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Gulf Coast Ecosystem Restoration Task Force---Gulf of Mexico Ecosystem Science Assessment and Needs

The Gulf Coast Ecosystem Restoration Task Force (GCERTF) was established by Executive Order 13554 as a result of recommendations from “America’s Gulf Coast: A Long-term Recovery Plan after the Deepwater Horizon Oil Spill” by Secretary of the Navy Ray Mabus (Mabus Report). The GCERTF consists of members from 11 Federal agencies and representatives from each State bordering the Gulf of Mexico. The GCERTF was charged to develop a holistic, long-term, science-based Regional Ecosystem Restoration Strategy for the Gulf of Mexico. Federal and State agencies staffed the GCERTF with experts in fields such as policy, budgeting, and science to help develop the Strategy. The Strategy was built on existing authorities and resources and represents enhanced collaboration and a recognition of the shared responsibility among Federal and State governments to restore the Gulf Coast ecosystem. In this time of severe fiscal constraints, Task Force member agencies and States are committed to establishing shared priorities and working together to achieve them. As part of this effort, three staffers, one National Oceanic and Atmospheric Administration (NOAA) scientist and two U.S. Geological Survey (USGS) scientists, created and led a Science Coordination Team (SCT) to guide scientific input into the development of the Gulf of Mexico Regional Ecosystem Restoration Strategy. The SCT leads from the GCERTF coordinated more than 70 scientists from the Federal and State Task Force member agencies to participate in development of a restoration-oriented science document focused on the entire Gulf of Mexico, from inland watersheds to the deep blue waters. The SCT leads and scientists were organized into six different working groups based on expanded goals from the Mabus Report: Coastal habitats are healthy and resilient. Living coastal and marine resources are healthy, diverse, and sustainable. Coastal communities are adaptive and resilient. Storm buffers are sustainable. Inland habitats and watersheds are managed to help support healthy and sustainable Gulf of Mexico ecosystems. Offshore environments are healthy and well managed Each working group was charged with defining their specific goal, describing the current conditions related to that goal (for example, the status of coastal habitats in the Gulf of Mexico), providing highlevel activities needed to further define and achieve the goal, with associated outcome-based performance indicators, and identifying the scientific gaps in understanding to accomplish the goal and implement the recommended activities. The overall scientific assessment reveals that the Gulf of Mexico ecosystem continues to suffer from extensive degradation, and action is necessary to develop a healthy, resilient, and sustainable Gulf of Mexico ecosystem. The six groups also were tasked with outlining the necessary monitoring, modeling, and research needs to aid in achieving the goals. Recognizing that (1) the scientific needs (monitoring, modeling, and research) overlap among many of the goals, and (2) an overarching scientific framework could be developed to implement the necessary science in support of the Strategy, a seventh group was created with several members from each of the original six working groups. This seventh group compiled all of the cross-cutting monitoring, modeling, and research needs previously identified by the individual groups. These scientific requirements are found in Chapter 5 of this document. The seventh group also has developed a Science Plan, outlined in Chapter 6. The Science Plan provides the basic science infrastructure to support the overall Gulf restoration program and Strategy. The Science Plan allows for the development of an iterative and flexible approach to adaptive management and decision-making related to restoration projects based on sound science that includes monitoring, modeling, and research. Taken in its entirety, this document helps to articulate the current state of the system and the critical science needs to support effective restoration of the Gulf of Mexico resources that have been trending towards decline for decades.

Report

Gulf of Mexico Integrated Science - Tampa Bay Study Overview

The U.S. Geological Survey's Gulf of Mexico Integrated Science - Tampa Bay Study combines the expertise of federal, state, and local partners to address some of the most pressing ecological problems of the Tampa Bay estuary. This project serves as a template for integrated research projects in other coastal ecosystems in the nation. The Tampa Bay Study focuses on the scientific needs of the Bay, as identified by resource managers.

Open-File Report

Northern Gulf of Mexico: USGS science contributions to a resilient coast, 2006-2011

The devastating hurricane season of 2005 challenged U.S. Geological Survey (USGS) to develop a science base for resource managers and policy makers that could provide an understanding of the multiple stressors and influence affecting the northern Gulf of Mexico coast and to rack changes in linked coastal systems. The complexity of the Gulf Coast requires a science strategy for data collection and data reporting that is consistent across regional ecosystems and that can be applied to both short-term and long-term responses to stressors.

Gulf Of Mexico

Science supporting Gulf of Mexico oil-spill response, mitigation, and restoration activities-Assessment, monitoring, mapping, and coordination

The St. Petersburg Coastal and Marine Science Center of the U.S. Geological Survey (USGS) investigates physical processes related to coastal and marine environments and societal implications related to natural hazards, resource sustainability, and environmental change. Immediately after the Deepwater Horizon event, the USGS began responding to data requests, directing response personnel, and providing coastal and shelf geophysical data to coastal-resource managers. The USGS provided oil-spill responders with up-to-date coastal bathymetry, geologic data, and maps characterizing vulnerability and levels of risk from potential spill impacts in Louisiana, Mississippi, and Alabama. Baseline conditions prior to any spill impacts were documented through programs that included shoreline sampling and sediment coring from east Texas to the east coast of Florida and aerial photography of many environmentally sensitive Gulf coastal areas. The USGS responded to numerous verbal and written data requests from Federal, State, and local partners and academic institutions with USGS scientific staff participating in the Coast Guard Unified Commands (UC) and Operational Science Advisory Teams (OSAT). The USGS conducted technical review of reports and plans for many response activities. Oil-spill responders, managers, and personnel on the ground, including partners such as the National Park Service, Gulf Islands National Seashore, Chandeleur Islands Refuge, and State agencies, continue to rely on USGS products.

General Information Product

Gulf of Mexico Integrated Science - Tampa Bay Study - Data Information Management System (DIMS)

The Tampa Bay Integrated Science Study is an effort by the U.S. Geological Survey (USGS) that combines the expertise of federal, state and local partners to address some of the most pressing ecological problems of the Tampa Bay estuary. This project serves as a template for the application of integrated research projects in other estuaries in the Gulf of Mexico. Efficient information and data distribution for the Tampa Bay Study has required the development of a Data Information Management System (DIMS). This information system is being used as an outreach management tool, providing information to scientists, decision makers and the public on the coastal resources of the Gulf of Mexico.

Open-File Report

Gulf of Mexico Integrated Science - Tampa Bay Study: Watershed and Estuary Mapping

Tampa Bay, Florida, and its environs have experienced phenomenal urban growth and significant changes in land-use practices over the past 50 years. This trend is expected to continue, with human activity intensifying and affecting a wider geographic region. Urbanization creates impervious surfaces, which increase stormwater runoff and contribute to greater amounts of chemicals flowing into coastal waters. Man-made structures including bridges, a gas pipeline, desalination plant, ports, navigation channels, and extensive sea walls have been built and will continue to be maintained and modified. This task of the Tampa Bay Study aims to provide a better understanding of these and other man-made impacts on the Tampa Bay region.

Open-File Report

Gulf of Mexico integrated science - Tampa Bay study, the impact of groundwater and contaminants on Tampa Bay

Despite the recreational and economic value of coastal bays and estuaries, these ecosystems are often among our most 'troubled' natural environments. Urbanization, agriculture, mining, and shipping are just a few activities that can have a profound and lasting impact on the coastal zone. In order to maintain a healthy coastal ecosystem, it is crucial to develop reasonable management practices around expert scientific information. We still have much to learn about the quantity and quality of groundwater being discharged into Tampa Bay, Florida. We also need to improve our knowledge of a wide range of contaminants entering the bay and must be able to determine where they accumulate in seafloor sediments. Such buried contaminants can potentially be harmful to biota if they are released to the water column. U.S. Geological Survey (USGS) scientists and research partners from the University of South Florida (USF), the University of Florida (UF), and the Florida Marine Research Institute (FMRI) are mapping sources of groundwater, measuring groundwater flow into Tampa Bay, and assessing the impact of contaminants and sediments on bay water quality and ecosystem health.

Open-File Report

Gulf of Mexico Integrated Science - Tampa Bay Study: Examining the Impact of Urbanization on Seafloor Habitats

Seafloor habitats, such as seagrass beds, provide essential habitat for fish and marine mammals. For many years, the study of seagrass vitality has been a priority for scientists and resource managers working in Tampa Bay. Seafloor habitats are extremely sensitive to changes in water quality. Like a canary in a coal mine, seagrass can serve as an ecological indicator of estuary health. Between the 1940s and the 1970s, seagrass gradually died in Tampa Bay. This loss has been attributed to a rise in urbanization and an increase in nutrient loading into the bay. Better treatment of industrial wastewater and runoff beginning in the 1980s resulted in the continuous recovery of seagrass beds. However, in the mid-1990s, the recovery began to level off in areas where good water quality was expected to support continued seagrass recovery, demonstrating that nutrient loading may be only one factor impacting seagrass health. Researchers now are trying to determine what might be affecting the recovery of seagrass in these areas. Currently, little is understood about the effects that other aspects of urbanization and natural change, such as groundwater and sediment quality, might have on seagrass vitality. This segment of the Tampa Bay integrated science study is intended to identify, quantify, and develop models that illustrate the impact that urbanization may have on seafloor habitat distribution, health, and restoration.

Open-File Report

Gulf of Mexico integrated science - Tampa Bay study - Characterization of tidal wetlands

Tidal wetlands in Tampa Bay, Florida, consist of mangrove forests and salt marshes. Wetlands buffer storm surges, provide fish and wildlife habitat, and enhance water quality through the removal of water-borne nutrients and contaminants. Substantial areas of both mangroves and salt marshes have been lost to agricultural, residential, and industrial development in this urban estuary. Wetlands researchers are characterizing the biological components of tidal wetlands and examining the physical factors such as salinity, tidal flushing, and sediment deposition that control the composition of tidal wetland habitats. Wetlands restoration is a priority of resource managers in Tampa Bay. Baseline studies such as these are needed for successful restoration planning and evaluation.

Florida

Archive of Sidescan Sonar and Swath Bathymetry Data Collected During USGS Cruise 13CCT04 Offshore of Petit Bois Island, Gulf Islands National Seashore, Mississippi, August 2013

In August of 2013, the U.S. Geological Survey conducted a geophysical survey offshore of Petit Bois Island, Mississippi. This effort was part of the U.S. Geological Survey Gulf of Mexico Science Coordination partnership with the U.S. Army Corps of Engineers to assist the Mississippi Coastal Improvements Program and the Northern Gulf of Mexico Ecosystem Change and Hazards Susceptibility Project, by mapping the shallow geologic stratigraphic framework of the Mississippi Barrier Island Complex. This geophysical survey will provide additional data necessary for scientists to define, interpret, and provide baseline bathymetry and seafloor habitat for this area, and to aid scientists in predicting future geomorphological changes of the islands with respect to climate change, storm impact, and sea-level rise. Furthermore, these data will provide information for barrier island restoration, particularly in Camille Cut, and protection for the historical Fort Massachusetts on Ship Island, Mississippi. The geophysical data were collected during one cruise ( USGS Field Activity Numbers 13CCT04 ) aboard the Research Vessel Tommy Munro offshore along the gulf side of Petit Bois Island, Gulf Islands National Seashore, Mississippi. Data were acquired with the following equipment: a Systems Engineering and Assessment, Ltd., SWATH plus interferometric sonar (468 kilohertz (kHz)), an EdgeTech 424 (4-24 kHz), an EdgeTech 525i chirp subbottom profiling system, and a Klein 3900 sidescan sonar system. This report serves as an archive of the processed interferometric swath bathymetry and sidescan sonar data. Geographic information system data products include an interpolated digital elevation model, an acoustic backscatter mosaic, trackline maps, and point data files. Additional files include error analysis maps, Field Activity Collection System logs, and formal Federal Geographic Data Committee metadata. NOTE: These data are scientific in nature and are not to be used for navigation. Any use of trade names is for descriptive purposes only and does not imply endorsement by the U.S. Government.

Mississippi

Archive of side scan sonar and swath bathymetry data collected during USGS cruise 10CCT01 offshore of Cat Island, Gulf Islands National Seashore, Mississippi, March 2010

In March of 2010, the U.S. Geological Survey (USGS) conducted geophysical surveys east of Cat Island, Mississippi (fig. 1). The efforts were part of the USGS Gulf of Mexico Science Coordination partnership with the U.S. Army Corps of Engineers (USACE) to assist the Mississippi Coastal Improvements Program (MsCIP) and the Northern Gulf of Mexico (NGOM) Ecosystem Change and Hazards Susceptibility Project by mapping the shallow geological stratigraphic framework of the Mississippi Barrier Island Complex. These geophysical surveys will provide the data necessary for scientists to define, interpret, and provide baseline bathymetry and seafloor habitat for this area and to aid scientists in predicting future geomorpholocial changes of the islands with respect to climate change, storm impact, and sea-level rise. Furthermore, these data will provide information for barrier island restoration, particularly in Camille Cut, and provide protection for the historical Fort Massachusetts. For more information refer to http://ngom.usgs.gov/gomsc/mscip/index.html. This report serves as an archive of the processed swath bathymetry and side scan sonar data (SSS). Data products herein include gridded and interpolated surfaces, surface images, and x,y,z data products for both swath bathymetry and side scan sonar imagery. Additional files include trackline maps, navigation files, GIS files, Field Activity Collection System (FACS) logs, and formal FGDC metadata. Scanned images of the handwritten FACS logs and digital FACS logs are also provided as PDF files. Refer to the Acronyms page for expansion of acronyms and abbreviations used in this report or hold the cursor over an acronym for a pop-up explanation. The USGS St. Petersburg Coastal and Marine Science Center assigns a unique identifier to each cruise or field activity. For example, 10CCT01 tells us the data were collected in 2010 for the Coastal Change and Transport (CCT) study and the data were collected during the first field activity for that project in that calendar year. Refer to http://walrus.wr.usgs.gov/infobank/programs/html/definition/activity.html for a detailed description of the method used to assign the field activity ID. Data were collected using a 26-foot (ft) Glacier Bay Catamaran. Side scan sonar and interferometric swath bathymetry data were collected simultaneously along the tracklines. The side scan sonar towfish was towed off the port side just slightly behind the vessel, close to the seafloor. The interferometric swath transducer was sled-mounted on a rail attached between the catamaran hulls. During the survey the sled is secured into position. Navigation was acquired with a CodaOctopus Octopus F190 Precision Attitude and Positioning System and differentially corrected with OmniSTAR. See the digital FACS equipment log for details about the acquisition equipment used. Both raw datasets were stored digitally and processed using CARIS HIPS and SIPS software at the USGS St. Petersburg Coastal and Marine Science Center. For more information on processing refer to the Equipment and Processing page. Post-processing of the swath dataset revealed a motion artifact that is attributed to movement of the pole that the swath transducers are attached to in relation to the boat. The survey took place in the winter months, in which strong winds and rough waves contributed to a reduction in data quality. The rough seas contributed to both the movement of the pole and the very high noise base seen in the raw amplitude data of the side scan sonar. Chirp data were also collected during this survey and are archived separately.

Mississippi

Archive of side scan sonar and swath bathymetry data collected during USGS cruise 10CCT03 offshore of the Gulf Islands National Seashore, Mississippi, from East Ship Island, Mississippi, to Dauphin Island, Alabama, April 2010

In April of 2010, the U.S. Geological Survey (USGS) conducted a geophysical survey from the east end of East Ship Island, Miss., extending to the middle of Dauphin Island, Ala. (fig. 1). This survey had a dual purpose: (1) to interlink previously conducted nearshore geophysical surveys (shoreline to ~2 km) with those of offshore surveys (~2 to ~9 km) in the area, and (2) to extend the geophysical survey to include a portion of the Dauphin Island nearshore zone. The efforts were part of the USGS Gulf of Mexico Science Coordination partnership with the U.S. Army Corps of Engineers (USACE) to assist the Mississippi Coastal Improvements Program (MsCIP) and the Northern Gulf of Mexico (NGOM) Ecosystem Change and Hazards Susceptibility Project by mapping the shallow geological stratigraphic framework of the Mississippi Barrier Island Complex. These geophysical surveys will provide the data necessary for scientists to define, interpret, and provide baseline bathymetry and seafloor habitat for this area and to aid scientists in predicting future geomorpholocial changes of the islands with respect to climate change, storm impact, and sea-level rise. Furthermore, these data will provide information for barrier island restoration feasibility, particularly in Camille Cut, and efforts for the preservation of historical Fort Massachusetts. For more information refer to http://ngom.usgs.gov/gomsc/mscip/. This report serves as an archive of the processed multibeam bathymetry and side scan sonar (SSS) data. Data products herein include gridded and interpolated digital depth surfaces, seabed surface backscatter imagery, and x,y,z data products for both multibeam bathymetry and side scan sonar imagery. Additional files include trackline maps, navigation files, geograpahic information system (GIS) files, Field Activity Collection System (FACS) logs, and formal Federal Geographic Data Committee (FGDC) metadata. Scanned images of the handwritten FACS logs and digital FACS logs are also provided as PDF files. Refer to the Acronyms page for description of acronyms and abbreviations used in this report or hold the cursor over an acronym for a pop-up explanation. The USGS St. Petersburg Coastal and Marine Science Center assigns a unique identifier to each cruise or field activity. For example, 10CCT03 tells us the data were collected in 2010 for the Coastal Change and Transport (CCT) study and the data were collected during the third (03) field activity for that project in that calendar year. Refer to http://walrus.wr.usgs.gov/infobank/programs/html/definition/activity.html for a detailed description of the method used to assign the field activity ID. Data were collected aboard the U.S. Army Corps of Engineers (USACE) SV Irvington , a 56-foot (ft) Kvichak Marine Industries, Inc., catamaran (fig. 2). Side scan sonar and multibeam bathymetry data were collected simultaneously along the tracklines. The side scan sonar towfish was towed off the starboard side just slightly behind the vessel, close to the seafloor. The multibeam transducer was attached to a retractable strut-arm lowered between the catamaran hulls. Navigation was acquired with an Applanix POS MV and differentially corrected using the broadcast signal from a local National Geodetic Survey (NGS) Continuously Operating Reference Station (CORS) beacon. See the digital FACS equipment log for details about the acquisition equipment used. Raw datasets were stored digitally and processed using HYPACK Inc., HYSWEEP software at the USACE Mobile, Ala., District office. For more information on processing refer to the Equipment and Processing page. Chirp seismic data were also collected during this survey and are archived separately.

Gulf Islands National Seashore

Archive of Side Scan Sonar and Swath Bathymetry Data collected during USGS Cruise 10CCT02 Offshore of Petit Bois Island Including Petit Bois Pass, Gulf Islands National Seashore, Mississippi, March 2010

In March of 2010, the U.S. Geological Survey (USGS) conducted geophysical surveys offshore of Petit Bois Island, Mississippi, and Dauphin Island, Alabama (fig. 1). These efforts were part of the USGS Gulf of Mexico Science Coordination partnership with the U.S. Army Corps of Engineers (USACE) to assist the Mississippi Coastal Improvements Program (MsCIP) and the Northern Gulf of Mexico (NGOM) Ecosystem Change and Hazards Susceptibility Project by mapping the shallow geologic stratigraphic framework of the Mississippi Barrier Island Complex. These geophysical surveys will provide the data necessary for scientists to define, interpret, and provide baseline bathymetry and seafloor habitat for this area and to aid scientists in predicting future geomorphological changes of the islands with respect to climate change, storm impact, and sea-level rise. Furthermore, these data will provide information for barrier island restoration, particularly in Camille Cut, and protection for the historical Fort Massachusetts on Ship Island, Mississippi. For more information please refer to http://ngom.usgs.gov/gomsc/mscip/index.html. This report serves as an archive of the processed swath bathymetry and side scan sonar data (SSS). Data products herein include gridded and interpolated surfaces, seabed backscatter images, and ASCII x,y,z data products for both swath bathymetry and side scan sonar imagery. Additional files include trackline maps, navigation files, GIS files, Field Activity Collection System (FACS) logs, and formal FGDC metadata. Scanned images of the handwritten and digital FACS logs are also provided as PDF files. Refer to the Acronyms page for expansion of acronyms and abbreviations used in this report.

Data Series

Water quality of Lake Pontchartrain and outlets to the Gulf of Mexico following Hurricanes Katrina and Rita: Chapter 7E in Science and the storms-the USGS response to the hurricanes of 2005

Water-quality samples collected from drainage canals, from Lake Pontchartrain, La., and from flood waters contained contaminants typically found in waters influenced by urban runoff. Pesticides and wastewater compounds were detected in all water samples, but none exceeded U.S. Environmental Protection Agency (EPA) drinking water or aquatic life criteria. Although metals were detected in all samples, copper, nickel, and silver occurred in concentrations greater than water-quality criteria for salt water. Salinity levels in the freshwater marshes south of New Orleans were typical of Gulf of Mexico waters for an extended period of time, and levels did not return to prehurricane levels until February 2006.

Circular

USGS Gulf Coast Science Conference and Florida Integrated Science Center Meeting: Proceedings with abstracts, October 20-23, 2008, Orlando, Florida

Welcome! The USGS is the Nation's premier source of information in support of science-based decision making for resource management. We are excited to have the opportunity to bring together a diverse array of USGS scientists, managers, specialists, and others from science centers around the Gulf working on biologic, geologic, and hydrologic issues related to the Gulf of Mexico and the State of Florida. We've organized the meeting around the major themes outlined in the USGS Circular 1309, Facing Tomorrow's Challenges - U.S. Geological Survey Science in the Decade 2007-2017. USGS senior leadership will provide a panel discussion about the Gulf of Mexico and Integrated Science. Capstone talks will summarize major topics and key issues. Interactive poster sessions each evening will provide the opportunity for you to present your results and talk with your peers. We hope that discussions and interactions at this meeting will help USGS scientists working in Florida and the Gulf Coast region find common interests, forge scientific collaborations and chart a direction for the future. We hope that the meeting environment will encourage interaction, innovation and stimulate ideas among the many scientists working throughout the region. We'd like to create a community of practice across disciplines and specialties that will help us address complex scientific and societal issues. Please take advantage of this opportunity to visit with colleagues, get to know new ones, share ideas and brainstorm about future possibilities. It is our pleasure to provide this opportunity. We are glad you're here.

Open-File Report

High-resolution multibeam bathymetry of East and West Flower Gardens and Stetson Banks, Gulf of Mexico

The 1990s have seen rapid advances in seafloor mapping technology. Multibeam sonars are now capable of mapping a wide range of water depths with beams as narrow as 1°, and provide up to a 150° swath. When these multibeam sonars are coupled with an extremely accurate vehicle motion sensor and very precise navigation, they are capable of producing unprecedented images of the seafloor. This technology was used in December 1997 to map the East and West Flower Gardens and Stetson Banks, Gulf of Mexico. The results from this survey provide the most accurate maps of these areas yet produced and reveal features at submeter resolution never mapped in these areas before. The digital data provide a database that should become the fundamental base maps for all subsequent work in this recently established National Marine Sanctuary.

Gulf of Mexico Science