 2008 The Authors.

Alaska↗

USGS2008

Modified method for external attachment of transmitters to birds using two subcutaneous anchors

Of the transmitter attachment techniques for birds, the subcutaneous anchor provides a secure attachment that yields relatively few secondary effects. However, the use of subcutaneous anchors has been limited by transmitter size and retention time. Using a modified method of attachment that utilized two subcutaneous anchors, we deployed 69 GPS transmitters, plus 13 VHF transmitters that were similar in size and weight to GPS models, on Pacific Black Brant ( Branta bernicla nigricans ). Prior to our study, only harnesses were used for attaching GPS transmitters on birds, mainly because GPS transmitters are too large for other external attachment techniques and implantation in the body cavity attenuates the GPS signal. Thus, to increase the size capacity of anchor attachment and to avoid the well‐documented negative effects of harnesses on behavior and survival, we added a second anchor at the transmitter's posterior end. The double‐anchor attachment technique was quickly and easily accomplished in the field, requiring bird handling times of <10 min. Incidental recoveries of tagged Brant indicate a high degree of transmitter retention. Five recaptured birds (4–6 weeks after deployment) and eight killed by hunters (3–6 mo after deployment) retained their GPS transmitters. For studies involving the use of relatively large transmitters, the double‐anchor method appears to provide a viable alternative for external attachment.

Journal of Field Ornithology↗

USGS2008

Nutrient-reserve dynamics during egg production by female Greater Scaup (Aythya marila): Relationships with timing of reproduction

We studied nutrient-reserve dynamics of female Greater Scaup ( Aythya marila ) to quantify intraspecific strategies of nutrient acquisition for egg production, particularly in relation to the seasonal timing of reproduction (i.e., date of initiation of rapid follicle growth [RFG]). We collected female Greater Scaup on the Yukon-Kuskokwim Delta, Alaska, from arrival through clutch formation during the 2002 and 2003 breeding seasons, and we subsequently conducted standard proximate body-composition analysis. Endogenous lipid, protein, and mineral reserve levels did not decline during egg production. This result differs from most other nutrient-reserve studies of waterfowl, suggesting that female Greater Scaup rely on exogenous food resources, rather than endogenous nutrient reserves, to meet the energy and nutrient costs of clutch formation. Furthermore, endogenous nutrient-reserve levels did not decline with date of RFG initiation, which indicates that body condition at initiation of egg production was similar across the nesting season. We found evidence of nutrient-reserve thresholds for initiation of RFG, in that lipid, protein, and mineral reserves were smaller in nonreproductive than in reproductive females. In light of recent conservation concerns over declining North American scaup populations, our data contrast with nutrient-reserve dynamics described for Lesser Scaup ( A. affinis ).

The Auk↗

USGS2007

Polycyclic aromatic hydrocarbon exposure in Steller's eiders ( Polysticta stelleri ) and harlequin ducks ( Histronicus histronicus ) in the Eastern Aleutian Islands, Alaska, USA

Seaducks may be affected by harmful levels of polycyclic aromatic hydrocarbons (PAHs) at seaports near the Arctic. As an indicator of exposure to PAHs, we measured hepatic enzyme 7-ethoxyresorufin- O -deethylase activity (EROD) to determine cytochrome P4501A induction in Steller's eiders ( Polysticta stelleri ) and Harlequin ducks ( Histronicus histronicus ) from Unalaska, Popof, and Unga Islands (AK, USA) in 2002 and 2003. We measured PAHs and organic contaminants in seaduck prey samples and polychlorinated biphenyl congeners in seaduck blood plasma to determine any relationship to EROD. Using Akaike's information criterion, species and site differences best explained EROD patterns: Activity was higher in Harlequin ducks than in Steller's eiders and higher at industrial than at nonindustrial sites. Site-specific concentrations of PAHs in blue mussels ([ Mytilus trossilus ] seaduck prey; PAH concentrations higher at Dutch Harbor, Unalaska, than at other sites) also was important in defining EROD patterns. Organochlorine compounds rarely were detected in prey samples. No relationship was found between polychlorinated biphenyl congeners in avian blood and EROD, which further supported inferences derived from Akaike's information criterion. Congeners were highest in seaducks from a nonindustrial or reference site, contrary to PAH patterns. To assist in interpreting the field study, 15 captive Steller's eiders were dosed with a PAH known to induce cytochrome P4501A. Dosed, captive Steller's eiders had definitive induction, but results indicated that wild Steller's eiders were exposed to PAHs or other inducing compounds at levels greater than those used in laboratory studies. Concentrations of PAHs in blue mussels at or near Dutch Harbor (&sim;1,180–5,980 ng/g) approached those found at highly contaminated sites (&sim;4,100–7,500 ng/g).

Environmental Toxicology and Chemistry↗

USGS2007

Changes in abundance and spatial distribution of geese molting near Teshekpuk Lake, Alaska: Interspecific competition or ecological change?

Goose populations molting in the Teshekpuk Lake Special Area of the National Petroleum Reserve-Alaska have changed in size and distribution over the past 30 years. Black brant (Branta bernicla nigricans) are relatively stable in numbers but are shifting from large, inland lakes to salt marshes. Concurrently, populations of greater white-fronted geese (Anser albifrons frontalis) have increased seven fold. Populations of Canada geese (Branta canadensis and/or B. hutchinsii) are stable with little indication of distributional shifts. The lesser snow goose (Anser caerulescens caerulescens) population is proportionally small, but increasing rapidly. Coastline erosion of the Beaufort Sea has altered tundra habitats by allowing saltwater intrusion, which has resulted in shifts in composition of forage plant species. We propose two alternative hypotheses for the observed shift in black brant distribution. Ecological change may have altered optimal foraging habitats for molting birds, or alternatively, interspecific competition between black brant and greater white-fronted geese may be excluding black brant from preferred habitats. Regardless of the causative mechanism, the observed shifts in species distributions are an important consideration for future resource planning. ?? 2007 Springer-Verlag.

Polar Biology↗

USGS2007

Coupling contaminants with demography: Effects of lead and selenium in Pacific common eiders

We coupled intensive population monitoring with collection of blood samples from 383 nesting Pacific common eiders ( Somateria mollisima v-nigrum ) at two locations in Alaska (USA) from 2002 to 2004. We investigated annual, geographic, and within-season variation in blood concentrations of lead and selenium; compared exposure patterns with sympatrically nesting spectacled eiders ( Somateria fischeri ); and examined relationships with clutch size, egg viability, probability of hatching, and apparent survival of adult females. Lead concentrations were elevated in 3.6% of females, and all individuals exhibited elevated selenium, most (81%) at concentrations associated with death in captive waterfowl. Blood lead and selenium concentrations varied both within and among site-years and were lower than those of spectacled eiders. During incubation, blood lead concentrations in females increased significantly (possibly via re-release of stored lead from bone), whereas selenium concentrations decreased (likely because of natural excretion). Probability of a nest containing at least one nonviable egg was positively related to blood selenium in hens, but adverse effects in other life-history variables were not supported. Although reproduction appeared to be sensitive to selenium toxicity, our data suggest that high rates of nonviability are unlikely in this population and that selenium-related reductions to clutch size would be inconsequential at the scale of overall population dynamics. We conclude that Pacific common eiders and other wild marine birds likely have higher selenium tolerances than freshwater species and that interspecific differences in exposure levels may reflect differences in reproductive strategies.

Environmental Toxicology and Chemistry↗

USGS2007

Effects of dietary selenium on tissue concentrations,pathology, oxidative stress, and immune function in common eiders (Somateria mollissima)

Common eiders ( Somateria mollissima ) were fed added Se (as L-selenomethionine) in concentrations increasing from 10 to 80 ppm in a pilot study (Study 1) or 20 (low exposure) and up to 60 (high exposure) ppm Se in Study 2. Body weights of Study 1 ducks and high-exposure ducks in Study 2 declined rapidly. Mean concentrations of Se in blood reached 32.4 ppm wet weight in Study 1 and 17.5 ppm wet weight in high-exposure birds in Study 2. Mean Se concentrations in liver ranged from 351 (low exposure, Study 2) to 1252 ppm dry weight (Study 1). Oxidative stress was evidenced by Se-associated effects on glutathione metabolism. As Se concentrations in liver increased, Se-dependent glutathione peroxidase activity, glutathione reductase activity, oxidized glutathione levels, and the ratio of hepatic oxidized to reduced glutathione increased. In Study 2, the T-cell-mediated immune response was adversely affected in high-exposure eiders, but ducks in the low-exposure group exhibited evidence of an enhanced antibody-mediated immune response. Gross lesions in high-exposure ducks included emaciation, absence of thymus, and loss of nails from digits. Histologic lesions included severe depletion of lymphoid organs, hepatopathy, and necrosis of feather pulp and feather epithelium. Field studies showed that apparently healthy sea ducks generally have higher levels of Se in liver than healthy fresh-water birds, but lower than concentrations found in our study. Data indicate that common eiders and probably other sea ducks possess a higher threshold, or adverse effect level, for Se in tissues than fresh-water species. However, common eiders developed signs of Se toxicity similar to those seen in fresh-water birds.

Journal of Toxicology and Environmental Health, Pa↗

USGS2007

Ovarian follicle dynamics of female Greater Scaup during egg production

Studies of female waterfowl nutrient reserve use during egg production require a precise understanding of ovarian follicle dynamics to correctly interpret breeding status, and, therefore, derive proper inference. Concerns over numerical declines of North American scaup have increased the need to better understand the role of female condition in reproductive performance. We quantified ovarian follicle dynamics of female Greater Scaup ( Aythya marila ) breeding on the Yukon–Kuskokwim Delta, Alaska, using a method that accounts for within day variation in follicle size. We considered several models for describing changes in follicle growth with the best supported model estimating the duration of rapid follicle growth (RFG) to be 5.20 ± 0.52 days (±95% confidence intervals) for each developing follicle. Average diameter and dry mass of preovulatory follicles were estimated to be 9.36 mm and 0.26 g, respectively, at the onset of RFG, and these follicle characteristics were 41.47 mm and 15.57 g, respectively, at ovulation. The average diameter of postovulatory follicles immediately following ovulation was estimated to be 17.35 mm, regressing quickly over several days. In addition, we derived predictive equations using diameter and dry mass to estimate the number of days before, and after, ovulation for pre- and postovulatory follicles, as well as an equation to estimate dry mass of damaged follicles. Our results allow precise definition of RFG and nest initiation dates, clutch size, and the daily energetic and nutritional demands of egg production at the individual level. This study provides the necessary foundation for additional work on Greater Scaup reproductive energetics and physiology, and offers an approach for quantifying ovarian follicle dynamics in other species.

Journal of Field Ornithology↗

USGS2007

Movements and foraging effort of Steller's Eiders and Harlequin Ducks wintering near Dutch Harbor, Alaska

We studied the movements and foraging effort of radio-marked Steller's Eiders ( Polysticta stelleri ) and Harlequin Ducks ( Histrionicus histrionicus ) to evaluate habitat quality in an area impacted by industrial activity near Dutch Harbor, Alaska. Foraging effort was relatively low, with Steller's Eiders foraging only 2.7 ± 0.6 (SE) hours per day and Harlequin Ducks 4.1 ± 0.5 hours per day. Low-foraging effort during periods of high-energetic demand generally suggests high food availability, and high food availability frequently corresponds with reductions in home range size. However, the winter ranges of Harlequin Ducks did not appear to be smaller than usual, with the mean range size in our study (5.5 ± 1.1 km 2 ) similar to that reported by previous investigators. The mean size of the winter ranges of Steller's Eiders was similar (5.1 ± 1.3 km 2 ), but no comparable estimates are available. Eutrophication of the waters near Dutch Harbor caused by seafood processing and municipal sewage effluent may have increased populations of the invertebrate prey of these sea ducks and contributed to their low-foraging effort. The threat of predation by Bald Eagles ( Haliaeetus leucocephalus ) that winter near Dutch Harbor may cause Steller's Eiders and Harlequin Ducks to move further offshore when not foraging, contributing to an increase in range sizes. Thus, the movement patterns and foraging behavior of these ducks likely represent a balance between the cost and benefits of wintering in a human-influenced environment.

Journal of Field Ornithology↗