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Aquatic biology in Nederlo Creek, southwestern Wisconsin

This report presents the results of biologic investigations by the U.S. Geological Survey and the Wisconsin Department of Natural Resources during a study of hydrology and water quality in a small drainage basin in the "Driftless Area" of southwest Wisconsin. The investigation included aquatic macrophytes, periphytic and planktonic algae, benthic invertebrates, and trout population dynamics during 1967-78. The aquatic community is diverse and reasonably stable with little indication of environmental disturbance. Aquatic macrophyte population (dominated by Ranunculus aquatilis L., Veronica catenata Penn., and Nasturtium offlcinale) varies little from spring to fall. Periphytic and planktonic algae are predominantly diatoms, with the genus Achnanthes dominating both communities. Most genera of planktonic algae originate in the periphyton, but some true planktonic algae were identified. The benthic invertebrate population is dominated by Trichoptera and is a major food source for trout and forage fish. Biotic index values calculated from benthic invertebrate data indicate that water quality is very good to excellent. The trout population is low and represents only a small part of the total fish population both in biomass and numbers. Brown trout are usually stocked annually in the spring to enhance sport fishing, but by fall most trout are wild. The major environmental factors limiting trout population seem to be insufficient cover, insufficient pool depth and volume, and small spawning areas. The wild trout population is highly dependent on spawning success the previous fall.

Wisconsin↗

Fish communities of benchmark streams in agricultural areas of eastern Wisconsin

Fish communities were surveyed at 20 stream sites in agricultural areas in eastern Wisconsin in 1993 and 1995 as part of the National Water-Quality Assessment (NAWQA) Program. These streams, designated "benchmark streams," were selected for study because of their potential use as regional references for healthy streams in agricultural areas, based on aquatic communities, habitat, and water chemistry. The agricultural benchmark streams were selected from four physical settings, or relatively homogeneous units (RHU's), that differ in bedrock type, texture of surficial deposits, and land use. Additional data were collected along with the fish-community data, including measures of habitat, water chemistry, and population surveys of algae and benthic invertebrates. Of the 20 sites, 19 are classified as trout (salmonid) streams. Fish species that require cold or cool water were the most commonly collected. At least one species of trout was collected at 18 sites, and trout were the most abundant species at 13 sites. The species with the greatest collective abundance, and collected at 18 of the 20 sites, were mottled sculpin (Cottus bairdi), a coldwater species. The next most abundant species were brown trout (Salmo trutta), followed by brook trout (Salvelinusfontinalis), creek chub (Semotilus atromaculatus), and longnose dace (Rhinichthys cataractae). In all, 31 species of fish were collected. The number of species per stream ranged from 2 to 14, and the number of individuals collected ranged from 19 to 264. According to Index of Biotic Integrity (IBI) scores, 5 sites were rated excellent, 10 sites rated good, 4 rated fair, and 1 rated poor. The ratings of the five sites in the fair to poor range were low for various reasons. Two sites appeared to have more warmwater species than was ideal for a high-quality coldwater stream. One was sampled during high flow and the results may not be valid for periods of normal flow; the other may have been populated by migrating warmwater species. Two sites had insufficient deep-water habitat to support large numbers offish, especially top carnivores. Finally, one stream may be too cool to support enough warmwater species and too warm to support trout. In general, two methods of evaluating site habitat indicate that habitat is not a limiting factor for fish communities. However, two sites were rated as fair according to both habitat evaluation methods due to low base flow. Two sites rated below good according to one habitat evaluation method but rated good or excellent according to the other. Detrended correspondence analysis (DCA) of data for 17 sites showed three station groupings. These groupings fell along RHU divisions and each group was associated with one of three trout species. A species-richness gradient was evident on the station-ordination diagram. Intolerant species were associated with each grouping, a reflection of the generally high water quality at the sites. However, no significant differences were found between IBI scores or habitat indices among the site groupings. The DCA axis 1 and 2 scores correlated with average velocity and percent pool as well as RHU factors percent sandy surficial deposits, percent wetland, percent agriculture, and bedrock. Average velocity was highest at three sites which also had among the highest measured flow and largest drainage areas. Percent pool was generally lower at sites with smaller percentages of sandy surficial deposits, with one exception. The usefulness of ordination methods in conjunction with more traditional methods of defining biotic integrity (IB I) has been noted in previous studies. In this study, however, perhaps because of the relative homogeneity of the benchmark streams, the IBI did not correlate with the same kinds of factors as the DCA axis scores did.

Wisconsin↗

Costimulatory receptors in a teleost fish: Typical CD28, elusive CTLA4

T cell activation requires both specific recognition of the peptide-MHC complex by the TCR and additional signals delivered by costimulatory receptors. We have identified rainbow trout sequences similar to CD28 (rbtCD28) and CTLA4 (rbtCTLA4). rbtCD28 and rbtCTLA4 are composed of an extracellular Ig-superfamily V domain, a transmembrane region, and a cytoplasmic tail. The presence of a conserved ligand binding site within the V domain of both molecules suggests that these receptors likely recognize the fish homologues of the B7 family. The mRNA expression pattern of rbtCD28 and rbtCTLA4 in naive trout is reminiscent to that reported in humans and mice, because rbtCTLA4 expression within trout leukocytes was quickly up-regulated following PHA stimulation and virus infection. The cytoplasmic tail of rbtCD28 possesses a typical motif that is conserved in mammalian costimulatory receptors for signaling purposes. A chimeric receptor made of the extracellular domain of human CD28 fused to the cytoplasmic tail of rbtCD28 promoted TCR-induced IL-2 production in a human T cell line, indicating that rbtCD28 is indeed a positive costimulator. The cytoplasmic tail of rbtCTLA4 lacked obvious signaling motifs and accordingly failed to signal when fused to the huCD28 extracellular domain. Interestingly, rbtCTLA4 and rbtCD28 are not positioned on the same chromosome and thus do not belong to a unique costimulatory cluster as in mammals. Finally, our results raise questions about the origin and evolution of positive and negative costimulation in vertebrate immune systems. T cell activation is initiated through complex cell-to-cell interactions. TCRs expressed on the surface of T cells first recognize antigenic peptides presented by MHC molecules on the surface of APCs. TCRs and other surface receptors and ligands stabilize the contact between T cells and APCs, which triggers signal transduction pathways resulting in T cell activation. According to the two-signal model ( 1 , 2 ), T cell activation by Ag requires both specific recognition of the peptide by the TCR (signal 1) and additional signals delivered by other costimulatory receptors (signal 2). Among the known costimulatory receptors, CD28 and CTLA4 (also known as CD152), which are expressed on T cells and bind their corresponding ligands B7-1/B7-2 (CD80/CD86) on APCs, represent a well-studied system in mammals ( 3 ). CD28 is a glycosylated homodimeric protein expressed on the surface of double-positive thymocytes, mature CD4 + T cells, CD11b − CD8 + T cells, and γδ CD3 + T cells ( 4 , 5 ). CD28 is expressed at higher levels on activated T cells than on resting cells ( 6 ). In mammals, CD28 binds to B7-1 and B7-2, which are expressed on the surface of APCs, and delivers a critical costimulatory signal to T lymphocytes. In the absence of CD28 ligation, TCR binding either induces apoptosis or anergy in T cells ( 5 ). Engagement of CD28 alone cannot activate T cells, even if synergetic effects are provided via stimulation by T cell mitogens or anti-CD3 treatment ( 7 ). A tyrosine-based motif in cytoplasmic tail of CD28 functions as a binding site for the p85 PI3K subunit when it is phosphorylated ( 8 , 9 ). Other CD28 intracytoplasmic motifs, which associates with IL-2-inducible tyrosine kinase, lymphocyte-specific tyrosine kinase, and the adaptor growth-factor receptor bound protein-2 are responsible for signal transduction ( 10 , 11 , 12 ). The binding of growth-factor receptor bound protein-2 to CD28 also activates the GTPase RAS ( 13 ). CD28 signaling is also thought to contribute to the mobilization of lipid rafts to the immunological synapse ( 14 ), the region of contact between T cell and APC, which lowers the overall threshold of TCR engagement required for effective cytokine production and proliferation ( 15 ). In contrast, CTLA4 is a powerful negative regulator of T cell activation and was first cloned via differential screening of a cytotoxic T cell cDNA library ( 16 ). CD28 and CTLA4 belong to the same family and share high sequence similarity to each other ( 16 , 17 ). Both receptors interact with B7-1 and/or B7-2 but induce different signals: CD28 amplifies signaling triggered by the TCR-CD3 complex, whereas CTLA4 generates negative signals that inhibit T cell activation ( 18 ). CTLA4 has higher affinity for B7-1 and B7-2 compared with CD28, and its expression is also induced by TCR engagement ( 19 ). The mechanisms of CTLA4-mediated suppression likely involve both competition with CD28 for B7-1/B7-2 binding and potent inhibitory signals delivered by CTLA4 ( 20 ). The inhibitory signaling mechanisms triggered by CTLA4 are not clear. The CTLA4 cytoplasmic tail lacks typical ITIM motifs and shares with CD28 a p85 binding site ( 21 ). Thus, the extent of an immune response is likely controlled through the finely tuned expression of costimulatory receptors from the CD28/CTLA4 family on the surface of activated T cells ( 22 , 23 ). Very little is known about T cell responses and activation in bony fish. TCR-αβ cDNAs ( 24 , 25 , 26 , 27 ) and polymorphic class IA and class IIA/B MHC molecules ( 28 , 29 , 30 ) have been reported in several species, suggesting that the fish TCR recognizes antigenic peptides presented by MHC molecules similar to that of mammals. T cell-mediated responses in fish are supported by several lines of evidence. Allograft rejection provided the first experimental indications suggesting that bony fish possess a functional T cell-mediated immune response ( 31 , 32 ). In vitro assays for allospecific cytotoxicity have also been established using clonal and nonclonal catfish cell lines ( 33 , 34 ) or clonal rainbow trout ( 35 ). Autologous cell-mediated specific lysis of virus-infected syngenic target cells has also been reported in cloned goldfish ( 36 , 37 ). Finally, both public and private T cell-specific expansions have been observed in rainbow trout during secondary immune responses to viral hemorrhagic septicemia virus (VHSV), 3 a fish rhabdovirus, using TCR-β CDR3-length spectratyping ( 38 ). TCR-MHC-peptide interactions induce signaling events through CD3 in mammals and most likely in lower vertebrates because a complete set of CD3 genes, including TCR ζ, CD3 ε, and CD3 γδ, has been found in Pufferfish and Xenopus ( 39 , 40 ). CD8α has been identified in rainbow trout ( 41 ); however, the cytoplasmic tail lacks the consensus p56 lck motif, suggesting that TCR/CD3/CD8-mediated signaling events may be different in teleosts. In this study, we have identified and initially characterized two members of the CD28 family in rainbow trout, rbtCD28 and rbtCTLA4. Their sequence features and expression patterns suggest that they are the likely homologues of mammalian CD28 and CTLA4. The potential costimulatory capacities of these fish receptors were investigated using a human T cell line expressing chimeric receptors composed of the extracellular domain of human CD28 (hCD28) fused to the cytoplasmic tail of rbtCD28 or rbtCTLA4. The chimeric hCD28-rbtCD28 receptor mediated enhanced TCR-induced IL-2 production, suggesting a costimulatory function for rbtCD28. In contrast, the divergent cytoplasmic tail from rbtCTLA4 did not mediate similar signaling activities. This study therefore provides the first characterization of costimulatory receptors in lower vertebrates.

Journal of Immunology↗

Fish assemblage, density, and growth in lateral habitats within natural and regulated sections of Washington's Elwha River prior to dam removal

We characterized seasonal fish assemblage, relative density, and growth in river margins above and between two Elwha River dams scheduled for removal. Fish assemblage and relative density differed in the lateral habitats of the middle-regulated and upper-unregulated sections of the Elwha River. Rainbow trout was the numerically dominant salmonid in both sections, with bull trout present in low numbers. Sculpin were common in the middle section, but not detected in the upper section. In 2004, mean length and biomass of age-0 rainbow trout were significantly smaller in the middle section than in the upper section by the end of the growing season (September). In 2005, an earlier emergence of rainbow trout in the middle section (July) compared to the upper section (August) corresponded with warmer water temperatures in the middle section. Despite lower growth, the margins of mainstem units in the middle section supported higher mean areal densities and biomass of age-0 rainbow trout than the up-per section. These results suggest that growth performance of age-0 rainbow trout was lower in the middle section than in the upper section, which could have been a density-dependent response, or a result of poor food production in the sediment-starved regulated section, or both. Based on our findings, we believe that seasonal sampling of river margins within reference reaches is a cost effective and repeatable method for detection of biologically important short- and long-term changes in emergence timing, density, and growth of rainbow trout before and after dam removals in the Elwha River.

Northwest Science↗

Predicting recolonization patterns and interactions between potamodromous and anadromous salmonids in response to dam removal in the Elwha River, Washington State, USA

The restoration of salmonids in the Elwha River following dam removal will cause interactions between anadromous and potamodromous forms as recolonization occurs in upstream and downstream directions. Anadromous salmonids are expected to recolonize historic habitats, and rainbow trout (Oncorhynchus mykiss) and bull trout (Salvelinus confluentus) isolated above the dams for 90 years are expected to reestablish anadromy. We summarized the distribution and abundance of potamodromous salmonids, determined locations of spawning areas, and mapped natural barriers to fish migration at the watershed scale based on data collected from 1993 to 2006. Rainbow trout were far more abundant than bull trout throughout the watershed and both species were distributed up to river km 71. Spawning locations for bull trout and rainbow trout occurred in areas where we anticipate returning anadromous fish to spawn. Nonnative brook trout were confined to areas between and below the dams, and seasonal velocity barriers are expected to prevent their upstream movements. We hypothesize that the extent of interaction between potamodromous and anadromous salmonids will vary spatially due to natural barriers that will limit upstream-directed recolonization for some species of salmonids. Consequently, most competitive interactions will occur in the main stem and floodplain downstream of river km 25 and in larger tributaries. Understanding future responses of Pacific salmonids after dam removal in the Elwha River depends upon an understanding of existing conditions of the salmonid community upstream of the dams prior to dam removal.

Northwest Science↗

Status of Cisco in Lake Superior in 2017

This report describes the status of fish species and their habitat in Lake Superior during the reporting period of 2012-2016 in response to achievement of fish community objectives (FCOs) established by fishery managers for the lake. The overarching goal for the FCOs continued to be met as the fish community remained diverse, self-regulating, dominated by indigenous species, and able to support sustainable fisheries, although further rehabilitation of certain fish is required. The Lake Superior Lakewide Action and Management Plan classified all habitat indicators for Lake Superior as good. Primary production and zooplankton abundance were stable during the reporting period and unchanged from the two previous reporting periods, indicating the lower food web is healthy. Abundance of the invertebrates Mysis diluviana and Diporeia spp. were stable during the reporting period, and Diporeia spp. density exceeded target levels defined in the Great Lakes Water Quality Agreement. Lake Whitefish (Coregonus clupeaformis) abundance was lower than during the previous reporting period but was within the FCO target. Abundance of lean, siscowet, and humper forms of Lake Trout (Salvelinus namaycush) remained stable at levels seen in previous reporting periods. The FCO for non-indigenous salmonids was met as Chinook Salmon (Oncorhynchus tshawytscha), Coho Salmon (O. kisutch), and steelhead/Rainbow Trout (O. mykiss) were being sustained by natural reproduction, and their abundance remained stable or increased from previous reporting periods. The FCO for Walleye (Sander vitreus) was not met, although populations showed signs of improvement since the previous reporting period. The fish community in littoral areas and embayments continued to be diverse and composed mostly of indigenous species. No new invasive species were found in Lake Superior during the reporting period. Degraded embayment and tributary habitats continued to prevent achievement of the FCOs for Brook Trout (S. fontinalis) and Lake Sturgeon (Acipenser fulvescens). Barriers created for hydroelectric generation either blocked Lake Sturgeon from historically important spawning grounds or reduced stream flows necessary for its reproduction. In tributaries without man-made barriers, Lake Sturgeon was relatively abundant and appeared healthy. Attainment of the FCOs for Brook Trout and Lake Sturgeon will be challenging and can only be attained through development of large-scale management actions like those implemented for Lake Trout rehabilitation and Sea Lamprey (Petromyzon marinus) control. Sea Lamprey-control expenditures doubled in 2016 from past levels and should result in suppression of the population closer to its FCO after 2016. The prey-fish FCO appears to have been met, but biomass of nearly all prey-fish species declined from that reported for the previous reporting period and has been on a downward trajectory since 2000. Predation by Lake Trout is probably to blame for the declining biomass of prey fish. Poor recruitment by Cisco (C. artedi) over the last 15 years is exacerbating the declines in prey-fish biomass because Lake Trout must compensate for the loss of Cisco by consuming other, less-abundant prey fish.

Lake Superior↗

State of Lake Superior ecosystem in 2017

This report describes the status of fish species and their habitat in Lake Superior during the reporting period of 2012-2016 in response to achievement of fish community objectives (FCOs) established by fishery managers for the lake. The overarching goal for the FCOs continued to be met as the fish community remained diverse, self-regulating, dominated by indigenous species, and able to support sustainable fisheries, although further rehabilitation of certain fish is required. The Lake Superior Lakewide Action and Management Plan classified all habitat indicators for Lake Superior as good. Primary production and zooplankton abundance were stable during the reporting period and unchanged from the two previous reporting periods, indicating the lower food web is healthy. Abundance of the invertebrates Mysis diluviana and Diporeia spp. were stable during the reporting period, and Diporeia spp. density exceeded target levels defined in the Great Lakes Water Quality Agreement. Lake Whitefish (Coregonus clupeaformis) abundance was lower than during the previous reporting period but was within the FCO target. Abundance of lean, siscowet, and humper forms of Lake Trout (Salvelinus namaycush) remained stable at levels seen in previous reporting periods. The FCO for non-indigenous salmonids was met as Chinook Salmon (Oncorhynchus tshawytscha), Coho Salmon (O. kisutch), and steelhead/Rainbow Trout (O. mykiss) were being sustained by natural reproduction, and their abundance remained stable or increased from previous reporting periods. The FCO for Walleye (Sander vitreus) was not met, although populations showed signs of improvement since the previous reporting period. The fish community in littoral areas and embayments continued to be diverse and composed mostly of indigenous species. No new invasive species were found in Lake Superior during the reporting period. Degraded embayment and tributary habitats continued to prevent achievement of the FCOs for Brook Trout (S. fontinalis) and Lake Sturgeon (Acipenser fulvescens). Barriers created for hydroelectric generation either blocked Lake Sturgeon from historically important spawning grounds or reduced stream flows necessary for its reproduction. In tributaries without man-made barriers, Lake Sturgeon was relatively abundant and appeared healthy. Attainment of the FCOs for Brook Trout and Lake Sturgeon will be challenging and can only be attained through development of large-scale management actions like those implemented for Lake Trout rehabilitation and Sea Lamprey (Petromyzon marinus) control. Sea Lamprey-control expenditures doubled in 2016 from past levels and should result in suppression of the population closer to its FCO after 2016. The prey-fish FCO appears to have been met, but biomass of nearly all prey-fish species declined from that reported for the previous reporting period and has been on a downward trajectory since 2000. Predation by Lake Trout is probably to blame for the declining biomass of prey fish. Poor recruitment by Cisco (C. artedi) over the last 15 years is exacerbating the declines in prey-fish biomass because Lake Trout must compensate for the loss of Cisco by consuming other, less-abundant prey fish.

Lake Superior↗

Water temperature analysis of the North Branch Au Sable River, Michigan, and implications to salmonid populations

Ambient stream water temperatures affect salmonid movement and survival with fish actively seeking thermal refugia from warming waters. This study sought to investigate the potential role of water temperature in the perceived decline in native Brook Trout Salvelinus fontinalis and non-native Brown Trout Salmo trutta populations in the North Branch Au Sable River by fishers and reported to resource managers in 2018 and 2019. Water temperature was analyzed at nine stations within the North Branch Au Sable River in 2021 and 2022. A total of 61,390 temperature observations were collected with 58.0% exceeding the optimal growth threshold for Brook Trout of 16°C; 37.9% exceeding the movement threshold for Brook Trout of 18°C; 3.4% exceeding the upper limit for positive growth for Brook Trout of 23.4°C; and 28.6% exceeding the optimal growth threshold for Brown Trout of 19°C. The maximum daily water temperatures recorded for each year were 27.58°C in 2021 and 26.89°C in 2022. The availability of cold water thermal refugia is critical to the viability of native Brook Trout populations in the North Branch Au Sable River and its tributaries. Efforts should be taken to increase ambient stream water temperature monitoring year-round and to determine the size, frequency, and availability of thermal refugia within the watershed to increase the likelihood of a system resilient to the impacts of a warming climate.

Michigan↗

Effects of summer air exposure on the survival of caught-and-released salmonids

Despite the success of catch‐and‐release regulations, exposing fish to air during release has emerged as a growing concern over the past two decades. We evaluated the effect of air exposure during midsummer on survival of Yellowstone Cutthroat Trout Oncorhynchus clarkii bouvieri , Bull Trout Salvelinus confluentus , and Rainbow Trout O. mykiss exposed to catch‐and‐release angling. Fish were sampled by angling on Palisades Creek (August 2016), Sawmill Creek, and the Main Fork of the Little Lost River, Idaho (July−August 2017). After capture, fish were kept underwater while they were measured and individually tagged. Anglers, in groups of two to four, caught study fish and gave them an air exposure treatment of 0, 30, or 60 s. Single‐pass backpack electrofishing was then used to recapture tagged fish and estimate relative survival. In total, 328 Yellowstone Cutthroat Trout were sampled (0 s: n = 110; 30 s: n = 110; 60 s: n = 108), 278 Bull Trout (0 s: n = 92; 30 s: n = 94; 60 s: n = 92), and 322 Rainbow Trout (0 s: n = 103; 30 s: n = 106; 60 s: n = 113). The majority of fish were caught using artificial flies (≥92%) and were hooked in the corner of the mouth, lower jaw, or upper jaw (≥78%) in all three species. No difference in survival was observed among air exposure treatments for all three species. Results from the present study along with those from prior field studies of air exposure times during angling suggest that mortality from exposing fish to air for ≤60 s is not likely a population‐level concern in catch‐and‐release fisheries for these species.

Idaho↗

Abiotic & biotic responses of the Colorado River to controlled floods at Glen Canyon Dam, Arizona, USA

Closure of Glen Canyon Dam reduced sand supply to the Colorado River in Grand Canyon National Park by about 94% while its operation has also eroded the park's sandbar habitats. Three controlled floods released from the dam since 1995 suggest that sandbars might be rebuilt and maintained, but only if repeated floods are timed to follow tributary sand deliveries below the dam. Monitoring data show that sandbars are dynamic and that their erosion after bar building is positively related with mean daily discharge and negatively related with tributary sand production after controlled floods. The March 2008 flood affected non-native rainbow trout abundance in the Lees Ferry tailwater, which supports a blue ribbon fishery. Downstream trout dispersal from the tailwater results in negative competitive interactions and predation on endangered humpback chub. Early survival rates of age-0 trout increased more than fourfold following the 2008 flood, and twofold in 2009, relative to prior years (2006-2007). Hatch-date analysis indicated that early survival rates were much higher for cohorts that emerged about 2 months after the 2008 flood relative to cohorts that emerged earlier that year. The 2009 survival data suggest that tailwater habitat improvements persisted for at least a year, but apparently decreased in 2010. Increased early survival rates for trout coincided with the increased availability of higher quality drifting food items after the 2008 flood owing to an increase in midges and black flies, preferred food items of rainbow trout. Repeated floods from the dam might sustainably rebuild and maintain sandbars if released when new tributary sand is available below the tailwater. Spring flooding might also sustain increased trout abundance and benefit the tailwater fishery, but also be a potential risk to humpback chub in Grand Canyon.

Arizona;Nevada;Utah↗

A comparative examination of cortisol effects on muscle myostatin and HSP90 gene expression in salmonids

Cortisol, the primary corticosteroid in teleost fishes, is released in response to stressors to elicit local functions, however little is understood regarding muscle-specific responses to cortisol in these fishes. In mammals, glucocorticoids strongly regulate the muscle growth inhibitor, myostatin, via glucocorticoid response elements (GREs) leading to muscle atrophy. Bioinformatics methods suggest that this regulatory mechanism is conserved among vertebrates, however recent evidence suggests some fishes exhibit divergent regulation. Therefore, the aim of this study was to evaluate the conserved actions of cortisol on myostatin and hsp90 expression to determine if variations in cortisol interactions have emerged in salmonid species. Representative salmonids; Chinook salmon (Oncorhynchus tshawytscha), cutthroat trout (Oncorhynchus clarki), brook trout (Salvelinus fontinalis), and Atlantic salmon (Salmo salar); were injected intraperitoneally with a cortisol implant (50 lg/g body weight) and muscle gene expression was quantified after 48 h. Plasma glucose and cortisol levels were significantly elevated by cortisol in all species, demonstrating physiological effectiveness of the treatment. HSP90 mRNA levels were elevated by cortisol in brook trout, Chinook salmon, and Atlantic salmon, but were decreased in cutthroat trout. Myostatin mRNA levels were affected in a species, tissue (muscle type), and paralog specific manner. Cortisol treatment increased myostatin expression in brook trout (Salvelinus) and Atlantic salmon (Salmo), but not in Chinook salmon (Oncorhynchus) or cutthroat trout (Oncorhynchus). Interestingly, the VC alone increased myostatin mRNA expression in Chinook and Atlantic salmon, while the addition of cortisol blocked the response. Taken together, these results suggest that cortisol affects muscle-specific gene expression in species-specific manners, with unique Oncorhynchus-specific divergence observed, that are not predictive solely based upon mammalian stress responses.

General and Comparative Endocrinology↗

Effects of activity and energy budget balancing algorithm on laboratory performance of a fish bioenergetics model

We evaluated the performance of the Wisconsin bioenergetics model for lake trout Salvelinus namaycush that were fed ad libitum in laboratory tanks under regimes of low activity and high activity. In addition, we compared model performance under two different model algorithms: (1) balancing the lake trout energy budget on day t based on lake trout energy density on day t and (2) balancing the lake trout energy budget on day t based on lake trout energy density on day t + 1. Results indicated that the model significantly underestimated consumption for both inactive and active lake trout when algorithm 1 was used and that the degree of underestimation was similar for the two activity levels. In contrast, model performance substantially improved when using algorithm 2, as no detectable bias was found in model predictions of consumption for inactive fish and only a slight degree of overestimation was detected for active fish. The energy budget was accurately balanced by using algorithm 2 but not by using algorithm 1. Based on the results of this study, we recommend the use of algorithm 2 to estimate food consumption by fish in the field. Our study results highlight the importance of accurately accounting for changes in fish energy density when balancing the energy budget; furthermore, these results have implications for the science of evaluating fish bioenergetics model performance and for more accurate estimation of food consumption by fish in the field when fish energy density undergoes relatively rapid changes.

Transactions of the American Fisheries Society↗

Modeling prey consumption by native and non-native piscivorous fishes: implications for competition and impacts on shared prey in an ultraoligotrophic lake in Patagonia

We examined trophic interactions of the nonnative salmonids Rainbow Trout Oncorhynchus mykiss, Brown Trout Salmo trutta, and Brook Trout Salvelinus fontinalisand the main native predator Creole Perch Percichthys trucha in Lake Nahuel Huapi (Patagonia, Argentina) to determine the relative impact of each predator on their forage base and to evaluate the potential vulnerability of each predator to competitive impacts by the others. Using bioenergetics simulations, we demonstrated the overall importance of galaxiids and decapods to the energy budgets of nonnative salmonids and Creole Perch. Introduced salmonids, especially Rainbow Trout, exerted considerably heavier predatory demands on shared resources than did the native Creole Perch on both a per capita basis and in terms of relative population impacts. Rainbow Trout consumed higher quantities and a wider size range of Small Puyen (also known as Inanga) Galaxias maculatus than the other predators, including early pelagic life stages of that prey; as such, this represents an additional source of mortality for the vulnerable early life stages of Small Puyen before and during their transition from pelagic to benthic habitats. All predators were generally feeding at high feeding rates (above 40% of their maximum physiological rates), suggesting that competition for prey does not currently limit either Creole Perch or the salmonids in this lake. This study highlights the importance of keystone prey for the coexistence of native species with nonnative top predators. It provides new quantitative and qualitative evidence of the high predation pressure exerted on Small Puyen, the keystone prey species, during the larval to juvenile transition from pelagic to littoral-benthic habitat in Patagonian lakes. This study also emphasizes the importance of monitoring salmonid and Creole Perch population dynamics in order to detect signs of potential impacts through competition and shows the need to carefully consider the rationale behind any additional trout stocking.

Transactions of the American Fisheries Society↗

Response of nutrient limitation to invasive fish suppression: How carcasses and analog pellets alter periphyton

The native Yellowstone Cutthroat Trout ( Oncorhynchus clarkii bouvieri Jordan and Gilbert, 1883) population in Yellowstone Lake, Yellowstone National Park, Wyoming, USA, is in decline because of competition from the introduced, invasive Lake Trout ( Salvelinus namaycush Walbaum in Artedi, 1792). Gillnetting is used to suppress adult Lake Trout; however, methods are being developed to suppress embryos, including adding Lake Trout carcasses and carcass-analog pellets to spawning sites. Decomposing carcasses and analog pellets cause decreased dissolved oxygen concentrations thereby leading to Lake Trout embryo mortality, but the effects of these methods on primary producers are unknown. We deployed in-situ nutrient diffusing substrates (NDS) at 3 spawning sites. The 1 st site was treated with carcasses, the 2 nd site was treated with analog pellets, and a 3 rd lacked treatment (control). To estimate how suppression measures may alter nutrient limitation, we measured algal biomass in 6 NDS amendments at each site: nothing (control), N, P, N + P, ground carcasses, or pulverized analog pellets. We deployed 5 replicates of each amendment at each site before and after treating whole sites. N and P co-limited periphyton before carcasses or analog pellets were added to spawning sites ( p < 0.01); however, nutrients were not limiting after the treatments were added to spawning sites ( p = 0.31–1). Algal biomass was 4× higher after whole-site carcass treatments. In contrast, analog pellets appeared to suppress algal biomass in the amendments (20% of NDS at the control site post-treatment) and in the treatment plot (33% of pre-treatment biomass at analog pellet site). We also measured how individual ingredients in analog pellets altered periphyton biomass, which suggested that vitamin E, estrogen, and soybean oil ingredients reduced the growth of primary producers. Suppression methods may stimulate or reduce algal biomass, depending on the methods used, which could have cascading effects on food webs and potentially reduce the success of the control measures. Estimating how different Lake Trout suppression methods may alter basal resources in the littoral zone of Yellowstone Lake will help natural resource agencies develop effective plans to control invasive predators at early life stages while minimally altering ecosystems.

Wyoming↗

A riverscape perspective of Pacific salmonids and aquatic habitats prior to large-scale dam removal in the Elwha River, Washington, USA

Dam removal has been increasingly proposed as a river restoration technique. In 2011, two large hydroelectric dams will be removed from Washington State&rsquo;s Elwha River. Ten anadromous fish populations are expected to recolonise historical habitats after dam removal. A key to understanding watershed recolonisation is the collection of spatially continuous information on fish and aquatic habitats. A riverscape approach with an emphasis on biological data has rarely been applied in mid-sized, wilderness rivers, particularly in consecutive years prior to dam removal. Concurrent snorkel and habitat surveys were conducted from the headwaters to the mouth (rkm 65&ndash;0) of the Elwha River in 2007 and 2008. This riverscape approach characterised the spatial extent, assemblage structure and patterns of relative density of Pacific salmonids. The presence of dams influenced the longitudinal patterns of fish assemblages, and species richness was the highest downstream of the dams, where anadromous salmonids still have access. The percent composition of salmonids was similar in both years for rainbow trout, Oncorhynchus mykiss (Walbaum), coastal cutthroat trout, Oncorhynchus clarkii clarkii (Richardson) (89%; 88%), Chinook salmon, Oncorhynchus tshawytscha (Walbaum) (8%; 9%), and bull trout, Salvelinus confluentus (Suckley) (3% in both years). Spatial patterns of abundance for rainbow and cutthroat trout ( r = 0.76) and bull trout ( r = 0.70) were also consistent between years. Multivariate and univariate methods detected differences in habitat structure along the river profile caused by natural and anthropogenic factors. The riverscape view highlighted species-specific biological hotspots and revealed that 60&ndash;69% of federally threatened bull trout occurred near or below the dams. Spatially continuous surveys will be vital in evaluating the effectiveness of upcoming dam removal projects at restoring anadromous salmonids.

Washington↗

Life-history variation of two inland salmonids revealed through otolith microchemistry analysis

Increasingly, otolith microchemistry analysis is used as a tool to trace fish migrations, especially migrations of diadromous fishes. Yet, few studies have used otolith microchemistry to trace migrations in small inland watersheds, leaving major knowledge gaps in our understanding of inland fish spatial ecology. Here, we evaluate the use of tributary habitat for spawning and describe and compare fluvial brown trout ( Salmo trutta ) and rainbow trout ( Oncorhynchus mykiss ) natal origin distribution, time spent in natal streams, and spawning site fidelity. 63% of rainbow trout and 57% of brown trout migrated after hatching. Brown trout showed greater variation in time spent in natal tributaries, suggesting that individuals are temporally distributing risk among offspring. By contrast, rainbow trout showed greater variation in natal origin, suggesting that individuals are spatially distributing risk among offspring. Our results indicate there is high inter- and intraspecific migration variation in inland salmonid populations, which may be linked to access to a mosaic of spawning and rearing habitat types.

Colorado, Wyoming↗

Spatiotemporal patterns in trophic niche overlap among five salmonines in Lake Michigan, USA

Native lake trout and introduced Chinook salmon, coho salmon, steelhead, and brown trout are major predators in Lake Michigan’s complex ecosystem and collectively support a valuable recreational fishery, but declines in their primary prey, alewife, have raised ecological and management concerns about competition and prey allocation. We applied niche overlap analysis to evaluate competition among salmonine predators during rapid forage base change in Lake Michigan. δ13C and δ15N stable isotope ratios indicated that lake trout had a unique trophic niche from inclusion of offshore and benthic prey, with <29% lakewide niche overlap with Chinook salmon, coho salmon and steelhead. Brown trout had moderate overlap with other species (45 – 91%), while Chinook salmon, coho salmon, and steelhead had high overlap (71 – 98%). Regional differences in isotopic signatures highlighted the potential importance of sub-system differences in fish diets in large aquatic systems. The uniqueness of the lake trout niche, and broadness of brown trout and steelhead niches, suggest these species may be resilient to forage base changes. This study demonstrates how niche overlap analysis can be applied to tease apart competitive interactions and their response to ecosystem change.

Lake Michigan↗

Conflicts among protected native birds and valuable sport fishes: Potential pelican predation effects

Reservoirs are examples of novel ecosystems that have developed into popular sport fisheries; these systems are also becoming seasonal refuges for migratory birds, including the piscivorous American white pelican ( Pelecanus erythrorhynchos ). We (1) investigated the proportion of cutthroat trout ( Oncorhynchus clarkii utah ) and other species consumed by pelicans, (2) compared whether pelicans have an adverse effect on cutthroat trout spawning movement, and (3) determined the importance of pelican predation relative to other sources of fish mortality in Strawberry Reservoir, Utah, USA. Pelican diet samples consisted of >85% Utah sucker ( Catostomus ardens ), 6% Utah chub ( Gila atraria ), and 3% cutthroat trout. Based on bioenergetics, we estimated that pelicans consumed 384–3020 individual cutthroat trout (0.17%–1.3% of population), in contrast to 14 166–27 196 nongame sucker and chub. Bird-related mortality rate ranged from 1% to 6% for stocked, PIT (passive integrated transponder)-tagged adult cutthroat trout and from 4% to 16% for subadult cutthroat trout. Based on these results, any management action taken to control pelican predation would need to be weighed against the benefits of nongame fish removal and the protected status of pelicans.

Utah↗