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The rising tide of ocean diseases: Unsolved problems and research priorities

New studies have detected a rising number of reports of diseases in marine organisms such as corals, molluscs, turtles, mammals, and echinoderms over the past three decades. Despite the increasing disease load, microbiological, molecular, and theoretical tools for managing disease in the world's oceans are under-developed. Review of the new developments in the study of these diseases identifies five major unsolved problems and priorities for future research: (1) detecting origins and reservoirs for marine diseases and tracing the flow of some new pathogens from land to sea; (2) documenting the longevity and host range of infectious stages; (3) evaluating the effect of greater taxonomic diversity of marine relative to terrestrial hosts and pathogens; (4) pinpointing the facilitating role of anthropogenic agents as incubators and conveyors of marine pathogens; (5) adapting epidemiological models to analysis of marine disease.

Frontiers in Ecology and the Environment

Bats and wind energy: a literature synthesis and annotated bibliography

Turbines have been used to harness energy from wind for hundreds of years. However, with growing concerns about climate change, wind energy has only recently entered the mainstream of global electricity production. Since early on in the development of wind-energy production, concerns have arisen about the potential impacts of turbines to wildlife; these concerns have especially focused on the mortality of birds. Despite recent improvements to turbines that have resulted in reduced mortality of birds, there is clear evidence that bat mortality at wind turbines is of far greater conservation concern. Bats of certain species are dying by the thousands at turbines across North America, and the species consistently affected tend to be those that rely on trees as roosts and most migrate long distances. Turbine-related bat mortalities are now affecting nearly a quarter of all bat species occurring in the United States and Canada. Most documented bat mortality at wind-energy facilities has occurred in late summer and early fall and has involved tree bats, with hoary bats ( Lasiurus cinereus ) being the most prevalent among fatalities. This literature synthesis and annotated bibliography focuses on refereed journal publications and theses about bats and wind-energy development in North America (United States and Canada). Thirty-six publications and eight theses were found, and their key findings were summarized. These publications date from 1996 through 2011, with the bulk of publications appearing from 2007 to present, reflecting the relatively recent conservation concerns about bats and wind energy. The idea for this Open-File Report formed while organizing a joint U.S. Fish and Wildlife Service/U.S. Geological Survey "Bats and Wind Energy Workshop," on January 25-26, 2012. The purposes of the workshop were to develop a list of research priorities to support decision making concerning bats with respect to siting and operations of wind-energy facilities across the United States. This document was intended to provide background information for the workshop participants on what has been published on bats and wind-energy issues in North America (United States and Canada).

Open-File Report

Science needs for determining the effects of climate change on harmful algal blooms in the southeastern United States

The Southeastern United States has many lakes, streams, and reservoirs that serve as important drinking water sources with recreational, agricultural, and ecological uses. However, harmful algal blooms (HABs) are becoming more common in these waters, causing health issues for humans and animals. HABs have been listed as a contaminant of emerging concern, and the magnitude, frequency, and duration of HABs appear to be increasing at the global scale. While it is well known that nutrients stimulate algae growth, it is not clear how climate change and other parameters stimulate the development of toxin production by HABs. The scientific literature describes parameters, such as storm occurrence, temperature, dissolved metals, erosion of soils, increasing length of growing season, discharge, and hydroperiod, that may affect algae growth and toxin production. Climate and hydrologic models address many of the physical and environmental parameters that influence HABs, but no climate models directly address HABs. This report compiles information from the existing literature pertaining to HABs and the modeling and forecasting of HABS. This compilation is done through the incorporation of climate change models. HAB research that involves climate change will require multiple disciplines that bring together ecologists, hydrologists, climatologists, engineers, economists, and new technology. Resource managers could use geographic data about the occurrence and distribution of HABs to develop models that identify waterbodies more vulnerable to HAB events. Development of such models will require teams capable of integrating biological, chemical, and physical factors. Model development will require additional research that can resolve anthropogenic and climate-related environmental factors to identify trends in freshwater HABs. The complexity and interconnectedness of the parameters that influence HAB occurrences will make model development challenging and require rigorous regional calibration.

Open-File Report

Summary of radiometric anomalies in Alaska

The gamma ray anomalies and their related geological settings shown on this map are a compilation from the NURE reconnaissance surveys (LKB Resources Inc., 1978a, 1978b, 1978c, 1979; Texas Instruments, Inc., 1977, 1978, U.S. Research and Development, 1976; Western Geophysical Company of American, 1980.)

Alaska

A review of remote sensing and grasslands literature

Studies between 1971 and 1980 dealing with remote sensing of rangelands/grasslands in the multispectral band are summarized and evaluated. Vegetation and soil reflectance properties are described. In the majority of the studies, the effect of the reflectance of green rangelands vegetation on the reflectance from the total scene is the primary concern. Developments in technique are summarized and recommendations for further research are presented.

Cooperator Report

Olympic Fisher Reintroduction Project: Progress report 2008-2011

This progress report summarizes the final year of activities of Phase I of the Olympic fisher restoration project. The intent of the Olympic fisher reintroduction project is to reestablish a self-sustaining population of fishers on the Olympic Peninsula. To achieve this goal, the Olympic fisher reintroduction project released 90 fishers within Olympic National Park from 2008 to 2010. The reintroduction of fishers to the Olympic Peninsula was designed as an adaptive management project, including the monitoring of released fishers as a means to (1) evaluate reintroduction success, (2) investigate key biological and ecological traits of fishers, and (3) inform future reintroduction, monitoring, and research efforts. This report summarizes reintroduction activities and preliminary research and monitoring results completed through December 2011. The report is non-interpretational in nature. Although we report the status of movement, survival, and home range components of the research, we have not completed final analyses and interpretation of research results. Much of the data collected during the monitoring and research project will be analyzed and interpreted in the doctoral dissertation being developed by Jeff Lewis; the completion of this dissertation is anticipated prior to April 2013. We anticipate that this work, and analyses of other data collected during the project, will result in several peer-reviewed scientific publications in ecological and conservation journals, which collectively will comprise the final reporting of work summarized here. These publications will include papers addressing post-release movements, survival, resource selection, food habits, and age determination of fishers.

Report

Report on geochemical characterisation of volcanic ash from Cumbre Vieja, La Palma, for the assessment of respiratory health hazard

Volcanic ash has several hazardous characteristics that may impact human and animal health. We report the results of a geochemical assessment of key hazardous characteristics of 16 volcanic ash samples erupted from Cumbre Vieja, La Palma, between 19 September – 16 October 2021. The analyses are an essential first step in assessing health risk from volcanic eruptions because they allow a rapid screening of the physicochemical characteristics that have the potential to cause harm. The report is in two sections: Part 1 presents analyses related to respiratory hazard, while Part 2 presents analyses relevant for contamination of drinking water and ingestion hazards for livestock. The main authors (Horwell, Damby & Stewart) are directors of the International Volcanic Health Hazard Network (www.ivhhn.org) and have conducted and published extensive research to develop and test techniques for rapid analysis of volcanic ash for health hazard assessment.

Cumbre Vieja, La Palma

Research opportunities in interdisciplinary ground-water science in the U.S. Geological Survey

This report is written for the scientifically literate reader but is not limited to those who are involved in ground-water science. The report is intended to encourage U.S. Geological Survey scientists to develop a sense of excitement about ground-water science in the agency, to inform scientists about existing and potential ground-water science opportunities, and to engage scientists and managers in interdisciplinary discussions and collaboration. The report is intended for use by U.S. Geological Survey and Department of the Interior management to formulate long-term ground-water science programs and to continue sustained support of ground-water monitoring and research, some of which may not have an immediate impact. Finally, the report can be used to communicate the U.S. Geological Survey's vision of ground-water science to Congress, partners, other agencies, and the research community at large with the goals of enhancing collaborative opportunities, sharing information, and maintaining dialogue regarding the directions of U.S. Geological Survey ground-water science.

Circular

Ten new insights in climate science 2025

Interdisciplinary understanding is vital for delivering sound climate policy advice. However, navigating the ever-growing and increasingly diverse scholarly literature on climate change is challenging for any individual researcher. This annual synthesis highlights and explains recent advances across a variety of fields of climate change research. This year, the 10 insights focus on: (1) the record-warmth of 2023/2024 and the elevated Earth energy imbalance; (2) acceleration of ocean warming and intensifying marine heatwaves; (3) northern land carbon sinks under strain; (4) reinforcing feedback between biodiversity loss and climate change; (5) accelerated depletion of groundwater; (6) global dengue incidence; (7) global income losses and labour productivity declines; (8) strategic scaling of CDR; (9) integrity challenges in carbon credit markets and emerging responses; and (10) effective policy mixes for emissions reductions. The insights have been written to be accessible to researchers from different fields, serving as entry-points to specific topics, as well as providing an overview of the evolving landscape of climate change research. In the final section, the insights are used to develop overarching policy-relevant messages. This paper provides the basis for a science-policy report that was shared with all Party delegations ahead of COP30 in Belém, Brazil.

Global Sustainability

Interactions among livestock grazing, vegetation type, and fire behavior in the Murphy Wildland Fire Complex in Idaho and Nevada, July 2007

A series of wildland fires were ignited by lightning in sagebrush and grassland communities near the Idaho-Nevada border southwest of Twin Falls, Idaho in July 2007. The fires burned for over two weeks and encompassed more than 650,000 acres. A team of scientists, habitat specialists, and land managers was called together by Tom Dyer, Idaho BLM State Director, to examine initial information from the Murphy Wildland Fire Complex in relation to plant communities and patterns of livestock grazing. Three approaches were used to examine this topic: (1) identify potential for livestock grazing to modify fuel loads and affect fire behavior using fire models applied to various vegetation types, fuel loads, and fire conditions; (2) compare levels of fuel consumed within and among major vegetation types; and (3) examine several observed lines of difference and discontinuity in fuel consumed to determine what factors created these contrasts. The team found that much of the Murphy Wildland Fire Complex burned under extreme fuel and weather conditions that likely overshadowed livestock grazing as a factor influencing fire extent and fuel consumption in many areas where these fires burned. Differences and abrupt contrast lines in the level of fuels consumed were affected mostly by the plant communities that existed on a site before fire. A few abrupt contrasts in burn severity coincided with apparent differences in grazing patterns of livestock, observed as fence-line contrasts. Fire modeling revealed that grazing in grassland vegetation can reduce surface rate of spread and fire-line intensity to a greater extent than in shrubland types. Under extreme fire conditions (low fuel moisture, high temperatures, and gusty winds), grazing applied at moderate utilization levels has limited or negligible effects on fire behavior. However, when weather and fuel-moisture conditions are less extreme, grazing may reduce the rate of spread and intensity of fires allowing for patchy burns with low levels of fuel consumption. The team suggested that targeted grazing to accomplish fuel objectives holds promise but requires detailed planning that includes clearly defined goals for fuel modification and appropriate monitoring to assess effectiveness. It was recommended that a pilot plan be devised to strategically place grazed blocks across a landscape to create fuel-reduction bands capable of influencing fire behavior. Also suggested was the development of a general technical report that highlights information and examples of how livestock grazing influences fire extent, severity, and intensity. Finally, the team encouraged continued research and monitoring of the effects of the Murphy Wildland Fire Complex. Much more can be learned from the effects of this extensive fire complex that may offer insight for future management decisions.

Open-File Report

Quality of life on the Colorado Plateau: A report to camera-survey collaborators in southeast Utah

What constitutes quality of life among community residents in southeastern and central Utah? What critical areas, elements, and special outdoor places are essential to quality of life in those areas? Answering these questions was the goal of this "quality-of-life" research collaboration in the Colorado Plateau region. Collaborators include the Utah Travel Council (UTC), Canyon Country Partnership, Utah State University, and the county governments of Carbon, Emery, Grand, San Juan, and Wayne counties. In recent years, the goal of the UTC has changed from simply encouraging tourism development to understanding the relationship between tourism and community quality of life. Elements of the new UTC mission include: “make Utah a better place to live by increasing the economic contribution of tourism,” and “protect base resources and maintain quality of life for residents and visitors alike” (Utah Division of Travel Development, 1997). The Social, Economic, and Institutional Analysis Section [SEIAS]/ Midcontinent Ecological Science Center/U.S. Geological Survey conducted this research in late spring through winter of 1997 in an effort to answer those questions posed by the collaboration. This report provides an overview of the research and presents summary results.

Utah

The Amphibian Research and Monitoring Initiative (ARMI): 5-year report

The Amphibian Research and Monitoring Initiative (ARMI) is an innovative, multidisciplinary program that began in 2000 in response to a congressional directive for the Department of the Interior to address the issue of amphibian declines in the United States. ARMI’s formulation was cross-disciplinary, integrating U.S. Geological Survey scientists from Biology, Water, and Geography to develop a course of action (Corn and others, 2005a). The result has been an effective program with diverse, yet complementary, expertise. ARMI’s approach to research and monitoring is multiscale. Detailed investigations focus on a few species at selected local sites throughout the country; monitoring addresses a larger number of species over broader areas (typically, National Parks and National Wildlife Refuges); and inventories to document species occurrence are conducted more extensively across the landscape. Where monitoring is conducted, the emphasis is on an ability to draw statistically defensible conclusions about the status of amphibians. To achieve this objective, ARMI has instituted a monitoring response variable that has nationwide applicability. At research sites, ARMI focuses on studying species/environment interactions, determining causes of observed declines, and developing new techniques to sample populations and analyze data. Results from activities at all scales are provided to scientists, land managers, and policymakers, as appropriate. The ARMI program and the scientists involved contribute significantly to understanding amphibian declines at local, regional, national, and international levels. Within National Parks and National Wildlife Refuges, findings help land managers make decisions applicable to amphibian conservation. For example, the National Park Service (NPS) selected amphibians as a vital sign for several of their monitoring networks, and ARMI scientists provide information and assistance in developing monitoring methods for this NPS effort. At the national level, ARMI has had major exposure at a variety of meetings, including a dedicated symposium at the 2004 joint meetings of the Herpetologists’ League, the American Society of Ichthyologists and Herpetologists, and the Society for the Study of Amphibians and Reptiles. Several principal investigators have brought international exposure to ARMI through venues such as the World Congress of Herpetology in South Africa in 2005 (invited presentation by Dr. Gary Fellers), the Global Amphibian Summit, sponsored by the International Union for Conservation of Nature (IUCN) and Wildlife Conservation International, in Washington, D.C., 2005 (invited participation by Dr. P.S. Corn), and a special issue of the international herpetological journal Alytes focused on ARMI in 2004 (edited by Dr. C.K. Dodd, Jr.). ARMI research and monitoring efforts have addressed at least 7 of the 21 Threatened and Endangered Species listed by the U.S. Fish and Wildlife Service (California red-legged frog [Rana draytonii], Chiricahua leopard frog [R. chiricahuensis], arroyo toad [Bufo californicus], dusky gopher frog [Rana sevosa], mountain yellow-legged frog [R. muscosa], flatwoods salamander [Ambystoma cingulatum], and the golden coqui [Eleutherodactylus jasperi]), and 9 additional species of concern recognized by the IUCN. ARMI investigations have addressed time-sensitive research, such as emerging infectious diseases and effects on amphibians related to natural disasters like wildfire, hurricanes, and debris flows, and the effects of more constant, environmental change, like urban expansion, road development, and the use of pesticides. Over the last 5 years, ARMI has partnered with an extensive list of government, academic, and private entities. These partnerships have been fruitful and have assisted ARMI in developing new field protocols and analytic tools, in using and refining emerging technologies to improve accuracy and efficiency of data handling, in conducting amphibian disease, malformation, and environmental effects research, and in implementing a network of monitoring and research sites. Accomplishments from these endeavors include more than 40 publications on amphibian status and trends, nearly 100 publications on amphibian ecology and causes of declines, and over 30 methodological publications. Several databases have emerged as a result of ARMI and its partnerships; one, a digital atlas of ranges for all U.S. amphibian species, was used by the IUCN to display amphibian distribution maps in the Global Amphibian Assessment Project. Given the scope of ARMI and the panoply of projects, findings have had implications for policy. Investigations that demonstrate amphibian declines or illuminate causes of declines provide valuable information about habitat management, environmental effects, mechanisms for the spread of disease, and human/amphibian interfaces. This information has been made available to land managers, scientists, educators, Congress and other policymakers, and the public. The support afforded ARMI by Congress has been influential in the program’s development and success. The value of ARMI’s efforts will continue to increase as we are able to extend our studies spatially and temporally to answer critical questions with more confidence. We are using ARMI’s resources efficiently and continuing to develop innovative mechanisms for leveraging resources for maximum effectiveness during challenging financial times. This report is a 5-year retrospective of the structure, methodology, progress, and contributions to the broader scientific community that have resulted from this national USGS program. We evaluate ARMI’s success to date, with regard to the challenges faced by the program and the strengths that have emerged. We chart objectives for the next 5 years that build on current accomplishments, highlight areas meriting further research, and direct efforts to overcome existing weaknesses.

Scientific Investigations Report

Water resources thesaurus: A vocabulary for indexing and retrieving the literature of water resources research and development

This Water Resources Thesaurus encompasses such broad research areas as the hydrologic cycle, supply of and demand for water, conservation and best use of available supplies of water, methods of increasing supplies, and the economic, legal, social, engineering, recreational, biological, geographical, ecological, and qualitative aspects of water resources. This volume represents a major revision of the previous edition of the Thesaurus, published in 1971. The principal source of terms for this edition has been the indexing used in Selected Water Resources Abstracts (SWRA). Since its inception in 1968, SWRA has indexed tens of thousands of publications. Its indexing terminology has been developed by expert abstracters and researchers, and represents the range of disciplines related to research, development, and management of water resources.

Monograph

Fish passage research: S.O. Conte Anadromous Fish Research Laboratory

The Leetown Science Center’s S.O. Conte Anadromous Fish Research Laboratory conducts basic and applied scientific studies of fish passage and migration to define underlying principles and relationships of fish behavior and hydraulics, and to develop integrated, predictive research that can be applied to a wide range of fish passage problems.

Fact Sheet

Chapter J: Issues and challenges in the application of geostatistics and spatial-data analysis to the characterization of sand-and-gravel resources

Sand-and-gravel (aggregate) resources are a critical component of the Nation's infrastructure, yet aggregate-mining technologies lag far behind those of metalliferous mining and other sectors. Deposit-evaluation and site-characterization methodologies are antiquated, and few serious studies of the potential applications of spatial-data analysis and geostatistics have been published. However, because of commodity usage and the necessary proximity of a mine to end use, aggregate-resource exploration and evaluation differ fundamentally from comparable activities for metalliferous ores. Acceptable practices, therefore, can reflect this cruder scale. The increasing use of computer technologies is colliding with the need for sand-and-gravel mines to modernize and improve their overall efficiency of exploration, mine planning, scheduling, automation, and other operations. The emergence of megaquarries in the 21st century will also be a contributing factor. Preliminary research into the practical applications of exploratory-data analysis (EDA) have been promising. For example, EDA was used to develop a linear-regression equation to forecast freeze-thaw durability from absorption values for Lower Paleozoic carbonate rocks mined for crushed aggregate from quarries in Oklahoma. Applications of EDA within a spatial context, a method of spatial-data analysis, have also been promising, as with the investigation of undeveloped sand-and-gravel resources in the sedimentary deposits of Pleistocene Lake Bonneville, Utah. Formal geostatistical investigations of sand-and-gravel deposits are quite rare, and the primary focus of those studies that have been completed is on the spatial characterization of deposit thickness and its subsequent effect on ore reserves. A thorough investigation of a gravel deposit in an active aggregate-mining area in central Essex, U.K., emphasized the problems inherent in the geostatistical characterization of particle-size-analysis data. Beyond such factors as common drilling methods jeopardizing the accuracy of the size-distribution curve, the application of formal geostatistical principles has other limitations. Many of the variables used in evaluating gravel deposits, including such sedimentologic parameters as sorting and such United Soil Classification System parameters as gradation coefficient, are nonadditive. Also, uniform sampling methods, such as drilling, are relatively uncommon, and sampling is generally accomplished by a combination of boreholes, water-well logs, test pits, trenches, stratigraphic columns from exposures, and, possibly, some geophysical cross sections. When evaluated in consideration of the fact that uniform mining blocks are also uncommon in practice, subsequent complexities in establishment of the volume/variance relation are inevitable. Several approaches exist to confront the limitations of geostatistical methods in evaluating sand-and-gravel deposits. Initially, we must acknowledge the practical requirements of the aggregate industry, as well as the limitations of the data collected by that industry, as a function of what the industry requires at the practical level, and consider that broader acceptance of formal geostatistics may require modifications of typical exploration and sampling protocols. Future investigations should utilize data from the full spectrum of sand-and-gravel deposits (flood plain, glacial, catastrophic flood, and marine), integrate such other disci plines as sedimentology and geophysics into the research, develop commodity-specific approaches to nonadditive variables, and include the results of comparative drilling.

Bulletin

Initial Everglades Depth Estimation Network (EDEN) digital elevation model research and development

The Everglades Depth Estimation Network (EDEN) offers a consistent and documented dataset that can be used to guide large-scale field operations, to integrate hydrologic and ecological responses, and to support biological and ecological assessments that measure ecosystem responses to the Comprehensive Everglades Restoration Plan (Telis, 2006). To produce historic and near-real time maps of water depths, the EDEN requires a system-wide digital elevation model (DEM) of the ground surface. Accurate Everglades wetland ground surface elevation data were non-existent before the U.S. Geological Survey (USGS) undertook the collection of highly accurate surface elevations at the regional scale. These form the foundation for EDEN DEM development. This development process is iterative as additional high accuracy elevation data (HAED) are collected, water surfacing algorithms improve, and additional ground-based ancillary data become available. Models are tested using withheld HAED and independently measured water depth data, and by using DEM data in EDEN adaptive management applications. Here the collection of HAED is briefly described before the approach to DEM development and the current EDEN DEM are detailed. Finally future research directions for continued model development, testing, and refinement are provided.

Florida

Monitoring wildlife for pesticide content

In May 1963, the President's Science Advisory Committee issued a report entitled Use of Pesticides . 17 the President already had requested the responsible federal agencies to implement the recommendations in the report. One of these recommendations was to provide for the development and coordination of a pesticide-monitoring program conducted on a continuing basis, by federal agencies to obtain timely systematic data on pesticide residues in the environment. Many people re engaged in research to learn the quantities of pesticide that may be hazardous. Yet there is concern that hazardous quantities may accumulate before the difficult task of evaluation can be completed. The President's report on environmental pollution 12 expresses the view that the soils and waters of the world cannot indefinitely provide a vast dumping ground to absorb and render harmless all human wastes. Chlorinated hydrocarbon pesticides are only one of these kinds of pollutants, yet they are particularly important because they persist long in the environment and accumulate in the tissues of animals.

National Academy of Sciences NRC Publication