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Post-harvest field manipulations to conserve waste rice for waterfowl

Rice seeds escaping collection by combines during harvest (hereafter, waste rice) provide quality forage for migrating and wintering waterfowl in the Lower Mississippi Alluvial Valley (MAV) and other rice growing regions in the United States. Recent sample surveys across the MAV have revealed abundance of waste rice in fields declined an average of 71% between harvest and late autumn. Thus, we evaluated the ability of common post-harvest, field-management practices to conserve waste rice for waterfowl until early winter via controlled experiments in Mississippi rice test plots in 2001 and 2003 and analyses of data from MAV-wide surveys of waste rice in rice production fields in 2000-2002. Our experiments indicated test plots with burned rice stubble that were not flooded during autumn contained more waste rice than other treatments in 2001 (P?0.10). Waste-rice abundance in test plots did not differ among postharvest treatments in 2003 (P = 0.97). Our analyses of data from the MAV sample surveys did not detect differences in abundance of waste rice among fields burned, rolled, disked, or left in standing stubble post-harvest (P?0.04; Bonferroni corrected critical ( a= 0.017). Because results from test-plot experiments were inconclusive, we based our primary inference regarding best post-harvest treatments on patterns of rice abundance identified from the MAV surveys and previously documented environmental and agronomic benefits of managing harvested rice fields for wintering waterfowl. Therefore, we recommend leaving standing stubble in rice fields after harvest as a preliminary beneficial management practice. We suggest future research evaluate potential of postharvest practices to conserve waste rice for waterfowl and reduce straw in production rice fields managed for wintering waterfowl throughout the MAV.

Proceedings of the Annual Conference of the Southe

U.S. Geological Survey response to chronic wasting disease

The U.S. Geological Survey (USGS) is focused on the development of early detection and effective response tools that promote an adaptive management approach to chronic wasting disease (CWD). USGS scientists across the United States are working to understand the biology of CWD, assess and predict the spread and persistence in wildlife and the environment, and develop tools for early detection and control.

Fact Sheet

Implications of theories of asteroid and comet impact for policy options for management of spent nuclear fuel and high-level radioactive wastes

Concern with the threat posed by terrestrial asteroid and comet impacts has heightened as the catastrophic consequences of such events have become better appreciated. Although the probabilities of such impacts are very small, a reasonable question for debate is whether such phenomena should be taken into account in deciding policy for the management of spent fuel and high-level radioactive waste. The rate at which asteroid or comet impacts would affect areas of surface storage of radioactive waste is about the same as the estimated rate at which volcanic activity would affect the Yucca Mountain area. The Underground Retrievable Storage (URS) concept could satisfactorily reduce the risk from cosmic impact with its associated uncertainties in addition to providing other benefits described by previous authors.

Conference Paper

Transmission of chronic wasting disease in Wisconsin white-tailed deer: Implications for disease spread and management

Few studies have evaluated the rate of infection or mode of transmission for wildlife diseases, and the implications of alternative management strategies. We used hunter harvest data from 2002 to 2013 to investigate chronic wasting disease (CWD) infection rate and transmission modes, and address how alternative management approaches affect disease dynamics in a Wisconsin white-tailed deer population. Uncertainty regarding demographic impacts of CWD on cervid populations, human and domestic animal health concerns, and potential economic consequences underscore the need for strategies to control CWD distribution and prevalence. Using maximum-likelihood methods to evaluate alternative multi-state deterministic models of CWD transmission, harvest data strongly supports a frequency-dependent transmission structure with sex-specific infection rates that are two times higher in males than females. As transmissible spongiform encephalopathies are an important and difficult-to-study class of diseases with major economic and ecological implications, our work supports the hypothesis of frequency-dependent transmission in wild deer at a broad spatial scale and indicates that effective harvest management can be implemented to control CWD prevalence. Specifically, we show that harvest focused on the greater-affected sex (males) can result in stable population dynamics and control of CWD within the next 50 years, given the constraints of the model. We also provide a quantitative estimate of geographic disease spread in southern Wisconsin, validating qualitative assessments that CWD spreads relatively slowly. Given increased discovery and distribution of CWD throughout North America, insights from our study are valuable to management agencies and to the general public concerned about the impacts of CWD on white-tailed deer populations.

Wisconsin

Assessment of nonpoint source chemical loading potential to watersheds containing uranium waste dumps associated with uranium exploration and mining, Browns Hole, Utah

During August of 2008, 35 solid-phase samples were collected from abandoned uranium waste dumps, undisturbed geologic background sites, and adjacent streambeds in Browns Hole in southeastern Utah. The objectives of this sampling program were (1) to assess impacts on human health due to exposure to radium, uranium, and thorium during recreational activities on and around uranium waste dumps on Bureau of Land Management lands; (2) to compare concentrations of trace elements associated with mine waste dumps to natural background concentrations; (3) to assess the nonpoint source chemical loading potential to ephemeral and perennial watersheds from uranium waste dumps; and (4) to assess contamination from waste dumps to the local perennial stream water in Muleshoe Creek. Uranium waste dump samples were collected using solid-phase sampling protocols. Solid samples were digested and analyzed for major and trace elements. Analytical values for radium and uranium in digested samples were compared to multiple soil screening levels developed from annual dosage calculations in accordance with the Comprehensive Environmental Response, Compensation, and Liability Act's minimum cleanup guidelines for uranium waste sites. Three occupancy durations for sites were considered: 4.6 days per year, 7.0 days per year, and 14.0 days per year. None of the sites exceeded the radium soil screening level of 96 picocuries per gram, corresponding to a 4.6 days per year exposure. Two sites exceeded the radium soil screening level of 66 picocuries per gram, corresponding to a 7.0 days per year exposure. Seven sites exceeded the radium soil screening level of 33 picocuries per gram, corresponding to a 14.0 days per year exposure. A perennial stream that flows next to the toe of a uranium waste dump was sampled, analyzed for major and trace elements, and compared with existing aquatic-life and drinking-water-quality standards. None of the water-quality standards were exceeded in the stream samples.

Utah

Probable hydrologic effects of a hypothetical failure of Mackay Dam on the Big Lost River Valley from Mackay, Idaho to the Idaho National Engineering Laboratory

Mackay Dam is an irrigation reservoir on the Big Lost River, Idaho, approximately 7.2 kilometers northwest of Mackay, Idaho. Consequences of possible rupture of the dam have long concerned the residents of the river valley. The presence of reactors and of a management complex for nuclear wastes on the reservation of the Idaho National Engineering Laboratory (INEL), near the river , give additional cause for concern over the consequences of a rupture of Mackay Dam. The objective of this report is to calculate and route the flood wave resulting from the hypothetical failure of Mackay Dam downstream to the INEL. Both a full and a 50 percent partial breach of this dam are investigated. Two techniques are used to develop the dam-break model. The method of characteristics is used to propagate the shock wave after the dam fails. The linear implicit finite-difference solution is used to route the flood wave after the shock wave has dissipated. The time of travel of the flood wave, duration of flooding, and magnitude of the flood are determined for eight selected sites from Mackay Dam, Idaho, through the INEL diversion. At 4.2 kilometers above the INEL diversion, peak discharges of 1,550.2 and 1,275 cubic meters per second and peak flood elevations of 1,550.3 and 1,550.2 meters were calculated for the full and partial breach, respectively. Flood discharges and flood peaks were not compared for the area downstream of the diversion because of the lack of detailed flood plain geometry. (Kosco-USGS)

Idaho

Acoustic mapping as an environmental management tool: I. detection of barrels of low-level radioactive waste, Gulf of the Farallones National Marine Sanctuary, California

The oceans have been and will continue to be disposal sites for a wide variety of waste products. Often these wastes are not dumped at the designated sites or transport occurs during or after dumping, and, subsequent attempts to monitor the effects the waste products have on the environment are inadequate because the actual location of the waste is not known. Acoustic mapping of the seafloor with sidescan sonar is a very effective technique for locating and monitoring dredge-spoil material and other debris. Sidescan sonar provides an acoustic image or sonograph of the sea floor that is similar to a satellite image of the Earth's land surface. In effect sidescan sonar allows the water column to be stripped from the sea floor, thereby providing a clear, unobstructed view of the sea bed. An example of the potential of this technique is summarized herein for the Gulf of the Farallones region. More than 47 800 drums (55 gallon) and other containers of low-level radioactive waste were dumped on the continental margin offshore the San Francisco Bay between 1946 and 1970. These drums now litter a large area (1200 km 2 ) of the sea floor within the Gulf of the Farallones National Marine Sanctuary (GFNMS). The exact location of the drums and the potential hazard the drums pose to the environment are unknown. To evaluate the risk, samples of the sediment, biota and water must be collected near and distant from the concentrations of barrels. To do this the exact location of the barrels must be known prior to sampling. The USGS, through a cooperative research agreement with GFNMS, used sidescan sonar to map two areas within the sanctuary. Total sea-floor coverage was obtained and computer-processed sonographic mosaics were constructed on board ship. Many small nongeologic targets were distributed throughout the survey areas that covered about 70 km 2 on the shelf and 120 km 2 on the slope. Analysis of the sidescan data suggests that the targets are 55-gallon drums. This interpretation was confirmed at one site with an underwater video and 35-mm camera system. Data were collected with both a 30-kHz and a 120-kHz sidescan system within a 15-km 2 area on the shelf. We found that the barrels were more easily detected with the mid-range 30-kHz system than with the higher resolution 120-kHz system. Maps of barrel distribution derived from the sonographs are being used to design sampling schemes to evaluate the risk that the radioactivity may have on the biota and environment.

California

Estimating GPS-based social aggregation metrics using collar data

Understanding social aggregation patterns in ungulate herds is essential for gaining behavioral insights, optimizing resource use, reducing human-wildlife conflict, and managing disease risk. As chronic wasting disease is the preeminent disease-related threat to cervid populations in North America, knowledge of contact between individuals and spatiotemporal patterns of aggregation provides opportunity to understand and potentially reduce disease risk while supporting sustainable population sizes. Herd density metrics, derived from global positioning system (GPS) data, can be used to inform management decisions. To effectively compare aggregation behavior within and between herds, aggregation metrics must be accurate. However, the consistency of metrics across different GPS collar sample sizes remains unclear and robust studies of big game require understanding how these factors may vary in different contexts. We examined the minimum sample size necessary for reliable calculations of three aggregation metrics: pairwise inter-animal distances, daily proximity rates, and kernel density estimate (KDE) areas. We used GPS collar data from the Jackson and West Green River elk herds ( Cervus canadensis ) in western Wyoming, USA, that differ in herd size and group structure (single versus multiple sub-groups), representing common practical contexts. Elk locations were acquired for the Jackson herd between 2016 and 2019 and from 2005 to 2010 for the West Green River herd. Herd-specific characteristics substantially influence the sample size necessary for accurate density measurements. As predicted, larger herds with many groups require more GPS collars than small herds with fewer groups. The sample size needed to accurately estimate aggregation varies by metric, with KDE areas, useful for indexing environmentally transmitted disease risk, generally requiring fewer samples, especially in high-density contexts. The required sample size also varies with seasonal changes in density. During periods of highest density, similar sample sizes are required to estimate inter-animal distances and proximity rates regardless of herd characteristics. Our results have implications for costs associated with studying big game herds, indicating fewer collars may be sufficient in some cases. These insights can aid researchers and managers in determining the appropriate number of GPS collars required for effective herd monitoring and informing relevant aggregation metrics for their management goals.

Wyoming

The effectiveness of harvest for limiting wildlife disease: Insights from 20 years of chronic wasting disease in Wyoming

Effective, practical options for managing disease in wildlife populations are limited, especially after diseases become established. Removal strategies (e.g., hunting or culling) are used to control wildlife diseases across a wide range of systems, despite conflicting evidence of their effectiveness. This is especially true for chronic wasting disease (CWD), an untreatable, fatal prion disease threatening cervid populations across multiple countries, for which recreational harvest has been suggested as an important disease control strategy. Using observational data to evaluate whether harvest effectively limits CWD prevalence has been difficult because statistical relationships between harvest and disease prevalence can arise from a causal effect of harvest (i.e., harvest's impacts on prevalence via changes in transmission or demographic structure) or from a number of alternative mechanisms. For instance, correlations between harvest and disease prevalence can also be driven by disease's impacts on population size and harvest (i.e., reverse causality) or from confounding variables (e.g., habitat or geographic location) that impact both harvest rates and disease prevalence. We analyzed two decades of surveillance data (2000–2021) from 10 mule deer herds in Wyoming, using statistical approaches informed by causal inference theory, to test for the effects of harvest on CWD prevalence. Herds with consistently high harvest pressure across 20 years had significantly lower prevalence. Our models predicted that harvesting 40% of adult males per year across 20 years would maintain prevalence below 5% on average, whereas if only 20% of males were harvested in each year, prevalence would increase to >30% by year 20. Moreover, shifting the relative harvest pressure within a herd over a shorter period (3 years) reduced subsequent prevalence, albeit to a smaller degree. Although high harvest is unlikely to completely eradicate CWD, our analysis suggests that maintaining hunting pressure on adult males is an important tactic for slowing CWD epidemics within mule deer herds. Our study also provides guidance for future analyses of longitudinal surveillance data, including the importance of demographic data and appropriate time lags.

Wyoming

Waste isolation and contaminant migration - Tools and techniques for monitoring the saturated zone-unsaturated zone-plant-atmosphere continuum

In 1976 the U.S. Geological Survey (USGS) began studies of unsaturated zone hydrology next to the Nation’s first commercial disposal facility for low-level radioactive waste (LLRW) near Beatty, NV. Recognizing the need for long-term data collection, the USGS in 1983 established research management areas in the vicinity of the waste-burial facility through agreements with the Bureau of Land Management and the State of Nevada. Within this framework, the Amargosa Desert Research Site (ADRS; http://nevada.usgs.gov/adrs/) is serving as a field laboratory for the sustained study of water-, gas-, and contaminant-transport processes, and the development of models and methods to characterize flow and transport. The research is built on multiple lines of data that include: micrometeorology; evapotranspiration; plant metrics; soil and sediment properties; unsaturated-zone moisture, temperature, and gas composition; geology and geophysics; and groundwater. Contaminant data include tritium, radiocarbon, volatile-organic compounds (VOCs), and elemental mercury. Presented here is a summary of monitoring tools and techniques that are being applied in studies of waste isolation and contaminant migration.

Conference Paper

The fitting of general force-of-infection models to wildlife disease prevalence data

Researchers and wildlife managers increasingly find themselves in situations where they must deal with infectious wildlife diseases such as chronic wasting disease, brucellosis, tuberculosis, and West Nile virus. Managers are often charged with designing and implementing control strategies, and researchers often seek to determine factors that influence and control the disease process. All of these activities require the ability to measure some indication of a disease's foothold in a population and evaluate factors affecting that foothold. The most common type of data available to managers and researchers is apparent prevalence data. Apparent disease prevalence, the proportion of animals in a sample that are positive for the disease, might seem like a natural measure of disease's foothold, but several properties, in particular, its dependency on age structure and the biasing effects of disease-associated mortality, make it less than ideal. In quantitative epidemiology, the a??force of infection,a?? or infection hazard, is generally the preferred parameter for measuring a disease's foothold, and it can be viewed as the most appropriate way to a??adjusta?? apparent prevalence for age structure. The typical ecology curriculum includes little exposure to quantitative epidemiological concepts such as cumulative incidence, apparent prevalence, and the force of infection. The goal of this paper is to present these basic epidemiological concepts and resulting models in an ecological context and to illustrate how they can be applied to understand and address basic epidemiological questions. We demonstrate a practical approach to solving the heretofore intractable problem of fitting general force-of-infection models to wildlife prevalence data using a generalized regression approach. We apply the procedures to Mycobacterium bovis (bovine tuberculosis) prevalence in bison (Bison bison) in Wood Buffalo National Park, Canada, and demonstrate strong age dependency in the force of infection as well as an increased mortality hazard in positive animals.

Ecology

Science for watershed decisions on abandoned mine lands; review of preliminary results, Denver, Colorado, February 4-5, 1998

From the Preface: There are thousands of abandoned or inactive mines on or adjacent to public lands administered by the U.S. Forest Service, Bureau of Land Management, and National Park Service. Mine wastes from many of these abandoned mines adversely affect resources on public lands. In 1995, an interdepartmental work group within the Federal government developed a strategy to address remediation of the many abandoned mines on public lands. This strategy is based on using a watershed approach to address the abandoned mine lands (AML) problem. The USGS, working closely with the Federal land-management agencies (FLMAs), is key for the success of this watershed approach. In support of this watershed approach, the USGS developed an AML Initiative with pilot studies in the Boulder River in Montana and the Animas River in Colorado. The goal of these studies is to design and implement a reliable strategy that will supply the scientific information to the FLMAs so that land managers can develop efficient and cost-effective remediation of AML. The symposium 'Science for Watershed Decisions on Abandoned Mine Lands: Review of Preliminary Results' held in Denver, Colorado, on February 4-5, 1998, provided the FLMAs a first look at the techniques, data, and interpretations being generated by the USGS pilot studies. This multidisciplined effort already is proving very valuable to land managers in making science-based AML cleanup decisions and will continue to be of increasing value as additional and more complete information is obtained. Ongoing interaction between scientists and land managers is essential to insure the efficient continuation and success of AML cleanup efforts.

Colorado

Understanding Metal Pathways in Mineralized Ecosystems

Successful management of ecosystems containing historical mine wastes requires understanding of processes that are responsible for the distribution, concentration, and bioavailability of potentially toxic elements. U.S. Geological Survey (USGS) scientists recently completed several investigations at historical mine sites in the western United States. These investigations have improved our understanding of how metals are mobilized from mineralized sources, are transported through the environment, and become available to humans and other biota. The new information is being used by Federal, State, and local agencies that manage and remediate abandoned mine lands.

Circular

A one-dimensional, steady-state, dissolved-oxygen model and waste-load assimilation study for Little Lick and Big Lick Creeks, Blackford and Delaware counties, Indiana

The Indiana State Board of Health is developing a State water-quality management plan that includes establishing limits for liquid wastes discharged into Indiana streams. A digital computer model was used to predict alternatives for future waste loadings on Little Lick and Big Lick Creeks that would be compatible with Indiana stream water-quality standards defined for two critical hydrologic conditions, summer and winter low flows. The model parameters included atmospheric reaeration, carbonaceous and nitrogenous biochemical-oxygen demand, and benthic-oxygen demand. The model was calibrated with data collected during three water-quality surveys at low flow. Verification of the model was not possible owing to varied effluent discharge during sampling. During these surveys, in-stream dissolved-oxygen concentration averaged less than 3 milligrams per liter, well below the State minimum requirement of 5.0 milligrams per liter. The model indicated that these low concentrations were caused by high waste loadings, lack of dilution, low reaeration, and benthic-oxygen demand. The hypothetical summer waste-assimilation study assumed that future reductions in discharge Loadings would decrease carbonaceous and benthic decay and increase nitrogenous decay. This hypothetical study indicated that projected effluent waste loads that would provide acceptable in-stream dis-solved-oxygen concentrations are highly dependent on rates of nitrification. Ammonia toxicity became the limiting water-quality criterion at low nitrification rates. The hypothetical winter waste-assimilation study indicated that projected dissolved-oxygen concentrations in Little Lick and Big Lick Creeks did not fall below the State standard. Owing to a lack of dilution, however, ammonia-nitrogen concentrations would violate in-stream toxicity standards in both Little Lick and Big Lick Creeks. In order to quantify the results of the waste-assimilation study, it would be necessary to collect additional stream data.

Indiana

A review of asteroid biology in the context of sea star wasting: Possible causes and consequences

Sea star wasting—marked in a variety of sea star species as varying degrees of skin lesions followed by disintegration—recently caused one of the largest marine die-offs ever recorded on the west coast of North America, killing billions of sea stars. Despite the important ramifications this mortality had for coastal benthic ecosystems, such as increased abundance of prey, little is known about the causes of the disease or the mechanisms of its progression. Although there have been studies indicating a range of causal mechanisms, including viruses and environmental effects, the broad spatial and depth range of affected populations leaves many questions remaining about either infectious or non-infectious mechanisms. Wasting appears to start with degradation of mutable connective tissue in the body wall, leading to disintegration of the epidermis. Here, we briefly review basic sea star biology in the context of sea star wasting and present our current knowledge and hypotheses related to the symptoms, the microbiome, the viruses, and the associated environmental stressors. We also highlight throughout the article knowledge gaps and the data needed to better understand sea star wasting mechanistically, its causes, and potential management.

Biological Bulletin

A deposit model for carbonatite and peralkaline intrusion-related rare earth element deposits

Carbonatite and alkaline intrusive complexes, as well as their weathering products, are the primary sources of rare earth elements. A wide variety of other commodities have been exploited from carbonatites and alkaline igneous rocks including niobium, phosphate, titanium, vermiculite, barite, fluorite, copper, calcite, and zirconium. Other elements enriched in these deposits include manganese, strontium, tantalum, thorium, vanadium, and uranium. Carbonatite and peralkaline intrusion-related rare earth element deposits are presented together in this report because of the spatial, and potentially genetic, association between carbonatite and alkaline rocks. Although these rock types occur together at many locations, carbonatite and peralkaline intrusion-related rare earth element deposits are not generally found together. Carbonatite hosted rare earth element deposits are found throughout the world, but currently only five are being mined for rare earth elements: Bayan Obo, Daluxiang, Maoniuping, and Weishan deposits in China and the Mountain Pass deposit in California, United States. These deposits are enriched in light rare earth elements, including lanthanum, cerium, praseodynium, and neodynium. The principal rare earth element-minerals associated with carbonatites are fluocarbonates (bastnäsite, parisite, and synchysite), hydrated carbonates (ancylite), and phosphates (monazite) with bastnäsite being the primary ore mineral. Calcite and dolomite are the primary gangue minerals. At present, the only rare earth element production from a peralkaline intrusion-related deposit is as a byproduct commodity at the Lovozero deposit in Russia. Important rare earth element minerals found in various deposits include apatite, eudialyte, loparite, gittinsite, xenotime, gadolinite, monazite, bastnäsite, kainosite, mosandrite, britholite, allanite, fergusonite, and zircon, and these minerals tend to be enriched in heavy rare earth elements. Carbonatite and alkaline intrusive complexes are derived from partial melts of mantle material, and neodymium isotopic data are consistent with the rare earth elements being derived from the parental magma. Deposits and these associated rock types tend to occur within stable continental tectonic units, in areas defined as shields, cratons, and crystalline blocks; they are generally associated with intracontinental rift and fault systems. Protracted fractional crystallization of the magma leads to enrichment in rare earth elements and other incompatible elements. Rare earth element mineralization associated with carbonatites can occur as either primary mineral phases or as mineralization associated with late stage orthomagmatic fluids. Rare earth element mineralization associated with alkaline intrusive complexes may occur as primary phases in magmatic layered complexes or as late-stage dikes and veins. The greatest environmental challenges associated with carbonatite and peralkaline intrusion-related rare earth element deposits center on the associated uranium and thorium. Considerable uncertainty exists around the toxicity of rare earth elements and warrants further investigation. The acid-generating potential of carbonatites and peralkaline intrusion-related deposits is low due to the dominance of carbonate minerals in carbonatite deposits, the presence of feldspars and minor calcite within the alkaline intrusion deposits, and only minor quantities of potentially acid-generating sulfides. Therefore, acid-drainage issues are not likely to be a major concern associated with these deposits. Uranium has the potential to be recovered as a byproduct, which would mitigate some of its environmental effects. However, thorium will likely remain a waste-stream product that will require management since progress is not being made towards the development of thorium-based nuclear reactors in the United States or other large scale commercial uses. Because some deposits are rich in fluorine and beryllium, these elements may be of environmental concern in certain locations.

Scientific Investigations Report