Geology topics

Jonathan A. Warrick

Publications and source records attributed to Jonathan A. Warrick.

At least 37 records · Page 2Linked to original sources

USGS2023

Sound-side inundation and seaward erosion of a barrier island during hurricane landfall

Barrier islands are especially vulnerable to hurricanes and other large storms, owing to their mobile composition, low elevations, and detachment from the mainland. Conceptual models of barrier-island evolution emphasize ocean-side processes that drive landward migration through overwash, inlet migration, and aeolian transport. In contrast, we found that the impact of Hurricane Dorian (2019) on North Core Banks, a 36-km barrier island on the Outer Banks of North Carolina, was primarily driven by inundation of the island from Pamlico Sound, as evidenced by storm-surge model results and observations of high-water marks and wrack lines. Analysis of photogrammetry products from aerial imagery collected before and after the storm indicate the loss of about 18% of the subaerial volume of the island through the formation of over 80 erosional washout channels extending from the marsh and washover platform, through gaps in the foredunes, to the shoreline. The washout channels were largely co-located with washover fans deposited by earlier events. Net seaward export of sediment resulted in the formation of deltaic bars offshore of the channels, which became part of the post-storm berm recovery by onshore bar migration and partial filling of the washouts with washover deposits within 2 months. This event represents a volumetric setback in the overwash/rollover behavior required for barrier transgression, but the new ponds and lowland habitats may provide beneficial habit for endangered species and will likely persist for years.

North Carolina↗

USGS2022

Compilation of existing data for sand resource studies in Federal and California State Waters of the San Francisco, Oceanside, and Silver Strand littoral cell study areas along the continental shelf of California—Strategy for field studies and sand resource assessment

California↗

USGS2022

Assessment of significant sand resources in Federal and California State Waters of the San Francisco, Oceanside, and Silver Strand littoral cell study areas along the continental shelf of California

Executive Summary The Sand Resources Project was established through collaborative agreements between the U.S. Geological Survey (USGS), the Bureau of Ocean Energy Management (BOEM), and the California Ocean Protection Council (OPC) with the purpose of evaluating sand and gravel resources in Federal and California State Waters for potential use in future beach-nourishment projects. Project partners worked in collaboration with California Coastal Sediment Management Workgroup (CSMW) members to define priority study areas for this work based on the potential for finding sand within the broader region and the needs for this sand as shown by beach erosion areas of concern in the adjacent littoral cells. The final study areas were defined to be (1) the San Francisco Littoral Cell, (2) the Oceanside Littoral Cell, and (3) the Silver Strand Littoral Cell. A two-stage approach was used to assess the study areas. The initial stage was a synthesis of the existing geophysical and sediment-sampling data in each area. This allowed for evaluations of the data availability, data gaps, and general patterns of sediment thickness and grain size. This synthesis was published in a separate USGS open-file report (Warrick and others, 2022). The findings from this assessment were used to refine study area boundaries and develop sampling plans for stage two of the project. Stage two of the project is the collection, processing, and synthesis of new data, including high-resolution geophysical surveys and sediment cores—this report addresses the second stage. The work focuses on two of the study areas—the San Francisco and the Oceanside Littoral Cells, where several research cruises have been conducted. A more limited, exploratory approach was used for the Silver Strand Littoral Cell, owing to the lack of existing high-resolution bathymetric data for this study area. The data collected provide new information about the three study areas, including sediment thickness, grain-size distributions, and total organic carbon. Sediment in all three study areas of the Sand Resources Study was suitable for beach nourishment, as reflected by their grain-size distributions and sediment thicknesses. For example, sandy sediment in the San Francisco Littoral Cell study area was on and immediately outside of the ebb-tidal bar of the San Francisco Bay, a landform that has a strong influence on grain-size patterns of the region. The presence of thick sediment deposits in this area was interpreted to be a function of tectonics, which has caused physical features that include a graben north of the Golden Gate whose deposits were thicker and siltier than the remaining area. Sandy sediment on the inner and outer parts of the continental shelf in the Oceanside Littoral Cell may be useful for nourishment, whereas the midshelf between these areas was dominated by silty sediment. Sediment in the Silver Strand Littoral Cell, which was only sampled selectively, had the greatest potential for beach nourishment because of the greater prevalence of beach-comparable grain sizes, especially in the more distal and deeper areas where medium sands were found. The Sand Resources Project did identify several sandy regions of the continental shelf that are deeper than dredging technologies currently (2022) available in the United States, which are generally limited to 30 meters (m) water depth or less. Although sandy sediment exists in all three study areas at water depths of 30 m or less, additional sediment supplies—most of which are in Federal Waters—are present in deeper settings, especially for the Oceanside and Silver Strand Littoral Cell study areas. Although the Silver Strand Littoral Cell study area was found to be considerably replete in sand resources, these conclusions are based on a limited sampling exercise across that study area. Thus, it may be beneficial to complete a more thorough characterization of the sediment resources in the Silver Strand Littoral Cell study area if it is determined that a need for sandy coastal sediment exists in this region. As a result of the Sand Resources Project, several areas of sand resources in Federal and California State Waters were found where they were previously unknown. As such, this project may provide important data for future coastal-management decisions in California, and it should provide a model for future investigations of sediment resources in other regions of the State.

California↗

USGS2022

The future of coastal monitoring through satellite remote sensing

Satellite remote sensing is transforming coastal science from a “data-poor” field into a “data-rich” field. Sandy beaches are dynamic landscapes that change in response to long-term pressures, short-term pulses, and anthropogenic interventions. Until recently, the rate and breadth of beach change have outpaced our ability to monitor those changes, due to the spatiotemporal limitations of our observational capacity. Over the past several decades, only a handful of beaches worldwide have been regularly monitored with accurate yet expensive in situ surveys. The long-term coastal-change data of these few well-monitored beaches have led to in-depth understanding of many site-specific coastal processes. However, because the best-monitored beaches are not representative of all beaches, much remains unknown about the processes and fate of the other >99% of unmonitored beaches worldwide. The fleet of Earth-observing satellites has enabled multiscale monitoring of beaches, for the very first time, by providing imagery with global coverage and up to daily frequency. The long-standing and ever-expanding archive of satellite imagery will enable coastal scientists to investigate coastal change at sites vulnerable to future sea-level rise, that is, (almost) everywhere. In the past decade, our capability to observe coastal change from space has grown substantially with computing and algorithmic power. Yet, further advances are needed in automating monitoring using machine learning, deep learning, and computer vision to fully leverage this massive treasure trove of data. Extensive monitoring and investigation of the causes and effects of coastal change at the requisite spatiotemporal scales will provide coastal managers with additional, valuable information to evaluate problems and solutions, addressing the potential for widespread beach loss due to accelerated sea-level rise, development, and reduced sediment supply. Monitoring from Earth-observing satellites is currently the only means of providing seamless data with high spatiotemporal resolution at the global scale of the impending impacts of climate change on coastal systems.

Cambridge Prisms: Coastal Futures↗

USGS2022

Measuring and attributing sedimentary and geomorphic responses to modern climate change: Challenges and opportunities

Today, climate change is affecting virtually all terrestrial and nearshore settings. This commentary discusses the challenges of measuring climate-driven physical landscape responses to modern global warming: short and incomplete data records, land use and seismicity masking climatic effects, biases in data availability and resolution, and signal attenuation in sedimentary systems. We identify opportunities to learn from historical and paleo data, select especially sensitive study sites, and report null results to better characterize the extent and nuances of climate-change effects. We then discuss efforts to improve attribution practices, which will lead to better predictive capabilities. We encourage the earth-science community to prioritize scientific research on climate-driven physical landscape changes so that societies will be better prepared to manage the effects on health and safety, infrastructure, water–food–energy security, economics, and ecosystems that follow from climate-driven physical landscape change.

Earth's Future↗

USGS2022

Fires, floods and other extreme events – How watershed processes under climate change will shape our coastlines

Ongoing sea-level rise has brought renewed focus on terrestrial sediment supply to the coast because of its strong influence on whether and how long beaches, marshes and other coastal landforms may persist into the future. Here, we summarise findings of sediment discharge from several coastal rivers, revealing that infrequent, large-magnitude events have disproportionate influence on the morphodynamics of coastal landforms and littoral cells. These event-dominated effects are most pronounced for small, steep mountainous rivers that supply beach and wetland sediment along the world’s active tectonic margins, although infrequent events are important drivers of sediment discharge for rivers worldwide. Additionally, extreme events (recurrence intervals of decades to centuries) that follow wildfires, earthquakes, volcanic eruptions, extreme precipitation or – most notably – combinations of these factors can redefine coastal sediment budgets and morphology. Some of these extreme events (e.g., wildfires plus rainfall) are increasing in magnitude and frequency under modern climate warming, with the likely result of increasing sediment flux to affected coastlines. Climate change is also altering watershed processes in both high latitudes and high altitudes, resulting in increased sediment supply to downstream catchments. We conclude that sediment inputs to coastal systems are highly variable with time, and that the variability and trends in sediment input are as important to characterise as long-term averages.

Cambridge Prisms: Coastal Futures↗

USGS2022

Fire (plus) flood (equals) beach: Coastal response to an exceptional river sediment discharge event

Wildfire and post-fire rainfall have resounding effects on hillslope processes and sediment yields of mountainous landscapes. Yet, it remains unclear how fire–flood sequences influence downstream coastal littoral systems. It is timely to examine terrestrial–coastal connections because climate change is increasing the frequency, size, and intensity of wildfires, altering precipitation rates, and accelerating sea-level rise; and these factors can be understood as contrasting accretionary and erosive agents for coastal systems. Here we provide new satellite-derived shoreline measurements of Big Sur, California and show how river sediment discharge significantly influenced shoreline positions during the past several decades. A 2016 wildfire followed by record precipitation increased sediment discharge in the Big Sur River and resulted in almost half of the total river sediment load of the past 50 years (~ 2.2 of ~ 4.8 Mt). Roughly 30% of this river sediment was inferred to be littoral-grade sand and was incorporated into the littoral cell, causing the widest beaches in the 37-year satellite record and spreading downcoast over timescales of years. Hence, the impact of fire–flood events on coastal sediment budgets may be substantial, and these impacts may increase with time considering projected intensification of wildfires and extreme rain events under global warming.

California↗

USGS2022

Human-in-the-Loop segmentation of earth surface imagery

Segmentation, or the classification of pixels (grid cells) in imagery, is ubiquitously applied in the natural sciences. Manual methods are often prohibitively time-consuming, especially those images consisting of small objects and/or significant spatial heterogeneity of colors or textures. Labeling complicated regions of transition that in Earth surface imagery are represented by collections of mixed-pixels, -textures, and -spectral signatures, can be especially error-prone because it is difficult to reliably unmix, identify and delineate consistently. However, the success of supervised machine learning (ML) approaches is entirely dependent on good label data. We describe a fast, semi-automated, method for interactive segmentation of N-dimensional (x, y, N) images into two-dimensional (x, y) label images. It uses human-in-the-loop ML to achieve consensus between the labeler and a model in an iterative workflow. The technique is reproducible; the sequence of decisions made by human labeler and ML algorithms can be encoded to file, so the entire process can be played back and new outputs generated with alternative decisions and/or algorithms. We illustrate the scientific potential of segmentation of imagery of diverse settings and image types using six case studies from river, estuarine, and open coast environments. These photographic and non-photographic imagery consist of 1- and 3-bands on regular and irregular grids ranging from centimeters to tens of meters. We demonstrate high levels of agreement in label images generated by several labelers on the same imagery, and make suggestions to achieve consensus and measure uncertainty, ideal for widespread application in training supervised ML for image segmentation.

Earth and Space Science↗

USGS2022

Crowd-sourced SfM: Best practices for high resolution monitoring of coastal cliffs and bluffs

Structure from motion (SfM) photogrammetry is an increasingly common technique for measuring landscape change over time by deriving 3D point clouds and surface models from overlapping photographs. Traditional change detection approaches require photos that are geotagged with a differential GPS (DGPS) location, which requires expensive equipment that can limit the ability of communities and researchers to perform frequent ( i.e. daily, weekly, and/or monthly) surveys. Crowd-sourced photos can lower the barrier to entry and substantially increase the frequency of surveys, although such photos often lack accurate location information and can vary in quality. This paper presents a SfM approach for monitoring environmental change in high relief coastal environments that does not require all photos have DGPS location information and does not require field survey data. A 1.5 km section of coastal bluffs near the Elwha River Delta (Washington state) is used to demonstrate the efficacy of this approach. Photos of the bluff were collected with a digital SLR camera or phone camera while either on foot along the beach or from a boat as part of monitoring following removal of two large dams along the Elwha River during 2011–2013. Only 33% of photos had DGPS location information, whereas most photos had no location information or locations that were accurate to a couple of meters. All photos were processed using 3D, 4D, and fixed-floating (FF) SfM alignment methods and the resulting dense point clouds are used to compare the different alignment approaches with crowd-sourced photo sets. Results demonstrate that 4D and FF approaches are more likely to reconstruct and are more accurate than the 3D approach. While the 4D and FF have comparable accuracies, the FF approach is several orders of magnitude more efficient, as this method can leverage camera location information from relatively few photos to improve the accuracy of all aligned and derived products. Effectively utilizing crowd-sourced photos in SfM change detection can improve the frequency of surveying a landscape in a more cost-effective approach that also has potential for citizen-science engagement and communication. This is especially important for data-poor environments such as high-relief coastal cliffs and bluffs, where near-nadir imagery and LIDAR may fail to accurately capture near-vertical cliffs or bluff faces. Based on the analysis of different photo alignment and filtering approaches, we present suggested best practices for engaging citizen scientists in coastal cliff and bluff monitoring efforts through collecting photos amenable for SfM reconstruction.

Washington↗

USGS2021

Labeling poststorm coastal imagery for machine learning: Measurement of interrater agreement

Classifying images using supervised machine learning (ML) relies on labeled training data—classes or text descriptions, for example, associated with each image. Data-driven models are only as good as the data used for training, and this points to the importance of high-quality labeled data for developing a ML model that has predictive skill. Labeling data is typically a time-consuming, manual process. Here, we investigate the process of labeling data, with a specific focus on coastal aerial imagery captured in the wake of hurricanes that affected the Atlantic and Gulf Coasts of the United States. The imagery data set is a rich observational record of storm impacts and coastal change, but the imagery requires labeling to render that information accessible. We created an online interface that served labelers a stream of images and a fixed set of questions. A total of 1,600 images were labeled by at least two or as many as seven coastal scientists. We used the resulting data set to investigate interrater agreement: the extent to which labelers labeled each image similarly. Interrater agreement scores, assessed with percent agreement and Krippendorff's alpha, are higher when the questions posed to labelers are relatively simple, when the labelers are provided with a user manual, and when images are smaller. Experiments in interrater agreement point toward the benefit of multiple labelers for understanding the uncertainty in labeling data for machine learning research.

Earth and Space Science↗

USGS2021

Processing coastal imagery with Agisoft Metashape Professional Edition, version 1.6—Structure from motion workflow documentation

Introduction Structure from motion (SFM) has become an integral technique in coastal change assessment; the U.S. Geological Survey (USGS) used Agisoft Metashape Professional Edition photogrammetry software to develop a workflow that processes coastline aerial imagery collected in response to storms since Hurricane Florence in 2018. This report details step-by-step instructions to create three-dimensional (3D) spatial products from both singular and repeated collections of shoreline aerial imagery. The products can be used for real-time hazard guidance and future forecasting and recovery endeavors.

Open-File Report↗

USGS2021

A survey of storm-induced seaward-transport features observed during the 2019 and 2020 hurricane seasons

Hurricanes are known to play a critical role in reshaping coastlines, but often only impacts on the open ocean coast are considered, ignoring seaward-directed forces and responses. The identification of subaerial evidence for storm-induced seaward transport is a critical step towards understanding its impact on coastal resiliency. The visual features, found in the National Oceanic and Atmospheric Administration, National Geodetic Survey Emergency Response Imagery (ERI) collected after recent hurricanes on the U.S. East Atlantic and Gulf of Mexico coasts, include scours and channelized erosion, but also deposition on the shoreface or in the nearshore as deltas and fans of various sizes. We catalog all available ERI and describe recently formed features found on the North Core Banks, North Carolina, after Hurricane Dorian (2019); the Carolina coasts after Hurricane Isaias (2020); the Isles Dernieres, Louisiana, after Hurricane Zeta (2020); and the southwest coast of Louisiana, after Hurricanes Laura and Delta (2020). Hundreds of features were identified over nearly 200 km of coastline with the density of features exceeding 20 per km in some areas. Individual features range in size from 5 m to 500 m in the alongshore, with similar dimensions in the cross-shore direction, including the formation or reactivation of outlets. The extensive occurrence of these storm-induced return-flow and seawardflow morphologic features demonstrates that their role in coastal evolution and resilience may be more prominent than previously thought. Based on these observations we propose clarifying terms for return- and seaward-flow features to distinguish them from more frequently documented landward-flow features and advocate for their inclusion in coastal change hazards classification schemes and coastal evolution morphodynamic models.

southeast United States↗

USGS2020

Littoral sediment from rivers: Patterns, rates and processes of river mouth morphodynamics

Rivers provide important sediment inputs to many littoral cells, thereby replenishing sand and gravel of beaches around the world. However, there is limited information about the patterns and processes of littoral-grade sediment transfer from rivers into coastal systems. Here I address these information gaps by examining topographic and bathymetric data of river mouths and constructing sediment budgets to characterize time-dependent patterns of onshore, offshore, and alongshore transport. Two river deltas, which differ in their morphology, were used in this study: the Elwha River, Washington, which builds a mixed sediment Gilbert-style delta, and the Santa Clara River, California, which builds a cross-shore dispersed sand delta from hyperpycnal flows. During and after sediment discharge events, both systems exhibited a similar evolution composed of three phases: (i) submarine delta growth during offshore transport of river sediment, (ii) onshore-dominated transport from the submarine delta to a subaerial river mouth berm, and (iii) longshore-dominated transport away from the river mouth following subaerial berm development. Although stage (ii) occurred within days to weeks for the systems studied and was associated with the greatest rates of net erosion and deposition, onshore transport of sediment from submarine deposit to the beach persisted for years following the river discharge event. These morphodynamics were similar to simple equilibrium profile concepts that were modified with an onshore-dominated cross-shore transport rule. Additionally, both study sites revealed that littoral-grade sediment was initially exported to depths beyond the active littoral cell (i.e., below the depth of closure) during the stage (i). Following several years of reworking by coastal processes, bathymetric surveys suggested that 14 and 46% of the original volume of littoral-grade sediment discharged by the Santa Clara and Elwha Rivers, respectively, continued to be below the depth of closure. Combined, this suggests that integration of river sediment into a littoral cell can be a multi-year process and that the full volume of littoral-grade sediment discharged by small rivers may not be integrated into littoral cells because of sand and gravel “losses” to the continental shelf.

California, Washington↗

USGS2020

Cliff Feature Delineation Tool and Baseline Builder version 1.0 user guide

Coastal cliffs constitute 80 percent of the world’s coastline, with seacliffs fronting a large proportion of the U.S. West Coast shoreline, particularly in California. Erosion of coastal cliffs can threaten infrastructure and human life, yet the spatial and temporal scope of cliff studies have been limited by cumbersome traditional methods that rely on the manual interpretation of seacliff features—especially seacliff toes and top edges. The Cliff Feature Delineation Tool (CFDT) and the Baseline Builder Tool are designed to increase the efficiency of deriving seacliff features from remote sensing datasets by utilizing an automated, quantitative approach that eliminates traditional interpretive methods and ensures reproducibility. This document functions as a user guide for operating the Cliff Feature Delineation Tool and Baseline Builder Tool and includes a walkthrough of data-visualization and data-review workflows for the tools’ three-dimensional (3D) cliff feature outputs. Also included is a brief overview of cliff feature delineation at the U.S. Geological Survey (USGS) and a detailed description of the tools’ algorithmic logic.

Open-File Report↗

USGS2020

Community for data integration 2018 funded project report

The U.S. Geological Survey Community for Data Integration annually funds small projects focusing on data integration for interdisciplinary research, innovative data management, and demonstration of new technologies. This report provides a summary of the 10 projects funded in fiscal year 2018, outlining their goals, activities, and accomplishments.

Open-File Report↗

USGS2020

Accurate bathymetric maps from underwater digital imagery without ground control

Structure-from-Motion (SfM) photogrammetry can be used with digital underwater photographs to generate high-resolution bathymetry and orthomosaics with millimeter-to-centimeter scale resolution at relatively low cost. Although these products are useful for assessing species diversity and health, they have additional utility for quantifying benthic community structure, such as coral growth and fine-scale elevation change over time, if accurate length scales and georeferencing are included. This georeferencing is commonly provided with “ground control,” such as pre-installed seafloor benchmarks or identifiable “static” features, which can be difficult and time consuming to install, survey, and maintain. To address these challenges, we developed the SfM Quantitative Underwater Imaging Device with Five Cameras (SQUID-5), a towed surface vehicle with an onboard survey-grade Global Navigation Satellite System (GNSS) and five rigidly mounted downward-looking cameras with overlapping views of the seafloor. The cameras are tightly synchronized with both the GNSS and each other to collect quintet photo sets and record the precise location of every collection event. The system was field tested in July 2019 in the U.S. Florida Keys, in water depths ranging from 3 to 9 m over a variety of bottom types. Surveying accuracy was assessed using pre-installed stations with known coordinates, machined scale bars, and two independent surveys of a site to evaluate repeatability. Under a range of sea conditions, ambient lighting, and water clarity, we were able to map living and senile coral reef habitats and sand waves at mm-scale resolution. Data were processed using best practice SfM techniques without ground control and local measurement errors of horizontal and vertical scales were consistently sub-millimeter, equivalent to 0.013% RMSE relative to water depth. Survey-to-survey repeatability RMSE was on the order of 3 cm without georeferencing but could be improved to several millimeters with the incorporation of one or more non-surveyed marker points. We demonstrate that the SQUID-5 platform can map complex coral reef and other seafloor habitats and measure mm-to-cm scale changes in the morphology and location of seafloor features over time without pre-existing ground control.

Florida↗

USGS2020

A model for the growth and development of wave-dominated deltas fed by small mountainous rivers: Insights from the Elwha River delta, Washington

Observations from ground-penetrating radar, sediment cores, elevation surveys and aerial imagery are used to understand the development of the Elwha River delta in north-western Washington, USA, which prograded as a result of two dam removals in late 2011. Swash-bar, foreshore and swale depositional elements are recognized within ground-penetrating radar profiles and sediment cores. A model for the growth and development of small mountainous river wave-dominated deltas is proposed based on observation of both the fluvial and deltaic settings. If enough sediment is available in the fluvial system, mouth-bars form after higher than average river discharge events, creating a large platform seaward of the subaqueous delta plain. Swash-bars form concurrently or within a month of mouth-bar deposition as a result of wave action. Fair-weather waves drive swash-bar migration landward and in the direction of littoral drift. The signature of swash-bar welding to the shoreline is landward-dipping reflections, as a result of overwash processes and slipface migration. However, most swash-bars are eroded by the river mouth, as only 10 of the 37 swash-bars that formed between August 2011 and July 2016 survived within the Elwha River delta. The swash-bars that do survive either amalgamate onto the shoreline or an earlier deposited swash-bar, forming a single larger barrier at the delta front. In asymmetrical deltas, the signature of swash-bar welding is more likely to be preserved on the downdrift side of the delta, where formation is more likely and accommodation behind newer swash-bars preserves older deposits. On small mountainous river deltas, welded swash-bars may be more indicative of a large sediment pulse to the system, rather than large hydrological events.

Washington↗

USGS2019

Commentary: Variability in shelf sedimentation in response to fluvial sediment supply and coastal erosion over the past 1,000 Years in Monterey Bay, CA, United States

A commentary on: Variability in Shelf Sedimentation in Response to Fluvial Sediment Supply and Coastal Erosion Over the Past 1,000 Years in Monterey Bay, CA, United States. by Carlin J., Addison J., Wagner A., Schwartz V., Hayward J., Severin V. (2019) Front. Earth Sci., 7:113. doi: 10.3389/feart.2019.00113

Frontiers in Earth Science↗