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At least 163 records · Page 9Linked to original sources
USGS2015

Black-tailed and white-tailed jackrabbits in the American West: History, ecology, ecological significance, and survey methods

Across the western United States, Leporidae are the most important prey item in the diet of Golden Eagles ( Aquila chrysaetos ). Leporids inhabiting the western United States include black-tailed ( Lepus californicus ) and white-tailed jackrabbits ( Lepus townsendi i) and various species of cottontail rabbit ( Sylvilagus spp.). Jackrabbits ( Lepus spp.) are particularly important components of the ecological and economic landscape of western North America because their abundance influences the reproductive success and population trends of predators such as coyotes ( Canis latrans ), bobcats ( Lynx rufus ), and a number of raptor species. Here, we review literature pertaining to black-tailed and white-tailed jackrabbits comprising over 170 published journal articles, notes, technical reports, conference proceedings, academic theses and dissertations, and other sources dating from the late 19th century to the present. Our goal is to present information to assist those in research and management, particularly with regard to protected raptor species (e.g., Golden Eagles), mammalian predators, and ecological monitoring. We classified literature sources as (1) general information on jackrabbit species, (2) black-tailed or (3) white-tailed jackrabbit ecology and natural history, or (4) survey methods. These categories, especially 2, 3, and 4, were further subdivided as appropriate. The review also produced several tables on population trends, food habits, densities within various habitats, and jackrabbit growth and development. Black-tailed and white-tailed jackrabbits are ecologically similar in general behaviors, use of forms, parasites, and food habits, and they are prey to similar predators; but they differ in their preferred habitats. While the black-tailed jackrabbit inhabits agricultural land, deserts, and shrublands, the white-tailed jackrabbit is associated with prairies, alpine tundra, and sagebrush-steppe. Frequently considered abundant, jackrabbit numbers in western North America fluctuate temporally and spatially. We also reviewed methods used to investigate jackrabbit populations, including spotlight line transects, flushing transects, drive counts, pellet plot counts, collections, roadside counts, mark-recapture studies, and radio-telemetry studies. Our review of jackrabbit literature illustrates a number of deficiencies in our understanding of jackrabbits in general. As an example, a detailed quantitative description of habitat preferences is lacking, as is a thorough understanding of sympatric jackrabbit species interactions. Even the existence of the oft-cited jackrabbit “cycle” is a matter of debate. Survey methods generally do not address efficacy or accuracy in measuring jackrabbit density or abundance. In addition, there is a paucity of information about jackrabbits in the Mojave Desert, with no real understanding of home ranges, habitat preferences, and population dynamics or demographics in this region.

Arizona, California, Colorado, Idaho, Iowa, Kansas↗
USGS2016

SNP discovery in candidate adaptive genes using exon capture in a free-ranging alpine ungulate

Identification of genes underlying genomic signatures of natural selection is key to understanding adaptation to local conditions. We used targeted resequencing to identify SNP markers in 5321 candidate adaptive genes associated with known immunological, metabolic and growth functions in ovids and other ungulates. We selectively targeted 8161 exons in protein-coding and nearby 5′ and 3′ untranslated regions of chosen candidate genes. Targeted sequences were taken from bighorn sheep ( Ovis canadensis ) exon capture data and directly from the domestic sheep genome ( Ovis aries v. 3; oviAri3). The bighorn sheep sequences used in the Dall's sheep ( Ovis dalli dalli ) exon capture aligned to 2350 genes on the oviAri3 genome with an average of 2 exons each. We developed a microfluidic qPCR-based SNP chip to genotype 476 Dall's sheep from locations across their range and test for patterns of selection. Using multiple corroborating approaches ( lositan and bayescan ), we detected 28 SNP loci potentially under selection. We additionally identified candidate loci significantly associated with latitude, longitude, precipitation and temperature, suggesting local environmental adaptation. The three methods demonstrated consistent support for natural selection on nine genes with immune and disease-regulating functions (e.g. Ovar-DRA, APC, BATF2, MAGEB18), cell regulation signalling pathways (e.g. KRIT1, PI3K, ORRC3), and respiratory health (CYSLTR1). Characterizing adaptive allele distributions from novel genetic techniques will facilitate investigation of the influence of environmental variation on local adaptation of a northern alpine ungulate throughout its range. This research demonstrated the utility of exon capture for gene-targeted SNP discovery and subsequent SNP chip genotyping using low-quality samples in a nonmodel species.

Molecular Ecology Resources↗
USGS2022

Field testing a high-frequency acoustic attenuation system for measuring fine suspended sediments and algal movements

Acoustic measurements of suspended sediment have the potential to allow remote, autonomous monitoring of sediment movements at much higher temporal resolution than traditional manual sampling methods. Although suspended sands present a challenging measurement problem due to their logarithmic distribution with depth, fine clay sediments are distributed evenly throughout a stream cross section, making them amenable to point measurements. In order to improve measurement capabilities for fine sediments in stream channels, The National Center for Physical Acoustics at The University of Mississippi has developed a remote, autonomous acoustic system to monitor fine sediments transported in streams. The system was tested on the Middle Rio Grande near San Acacia, New Mexico, and in Goodwin Creek in Panola County, Mississippi. The acoustic instruments were compared to sediment concentrations from physical samples in both deployments. Diurnal patterns were found in the acoustic signals from the Middle Rio Grande, and a follow up experiment at The University of Mississippi Biological Field Station was used to investigate the potential effects of algal biomass on acoustic attenuation measurements. The results showed diurnal patterns in attenuation were associated with patterns in light, temperature, and dissolved oxygen. These results combined with information from the literature indicate diel movement of algal colonies in the water column of some water bodies may interfere with high-frequency acoustic measurements in natural environments and that acoustic methods have the potential to allow ecological researchers to evaluate mass algal movements in the field. Results from Goodwin Creek demonstrate that the acoustic system is able to provide measurements of sediment concentration with high temporal resolution that track well with expected sediment transport patterns in response to discharge hydrographs.

Applied Acoustics↗
USGS1997

Natural attenuation of chlorinated volatile organic compounds in a freshwater tidal wetland, Aberdeen Proving Ground, Maryland

Ground-water contaminant plumes that are flowing toward or currently discharging to wetland areas present unique remediation problems because of the hydrologic connections between ground water and surface water and the sensitive habitats in wetlands. Because wetlands typically have a large diversity of microorganisms and redox conditions that could enhance biodegradation, they are ideal environments for natural attenuation of organic contaminants, which is a treatment method that would leave the ecosystem largely undisturbed and be cost effective. During 1992-97, the U.S. Geological Survey investigated the natural attenuation of chlorinated volatile organic compounds (VOC's) in a contaminant plume that discharges from a sand aquifer to a freshwater tidal wetland along the West Branch Canal Creek at Aberdeen Proving Ground, Maryland. Characterization of the hydrogeology and geochemistry along flowpaths in the wetland area and determination of the occurrence and rates of biodegradation and sorption show that natural attenuation could be a feasible remediation method for the contaminant plume that extends along the West Branch Canal Creek. The aquifer, which received contaminants in the past from sources that were located upgradient of the current eastern boundary of the wetland, is about 40 to 45 feet thick in the study area. The overlying wetland sediments consist of two distinct layers that have a combined thickness of about 6 to 12 feet--an upper unit of peat and a lower unit of silty to sandy clay or clayey sand. Head distributions show strong vertical gradients, and flow directions are predominantly upward through the wetland sediments. Tidal fluctuations, however, cause some reversals in ground-water-flow directions and changes in discharge locations, which affect the distribution and transport of contaminants. The average linear velocity of ground water is estimated to be about 2 to 3 feet per year along vertical flow lines in the wetland area, and the total ground-water discharge along a 1-foot-wide strip of the wetland extending from the eastern wetland boundary to the creek is in the range of 0.13 to 0.25 feet squared per day. The major parent contaminants in the aquifer were trichloroethylene (TCE); 1,1,2,2-tetrachloroethane (PCA); carbon tetrachloride (CT); and chloroform (CF). The aquifer was typically aerobic, but ground water in the wetland sediments became increasingly anaerobic along the upward flow direction. Iron-reducing conditions were predominant in the lower wetland sediment unit composed of clayey sand and silt, and methanogenesis was predominant in an upper unit composed of peat. Total concentrations of VOC's and the relative proportions of parent compounds to anaerobic daughter products changed substantially as the contaminants were transported upward through these changing redox environments. Concentrations of the parent compounds TCE and PCA ranged from about 100 to 2,000 micrograms per liter in the aquifer beneath the wetland, whereas concentrations of daughter products were low or undetectable. In contrast, the parent compounds commonly were not detected in ground water in the wetland sediments, but the daughter compounds 1,2- dichloro-ethylene (12DCE), vinyl chloride (VC), 1,1,2-trichloroethane (112TCA), and 1,2-dichloroethane (12DCA) were observed. 12DCE and VC were the dominant daughter products in the wetland sediments, even where PCA was the primary parent contaminant discharging to the wetland. The presence of these daughter products in water in the wetland sediments indicates that TCE and PCA are degraded by reductive dechlorination reactions in the naturally anaerobic wetland sediments. Although production of daughter products was observed, total concentrations of the VOC's decreased upward through the 6- to 12-feet-thick wetland sediments and were less than 5 micrograms per liter near the surface. The daughter products are apparently further degraded by these anaerobic processes to non-chlorinated, non-toxic endproducts, or are removed by other attenuation processes such as aerobic degradation or volatilization. Several sets of anaerobic microcosms, some amended with TCE concentrations of 400 or 990 micrograms per liter (3.0 or 7.5 micromoles per liter) and one amended with PCA concentration of 480 micrograms per liter (2.9 micromoles per liter), were constructed in the laboratory using wetland sediment and ground water from the study area. These microcosm experiments confirmed field observations that 12DCE and VC are the dominant daughter products from anaerobic biodegradation of both TCE and PCA. Production of 112TCA and 12DCA also was observed in the PCA-amended microcosms, but concentrations were lower than those of 12DCE and VC. These results indicate that degradation of PCA occurs through both hydrogenolysis and dichloroelimination pathways under anaerobic conditions. Daughter products were not observed in sterile controls, except for relatively low concentrations of 12DCE in the PCA-amended controls, suggesting that the reactions were predominantly microbially mediated. Parent and daughter concentrations in the microcosms decreased to less than 5 micrograms per liter in less than 34 days under methanogenic conditions, thus showing extremely rapid biodegradation rates in these organic-rich wetland sediments. Maximum potential rate constants for biodegradation of TCE and PCA, which were calculated from the microcosm exper-iments assuming first-order degradation rates, ranged from 0.10 to 0.31 per day under methanogenic conditions, corresponding to half-lives of 2 to 7 days. The rate constant for TCE biodegradation under sulfate-reducing conditions was 0.045 West Branch, Aberdeen Proving Ground, Maryland 3 per day (half-life of 15 days), which is lower than under methanogenic conditions. These estimated rate constants for the wetland sediments are two to three orders of magnitude higher than those reported in the literature for TCE biodegradation in microcosms constructed with sandy aquifer sediments. Aerobic biodegradation rates for cis-12DCE, trans-12DCE, and VC were in the same range as those measured for TCE and PCA under anaerobic conditions in microcosm experiments. Thus, production of these daughter products by anaerobic biodegradation of TCE and PCA could be balanced by their consumption where oxygen is available in the wetland sediment, such as near roots and land surface. In the aerobic microcosm experiments, biodegradation of cis-12DCE, trans-12DCE, and VC occurred only if methane consumption occurred, indicating that methanotrophs were involved in the process. Aerobic biodegradation was fastest for vinyl chloride and slowest for TCE in the microcosm experiments. These results agree with other laboratory and field studies that have shown faster degradation by methane-utilizing cultures when the compounds are less halogenated. Equilibrium sorption isotherms were measured in 24-hour batch tests and used to estimate distribution coefficients ( K d 's) to describe the ratios of sorbed to aqueous concentrations of PCA and the daughter products cis-12DCE, trans-12DCE, and VC. The estimated K d's for PCA, cis-12DCE, trans-12DCE, and VC were about 2.3, 1.8, 2.4, and 1.3 liters per kilogram of sediment, respectively. Sorbed concentrations of PCA, cis-12DCE, and trans-12DCE in the wetland sediments, therefore, would be expected to be about twice the concentration measured in the water, whereas sorbed concentrations of VC would not be much greater than the aqueous concentrations. Coefficients of retardation, which were calculated using the K d 's and an advective flow velocity of about 2 feet per year, indicate that sorption alone would cause the movement of the contaminants in the wetland sediments to be 6 to 10 times slower than the advective ground-water flow. Biodegradation and sorption, therefore, are significant natural attenuation mechanisms for chlorinated hydrocarbons in these wetland sediments. The relatively thin layers of wetland sediments are critical in reducing contaminant concentrations and toxicity of the ground water before it discharges to the wetland surface and the creek, and natural attenuation in the wetland sediments could be an effective remediation method for the ground-water contaminants.

Maryland↗
USGS2017

Probabilistic tsunami hazard analysis: Multiple sources and global applications

Applying probabilistic methods to infrequent but devastating natural events is intrinsically challenging. For tsunami analyses, a suite of geophysical assessments should be in principle evaluated because of the different causes generating tsunamis (earthquakes, landslides, volcanic activity, meteorological events, and asteroid impacts) with varying mean recurrence rates. Probabilistic Tsunami Hazard Analyses (PTHAs) are conducted in different areas of the world at global, regional, and local scales with the aim of understanding tsunami hazard to inform tsunami risk reduction activities. PTHAs enhance knowledge of the potential tsunamigenic threat by estimating the probability of exceeding specific levels of tsunami intensity metrics (e.g., run-up or maximum inundation heights) within a certain period of time (exposure time) at given locations (target sites); these estimates can be summarized in hazard maps or hazard curves. This discussion presents a broad overview of PTHA, including (i) sources and mechanisms of tsunami generation, emphasizing the variety and complexity of the tsunami sources and their generation mechanisms, (ii) developments in modeling the propagation and impact of tsunami waves, and (iii) statistical procedures for tsunami hazard estimates that include the associated epistemic and aleatoric uncertainties. Key elements in understanding the potential tsunami hazard are discussed, in light of the rapid development of PTHA methods during the last decade and the globally distributed applications, including the importance of considering multiple sources, their relative intensities, probabilities of occurrence, and uncertainties in an integrated and consistent probabilistic framework.

Reviews of Geophysics↗
USGS2013

Direct estimation of diffuse gaseous emissions from coal fires: current methods and future directions

Coal fires occur in nature spontaneously, contribute to increases in greenhouse gases, and emit atmospheric toxicants. Increasing interest in quantifying coal fire emissions has resulted in the adaptation and development of specialized approaches and adoption of numerical modeling techniques. Overview of these methods for direct estimation of diffuse gas emissions from coal fires is presented in this paper. Here we take advantage of stochastic Gaussian simulation to interpolate CO 2 fluxes measured using a dynamic closed chamber at the Ruth Mullins coal fire in Perry County, Kentucky. This approach allows for preparing a map of diffuse gas emissions, one of the two primary ways that gases emanate from coal fires, and establishing the reliability of the study both locally and for the entire fire. Future research directions include continuous and automated sampling to improve quantification of gaseous coal fire emissions.

International Journal of Coal Geology↗
USGS2017

Building a state-space life cycle model for naturally produced Snake River fall Chinook salmon

In 1992, Snake River basin fall Chinook salmon (Oncorhynchus tshawytscha) were listed for protection under the U.S. Endangered Species Act (NMFS 1992) and the population remained below 1000 individuals until 2000. Since then, returns from natural production has rebounded to over 20,000 spawners owing to a host of factors including reduced harvest (Peters et al. 2001), stable minimum spawning flows (Groves and Chandler 1999), summer flow augmentation (Connor et al. 2003), predator control (Beamesderfer et al. 1996), hatchery supplementation (Rosenberger et al. 2017), improved juvenile passage structures (Adams et al. 2014), summer spill operations (Perry et al. 2006; Adams et al. 2008), and periods of favorable ocean conditions and food availability (Logerwell et al. 2003; Peterson et al. 2014). Given this change in abundance coincident with numerous management actions and fluctuation in environmental drivers, quantifying which factors contributed to the observed rebound in natural production can provide critical insights into future management actions for this at-risk population. Multistage life cycle models provide a powerful analytical framework for understating how each life stage of a population contributes to population growth rate (Moussalli and Hilborn 1986; Greene and Beechie 2004). Multistage models may also be used as an analytical framework to explicitly estimate demographic parameters of a population model. This approach has an advantage over single-stage stock-recruitment models by allowing population growth rates to be partitioned among life stages rather than aggregated over an entire life cycle. Such partitioning allows for estimating 1) stage-specific density dependence, and 2) stage-specific effects of environmental factors or management actions. For example, Zabel et al. (2006) estimated parameters of a multistage model used in the context of a population viability analysis for spring/summer Chinook salmon in the Snake River, but such an approach has yet to be applied to fall Chinook salmon in the Snake River basin. Typically, data informing estimates of abundance at particular “check points” in the life cycle determines the complexity of the multistage model that can be fit to the data. For fall Chinook salmon, we are developing a two-stage model that encompasses: 1) upstream passage of spawners at Lower Granite Dam (LGR) to the subsequent downstream passage of their progeny at the dam, and 2) downstream passage of juveniles at LGR to their subsequent return from the ocean and passage at the Dam 2‒6 years later. This approach partitions the life cycle of fall Chinook salmon both spatially and temporally, which allows us to fit and compare alternative models with covariates specific to each stage. Our previous report to the ISAB (Zabel et al. 2013) detailed methods for estimating abundance of naturally produced adults and juveniles passing Lower Granite Dam, which provides the requisite data for fitting a two-stage model. The intent of this report is to describe the structure of the two-stage life cycle model, present preliminary results from fitting the model to data, and outline future directions and developments. As is clear from the diversity of models presented in this report, “life cycle models” range from very simple theoretically based population models (e.g., the Beverton-Holt stock- recruitment model) to very complex spatially explicit simulation models linked to hydrosystem hydrodynamic models (e.g., the COMPASS model for a single transition in a life cycle model, Zabel et al. 2008). We chose to develop a model of intermediate complexity that casts the two- stage life cycle model in a state-space framework (Newman et al. 2014). We chose to use a state-space framework implemented in a Bayesian framework because: • It provides both a statistical estimation framework for retrospective statistical analysis and a stochastic simulation framework for prospective analysis to evaluate alternative management actions. • Abundance estimates are uncertain. A state-space framework accounts for observation uncertainty in the abundance estimates and other data (e.g., age structure) while simultaneously estimating process uncertainty. • It allows for missing data. By drawing missing data from an appropriate probability model, uncertainty owing to missing data can be propagated without having to omit data or assume fixed values for missing data. Thus, a two-stage state-space life cycle model for fall Chinook salmon strikes an appropriate balance between model complexity, tractability, and applicability given the goals of performing both retrospective and prospective analysis to guide future management of this population.

Idaho, Oregon, Washington, Wyoming↗
USGS2013

Capture-recapture methodology

Capture-recapture methods were initially developed to estimate human population abundance, but since that time have seen widespread use for fish and wildlife populations to estimate and model various parameters of population, metapopulation, and disease dynamics. Repeated sampling of marked animals provides information for estimating abundance and tracking the fate of individuals in the face of imperfect detection. Mark types have evolved from clipping or tagging to use of noninvasive methods such as photography of natural markings and DNA collection from feces. Survival estimation has been emphasized more recently as have transition probabilities between life history states and/or geographical locations, even where some states are unobservable or uncertain. Sophisticated software has been developed to handle highly parameterized models, including environmental and individual covariates, to conduct model selection, and to employ various estimation approaches such as maximum likelihood and Bayesian approaches. With these user-friendly tools, complex statistical models for studying population dynamics have been made available to ecologists. The future will include a continuing trend toward integrating data types, both for tagged and untagged individuals, to produce more precise and robust population models.

Book chapter↗
USGS2021

Using landscape metrics to characterize towns along an urban-rural gradient

Context Urban-rural gradients are useful tools when examining the influence of human disturbances on ecological, social and coupled systems, yet the most commonly used gradient definitions are based on single broad measures such as housing density or percent forest cover that fail to capture landscape patterns important for conservation. Objectives We present an approach to defining urban–rural gradients that integrates multiple landscape pattern metrics related to ecosystem processes important for natural resources and wildlife sustainability. Methods We develop a set of land cover composition and configuration metrics and then use them as inputs to a cluster analysis process that, in addition to grouping towns with similar attributes, identifies exemplar towns for each group. We compare the outcome of the cluster-based urban-rural gradient typology to outcomes for four commonly-used rule-based typologies and discuss implications for resource management and conservation. Results The resulting cluster-based typology defines five town types (urban, suburban, exurban, rural, and agricultural) and notably identifies a bifurcation along the gradient distinguishing among rural forested and agricultural towns. Landscape patterns (e.g., core and islet forests) influence where individual towns fall along the gradient. Designations of town type differ substantially among the five different typologies, particularly along the middle of the gradient. Conclusions Understanding where a town occurs along the urban-rural gradient could aid local decision-makers in prioritizing and balancing between development and conservation scenarios. Variations in outcomes among the different urban-rural gradient typologies raise concerns that broad-measure classifications do not adequately account for important landscape patterns. We suggest future urban-rural gradient studies utilize more robust classification approaches.

Connecticut. Maine, Massachusetts, New Hampshire, ↗
USGS1992

Laser microprobe analyses of noble gas isotopes and halogens in fluid inclusions: Analyses of microstandards and synthetic inclusions in quartz

Ar, Kr, Xe, Cl, Br, I, and K abundances and isotopic compositions have been measured in microscopic fluid inclusions in minerals by noble gas mass spectrometry following neutron irradiation and laser extraction. The laser microprobe noble gas mass spectrometric (LMNGMS) technique was quantified by use of microstandards, including air-filled capillary tubes, synthetic basalt glass grains, standard hornblende grains, and synthetic fluid inclusions in quartz. Common natural concentrations of halogens (Cl, Br, and I) and noble gases (Ar and Kr) in trapped groundwaters and hydrothermal fluids can be analyzed simultaneously by LMNGMS in as little as 10 −11 L of inclusion fluid, with accuracy and precision to within 5–10% for element and isotope ratios. Multicomponent element and isotope correlations indicate contaminants or persistent reservoirs of excess Xe and/or unfractionated air in some synthetic and natural fluid inclusion samples. LMNGMS analyses of natural fluid inclusions using the methods and calibrations reported here may be used to obtain unique information on sources of fluids, sources of fluid salinity, mixing, boiling (or unmixing), and water-rock interactions in ancient fluid flow systems.

Geochimica et Cosmochimica Acta↗
USGS2009

Predicting bed shear stress and its role in sediment dynamics and restoration potential of the Everglades and other vegetated flow systems

Entrainment of sediment by flowing water affects topography, habitat suitability, and nutrient cycling in vegetated floodplains and wetlands, impacting ecosystem evolution and the success of restoration projects. Nonetheless, restoration managers lack simple decision-support tools for predicting shear stresses and sediment redistribution potential in different vegetation communities. Using a field-validated numerical model, we developed state-space diagrams that provide these predictions over a range of water-surface slopes, depths, and associated velocities in Everglades ridge and slough vegetation communities. Diminished bed shear stresses and a consequent decrease in bed sediment redistribution are hypothesized causes of a recent reduction in the topographic and vegetation heterogeneity of this ecosystem. Results confirmed the inability of present-day flows to entrain bed sediment. Further, our diagrams showed bed shear stresses to be highly sensitive to emergent vegetation density and water-surface slope but less sensitive to water depth and periphyton or floating vegetation abundance. These findings suggested that instituting a pulsing flow regime could be the most effective means to restore sediment redistribution to the Everglades. However, pulsing flows will not be sufficient to erode sediment from sloughs with abundant spikerush, unless spikerush density first decreases by natural or managed processes. Our methods provide a novel tool for identifying restoration parameters and performance measures in many types of vegetated aquatic environments where sediment erosion and deposition are involved.

Ecological Engineering↗
USGS2026

Spatial variation in effectiveness and costs of sagebrush restoration treatments across the western United States

Natural resource managers strive to improve restoration efficiency across the vast network of public lands of the United States, seeking the best return on investment through innovation, geographic prioritization, and adaptive management. This challenge is exemplified by ecosystems dominated by sagebrush ( Artemisia spp.), which occur across the western United States and have been degraded by increasing wildfire frequency driven by invasive plant spread, among other factors. However, both costs and effectiveness of sagebrush restoration can vary spatially due to management practices in addition to biotic and abiotic factors, and characterizing this variation could inform broad-scale planning. We leveraged published models of sagebrush recovery and treatment costs to predict and evaluate cost-effectiveness of aerial and drill seeding Artemisia spp. across 429 718 km 2 that overlapped 12 US states. Compared to natural recovery, effectiveness for both methods was generally low, yet effectiveness was often greater, and costs were always greater, for drill than aerial seeding, resulting in slightly higher cost-effectiveness on average for drill seeding. Cost-effectiveness for both treatments increased near major roads and in areas with more repeated burns. Cost-effectiveness also increased with predisturbance cover of sagebrush but decreased with herbaceous cover. However, we also identified areas where aerial seeding was more cost-effective than drill seeding, particularly with greater slope. Our results provide spatially explicit estimates and potential mechanisms of cost-effectiveness for two common seeding methods for sagebrush, which can help prioritize limited resources, guide land use, and improve restoration efficiency and effectiveness across public rangelands of the western United States.

western United States↗
USGS2020

Estimation of nonlinear water-quality trends in high-frequency monitoring data

Recent advances in high-frequency water-quality sensors have enabled direct measurements of physical and chemical attributes in rivers and streams nearly continuously. Water-quality trends can be used to identify important watershed-scale changes driven by natural and anthropogenic influences. Statistical methods to estimate trends using high-frequency data are lacking. To address this gap, an evaluation of the generalized additive model (GAM) approach to test for trends in high-frequency data was conducted. Our proposed framework includes methods for handling serial correlation, trend estimation and slope-change detection, and trend interpretation at arithmetic scale for log-transformed variables. Water-temperature and turbidity data, representing two analytes with different temporal patterns, collected from the James River at Cartersville, Virginia, USA, were chosen for this analysis. Results indicated that the model, including flow, season, time covariates, and interaction between flow and season performed well for both analytes. The same model structure was applied to specific conductance data, collected from a small highly urbanized watershed, with satisfactory model performance. The water temperature GAM results indicated that the significant decreasing-then-increasing patterns after 2012 were mainly driven by air temperature changes. The turbidity trend was not significant over time. The specific conductance results showed a consistently upward trend over the last decade due to ever-increasing urbanization in the small watershed. This study suggests that the GAM method has great potential as a useful tool for trend analysis on high-frequency data, and for informing watershed managers of hydro-climatic and human influences on water quality by detecting crucial signal variation over time.

Chesapeake Bay watershed↗
USGS2015

Production of greenhouse-grown biocrust mosses and associated cyanobacteria to rehabilitate dryland soil function

Mosses are an often-overlooked component of dryland ecosystems, yet they are common members of biological soil crust communities (biocrusts) and provide key ecosystem services, including soil stabilization, water retention, carbon fixation, and housing of N 2 fixing cyanobacteria. Mosses are able to survive long dry periods, respond rapidly to precipitation, and reproduce vegetatively. With these qualities, dryland mosses have the potential to be an excellent dryland restoration material. Unfortunately, dryland mosses are often slow growing in nature, and ex situ cultivation methods are needed to enhance their utility. Our goal was to determine how to rapidly produce, vegetatively, Syntrichia caninervis and S. ruralis , common and abundant moss species in drylands of North America and elsewhere, in a greenhouse. We manipulated the length of hydration on a weekly schedule (5, 4, 3, or 2 days continuous hydration per week), crossed with fertilization (once at the beginning, monthly, biweekly, or not at all). Moss biomass increased sixfold for both species in 4 months, an increase that would require years under dryland field conditions. Both moss species preferred short hydration and monthly fertilizer. Remarkably, we also unintentionally cultured a variety of other important biocrust organisms, including cyanobacteria and lichens. In only 6 months, we produced functionally mature biocrusts, as evidenced by high productivity and ecosystem-relevant levels of N 2 fixation. Our results suggest that biocrust mosses might be the ideal candidate for biocrust cultivation for restoration purposes. With optimization, these methods are the first step in developing a moss-based biocrust rehabilitation technology.

Restoration Ecology↗
USGS2000

Progression and severity of gas bubble trauma in juvenile salmonids

We conducted laboratory experiments to assess the progression and to quantify the severity of signs of gas bubble trauma (GBT) in juvenile chinook salmon Oncorhynchus tshawytscha and steelhead Oncorhynchus mykiss exposed to different levels of total dissolved gas (TDG), and we attempted to relate these signs to the likelihood of mortality. When fish were exposed to 110% TDG for up to 22 d, no fish died, and there were few signs of GBT in the lateral line or gills. Bubbles in the fins, however, were relatively common, and they progressively worsened over the experimental period. When fish were exposed to 120% TDG for up to 140 h, chinook salmon had an LT20 (time necessary to kill 20% of the fish) ranging from 40 to 120 h, whereas steelhead had LT20s ranging from 20 to 35 h. In steelhead, bubbles in the lateral line, fins, and gills displayed poor trends of worsening over time, showed substantial interindividual variability, and were poorly related to mortality. In chinook salmon, only bubbles in the lateral line showed a distinct worsening over time, and the severity of bubbles in the lateral line was highly correlated with mortality. When fish were exposed to 130% TDG for up to 11 h, LT20s for chinook salmon ranged from 3 to 6 h, whereas those for steelhead ranged from 5 to 7 h. In chinook salmon, bubbles in the lateral line and fins, but not those in the gills, showed distinct trends of worsening over time. In steelhead, bubbles in the lateral line displayed the most significant trend of progressive severity. In both species at 130% TDG, the severity of all GBT signs was highly correlated with mortality. The progressive nature of GBT and the methods we developed to examine fish for GBT may be useful for monitoring programs that aim to assess the severity of dissolved gas supersaturation exposures experienced by fish in the wild. However, the efficacy of such programs seems substantially hindered by problems associated with (1) the variable persistence of GBT signs; (2) the inconsistent relation of GBT signs to mortality; (3) the insufficient knowledge of the relation between exposure history and GBT sign development for fish in the wild; and (4) an extreme amount of interindividual variation in terms of susceptibility to GBT.

Transactions of the American Fisheries Society↗
USGS1978

Program for evaluating stream quality in North Carolina

The design and objectives of the program for evaluating stream quality in North Carolina are described. Using water-quality and streamflow data collected since the 1940's, a study is underway to define certain variations in water quality, to quantify the effects of man 's activities on water quality, and to determine long-term trends at key locations on the State 's major river. Data collected from 47 unpolluted stream sites were used to estimate average concentrations for naturally occurring constituents during periods of high and low flow. Methods are described for estimating constituent loads derived from both natural sources and sources of pollution. (Woodard-USGS)

North Carolina↗
USGS1978

Reconnaissance engineering geology of the Petersburg area, southeastern Alaska, with emphasis on geologic hazards

A program to study the engineering geology of most larger Alaska coastal communities and to evaluate their earthquake and other geologic hazards was started following the 1964 Alaska earthquake; this report about the Petersburg area is a product of that program. Field-study methods were of a reconnaissance nature, and thus, interpretations in the report are tentative. Landscape of the northern end of Mitkof Island on which Petersburg is situated is characterized by a gently sloping, muskeg-covered terrain, with altitudes mostly less than 30 m. In contrast, much of the rest of the island is composed of mountainous terrain with many steep valleys. During the Pleistocene Epoch, the Petersburg area presumably was covered by ice several times; glaciers deeply eroded many valleys on Mitkof Island and adjacent areas. The last major deglaciation probably was largely completed by 12,000 years ago. Delayed rebound of the earth's crust, after the melting of large amounts of ice, permitted extensive inundation of land in the Petersburg area. Subsequently, emergence has elevated marine deposits to a present-day altitude of at least 65 m and probably to 75 m. Bedrock in the Petersburg map area is composed of relatively hard metamorphic rocks, chiefly phyllite and probably some graywacke. Rocks are of Middle(?) Jurassic to Early Cretaceous age. Five types of surficial geologic material of Quaternary age were recognized: (1) mixed deposits consisting of diamicton, silt-clay, and sand or sandy pebble gravel, (2) alluvial deposits, (3) shore and delta deposits, (4) organic deposits, and (5) artificial fill. Geologic structure in southeastern Alaska is complex because several cycles of tectonic deformation since at least early Paelozoic time have affected different parts of the region. The latest of the major tectonic events in southeastern Alaska occurred in Tertiary time, with some minor activity continuing into the Quaternary Period. Along the outer coast of southeastern Alaska, active strike-slip movement is occurring along the Chichagof-Baranof and Queen Charlotte faults. A segment of the prominent Coast-Range lineament, part of which may be a fault, lies 18 km northeast of Petersburg. Many earthquakes occur along the outer coast of southeastern Alaska. Most of these shocks are associated with movements along the Chichagof-Baranof, Queen Charlotte, and Transition faults. A few small earthquakes occur in the region between the outer coast and the southern part of the Coast Mountains. 0nly a few earthquakes have been recorded as felt at Petersburg; these shocks and others possibly felt in the Petersburg region are tabulated. Among the recorded earthquakes the highest intensity (about V-VI) as the magnitude 7.1 earthquake of October 24, 1927, that occurred probably along the Chichagof-Baranof fault, and about 225 km northwest of Petersburg; damage was reported as minor. Other large earthquakes along the Chichagof-Baranof fault that affected or probably affected the Petersburg area in a minor way occurred on August 22, 1949 (magnitude 8.1) and on July 30, 1972 (magnitude 7.25). From a consideration of the tectonics and earthquake history of the region, earthquakes similar to the 1927, 1949, and 1972 shocks are expected to recur on segments of the Chichagof-Baranof or Queen Charlotte faults. The closest of these fault segments is about 170 km southwest from Petersburg. The likelihood of destructive earthquakes being generated along faults closer to Petersburg is unknown. A very generalized discussion of possible geologic effects that could occur in the area during a postulated, theoretically reasonable worst case earthquake of magnitude 8 occurring along the outer coast about 170 km southwest from Petersburg notes that ground shaking probably would be strongest on organic deposits and least on bedrock and on firm, compact diamicton. Among other effects that could happen are: (1) liquefaction of some of the few delta and alluvial

Open-File Report↗
USGS2020

Small basin annual yield and percentage of snowmelt runoff in North Dakota, 1931–2016

The North Dakota hydrology manual prepared by the U.S. Department of Agriculture, Soil Conservation Service, presents methodologies primarily used for developing hydrology for onfarm conservation practices, watershed projects, Resource Conservation and Development project measures, and river basin studies. The manual includes data necessary for determining hydrologic factors and developing a design discharge for a given site and intended purpose. The U.S. Geological Survey, in cooperation with the North Dakota Natural Resources Conservation Service, developed methods to reproduce and update the annual yield maps for chapter 7 of the North Dakota hydrology manual. Annual yields, in acre-feet per square mile, for the 50- and 80-percent exceedance probabilities and expected percentage of snowmelt runoff isolines were estimated using U.S. Geological Survey streamflow data from 1931 to 2016 for 71 selected streamgages with drainage areas of 505 square miles or less. An application of a modified Maintenance of Variance Extension Type III was used to estimate missing annual streamflow volumes. An alternate expected percentage of snowmelt runoff isolines was estimated using High Plains Climatic Center precipitation and snowmelt data from 1931 to 2016 for 85 selected sites. The final expected percentage of snowmelt runoff isolines was estimated using streamflow data instead of precipitation and snowfall depth data. A snowmelt runoff seasonal period of March–May produced better isoline slopes than a November–May runoff seasonal period. Slopes of the expected percentage of snowmelt runoff isolines were sensitive to amounts of missing record. Suitable isoline slopes appeared when the missing record was set to 50 percent (43 years) and 66 percent (57 years) for the 86-year period of 1931–2016.

North Dakota↗