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At least 163 records · Page 9Linked to original sources

Geographical and geological data from caves and mines infected with white-nose syndrome (WNS) before September 2009 in the eastern United States

Since 2006, a white fungus named Geomyces destructans has been observed on the muzzles, noses, ears, and (or) wings of bats in the eastern United States, and bat colonies that are infected with this fungus have experienced dramatic incidences of mortality. Although it is not exactly certain how and why these bats are dying, this condition has been named white-nose syndrome (WNS). WNS appears to have spread from an initial infection site at a cave that is connected to a commercial cave in New York, and by the end of August 2009 was identified in at least 74 other sites in the eastern United States. Although detailed geographical and geological data are limited, a review of the available data shows that sites infected with WNS before September 2009 include both natural caves and mines. These infected sites extend from New Hampshire to Virginia, and known site elevations range from 84 to 2693 feet above sea level. In terms of geological setting, the infected sites include sedimentary, metamorphic, and igneous rocks of ages ranging from Precambrian to Jurassic. However, by the end of August 2009, no infected sites had been identified in strata of Mississippian, Cretaceous, or Triassic age. Meteorological data are sparse, but most of the recorded air temperatures in the known WNS-infected caves and mines range from 0 to 13.9 degrees C, and humidity measurements range from 68 to 100 percent. Although it is not certain which environmental parameters are important for WNS, it is hoped that the geographical and geological information presented in this paper will inform and clarify some of the debate about WNS, lead to greater understanding of the environmental parameters associated with WNS, and highlight the paucity of scientific data from caves in the eastern United States.

Journal of Cave and Karst Studies

Molecular evidence of undescribed Ceratonova sp. (Cnidaria: Myxosporea) in the freshwater polychaete, Manayunkia speciosa , from western Lake Erie

We used PCR to screen pooled individuals of Manayunkia speciosa from western Lake Erie, Michigan, USA for myxosporean parasites. Amplicons from positive PCRs were sequenced and showed a Ceratonova species in an estimated 1.1% (95% CI = 0.46%, 1.8%) of M . speciosa individuals. We sequenced 18S, ITS1, 5.8S, ITS2 and most of the 28S rDNA regions of this Ceratonova sp., and part of the protein-coding EF2 gene. Phylogenetic analyses of ribosomal and EF2 sequences showed the Lake Erie Ceratonova sp. is most similar to, but genetically distinct from, Ceratonova shasta . Marked interspecific polymorphism in all genes examined, including the ITS barcoding genes, along with geographic location suggests this is an undescribed Ceratonova species. COI sequences showed M . speciosa individuals in Michigan and California are the same species. These findings represent a third parasite in the genus Ceratonova potentially hosted by M . speciosa .

Michigan

Bibliography of selected water-resources publications on Nevada by the U.S. Geological Survey, 1885 through 1995

References to 898 water-resources publications are listed alphabetically by senior author and indexed by hydrographic-area name or other geographic features. Most of the publications were written between 1960 and 1995 by U.S. Geological Survey scientists and engineers of the Water Resources Division, Nevada District. Also included are references to publications by other Water Resources Division authors that deal with Nevada hydrology. References to publications written before 1960 are included to provide a historical perspective. The references include several types of Geological Survey book and map publications, as well as State-series reports, journal articles, conference and symposium papers, abstracts, and graduate- degree theses. Information on publication availability is provided also.

Open-File Report

Newly documented host fishes for the eastern elliptio mussel (Elliptio complanata)

The eastern elliptio Elliptio complanata is a common, abundant, and ecologically important freshwater mussel that occurs throughout the Atlantic Slope drainage in the United States and Canada. Previous research has shown E. complanata glochidia to be host fish generalists, parasitizing yellow perch Perca flavescens , banded killifish Fundulus diaphanus , banded sculpin Cottus carolinae , and seven centrarchid species. Past laboratory studies have been conducted in the Midwest; however, glochidia used in these studies were obtained from adult mussels in the Great Lakes or St. Lawrence River basins, or glochidia sources were not reported. The objective of this study was to identify host fishes for E. complanata from streams in the Mid-Atlantic region. We used artificial laboratory infections to test host suitability of 38 fish and 2 amphibian species with E. complanata glochidia from the Chesapeake Bay drainage. Glochidia successfully metamorphosed into juvenile mussels on five fish species: American eel Anguilla rostrata , brook trout Salvelinus fontinalis , lake trout Salvelinus namaycush , mottled sculpin Cottus bairdii , and slimy sculpin Cottus cognatus . American eel was the most effective host, yielding the highest overall metamorphosis success (percentage of attached glochidia that transformed into juvenile mussels; ≥0.90) and producing 13.2 juveniles per fish overall. No juvenile E. complanata metamorphosed on other fish or amphibian species tested, including many previously identified host fishes that appear in the literature. Reasons for discrepancies in published host fish could include geographic variation in host use across the species' range, differences in host use between lentic and lotic populations, or poorly resolved taxonomy within the genus Elliptio .

Journal of Fish and Wildlife Management

Prevalence and distribution of Wellfleet Bay virus exposure in the Common Eider ( Somateria mollissima )

Between 1998 and 2014, recurrent mortality events were reported in the Dresser's subspecies of the Common Eider ( Somateria mollissima dresseri ) on Cape Cod, Massachusetts, USA near Wellfleet Harbor. The early die-offs were attributed to parasitism and emaciation, but beginning in 2006 a suite of distinct lesions was observed concomitant with the isolation of a previously unknown RNA virus. This novel pathogen was identified as an orthomyxovirus in the genus Quaranjavirus and was named Wellfleet Bay virus (WFBV). To assess evidence of exposure to this virus in Common Eiders, we conducted a longitudinal study of the prevalence of WFBV antibodies at multiple locations from 2004–14; we collected 2,258 serum samples from six locations and analyzed each using a microneutralization assay. Results corroborate the emergence of WFBV in 2006 based on the first detection of antibodies in that year. Significantly higher prevalence was detected in Common Eiders sampled in Massachusetts compared to those in Maine, Nova Scotia, and Québec. For birds breeding and wintering in Massachusetss, viral exposure varied by age, sex, and season of sampling, and prevalence by season and sex were highly interrelated with greater numbers of antibody-positive males in the autumn and females in the spring. No evidence of viral exposure was detected in the Northern subspecies ( Somateria mollissima borealis ). Among the locations sampled, Massachusetts appears to be the epicenter of Common Eider exposure to WFBV. Further research is warranted to understand the factors controlling the epidemiology of WFBV in Massachussetts, including those that may be limiting geographic expansion of this virus.

Journal of Wildlife Diseases

Geographic variation in migration chronology and winter distribution of midcontinent greater white-fronted geese

We evaluated spatial and temporal differences in migratory behavior among different breeding groups of midcontinent greater white-fronted geese (Anser albifrons) using band-recovery data and observations of neck collared geese during migration and winter. Birds from different breeding areas were initially delineated by geographic distance into 6 banding reference areas (BRAs): 1) interior Alaska, 2) North Slope of Alaska, 3) western Northwest Territories (NWT), 4) western Nunavut, 5) central Nunavut, and 6) eastern Nunavut. The banding groups also differed by breeding habitat, with geese from interior Alaska nesting in the boreal forest (taiga), and all other groups breeding in tundra habitats. Geese from interior Alaska migrated earlier during autumn, and were more likely to winter farther south (in Mexico) than geese from other breeding areas. Geese banded in central and eastern Nunavut (Queen Maud Gulf and Inglis River) wintered farther east (in Louisiana) than geese from other breeding areas. Small-scale (within-state) geographic segregation of wintering flocks was evidenced by the recent (post-1990) nearly exclusive use of a new wintering area in north central Texas by geese from interior Alaska. Segregation among BRAs was also apparent in Mexico, where taiga geese were found predominantly in the central Highlands (states of Zacatecas and Durango), whereas tundra geese mostly used states along the Gulf Coast (primarily Tamaulipas). Interior Alaska birds initiated spring migration earlier than geese from other areas, and were more likely than others to stop in the Rainwater Basin of Nebraska, a region where cholera outbreaks periodically kill thousands of geese. Geese from interior Alaska were the first to arrive at spring staging areas in prairie Canada where BRAs exhibited spatial delineation (a longitudinal cline) in relation to breeding areas. Our results show significant geographic and temporal variation among taiga and tundra breeding cohorts during autumn, winter, and spring. Temporal and spatial differences in migratory behavior may allow management practices that accommodate potential demographic differences between taiga and tundra populations.

Journal of Wildlife Management

Application of two hydrologic models with different runoff mechanisms to a hillslope dominated watershed in the northeastern US: A comparison of HSPF and SMR

Differences in the simulation of hydrologic processes by watershed models directly affect the accuracy of results. Surface runoff generation can be simulated as either: (1) infiltration-excess (or Hortonian) overland flow, or (2) saturation-excess overland flow. This study compared the Hydrological Simulation Program - FORTRAN (HSPF) and the Soil Moisture Routing (SMR) models, each representing one of these mechanisms. These two models were applied to a 102 km2 watershed in the upper part of the Irondequoit Creek basin in central New York State over a seven-year simulation period. The models differed in both the complexity of simulating snowmelt and baseflow processes as well as the detail in which the geographic information was preserved by each model. Despite their differences in structure and representation of hydrologic processes, the two models simulated streamflow with almost equal accuracy. Since streamflow is an integral response and depends mainly on the watershed water balance, this was not unexpected. Model efficiency values for the seven-year simulation period were 0.67 and 0.65 for SMR and HSPF, respectively. HSPF simulated winter streamflow slightly better than SMR as a result of its complex snowmelt routine, whereas SMR simulated summer flows better than HSPF as a result of its runoff and baseflow processes. An important difference between model results was the ability to predict the spatial distribution of soil moisture content. HSPF aggregates soil moisture content, which is generally related to a specific pervious land unit across the entire watershed, whereas SMR predictions of moisture content distribution are geographically specific and matched field observations reasonably well. Important is that the saturated area was predicted well by SMR and confirmed the validity of using saturation-excess mechanisms for this hillslope dominated watershed. ?? 2003 Elsevier B.V. All rights reserved.

Journal of Hydrology

Occurrence of the amphibian pathogen Batrachochytrium dendrobatidis in Pacific Northwestern USA

Chytridiomycosis (infection by the fungus Batrachochytrium dendrobatidis ) has been associated with amphibian declines in at least four continents. We report results of disease screens from 210 pond-breeding amphibians from 37 field sites in Oregon and Washington. We detected B. dendrobatidis on 28% of sampled amphibians, and and we found - > 1 detection of B. dendrobatidi s from 43% of sites. Four of seven species tested positive for B. dendrobatidis , including the Northern Red-Legged Frog ( Rana aurora ), Columbia Spotted Frog ( Rana luteiventris ), and Oregon Spotted Frog ( Rana pretiosa ). We also detected B. dendrobatidis in nonnative American Bullfrogs ( Rana catesbeiana ) from six sites in western and central Oregon. Our study and other recently published findings suggest that B. dendrobatidis has few geographic and host taxa limitations among North American anurans. Further research on virulence, transmissibility, persistence, and interactions with other stressors is needed to assess the potential impact of B. dendrobatidis on Pacific Northwestern amphibians.

Oregon

Geographic and temporal differences in band reporting rates for American black ducks

Recoveries of reward- and standard-banded American black ducks (Anas rubripes) were used to estimate band reporting rates and to investigate geographic and temporal variability in reporting rate for 1978-80. Reporting rates were higher close ( 20 km) to the parent banding site in 3 of 42 samples and were higher close to the nearest black duck banding site in 3 of 35 samples., Reporting rates were higher P 0.05) in Canada than in the Atlantic Flyway for the pre-huntIng season 1980-banded sample, but were otherwise similar among regions. Temporal differences over the duration of the study occurred, but there were no consistent trends over time. The small number of rejections suggests that there is little evidence of differences in band reporting rate by proximity to banding sites, geographic location, or over time. Thus, the best estimate of band reporting rate for black ducks is a constant 0.43. This estimate should be used with caution, because we believe that it overestimates reporting rate due to the unknown proportion of reward bands found that were not reported.

Journal of Wildlife Management

New Paleogene pollen species from the Gulf and Atlantic Coastal Plains

Four new pollen species are described on the basis of specimens from the Paleocene to early middle Eocene interval of the Gulf and Atlantic Coastal Plains. The species and their known geologic and geographic ranges are Trivestibulopollenitcs fissuratus (Midwayan to early Sabinian, Claibornian?; gulf coast?, Georgia to South Carolina); Pseudoplicapollis limitata (Midwayan to late Sabinian; gulf coast to Massachusetts), Tricolpitcs asper (early Midwayan to early Claibornian; gulf coast to Massachusetts), and Tricolpites redactus (early Midwayan to early Sabinian; South Carolina to Massachusetts).

South Carolina

MODIS derived vegetation index for drought detection on the San Carlos Apache Reservation

A variety of vegetation indices derived from remotely sensed data have been used to assess vegetation conditions, enabling the identification of drought occurrences as well as the evaluation of drought impacts. Moderate Resolution Imaging Spectroradiometer (MODIS) Terra 8-day composite data were used to compute the Modified Soil Adjusted Vegetation Index II (MSAVI 2 ) of four dominant vegetation types over a 13-year period (2002 – 2014) on the San Carlos Apache Reservation in Arizona, US. MSAVI 2 anomalies were used to identify adverse impacts of drought on vegetation, characterized as mean MSAVI 2 below the 13-year average. In terms of interannual variability, we found similar responses between grassland and shrubland, and between woodland and forest vegetation types. We compared MSAVI 2 for specific vegetation types with precipitation data at the same time step, and found a lag time of roughly two months for the peak MSAVI 2 values following precipitation in a given year. All vegetation types responded to summer monsoon rainfall, while shrubland and annual herbaceous vegetation also displayed a brief spring growing season following winter snowmelt. MSAVI 2 values of shrublands corresponded well with precipitation variability both for summer rainfall and winter snowfall, and can be potentially used as a drought indicator on the San Carlos Apache Reservation given its wide geographic distribution. We demonstrated that moderate temporal frequency satellite-based MSAVI 2 can provide drought monitoring to inform land management decisions, especially on vegetated tribal land areas where in situ precipitation data are limited.

International Journal of Advanced Remote Sensing a

Survey of geographical information system and image processing software

The Global Resource Information Database—a part of the United Nations Environment Programme—conducts a bi-annual survey of geographical information system (GIS) and image processing (IP) software. This survey makes information about software products available in developing countries. The 1993 survey showed that the number of installations of GIS, IP, and related software products increased dramatically from 1991 to 1993, mostly in North America and Europe.

International Journal of Remote Sensing

United States‐Mexican border watershed assessment: Modeling nonpoint source pollution in Ambos Nogales

Ecological considerations need to be interwoven with economic policy and planning along the United States‐Mexican border. Non‐point source pollution can have significant implications for the availability of potable water and the continued health of borderland ecosystems in arid lands. However, environmental assessments in this region present a host of unique issues and problems. A common obstacle to the solution of these problems is the integration of data with different resolutions, naming conventions, and quality to create a consistent database across the binational study area. This report presents a simple modeling approach to predict nonpoint source pollution that can be used for border watersheds. The modeling approach links a hillslopescale erosion‐prediction model and a spatially derived sediment‐delivery model within a geographic information system to estimate erosion, sediment yield, and sediment deposition across the Ambos Nogales watershed in Sonora, Mexico, and Arizona. This paper discusses the procedures used for creating a watershed database to apply the models and presents an example of the modeling approach applied to a conservation‐planning problem.

Arizona, Sonoma

Research to support sterile-male-release and genetic alteration techniques for sea lamprey control

Integrated pest management of sea lampreys in the Laurentian Great Lakes has recently been enhanced by addition of a sterile-male-release program, and future developments in genetic approaches may lead to additional methods for reducing sea lamprey reproduction. We review the development, implementation, and evaluation of the sterile-male-release technique (SMRT) as it is being applied against sea lampreys in the Great Lakes, review the current understanding of SMRT efficacy, and identify additional research areas and topics that would increase either the efficacy of the SMRT or expand its geographic potential for application. Key areas for additional research are in the sterilization process, effects of skewed sex ratios on mating behavior, enhancing attractiveness of sterilized males, techniques for genetic alteration of sea lampreys, and sources of animals to enhance or expand the use of sterile lampreys.

Journal of Great Lakes Research

Engaging stakeholders to develop a decision support model of conservation risk and management capacity to prioritize investments in Bull Trout recovery

Rarely are sufficient resources available to support the full suite of management actions to promote recovery of a species across their entire distribution. Decision support models are a tool that can inform natural resource management decisions with consideration of the perspectives from a variety of stakeholders who work across large geographic and jurisdictional extents. We offer an example of a decision support model that was developed by several Federal and State natural resource agencies to rank Bull Trout Salvelinus confluentus core areas for prioritizing conservation investment within Oregon, USA. We engaged State level decision makers to identify parameters believed to be influential in determining funding allocations for Bull Trout core areas. Parameters were linked in a model framework that was further refined with input from local Bull Trout experts with knowledge specific to the various core areas. The model produces a relative priority value that is a combination of the conservation risk to the species and the management capacity to address threats. A series of sensitivity analyses suggests that Bull Trout persistence and threat score are most influential in determining the relative priority of a core area, and life-history and genetic diversity are least influential. One of the more powerful products from this work is an interactive web-based application ( https://das.ecosphere.fws.gov/public/obts/ ) that anyone can use to explore how their beliefs in parameter values will affect the relative priority of Bull Trout core areas across Oregon. Our modeling effort is an example of engaging stakeholders with different roles in species recovery and across a large geographic area to create a clearer path forward in allocating limited resources for species recovery. This approach can be employed to address a number of natural resource management situations across species and habitats.

Oregon

Predictions and drivers of sub-reach-scale annual streamflow permanence for the upper Missouri River basin: 1989-2018

The presence of year-round surface water in streams (i.e., streamflow permanence) is an important factor for identifying aquatic habitat availability, determining the regulatory status of streams, managing land use change, allocating water resources, and designing scientific studies. However, accurate, high resolution, and dynamic prediction of streamflow permanence that accounts for year-to-year variability at a regional extent is a major gap in modeling capability. Herein, we expand and adapt the U.S. Geological Survey (USGS) PRObability of Streamflow PERmanence (PROSPER) model from its original implementation in the Pacific Northwest (PROSPER PNW ) to the upper Missouri River basin (PROSPER UM ), a geographical region that includes mountain and prairie ecosystems of the northern United States. PROSPER UM is an empirical model used to estimate the probability that a stream channel has year-round flow in response to climatic conditions (monthly and annual) and static physiographic predictor variables of the upstream basin. The structure and approach of PROSPER UM are generally consistent with the PROSPER PNW model but include improved spatial resolution (10 m) and a longer modeling period. Average model accuracy was 81 %. Drainage area, upstream proportion as wetlands, and upstream proportion as developed land cover were the most important predictor variables. The PROSPER UM model identifies decreases in streamflow permanence during climatically drier years, although there is variability in the magnitude across basins highlighting geographically varying sensitivity to drought. Variability in the response of perennial streams to drought conditions among basins in the study area was also observed.

Montana, North Dakota, South Dakota, Wyoming

Evaluating the applicability of the generalized power-law rating curve model: With applications to paired discharge-stage data from Iceland, Sweden, and the United States

Hydrologic research and operations make extensive use of streamflow time series. In most applications, these time series are estimated from rating curves, which relate flow to some easy-to-measure surrogate, typically stage. The conventional stage-discharge rating takes the form of a segmented power law, with one segment for each hydrologic control at the stream gauge. However, these ratings are notoriously difficult to estimate with numerical methods, so that most are still developed manually. A few automated algorithms have emerged, but their use is sporadic, and their relative merits have not been rigorously assessed. One recently developed approach, the generalized power-law, avoids the segmenting problem by representing the power-law exponent as a Gaussian process. On the one hand, this representation is more flexible and easier to fit, but its flexibility might allow unrealistic solutions, so it needs to be tested under a range of conditions to assess its operational viability. This study evaluates the generalized power-law rating curve model by applying it to observations from 180 streams in Iceland, Sweden, and the United States. Overall, the model proved flexible and computationally robust, generating convincing rating curves across a range of geographic settings and was comparable to curves generated by a segmented rating model. Lastly, we propose a model-selection algorithm based on information theory to help identify the best rating curve model for a particular stream gauge.

Journal of Hydrology

Subspecies differentiation in an enigmatic chaparral shrub species

Premise Delimiting biodiversity units is difficult in organisms in which differentiation is obscured by hybridization, plasticity, and other factors that blur phenotypic boundaries. Such work is more complicated when the focal units are subspecies, the definition of which has not been broadly explored in the era of modern genetic methods. Eastwood manzanita ( Arctostaphylos glandulosa Eastw.) is a widely distributed and morphologically complex chaparral shrub species with much subspecific variation, which has proven challenging to categorize. Currently 10 subspecies are recognized, however, many of them are not geographically segregated, and morphological intermediates are common. Subspecies delimitation is of particular importance in this species because two of the subspecies are rare. The goal of this study was to apply an evolutionary definition of “subspecies” to characterize structure within Eastwood manzanita. Methods We used publicly available geospatial environmental data and reduced‐representation genome sequencing to characterize environmental and genetic differentiation among subspecies. In addition, we tested whether subspecies could be differentiated by environmentally associated genetic variation. Results Our analyses do not show genetic differentiation among subspecies of Eastwood manzanita, with the exception of one of the two rare subspecies. In addition, our environmental analyses did not show ecological differentiation, though limitations of the analysis prevent strong conclusions. Conclusions Genetic structure within Eastwood manzanita does not correspond to current subspecies circumscriptions, but rather reflects geographic distribution. Our study suggests that subspecies concepts need to be reconsidered in long‐lived plant species, especially in the age of next‐generation sequencing.

American Journal of Botany