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At least 1,621 records · Page 90Linked to original sources
USGS2004

Effects of nutrient enrichment on the decomposition of wood and associated microbial activity in streams

1. We determined the effects of nutrient enrichment on wood decomposition rates and microbial activity during a 3-year study in two headwater streams at Coweeta Hydrologic Laboratory, NC, U.S.A. After a 1-year pretreatment period, one of the streams was continuously enriched with inorganic nutrients (nitrogen and phosphorus) for 2 years while the other stream served as a reference. We determined the effects of enrichment on both wood veneers and sticks, which have similar carbon quality but differ in physical characteristics (e.g. surface area to volume ratios, presence of bark) that potentially affect microbial colonisation and activity. 2. Oak wood veneers (0.5 mm thick) were placed in streams monthly and allowed to decompose for approximately 90 days. Nutrient addition stimulated ash-free dry mass loss and increased mean nitrogen content, fungal biomass and microbial respiration on veneers in the treatment stream compared with the reference. The magnitude of the response to enrichment was great, with mass loss 6.1 times, and per cent N, fungal biomass and microbial respiration approximately four times greater in the treatment versus reference stream. 3. Decomposition rate and nitrogen content of maple sticks (ca. 1-2 cm diameter) also increased; however, the effect was less pronounced than for veneers. Wood response overall was greater than that determined for leaves in a comparable study, supporting the hypothesis that response to enrichment may be greater for lower quality organic matter (high C:N) than for higher quality (low C:N) substrates. 4. Our results show that moderate nutrient enrichment can profoundly affect decomposition rate and microbial activity on wood in streams. Thus, the timing and availability of wood that provides retention, structure, attachment sites and food in stream ecosystems may be affected by nutrient concentrations raised by human activities.

Freshwater Biology↗
USGS1996

Soil and soil solution chemistry under red spruce stands across the northeastern united states

Red spruce ecosystems in the northeastern United States are of interest because this species is undergoing regional decline. Their underlying soils have been examined closely at only a few sites, and information available on red spruce soils throughout this region is limited.This study was conducted to examine soil and soil solution chemistry at red spruce sites in the northeastern US that encompass the range of soil conditions in which red spruce grow. Soils and soil solutions from Oa and B horizons were obtained over a 2-year period from 12 undisturbed red spruce forests (elevations of 80-975 m) in New York, Vermont, New Hampshire, and Maine. All sites had extremely acid Spodosols (Oa soil pH range 2.56 to 3.11 in 0.01 M CaCl2), with generally low concentrations of base cations and high concentrations of Al on soil exchange sites. There was considerable range in exchange chemistry across the sites, however, with exchangeable Ca in Oa horizons ranging from 2.1 to 21.6 cmolckg-1 and exchangeable Al from 3.6 to 18.3 cmolckg-1. Solution chemistry had high concentrations of DOC in the Oa horizons (1160-15200 ??mol L-1), with higher concentrations in the fall than in the spring, which was probably a reflection of fresh litter inputs. Despite high concentrations of DOC in all solutions, inorganic Al was found in some Oa solutions at concentrations as high as 26 ??mol L-1. Ratios of Ca2+ to inorganic Al concentraturns were less than 1.0 in the Oa horizon of one site, and were well below 1.0 in B horizons of all sites. That soil chemistry was related to soil solution chemistry was demonstrated by solution Al concentrations in the forest floor having significant relationships with pyrophosphate extractable Al, although it was not related in the B horizon. Soil exchangeable Ca/Al ratios in the Oa horizon explained 75% of the variation in solution Ca2+/inorganic Al ratios when mean values were used for each site. Our studies have expanded the range of soil chemical conditions measured for red spruce soils. By characterizing the regional variability, these results will enable site intensive process studies to be better applied to regional problems such as spruce decline.

Soil Science↗
USGS2001

Rehabilitation of gypsum-mined lands in the Indian desert

The economic importance of mining in the Indian Desert is second only to agriculture. Land disturbed by mining, however, has only recently been the focus of rehabilitation efforts. This research assesses the success of rehabilitation plans used to revegetate gypsum mine spoils within the environmental constraints of the north-west Indian hot-desert ecosystem. The rehabilitation plan first examined both mined and unmined areas and established assessments of existing vegetative cover and the quality of native soils and mine spoils. Tests were made on the effect of the use, and conservation, of available water through rainwater harvesting, amendment application (for physical and chemical spoil modification), plant establishment protocols, and the selection of appropriate germ plasm. Our results show that the resulting vegetative cover is capable of perpetuating itself under natural conditions while concurrently meeting the needs of farmers. Although the mine spoils are deficient in organic matter and phosphorus, they possess adequate amounts of all other nutrients. Total boron concentrations (>5.0 mg kg-1) in both the topsail and mine spoil indicate potentially phytotoxic conditions. Electrical conductance of mine spoil is 6-10 times higher than for topsail with a near-neutral pH. Populations of spoil fungi, Azotobactor, and nitrifying bacteria are low. The soil moisture storage in rainwater harvesting plots increased by 8% over the control and 48% over the unmined area. As a result of rehabilitation efforts, mine spoils show a steady buildup in organic carbon, and P and K due to the decomposition of farmyard manure and the contribution of nitrogen fixation by the established leguminous plant species. The rehabilitation protocol used at the site appears to have been successful. Following revegetation of the area with a mixture of trees, shrubs, and grasses, native implanted species have become established. Species diversity, measured in terms of species richness, increased after one year and then gradually declined over time; the decline was the result of the loss of annual species. The study not only develops methods of gypsum mine land rehabilitation but also helps in understanding processes of rehabilitation success in arid regions and emphasizes the importance of long-term monitoring of rehabilitation success. Copyright ?? 2001 Taylor & Francis.

Arid Soil Research and Rehabilitation↗
USGS2010

A summary of information on the rust Puccinia psidii Winter (guava rust) with emphasis on means to prevent introduction of additional strains to Hawaii

The neotropical rust fungus Puccinia psidii ( P. psidii ) was originally described from the host common guava in its native Brazil but has been found since on hosts throughout the myrtle family (Myrtaceae), including a dramatic host jump to nonnative Eucalyptus plantations. Most rust fungi are able to live only on a very narrow range of host species. P. psidii is unusual both for having a broad host range and for the intensity of its damage to susceptible young growth. This rust first got a foothold in the United States in Florida more than three decades ago. The U.S. Department of Agriculture (USDA) has since considered it a nonactionable, nonreportable pest. Hawaii and Florida are the only two states with native species in the myrtle family. Over a period of 30 years, this rust has done little damage to any of the scattered native Myrtaceae in Florida, although the host range of the rust has gradually grown to about 30 mostly nonnative species in the family, apparently because of increasing genetic variety of the rust by repeated introductions. However, Florida’s native Myrtaceae are among the roughly 1,100 neotropical species that are largely resistant to P. psidii . The 3,000 species of non-neotropical Myrtaceae of the Pacific, Australia, Asia, and Africa are expected to prove much more vulnerable to P. psidii . Little is known about the genetics or genetic strains of P. psidii , although existing literature shows that there are numerous strains that have differential ability to infect suites of host plants. The rust was first recorded in the state of Hawaii on Oahu in April 2005 and quickly spread throughout the Hawaiian Islands. The main concern in Hawaii became the potential threat to ohia, Metrosideros polymorpha (Myrtaceae), the endemic forest tree species overwhelmingly important in Hawaii’s nature and culture. The potential ecological consequences of a virulent strain of rust on ohia forests are immense, due to its role as a foundation tree species and the diversity of niches it fills in Hawaii. A single genetic strain of the rust is established in Hawaii, apparently composed of a single genotype lacking sexual reproduction. P. psidii has been found statewide in Hawaii attacking Myrtaceae from near sea level to about 1,200 m elevation in areas with rainfall ranging from 750–5,000 mm. Five of eight native Myrtaceae and at least 15 nonnative species have been observed as hosts of P. psidii in Hawaii. The federally endangered Eugenia koolauensis (nioi) and the nonendangered indigenous species Eugenia reinwardtiana are severely damaged. The introduced (an Asian species) and invasive rose apple, Syzygium jambos , is severely affected at a landscape scale, with widespread crown dieback and many instances of complete tree death. In spite of billions of wind-dispersed rust spores produced from rose apple infestations during 2006 to 2008, adjacent ohia have been little affected to date by the rust strain in Hawaii. Within the elevation range of the rust, P. psidii is found on less than 5 percent of the ohia trees in the wild; on those ohia trees on which the rust is found, it is normally found on less than 5 percent of the leaves. The strain in Hawaii has not attacked many of the species known to be infected by the rust elsewhere, including common guava. On the basis of the very substantial genetic diversity of the much-studied, crop-damaging species of the genus Puccinia , there is good reason to believe that there are at minimum dozens and likely hundreds or thousands of genotypes of P. psidii , likely concentrated in the core range in Brazil but with potential for dispersal by globalization. Multiple genotypes are believed already present in the United States and certain to spread freely in the absence of restrictions. The U.S. Forest Service has initiated a major collaborative project in Brazil to investigate the genetics of susceptibility of Hawaii’s ohia to P. psidii , but initial results will likely not be available for several years. If just one more strain reaches Hawaii, the consequences could be dire for ohia, with each new genotype arriving having an unknown likelihood of increasing damage to ohia; possibilities for mutation and (or) genetic mixing, even with asexual strains, are apparently substantial, based on what is known about other Puccinia species. Investigations are needed to clarify rust-nioi relationships. However, it is likely that keeping out new strains of P. psidii may be important for long-term survival of nioi as well as for the health of ohia forest. The source of Hawaii’s initial invasion by P. psidii is uncertain but is strongly suspected to have been decorative foliage of species in the myrtle family from the mainland United States, most likely California, where there had been outbreaks of this rust on cultivated myrtle in 2005. In 2006–7, Maui’s Hawaii Department of Agriculture (HDOA) inspectors intercepted several P. psidii infected shipments of foliage myrtle, shipped from several California counties. Recognizing the huge threat of the rust to Hawaii’s one million acres of ohia forests, and consequently to Hawaii’s watersheds and biodiversity, Hawaii’s Board of Agriculture unanimously approved an interim rule in August 2007 banning importation of plants in the myrtle family from “infested areas,” specified as South America, Florida, and California. However, the interim rule has not been made permanent by HDOA, and the department has stated that it needs further information to formulate a long-term rule that imposes appropriate measures. Rust spores can survive for 2 to 3 months, and the pathogen can be transported to Hawaii on Myrtaceae from anywhere in the world through the United States mainland. There is much geographic reshuffling of flowers and foliage among the far-flung firms in the trade, especially for bouquet making. Because P. psidii is a nonactionable and nonreportable pest in the United States, foliage and flowers of the myrtle family can move freely into the country (usually but not necessarily always through the ports of Miami or Los Angeles), and from state to state. Currently, the State of Hawaii regulates incoming plant material in the family Myrtaceae by visual inspection. Inspection capacity and latent (asymptomatic) infections limit the ability to detect the rust. New molecular tests could improve detection efficiency, but the cost and the time required to process samples currently precludes their routine use in ports of entry. Interdiction, which has effectively kept coffee rust ( Hemileia vastatrix ) out of Hawaii for 120 years, offers the strongest protection for Hawaii’s native ecosystems from P. psidii . Interdiction of Myrtaceae from the continental United States could have the important supplementary benefit of preventing establishment in Hawaii of other very significant pests of multiple species of Myrtaceae that are already in the country, including: the Eugenia psyllid Trioza eugeniae (Hemiptera: Psyllidae); Chrysophtharta m-fuscum , the Eucalyptus tortoise beetle (Coleoptera: Chrysomelidae); Leptocybe invasa , the blue gum chalcid wasp (Hymenoptera: Chalcidae); and the fungal pathogens Mycosphaerella molleriana (Ascomycota: Mycosphaerelliaceae, crinkle leaf disease of Eucalyptus spp.) and Neofusicoccum parvum (Ascomycota: Botryosphaeriaceae), currently causing serious damage to Syzygium paniculatum in south Florida nurseries. Each of these pests would be likely to cause very significant damage to native and (or) cultivated Myrtaceae in Hawaii. Each of these pests is a prime candidate for transport by the foliage and (or) nursery stock pathways from Florida and California into Hawaii. Hawaii Department of Agriculture has a clear mandate to protect Hawaii’s natural environment, forestry and cultivated Myrtaceae. Principles of the World Trade Organization’s Treaty on Sanitary and Phytosanitary Measures and the International Plant Protection Convention are consistent with the right of Hawaii to take action. The current threat of P. psidii and the other five serious threats to Myrtaceae are primarily posed by the importation of infected plants from the continental United States; however, that may change in the future. If Hawaii were to decide to take a stand (through State regulation) to protect its native and introduced Myrtaceae, there is a possibility that USDA would consider Federal regulation of Myrtaceae from foreign countries.

Hawaii↗
USGS2016

Quantifying seepage using heat as a tracer in selected irrigation canals, Walker River Basin, Nevada, 2012 and 2013

The Walker River is an important source of water for western Nevada. The river provides water for agriculture and recharge to local aquifers used by several communities. Farmers began diverting water from the Walker River in the 1860s to support growing agricultural development. Over time, the reduced inflows into Walker Lake from upstream reservoirs and diversions have resulted in 170 feet of lake level decline and increased dissolved-solids concentrations to levels that threaten aquatic ecosystems, including survival of Lahonton cutthroat trout, a native species listed in the Endangered Species Act. Investigations of the water-budget components in the Walker River Basin have revealed uncertainty in the recharge to aquifers from irrigation canals. To address this need, the U.S. Geological Survey conducted an extensive field study from March 2012 through October 2013 to quantify seepage losses in selected canals in the Smith Valley, Mason Valley, and Walker Lake Valley irrigation areas. The seepage rates estimated for the 2012 and 2013 irrigation seasons in the Smith Valley transect sites (Saroni and Plymouth canals) ranged between 0.01 to 2.5 feet per day (ft/d) (0.01 to 0.68 cubic feet per second per mile [ ft 3 /s-mi ]). From 2012 to 2013, the average number of days the canals had flowing water decreased from 190 to 125 due to drier climate and lack of water available for diversion from the Walker River. The nearly 50-percent reductions in volumetric loss rates between 2012 and 2013 were associated with less than average diversions into canals from the Walker River and reductions in infiltration rates following routine canal maintenance. Models developed for the Saroni canal in 2012 were recalibrated in 2013 to evaluate changes in seepage as a result of siltation. Just prior to the 2012 irrigation season, nearly the entire length of the canal was cleared of vegetation and debris to improve flow conveyance. In 2013, following the first year of maintenance, a 90-percent reduction in seepage was observed at one of the transect sites. The removal of sediment-clogged layers during canal maintenance may have more profound effects on seepage rates beyond what was observed at the transect sites. The seepage rates for the Saroni canal in 2012 ranged from 0.02 to 1.6 ft/d (0.03 to 0.4 ft 3 /s-mi ). The total seepage loss in the Saroni canal for the 2012 and 2013 irrigation seasons was estimated to be 1,100 and 590 acre-feet (acre-ft), respectively. Seepage rates on the Plymouth canal in Smith Valley in 2012 were among the lowest, ranging from 0.01 to 0.2 ft/d (0.01 to 0.1 ft 3 /s-mi ). In 2013, the seepage rate on the Plymouth canal was similar to 2012; however, the volumetric loss was reduced by 50 percent due to the 50-percent reduction in number of canal flow days. Lower rates of seepage on the Plymouth canal for the 2012 and 2013 irrigation seasons were estimated to be 210 and 130 acre-ft, respectively. The seepage rates estimated for the 2012 and 2013 irrigation seasons in the Mason Valley transect sites (Fox, Mickey, and Campbell ditches) ranged from 0.1 to 3.3 ft/d (0.2 to 1.3 ft 3 /s-mi ). The influence of water-table declines on seepage was observed at the Mickey and Campbell ditches. In 2012, the estimated seepage on the Mickey ditch was 1.6 ft/d during a period when the water-table altitude was at or above the canal altitude. Following extensive declines in the water table, the hydraulic gradient increased between the canal and the shallow aquifer, thereby increasing the seepage rates to 3.2 ft/d in 2013. During the period of hydraulic disconnection, seepage rates increased to 9.5 ft/d during intermittent periods of canal flow. For the Mickey ditch, the seepage loss in 2013 was 1.5 times the rate estimated in 2012 despite the canal having 45 days less flow. Similarly, the Campbell ditch seepage loss increased slightly from 660 to 700 acre-ft, a factor of 1.1, with 49 days less flow. The seepage loss for the Fox ditch did not exhibit significant year to year variability. The annual seepage loss estimated for 2012 and 2013 in the Fox ditch was 2,100 and 2,200 acre-ft, respectively. The seepage rates estimated for the 2013 irrigation season in the Walker Lake Valley transect sites (Schurz Lateral Canals 1A and 2A, and Canal 2) ranged from 0.7 to 0.9 ft/d (0.4 to 1.3 ft 3 /s-mi ). In Walker Lake Valley, diversions into Lateral Canals 1A and 2A during the 2013 irrigation season were highly intermittent, a characteristic common of lateral diversions. The annual estimated seepage loss in Walker Lake Valley ranged between 50 and 725 acre-ft among the transect sites.

California, Nevada↗
USGS2024

Application of normalized radar backscatter and hyperspectral data to augment rangeland vegetation fractional classification

Rangeland ecosystems in the western United States are vulnerable to climate change, fire, and anthropogenic disturbances, yet classification of rangeland areas remains difficult due to frequently sparse vegetation canopies that increase the influence of soils and senesced vegetation, the overall abundance of senesced vegetation, heterogeneity of life forms, and limited ground-based data. The Rangeland Condition Monitoring Assessment and Projection (RCMAP) project provides fractional vegetation cover maps across western North America using Landsat imagery and artificial intelligence from 1985 to 2023 at yearly time-steps. The objectives of this case study are to apply hyperspectral data from several new data streams, including Sentinel Synthetic Aperture Radar (SAR) and Earth Surface Mineral Dust Source Investigation (EMIT), to the RCMAP model . We run a series of five tests (Landsat-base model, base + SAR, base + EMIT, base + SAR + EMIT, and base + Landsat NEXT [LNEXT] synthesized from EMIT) over a difficult-to-classify region centered in southwest Montana, USA. Our testing results indicate a clear accuracy benefit of adding SAR and EMIT data to the RCMAP model, with a 7.5% and 29% relative increase in independent accuracy ( R 2 ), respectively. The ability of SAR data to observe vegetation height allows for more accurate classification of vegetation types, whereas EMIT’s continuous characterization of the spectral response boosts discriminatory power relative to multispectral data. Our spectral profile analysis reveals the enhanced classification power with EMIT is related to both the improved spectral resolution and representation of the entire domain as compared to legacy Landsat. One key finding is that legacy Landsat bands largely miss portions of the electromagnetic spectrum where separation among important rangeland targets exists, namely in the 900–1250 nm and 1500–1780 nm range. Synthesized LNEXT data include these gaps, but the reduced spectral resolution compared to EMIT results in an intermediate 18% increase in accuracy relative to the base run. Here, we show the promise of enhanced classification accuracy using EMIT data, and to a smaller extent, SAR.

Idaho, Montana, Wyoming↗
USGS2002

Measurement of the bed material of gravel-bed rivers

The measurement of the physical properties of a gravel-bed river is important in the calculation of sediment transport and physical habitat values for aquatic animals. These properties are not always easy to measure. One recent report on flushing of fines from the Klamath River did not contain information on one location because the grain size distribution of the armour could not be measured on a dry river bar. The grain size distribution could have been measured using a barrel sampler and converting the measurements to the same as would have been measured if a dry bar existed at the site. In another recent paper the porosity was calculated from an average value relation from the literature. The results of that paper may be sensitive to the actual value of porosity. Using the bulk density sampling technique based on a water displacement process presented in this paper the porosity could have been calculated from the measured bulk density. The principle topics of this paper are the measurement of the size distribution of the armour, and measurement of the porosity of the substrate. The 'standard' method of sampling of the armour is to do a Wolman-type count of the armour on a dry section of the river bed. When a dry bar does not exist the armour in an area of the wet streambed is to sample and the measurements transformed analytically to the same type of results that would have been obtained from the standard Wolman procedure. A comparison of the results for the San Miguel River in Colorado shows significant differences in the median size of the armour. The method use to determine the porosity is not 'high-tech' and there is a need improve knowledge of the porosity because of the importance of porosity in the aquatic ecosystem. The technique is to measure the in-situ volume of a substrate sample by measuring the volume of a frame over the substrate and then repeated the volume measurement after the sample is obtained from within the frame. The difference in the volumes is the volume of the sample.

Conference Paper↗
USGS2024

Increased pathogen exposure of a marine apex predator over three decades

Environmental changes associated with global warming create new opportunities for pathogen and parasite transmission in Arctic wildlife. As an apex predator ranging over large, remote areas, changes in pathogens and parasites in polar bears are a useful indicator of changing transmission dynamics in Arctic ecosystems. We examined prevalence and risk factors associated with exposure to parasites and viral and bacterial pathogens in Chukchi Sea polar bears. Serum antibodies to six pathogens were detected and prevalence increased between 1987–1994 and 2008–2017 for five: Toxoplasma gondii , Neospora caninum , Francisella tularensis , Brucella abortus/suis , and canine distemper virus. Although bears have increased summer land use, this behavior was not associated with increased exposure. Higher prevalence of F. tularensis , C. burnetii , and B. abortus/suis antibodies in females compared to males, however, could be associated with terrestrial denning. Exposure was related to diet for several pathogens indicating increased exposure in the food web. Elevated white blood cell counts suggest a possible immune response to some pathogens. Given that polar bears face multiple stressors in association with climate change and are a subsistence food, further work is warranted to screen for signs of disease.

Alaska↗
USGS2017

U.S. Geological Survey—Energy and wildlife research annual report for 2017

Introduction Terrestrial and aquatic ecosystems provide valuable services to humans and are a source of clean water, energy, raw materials, and productive soils. The Nation’s food supply is more secure because of wildlife. For example, native pollinators enhance agricultural crops, and insect-eating bats provide pest control services worth billions of dollars to farmers annually. Fish and wildlife are also vital to a vibrant outdoor recreation and tourism industry. Recreational activities, such as hunting, shooting, boating, and angling, generated \$1.1 billion in excise taxes paid to State wildlife agencies in 2017. National parks, wildlife refuges, and monuments accounted for $35 billion in economic output and 318,000 jobs nationwide in 2016. Additional economic benefits are generated from the use and enjoyment of wildlife in State-owned lands and waters. Although the United States is rich in natural resources, human activity continues to place new pressures on fish and wildlife and the habitats they rely on. The United States became the world’s top producer of petroleum and natural gas products in 2012, surpassing Russia’s natural gas production levels in 2009 and Saudi Arabia’s petroleum production in 2013. The U.S. Energy Information Administration projects that the demand for liquid fuel, natural gas, and renewable energy will show strong growth in the next 20 years. Wind energy has demonstrated consistent growth since 2007 with now more than 53,000 wind turbines contributing to power grids in 41 States, Guam, and Puerto Rico. Solar energy has seen rapid growth since 2013 and made up nearly one-third of the total electricity generation additions in 2016. Yet as our Nation works to advance energy security and sustain wildlife, some conflicts have surfaced. Impacts of an expanding energy infrastructure include fragmentation and loss of habitat as well as mortality of birds, bats, fish, and other animals from interactions with energy generation facilities. Because energy development can often occur in wildlife habitats, ecological science can help guide project siting and operational decisions to areas that present the lowest risk to wildlife and energy developers. To address these challenges and make the most of new opportunities, the U.S. Geological Survey is producing innovative science to develop workable solutions that can help sustain wildlife and the habitat they rely upon, while allowing informed development.

Circular↗
USGS2018

Alaska

Alaska is the largest state in the Nation, almost one-fifth the size of the combined lower 48 United States, and is rich in natural capital resources. Alaska is often identified as being on the front lines of climate change since it is warming faster than any other state and faces a myriad of issues associated with a changing climate. The cost of infrastructure damage from a warming climate is projected to be very large, potentially ranging from $110 to $270 million per year, assuming timely repair and maintenance. Although climate change does and will continue to dramatically transform the climate and environment of the Arctic, proactive adaptation in Alaska has the potential to reduce costs associated with these impacts. This includes the dissemination of several tools, such as guidebooks to support adaptation planning, some of which focus on Indigenous communities. While many opportunities exist with a changing climate, economic prospects are not well captured in the literature at this time. As the climate continues to warm, there is likely to be a nearly sea ice-free Arctic during the summer by mid-century. Ocean acidification is an emerging global problem that will intensify with continued carbon dioxide (CO 2 ) emissions and negatively affects organisms. Climate change will likely affect management actions and economic drivers, including fisheries, in complex ways. The use of multiple alternative models to appropriately characterize uncertainty in future fisheries biomass trajectories and harvests could help manage these challenges. As temperature and precipitation increase across the Alaska landscape, physical and biological changes are also occurring throughout Alaska’s terrestrial ecosystems. Degradation of permafrost is expected to continue, with associated impacts to infrastructure, river and stream discharge, water quality, and fish and wildlife habitat. Longer sea ice-free seasons, higher ground temperatures, and relative sea level rise are expected to exacerbate flooding and accelerate erosion in many regions, leading to the loss of terrestrial habitat in the future and in some cases requiring entire communities or portions of communities to relocate to safer terrain. The influence of climate change on human health in Alaska can be traced to three sources: direct exposures, indirect effects, and social or psychological disruption. Each of these will have different manifestations for Alaskans when compared to residents elsewhere in the United States. Climate change exerts indirect effects on human health in Alaska through changes to water, air, and soil and through ecosystem changes affecting disease ecology and food security, especially in rural communities. Alaska’s rural communities are predominantly inhabited by Indigenous peoples who may be disproportionately vulnerable to socioeconomic and environmental change; however, they also have rich cultural traditions of resilience and adaptation. The impacts of climate change will likely affect all aspects of Alaska Native societies, from nutrition, infrastructure, economics, and health consequences to language, education, and the communities themselves. The profound and diverse climate-driven changes in Alaska’s physical environment and ecosystems generate economic impacts through their effects on environmental services. These services include positive benefits directly from ecosystems (for example, food, water, and other resources), as well as services provided directly from the physical environment (for example, temperature moderation, stable ground for supporting infrastructure, and smooth surface for overland transportation). Some of these effects are relatively assured and in some cases are already occurring. Other impacts are highly uncertain, due to their dependence on the structure of global and regional economies and future human alterations to the environment decades into the future, but they could be large. In Alaska, a range of adaptations to changing climate and related environmental conditions are underway and others have been proposed as potential actions, including measures to reduce vulnerability and risk, as well as more systemic institutional transformation.

Report↗
USGS2009

Use of predictive models and rapid methods to nowcast bacteria levels at coastal beaches

The need for rapid assessments of recreational water quality to better protect public health is well accepted throughout the research and regulatory communities. Rapid analytical methods, such as quantitative polymerase chain reaction (qPCR) and immunomagnetic separation/adenosine triphosphate (ATP) analysis, are being tested but are not yet ready for widespread use. Another solution is the use of predictive models, wherein variable(s) that are easily and quickly measured are surrogates for concentrations of fecal-indicator bacteria. Rainfall-based alerts, the simplest type of model, have been used by several communities for a number of years. Deterministic models use mathematical representations of the processes that affect bacteria concentrations; this type of model is being used for beach-closure decisions at one location in the USA. Multivariable statistical models are being developed and tested in many areas of the USA; however, they are only used in three areas of the Great Lakes to aid in notifications of beach advisories or closings. These “operational” statistical models can result in more accurate assessments of recreational water quality than use of the previous day's Escherichia coli (E. coli) concentration as determined by traditional culture methods. The Ohio Nowcast, at Huntington Beach, Bay Village, Ohio, is described in this paper as an example of an operational statistical model. Because predictive modeling is a dynamic process, water-resource managers continue to collect additional data to improve the predictive ability of the nowcast and expand the nowcast to other Ohio beaches and a recreational river. Although predictive models have been shown to work well at some beaches and are becoming more widely accepted, implementation in many areas is limited by funding, lack of coordinated technical leadership, and lack of supporting epidemiological data.

Aquatic Ecosystem Health & Management↗
USGS2022

Contaminants of emerging concern in the Great Lakes: Science to inform management practices for protecting the health and integrity of wildlife populations from adverse effects: GLRI action plan I, focus area 1, goal 5

Executive Summary: Under Action Plan I (2010-2014) of the Great Lakes Restoration Initiative (GLRI), Federal and Academic partners began an investigation of the presence and distribution of contaminants of emerging concern (CECs) in the Great Lakes and potential impacts on fish and wildlife. The term CECs is applied to a broad range of chemicals that are currently in use but for which we currently lack good understanding of whether fish, wildlife, or humans are being exposed and/or whether negative health or environmental effects are expected if exposure occurs. Pharmaceuticals, personal care products, flame retardants, many current use pesticides, and poly- and perfluorinated chemicals are some well-known groups of CECs, but there is no definitive or comprehensive list that can be used to support the management of CECs to reduce impacts on the Great Lakes ecosystem. Four overarching goals were identified for this collaborative investigation: 1. Evaluate the sources, occurrence, and distribution of CECs across the Great Lakes Basin. 2. Examine associations between the distribution of CECs and land-use patterns. 3. Review both scientific literature and field-generated data to determine the potential for CECs to cause adverse effects on Great Lakes fish and wildlife populations. 4. Develop efficient strategies to survey and/or monitor for threats that CECs may pose in order to take effective management actions before those threats evolve into large scale impacts on Great Lakes ecosystems or the services they provide. Achievement of these goals ensures progress towards Focus Area 1: Toxic Substances and Areas of Concern from GLRI Action Plan I, Goal 5: “ The health and integrity of wildlife populations and habitat are protected from adverse chemical and biological effects associated with the presence of toxic substances in the Great Lakes Basin ”. This large-scale research effort was comprised of individual and collaborative projects from multiple federal agencies and academic institutions, involving over 85 investigators, and overseen by the U.S. Environmental Protection Agency (EPA) Region 5, Great Lakes National Program Office. Partners include the United States Geological Survey, the National Oceanic and Atmospheric Administration, U.S. Fish and Wildlife Service, Saint Cloud State University, the U.S. EPA Office of Research and Development, and the U.S. Army Corps of Engineers. Key findings: 1. Contaminants of emerging concern were found throughout the monitored Great Lakes tributaries, but types and concentrations vary in association with regional land use. CECs were detected in nearly all samples collected. The type and concentration of the specific contaminants detected varied considerably among field sites and in association with land use type, such as urban, agricultural, wetland, 2 or forest. Contaminants were detected in the water column, sediment, and tissues of all species surveyed in the current work (mussels, aquatic insects, fish, and insect-eating birds). 2. There were over 20 contaminants for which CEC concentrations approached or exceeded those reported to cause toxicity in laboratory experiments. This was based on detection in water, sediments and or biota at one or more field sites. These contaminants represent compounds that warrant further investigation and monitoring with respect to potential impacts in certain areas of the Great Lakes basin. Based on the present investigation, compounds of greatest concern include: polycyclic aromatic hydrocarbons, associated with oil-based products and combustion of organic matter; atrazine, an herbicide; dichlorvos, an insecticide; and ibuprofen and venlafaxine, both pharmaceuticals. 3. Results suggest that mixtures of CECs presently found in most Great Lakes tributary locations surveyed may elicit subtle biological effects, but likely are not, alone, causing obvious detriment to current communities of fish and wildlife. CECs detected in the Great Lakes were associated with subtle biological effects like changes in gene expression, altered circulating glucose, etc. in both wild-caught and laboratory-reared organisms. These effects were generally not indicative of reproductive failure or mortality. However, the effects may have more serious implications when combined with other sources of stress like habitat degradation, changing climate conditions, and competition with invasive species. Due to limited historical data, it is unknown whether severe CEC-related impacts have already affected aquatic communities in waterbodies that have received long-term inputs of these contaminants. Likewise, under Action Plan I, biological effects were not necessarily evaluated at the sites where CEC concentrations exceeding laboratory toxicity thresholds were detected. As a result, strategic, ongoing surveillance and monitoring of CECs is warranted. This collaborative investigation resulted in new tools, approaches, and data that can be used to inform and support the management of CECs to reduce their impacts on Great Lakes natural resources. The following products of this research effort are available through https://communities.geoplatform.gov/glri/ or by contacting the investigators (see technical chapters found in Appendices A-F): 1. Database of CEC occurrence and concentrations in US tributary streams. The database includes CEC detections in water, sediment, and fish and wildlife tissues, and represents the most comprehensive survey of CECs in the Great Lakes Region. 2. Synopses of results and key findings. Integrated summaries of results, conclusions, and management implications of the CEC research are available through reports, topical fact sheets, and presentations. 3. Technical publications: This collaborative research effort has resulted in over 50 peer-reviewed publications, agency reports, and data releases that can be of use to resource managers, the scientific community, and members of the public. 4. Innovative tools. Innovative monitoring devices, sampling equipment, conceptual frameworks, and software applications were developed over the course of this 3 research. These tools are transferable to stakeholders via internet accessibility or via specifications, instructions, and demonstration detailed in technical publications. Hypotheses to guide CECs research under Action Plan II. Findings from 2010-2014 were used to guide further research in 2015-2018 for basin-wide surveillance of CECs and for sites warranting further study of potential biological impacts of CECs. Additional surveillance included both evaluation of additional classes of contaminants and expanded lists for chemical classes shown to be of greatest concern. Mixtures of some of the most frequently detected contaminants were also tested in laboratory studies to understand whether long term exposures to multiple contaminants may result in effects not evident from uncontrolled, short-term field experiments.

Great Lakes↗
USGS2021

Characterization of groundwater quality and discharge with emphasis on selenium in an irrigated agricultural drainage near Delta, Colorado, 2017–19

Selenium is a water-quality constituent of concern for aquatic ecosystems in the lower Gunnison River Basin. Selenium is derived from bedrock of the Mancos Shale and is mobilized and transported to groundwater and surface water by application of irrigation water. Although it is recognized that groundwater contributes an appreciable amount of selenium to surface water, few studies have addressed interactions between the two. The U.S. Geological Survey in cooperation with the Colorado Water Conservation Board conducted a study during 2017–19 to characterize the quality and quantity of groundwater discharging to an agricultural drainage near Delta, Colorado, locally known as Sunflower Drain. Water quality in the study area is characterized by high dissolved solids with elevated concentrations of selenium and nitrate resulting from dissolution of soluble salts in the Mancos Shale. Selenium concentrations have decreased by 50 percent since the early 2000s, possibly in response to irrigation system improvements. Stable water isotopes indicate streamflow is dominated by canal water during the irrigation season (April to October) and, during the nonirrigation season (November to March), is dominated by groundwater that has undergone some degree of evaporation. Pesticide and pharmaceutical compounds were infrequently detected, and results indicate they were derived from sources outside the study area such that they do not appear to be useful as tracers of groundwater sources. Stable isotopes of nitrate indicate that nitrate originates from the Mancos Shale, and the isotopic composition is enriched by denitrification in the groundwater system. Using a mass-balance approach, estimated groundwater discharge rates to Sunflower Drain ranged from 0.15 to 0.27 cubic feet per second per mile with one losing reach identified. Selenium, sulfate, and nitrate concentrations in groundwater estimated by mass-balance calculations were similar to concentrations measured in the Poly 17 observation well, located in a largely irrigated area in east tributary. One tributary reach had higher concentrations of selenium, sulfate, and nitrate likely reflecting localized inputs of more concentrated groundwater, similar to the concentrations in the Poly 7 observation well, which is downgradient from a residential area in the west tributary. Three pilot studies were conducted, including fiber optic distributed temperature sensing to detect groundwater discharge zones in the stream channel, a passive seismic technique to estimate depth to bedrock, and use of radon-222 as a geochemical tracer of groundwater discharge. All three techniques show promise as additional approaches for investigating groundwater discharge surface-water systems in irrigated drainage areas on Mancos Shale. The factors that affect groundwater movement mainly include when and where irrigation water is transported and applied, and the distribution of bedrock of the Mancos Shale and overlying alluvial deposits. The average groundwater recharge rate for the study area was estimated at 8.1 inches per year, based on mass balance calculations from synoptic survey data. Along the western tributary of Sunflower Drain, there was evidence that spills from the East Canal may recharge the groundwater aquifer adjacent to the stream channel. Groundwater movement to the stream channel may be controlled by the topography of the alluvial/bedrock interface or focused along human-made features, such as tile drains and ditches constructed around irrigated fields. On larger scales, the top of bedrock was also important, creating a topographic constriction that caused a zone of groundwater discharge. The groundwater system is complex, and further study could better define the system, possibly through application of a groundwater flow model and more extensive studies using some of the exploratory methods evaluated in this study.

Colorado↗
USGS2017

Species composition, timing, and weather correlates of autumn open-water crossings by raptors migrating along the East-Asian Oceanic Flyway

Raptor migration rarely involves long-distance movements across open oceans. One exception occurs along the East-Asian Oceanic Flyway. We collected migration data at two terrestrial hawkwatch sites along this flyway to better understand open-ocean movements along this largely overwater corridor. At the northern end of the Philippines, at Basco on the island of Batan, we recorded 7587 migratory raptors in autumn 2014. Near the southern end of the Philippines, at Cape San Agustin on the island of Mindanao, we recorded 27,399 raptors migrating in autumn 2012. Chinese Sparrowhawks ( Accipiter soloensis ) were the most common raptors observed, making up approximately 89% and 92% of total records for Basco and Cape San Agustin, respectively. The Grey-faced Buzzard ( Butastur indicus ) was the second most common raptor migrant, accounting for 8% of the total counts at both watch sites. The migration period was about 1–2 wk earlier at Basco, the more northerly site, than at Cape San Agustin. Overwater flights at Basco peaked in both the morning and late afternoon, whereas at Cape San Agustin there was only a morning peak. In general, the rate of migration passage at both sites was highest with clear skies when winds were blowing from the northwest. However, we observed interspecific differences in migration behavior at both sites, with Accipiters more likely to be observed with tailwinds and eastward winds, and Grey-faced Buzzards more likely observed with headwinds. These results help to characterize poorly known aspects of raptor biology and to identify potential migratory bottlenecks or key sites for raptor conservation in little-studied Philippine tropical ecosystems.

Journal of Raptor Research↗
USGS2008

Top predators in relation to bathymetry, ice and krill during austral winter in Marguerite Bay, Antarctica

A key hypothesis guiding the US Southern Ocean Global Ocean Ecosystems Dynamics (US SO GLOBEC) program is that deep across-shelf troughs facilitate the transport of warm and nutrient-rich waters onto the continental shelf of the Western Antarctic Peninsula, resulting in enhanced winter production and prey availability to top predators. We tested aspects of this hypothesis during austral winter by assessing the distribution of the resident pack-ice top predators in relation to these deep across-shelf troughs and by investigating associations between top predators and their prey. Surveys were conducted July-August 2001 and August-September 2002 in Marguerite Bay, Antarctica, with a focus on the main across-shelf trough in the bay, Marguerite Trough. The common pack-ice seabird species were snow petrel (Pagodroma nivea, 1.2 individuals km-2), Antarctic petrel (Thalassoica antarctica, 0.3 individuals km-2), and Ade??lie penguin (Pygoscelis adeliae, 0.5 individuals km-2). The most common pack-ice pinniped was crabeater seal (Lobodon carcinophagus). During both winters, snow and Antarctic petrels were associated with low sea-ice concentrations independent of Marguerite Trough, while Ade??lie penguins occurred in association with this trough. Krill concentrations, both shallow and deep, also were associated with Ade??lie penguin and snow petrel distributions. During both winters, crabeater seal occurrence was associated with deep krill concentrations and with regions of lower chlorophyll concentration. The area of lower chlorophyll concentrations occurred in an area with complex bathymetry close to land and heavy ice concentrations. Complex or unusual bathymetry via its influence on physical and biological processes appears to be one of the keys to understanding how top predators survive during the winter in this Antarctic region. ?? 2007 Elsevier Ltd. All rights reserved.

Deep-Sea Research Part II: Topical Studies in Ocea↗
USGS2023

Source contributions to suspended sediment and particulate selenium export from the Loutsenhizer Arroyo and Sunflower Drain watersheds in Colorado

Selenium in aquatic ecosystems of the lower Gunnison River Basin in Colorado is affecting the recovery of populations of endangered, native fish species. Dietary exposure is the primary pathway for bioaccumulation of selenium in fish, and particulate selenium can be consumed directly by fish or by the invertebrates on which fish feed. Although selenium can be incorporated into particulate matter via biogeochemical processes, particulate selenium can also enter aquatic ecosystems of the lower Gunnison River Basin from sediments derived from the selenium-rich Mancos Shale. The U.S. Geological Survey, in cooperation with the Colorado Water Conservation Board, conducted this study during 2018–19 to identify sources of selenium-rich suspended sediments from two watersheds underlain by Mancos Shale: Loutsenhizer Arroyo and Sunflower Drain, which is a locally known agricultural drainage near the municipality of Delta, Colorado. A multipronged approach (fieldwork, laboratory work, and computer modeling) referred to as “sediment fingerprinting” was used to evaluate sources of suspended sediments in the streams flowing out of the two studied watersheds. Four potential source types for suspended sediments were identified and sampled (using soil plugs) within the watersheds: rangelands, agricultural fields, arroyo walls, and streambanks. The sediment fingerprinting approach used elemental concentrations and naturally occurring fallout radionuclides as tracers to apportion percent contributions from the four source types of suspended sediments found in streamflow from both watersheds. To determine the dominant sources of suspended sediment in streamflow from both watersheds, a mathematical “unmixing” model was used. Unmixing models apportion source percentages to samples of material in which those sources are mixed. These models used elemental and isotopic data in the suspended sediments to unmix them into proportional contributions from source types. The results indicated that arroyo walls and streambanks generally dominated as sources of the suspended sediment. Arroyo walls and streambanks were channel-adjacent sources, with sediments mobilized by water flowing within the stream channel. These sources accounted for greater than 50 percent of suspended sediment in all but one sample and accounted for 100 percent of suspended sediment in 5 of the 11 samples collected. Rangeland and agricultural field sources were located in uplands outside of stream channels and were detected more often during the non-irrigation season. Rangeland and agricultural field sources each were found in 5 of the 11 samples collected. Concentrations of selenium in sediment-source samples were comparatively greater in streambanks and lower in rangelands, with agricultural fields and arroyo walls being intermediate. As a result, source apportionments for particulate selenium skewed towards sources adjacent to stream channels more than for suspended sediments. Water imports for irrigation have changed the hydrology of the watersheds, and a notable fraction of imported water passes through the watersheds rapidly. The rapid flowthrough water during the irrigation season likely contributes heavily to sediment erosion and transport in Loutsenhizer Arroyo and Sunflower Drain, particularly from channel-adjacent sources of sediment. Decreases in irrigation season streamflow, at least in Loutsenhizer Arroyo, may have decreased sediment erosion and transport during the 2018–20 irrigation seasons compared to the 2015–17 seasons.

Colorado↗
USGS2019

Survival and movements of head‐started Mojave desert tortoises

Head‐starting is a conservation strategy in which young animals are protected in captivity temporarily before their release into the wild at a larger size, when their survival is presumably increased. The Mojave desert tortoise ( Gopherus agassizii ) is in decline, and head‐starting has been identified as one of several conservation measures to assist in recovery. To evaluate the efficacy of indoor head‐starting, we released and radio‐tracked 68 juvenile tortoises from a 2015 cohort in the Mojave National Preserve, California, USA. We released 20 tortoises at hatching (control) in September 2015, and reared 28 indoors and 20 outdoors in predator‐proof enclosures for 7 months before releasing them in April 2016. We monitored tortoises at least weekly after release until 27 October 2016, and documented survivorship, movement, and surface activity. We estimated survivorship by treatment and evaluated effects of treatment, proximity to a raven ( Corvus corax ) nest (predator) coincidentally established after release, distance moved between monitoring events, surface activity, and release size on individual fate in a generalized linear model. Although indoor head‐start tortoises reached the size of 5–6‐year‐old wild tortoises by release at 7 months of age, survival did not differ significantly among the 3 treatment groups. Combined annual survival was 0.44 (95% CI = 0.34–0.58). Tortoises that were closer to an active raven nest were significantly more likely to die, as were those seen more often outside their burrows and active aboveground. Predicted estimates for short‐term probability of survival approached 1.0 as distance from a raven nest exceeded approximately 1.6 km. Rearing treatment, movement distance, and body size were not significant predictors of fate over the 1‐year monitoring period. Head‐started tortoises released ≥1.6 km from areas of raven activity will likely have higher short‐term survival. Population recovery through head‐starting alone is unlikely to be successful if systemic ecosystem‐level issues, such as habitat degradation and conditions that promote human‐subsidized predators, are not ameliorated. © 2019 The Wildlife Society.

California↗
USGS2019

Top-down effect of repatriating bald eagles hinder jointly recovering competitors

1. The recovery of piscivorous birds around the world is touted as one of the great conservation successes of the 21st century, but for some species, this success was short-lived. Bald eagles, ospreys, and great blue herons began repatriating Voyageurs National Park, USA, in the mid-20th century. However, after 1990, only eagles continued their recovery, while osprey and heron recovery failed for unknown reasons. 2. We aimed to evaluate whether top-down effects of bald eagles, and bottom-up effects of inclement weather, habitat quality, and fish resources contributed to the failed recovery of ospreys and herons in a protected area. 3. We quantified the relative influence of top-down and bottom-up factors on nest colonization, persistence (i.e., nest reuse) and success for ospreys, and occurrence and size of heronries using 26 years (1986-2012) of spatially-explicit monitoring data coupled with multi-response hierarchical models and Bayesian variable selection approaches. 4. Bald eagles were previously shown to recover faster due to intensive nest protection and management. Increased numbers of eagles were associated with a reduction in the numbers of osprey nests, their nesting success, and heronry size; while higher local densities of nesting eagles deterred heronries nearby. We found little evidence of bottom-up limitations on the failed recovery of herons and ospreys. 5. We present a conservation conundrum: bald eagles are top predators and a flagship species of conservation that have benefited from intensive protection, but this likely hindered the recovery of ospreys and herons. Returning top predators, or rewilding, is widely promoted as a conservation strategy for top-down ecosystem recovery, but managing top predators in isolation of jointly recovering species can halt or reverse ecosystem recovery. Previous studies warn of the potential consequences of ignoring biotic interactions amongst recovering species, but we go further by quantifying how these interactions contributed to failed recoveries via impacts on the nesting demography of jointly recovering species. Multi-species management is paramount to realizing the ecosystem benefits of top predator recovery.

Minnesota↗