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USGS2019

Patterns of acoustical activity of bats prior to and 10 years after WNS on Fort Drum Army Installation, New York

Previous acoustic surveys, netting, and count data have shown that overall bat activity patterns have shifted among most species between pre- and post-white-nose syndrome (WNS) years in much of North America where WNS has occurred. However, the significance of these changes is based on the species-specific susceptibility to WNS. We used acoustically recorded echolocation passes obtained at Fort Drum, New York to describe changes in bat activity pre-WNS (2004–2007) to post-WNS (2008–2018). We examined seasonal and yearly changes in bat activity as they relate to the presence of WNS at hibernacula near (<25 km) Fort Drum. A priori , we expected that overall activity for communal hibernating species would be less in years following WNS, and migratory bats or those hibernating bats that are less affected by WNS would show no response or a positive response, due to niche relaxation/competitive release. Our results indicated both an overall and seasonal decrease in activity for Myotis spp. post-WNS. For WNS-susceptible species, our results reflect the high level of mortality in regional winter hibernacula post-WNS and possibly variable reproductive effort and recruitment thereafter. Although migratory bats did show increases in post-WNS activity throughout the summer, we found little evidence that community displacement was occurring on a nightly level by any species. The continuous spread of WNS across North America has had strong negative effects on bat populations of affected species, and our research identifies how individual species (both impacted and non-impacted) respond to WNS.

New York↗

USGS2005

Repeated surveys by acoustic Doppler current profiler for flow and sediment dynamics in a tidal river

A strategy of repeated surveys by acoustic Doppler current profiler (ADCP) was applied in a tidal river to map velocity vectors and suspended-sediment indicators. The Sacramento River at the junction with the Delta Cross Channel at Walnut Grove, California, was surveyed over several tidal cycles in the Fall of 2000 and 2001 with a vessel-mounted ADCP. Velocity profiles were recorded along flow-defining survey paths, with surveys repeated every 27 min through a diurnal tidal cycle. Velocity vectors along each survey path were interpolated to a three-dimensional Cartesian grid that conformed to local bathymetry. A separate array of vectors was interpolated onto a grid from each survey. By displaying interpolated vector grids sequentially with computer animation, flow dynamics of the reach could be studied in three-dimensions as flow responded to the tidal cycle. Velocity streamtraces in the grid showed the upwelling of flow from the bottom of the Sacramento River channel into the Delta Cross Channel. The sequential display of vector grids showed that water in the canal briefly returned into the Sacramento River after peak flood tides, which had not been known previously. In addition to velocity vectors, ADCP data were processed to derive channel bathymetry and a spatial indicator for suspended-sediment concentration. Individual beam distances to bed, recorded by the ADCP, were transformed to yield bathymetry accurate enough to resolve small bedforms within the study reach. While recording velocity, ADCPs also record the intensity of acoustic backscatter from particles suspended in the flow. Sequential surveys of backscatter intensity were interpolated to grids and animated to indicate the spatial movement of suspended sediment through the study reach. Calculation of backscatter flux through cross-sectional grids provided a first step for computation of suspended-sediment discharge, the second step being a calibrated relation between backscatter intensity and sediment concentration. Spatial analyses of ADCP data showed that a strategy of repeated surveys and flow-field interpolation has the potential to simplify computation of flow and sediment discharge through complex waterways. The use of trade, product, industry, or firm names in this report is for descriptive purposes only and does not constitute endorsement of products by the US Government. ?? 2005 Elsevier B.V. All rights reserved.

Journal of Hydrology↗

USGS2022

Advanced distributed acoustic sensing vertical seismic profile imaging of an Alaska North Slope gas hydrate field

Gas hydrates are found in significant quantities on the North Slope of Alaska in subpermafrost sand units and intermixed in lower portions of permafrost within the hydrate stability window. While conventional surface seismic data and established imaging methods can indicate the presence of gas hydrate reservoirs, producing high-resolution images of (seismically) thin layers remains challenging due to the preferential attenuation of the higher-frequency data components. An alternative strategy is to use distributed acoustic sensing (DAS) involving cementing optical fibers into boreholes to measure seismic wavefield energy closer to the strata of interest using vertical seismic profiling (VSP). DAS VSP imaging takes advantage of the shorter travel paths and reduced attenuation to generate higher-resolution near-well images. We illustrate these benefits on a DAS VSP data set acquired at the Hydrate-01 stratigraphic test well located in the Prudhoe Bay Unit of Alaska where significant gas hydrate deposits have been detected in two subpermafrost sand layers that are intended for long-duration production testing. Our DAS data preprocessing workflow effectively isolates the upgoing compressional-wave (P-wave) reflections required for subsurface acoustic imaging. After applying three-dimensional (3-D) tomography to improve the quality of the 3-D migration velocity model, we use 3-D reverse-time migration (RTM) to develop high-quality images of the two target sands and minor near-well faulting. We validate our RTM images through highly accurate well-ties with previously acquired petrophysical log data. This study demonstrates that combining 3-D RTM imaging with DAS VSP data provides significant value to gas hydrate and similar projects, and it suggests that more advanced inversion approaches such as (elastic) least-squares RTM could recover higher-resolution and more quantitative estimates of subsurface reflectivity, which would be valuable for refining the understanding of gas hydrate systems.

Alaska↗

USGS2005

Averaged indicators of secondary flow in repeated acoustic Doppler current profiler crossings of bends

Cross‐stream velocity was measured in a large river bend at high spatial resolution over three separate survey episodes. A suite of methods for resolving cross‐stream velocity distributions was tested on data collected using acoustic Doppler current profilers (ADCP) in the sand‐bedded Sacramento River, California. The bend was surveyed with repeated ADCP crossings at eight cross sections during a rising limb of high discharge in February 2004 and twice on recession in March 2004. By translating and interpolating repeated ADCP crossings to planar grids, velocity ensembles at similar positions along irregular boat paths could be averaged. The averaging minimized turbulent fluctuations in streamwise velocities over 1 m/s, enabling the resolution of weaker cross‐stream velocities (~15‐30 cm/s). Secondary‐flow influence on suspended sediment was inferred from a lateral region of acoustic backscatter intensity aligned with outward flow over the point bar. A near‐bed decrease in backscatter intensity across the pool corresponded with inward cross‐stream flow. These suspension indicators were used to orient averaged velocity grids for unambiguously defining the cross‐stream velocity magnitudes. Additional field investigations could test whether the correlation between cross‐stream velocity and backscatter intensity patterns results from helical recirculation of suspended sediment to the inside of the bend. These river measurements, consistent with classic and recent laboratory studies, show that ADCP surveys can provide refined views of secondary flow and sediment movement in large rivers.

Water Resources Research↗

USGS2022

Mapping 2-D bedload rates throughout a sand-bed river reach from high-resolution acoustical surveys of migrating bedforms

This paper introduces a method for determining spatially-distributed, 2-D bedload rates using repeat, high-resolution surveys of the bed topography. As opposed to existing methods, bedform parameters and bedload rates are computed from bed elevation profiles interpolated along the local bedform velocities. The bedform velocity fields are computed applying Large-Scale Particle Image Velocimetry, initially developed for surface velocity measurements, to pairs of successive Digital Elevation Models (DEMs). The bathymetry data are interpolated along the direction of each bedform velocity and the mean height of the closest bedform is computed. The dune shape factor is also evaluated along each bedform direction of travel. The local bedload fluxes can be computed by multiplying the bedform velocity by its mean height averaged over the successive two DEMs, and they can be time-averaged over a series of DEM pairs. This method is applied to a high-resolution acoustical survey of an approximately 300 m long by 40 m wide reach of the Colorado River in Grand Canyon upstream from Diamond Creek, USA. The repeat period was about 6–10 min and bed elevation was interpolated every 0.25 m. The obtained results provide insight to the spatial and temporal variability of bedload rates, bedform parameters and bedload fluxes through cross-sections. The method can be applied to other repeated acoustical surveys of river reaches provided that the space and time resolutions are high enough to capture the local movement of bedforms.

Arizona↗

USGS2010

Measuring water surface and streambed elevation changes with the acoustic velocity metering system

Acoustic velocity metering systems used to measure the water velocity along a diagonal path across a stream can also be used to measure stage and streambed changes. Underwater acoustic transmissions reflected from the water surface can accurately measure depth above transducers. Similarly, signals reflected from the streambed can indicate streambed changes in the vicinity midway between transducers.

Water Resources Research↗

USGS2008

Effects of acoustic waves on stick-slip in granular media and implications for earthquakes

It remains unknown how the small strains induced by seismic waves can trigger earthquakes at large distances, in some cases thousands of kilometres from the triggering earthquake, with failure often occurring long after the waves have passed. Earthquake nucleation is usually observed to take place at depths of 10-20 km, and so static overburden should be large enough to inhibit triggering by seismic-wave stress perturbations. To understand the physics of dynamic triggering better, as well as the influence of dynamic stressing on earthquake recurrence, we have conducted laboratory studies of stick-slip in granular media with and without applied acoustic vibration. Glass beads were used to simulate granular fault zone material, sheared under constant normal stress, and subject to transient or continuous perturbation by acoustic waves. Here we show that small-magnitude failure events, corresponding to triggered aftershocks, occur when applied sound-wave amplitudes exceed several microstrain. These events are frequently delayed or occur as part of a cascade of small events. Vibrations also cause large slip events to be disrupted in time relative to those without wave perturbation. The effects are observed for many large-event cycles after vibrations cease, indicating a strain memory in the granular material. Dynamic stressing of tectonic faults may play a similar role in determining the complexity of earthquake recurrence. ??2007 Nature Publishing Group.

Nature↗

USGS2023

Whole-lake acoustic telemetry to evaluate survival of stocked juvenile fish

Estimates of juvenile survival are critical for informing population dynamics and the ecology of fish, yet these demographic parameters are difficult to measure. Here, we demonstrate that advances in animal tracking technology provide opportunities to evaluate survival of juvenile tagged fish. We implemented a whole-lake telemetry array in conjunction with small acoustic tags (including tags < 1.0 g) to track the fate of stocked juvenile cisco ( Coregonus artedi ) as part of a native species restoration effort in the Finger Lakes region of New York, USA. We used time-to-event modeling to characterize the survival function of stocked fish, where we infer mortality as the cessation of tag detections. Survival estimates revealed distinct stages of juvenile cisco mortality including high immediate post-release mortality, followed by a period of elevated mortality during an acclimation period. By characterizing mortality over time, the whole-lake biotelemetry effort provided information useful for adapting stocking practices that may improve survival of stocked fish, and ultimately the success of the species reintroduction effort. The combination of acoustic technology and time-to-event modeling to inform fish survival may have wide applicability across waterbodies where receiver arrays can be deployed at scale and where basic assumptions about population closure can be satisfied.

New York↗

USGS2002

Outcrop-scale acoustic facies analysis and latest Quaternary development of Hueneme and Dume submarine fans, offshore California

The uppermost Quaternary deposits of the Hueneme and Dume submarine fans in the Santa Monica Basin have been investigated using a closed-spaced grid of boomer seismic-reflection profiles, which give vertical resolution of a few tens of centimetres with acoustic penetration to 50 m. Acoustic facies integrated with geometry define six architectural elements, some with discrete subelements that are of a scale that can be recognized in outcrops of ancient turbidite systems. In the Santa Monica Basin, the relationship of these elements to fan morphology, stratigraphy and sediment source is precisely known. The width of upper Hueneme fan valley has been reduced from 5 km since the last glacial maximum to 1 km at present by construction of laterally confined sandy levees within the main valley. The middle fan comprises three main subelements: thick sand deposits at the termination of the fan valley, low-gradient sandy lobes typically 5 km long and < 10 m thick, and scoured lobes formed of alternating sand and mud beds with many erosional depressions. The site of thickest lobe sediment accumulation shifts through time, with each sand bed deposited in a previous bathymetric low (i.e. compensation cycles). The lower fan and basin plain consists of sheet-like alternations of sand and mud with shallow channels and lenses. Variations in the rate of late Quaternary sea level rise initiated changes in sediment facies distribution. At lowstand, and during the approximately 11 ka stillstand in sea level, the Hueneme Fan was fed largely by hyperpycnal flow from the Santa Clara River delta, depositing high sediment waves on the right hand levee and thick sandy lobes on the middle fan. At highstand of sea level, most turbidity currents were generated by failure of silty prodelta muds. In contrast, the smaller Dume Fan was apparently always fed from littoral drift of sand through a single-canyon point source.

Sedimentology↗

USGS2007

Validation of streamflow measurements made with acoustic doppler current profilers

The U.S. Geological Survey and other international agencies have collaborated to conduct laboratory and field validations of acoustic Doppler current profiler (ADCP) measurements of streamflow. Laboratory validations made in a large towing basin show that the mean differences between tow cart velocity and ADCP bottom-track and water-track velocities were -0.51 and -1.10%, respectively. Field validations of commercially available ADCPs were conducted by comparing streamflow measurements made with ADCPs to reference streamflow measurements obtained from concurrent mechanical current-meter measurements, stable rating curves, salt-dilution measurements, or acoustic velocity meters. Data from 1,032 transects, comprising 100 discharge measurements, were analyzed from 22 sites in the United States, Canada, Sweden, and The Netherlands. Results of these analyses show that broadband ADCP streamflow measurements are unbiased when compared to the reference discharges regardless of the water mode used for making the measurement. Measurement duration is more important than the number of transects for reducing the uncertainty of the ADCP streamflow measurement. ?? 2007 ASCE.

Journal of Hydraulic Engineering↗

USGS2012

Field evaluation of shallow-water acoustic doppler current profiler discharge measurements

In 2004, the U.S. Geological Survey (USGS) Office of Surface Water staff and USGS Water Science employees began testing the StreamPro, an acoustic Doppler current profiler (ADCP) for shallow-water discharge measurements. Teledyne RD Instruments introduced the StreamPro in December of 2003. The StreamPro is designed to make a "moving boat" discharge measurement in streams with depths between 0.15 and 2 m. If the StreamPro works reliably in these conditions, it will allow for use of ADCPs in a greater number of streams than previously possible. Evaluation sites were chosen to test the StreamPro over a range of conditions. Simultaneous discharge measurements with mechanical and other acoustic meters, along with stable rating curves at established USGS streamflow-gaging stations, were used for comparisons. The StreamPro measurements ranged in mean velocity from 0.076 to 1.04 m/s and in discharge from 0.083 m 3/s to 43.4 m 3/s. Tests indicate that discharges measured with the StreamPro compare favorably to the discharges measured with the other meters when the mean channel velocity is greater than 0.25 m/s. When the mean channel velocity is less than 0.25 m/s, the StreamPro discharge measurements for individual transects have greater variability than those StreamPro measurements where the mean channel velocity is greater than 0.25 m/s. Despite this greater variation in individual transects, there is no indication that the StreamPro measured discharges (the mean discharge for all transects) are biased, provided that enough transects are used to determine the mean discharge. ?? 2007 ASCE.

Conference Paper↗

USGS2016

Seasonal and diel effects on acoustic fish biomass estimates: application to a shallow reservoir with untargeted common carp ( Cyprinus carpio )

The aim of the present study was to understand how seasonal fish distributions affect acoustically derived fish biomass estimates in a shallow reservoir in a semi-arid country (Tunisia). To that end, sampling events were performed during four seasons (spring (June), summer (September), autumn (December) and winter (March)) that included day and night surveys. A Simrad EK60 echosounder, equipped with two 120-kHz split-beam transducers for simultaneous horizontal and vertical beaming, was used to sample the entire water column. Surveys during spring and summer and daytime hours of winter were deemed unusable owing to high methane flux from the sediment, and during the day survey of autumn, fish were close to the reservoir bottom leading to low detectability. It follows that acoustic surveys should be conducted only at night during the cold season (December–March) for shallow reservoirs having carp Cyprinus carpio (L.) as the dominant species. Further, night-time biomass estimates during the cold season declined significantly ( P < 0.001) from autumn to winter. Based on our autumn night-time survey, overall fish biomass in the Bir-Mcherga Reservoir was high (mean (± s.d.) 185 ± 98 tonnes (Mg)), but annual fishery exploitation is low (19.3–24.1 Mg) because the fish biomass is likely dominated by invasive carp not targeted by fishers. The results suggest that controlling carp would help improve the fishery.

Marine and Freshwater Research↗

USGS2016

Avian predation on juvenile Salmonids: Spatial and temporal analysis based on acoustic and passive integrated transponder tags

We evaluated the impact of predation on juvenile steelhead Oncorhynchus mykiss and yearling and subyearling Chinook Salmon O. tshawytscha by piscivorous waterbirds from 11 different breeding colonies in the Columbia River basin during 2012 and 2014. Fish were tagged with both acoustic tags and PIT tags and were tracked via a network of hydrophone arrays to estimate total smolt mortality (1 – survival) at various spatial and temporal scales during out‐migration. Recoveries of PIT tags on bird colonies, coupled with the last known detections of live fish passing hydrophone arrays, were used to estimate the impact of avian predation relative to total smolt mortality. Results indicated that avian predation was a substantial source of steelhead mortality, with predation probability (proportion of available fish consumed by birds) ranging from 0.06 to 0.28 for fish traveling through the lower Snake River and the lower and middle Columbia River. Predation probability estimates ranged from 0.03 to 0.09 for available tagged yearling Chinook Salmon and from 0.01 to 0.05 for subyearlings. Smolt predation by gulls Larus spp. was concentrated near hydroelectric dams, while predation by Caspian terns Hydroprogne caspia was concentrated within reservoirs. No concentrated areas of predation were identified for double‐crested cormorants Phalacrocorax auritus or American white pelicans Pelecanus erythrorhynchos . Comparisons of total smolt mortality relative to mortality from colonial waterbirds indicated that avian predation was one of the greatest sources of mortality for steelhead and yearling Chinook Salmon during out‐migration. In contrast, avian predation on subyearling Chinook Salmon was generally low and constituted a minor component of total mortality. Our results demonstrate that acoustic and PIT tag technologies can be combined to quantify where and when smolt mortality occurs and the fraction of mortality that is due to colonial waterbird predation relative to non‐avian mortality sources.

Transactions of the American Fisheries Society↗

USGS2020

Passive acoustic monitoring effectively detects Northern Spotted Owls and Barred Owls over a range of forest conditions

Passive acoustic monitoring using autonomous recording units (ARUs) is a fast-growing area of wildlife research especially for rare, cryptic species that vocalize. Northern Spotted Owl ( Strix occidentalis caurina ) populations have been monitored since the mid-1980s using mark–recapture methods. To evaluate an alternative survey method, we used ARUs to detect calls of Northern Spotted Owls and Barred Owls ( S. varia ), a congener that has expanded its range into the Pacific Northwest and threatens Northern Spotted Owl persistence. We set ARUs at 30 500-ha hexagons (150 ARU stations) with recent Northern Spotted Owl activity and high Barred Owl density within Northern Spotted Owl demographic study areas in Oregon and Washington, and set ARUs to record continuously each night from March to July, 2017. We reviewed spectrograms (visual representations of sound) and tagged target vocalizations to extract calls from ~160,000 hr of recordings. Even in a study area with low occupancy rates on historical territories (Washington’s Olympic Peninsula), the probability of detecting a Northern Spotted Owl when it was present in a hexagon exceeded 0.95 after 3 weeks of recording. Environmental noise, mainly from rain, wind, and streams, decreased detection probabilities for both species over all study areas. Using demographic information about known Northern Spotted Owls, we found that weekly detection probabilities of Northern Spotted Owls were higher when ARUs were closer to known nests and activity centers and when owls were paired, suggesting passive acoustic data alone could help locate Northern Spotted Owl pairs on the landscape. These results demonstrate that ARUs can effectively detect Northern Spotted Owls when they are present, even in a landscape with high Barred Owl density, thereby facilitating the use of passive, occupancy-based study designs to monitor Northern Spotted Owl populations.

Oregon, Washington↗

USGS2025

Behavioral responses of Silver Carp to underwater acoustic deterrent sounds

Objective Invasive carps continue to spread across the Mississippi River basin, posing significant ecological risk. Identifying technologies to slow their dispersal is critical. The use of sound has been proposed as a method to modify the behavior of Silver Carp Hypophthalmichthys molitrix , offering a nonstructural deterrent strategy. Methods Silver Carp implanted with acoustic transmitters were released into earthen ponds equipped with telemetry arrays. The fish were exposed to a 30-min playback of three underwater sounds (chirp saw, chirp square, and 100-hp boat motor). Movement trajectories were analyzed using a two-state hidden Markov model to estimate the effects of environmental and experimental variables on fish behavior. Results The results of the hidden Markov model supported two behavioral states. State 1 was characterized by longer step lengths (distance between positions) and greater directional persistence in turning angle (change in direction between two intervals), indicative of heighted activity. State 2 was defined by shorter step lengths and less directional persistence, suggesting reduced activity. Silver Carp that were exposed to the chirp square sound had an increased likelihood of entering state 1, whereas the 100-hp boat motor sound promoted transitions to state 2. Conclusions Underwater sounds distinctly influenced the movement of Silver Carp in earthen ponds. The chirp square sound elicited heightened activity levels, demonstrating potential for use in acoustic deterrent applications. However, the response of Silver Carp to these sounds may be influenced by the size of the study environment or the absence of natural drivers of fish behavior, such as food or reproduction. This study contributes to the development of nonstructural, species-specific deterrent systems by identifying sounds that influence the behavior of invasive carps. The application of sound-based methods may play a critical role in integrated pest management strategies for invasive carps, potentially limiting their spread while minimizing effects on native species.

Transactions of the American Fisheries Society↗

USGS2003

Complete velocity distribution in river cross-sections measured by acoustic instruments

To fully understand the hydraulic properties of natural rivers, velocity distribution in the river cross-section should be studied in detail. The measurement task is not straightforward because there is not an instrument that can measure the velocity distribution covering the entire cross-section. Particularly, the velocities in regions near the free surface and in the bottom boundary layer are difficult to measure, and yet the velocity properties in these regions play the most significant role in characterizing the hydraulic properties. To further characterize river hydraulics, two acoustic instruments, namely, an acoustic Doppler current profiler (ADCP), and a "BoogieDopp" (BD) were used on fixed platforms to measure the detailed velocity profiles across the river. Typically, 20 to 25 stations were used to represent a river cross-section. At each station, water velocity profiles were measured independently and/or concurrently by an ADCP and a BD. The measured velocity properties were compared and used in computation of river discharge. In a tow-tank evaluation of a BD, it has been confirmed that BD is capable of measuring water velocity at about 11 cm below the free-surface. Therefore, the surface velocity distribution across the river was extracted from the BD velocity measurements and used to compute the river discharge. These detailed velocity profiles and the composite velocity distribution were used to assess the validity of the classic theories of velocity distributions, conventional river discharge measurement methods, and for estimates of channel bottom roughness.

Conference Paper↗

USGS2026

Single receiver target localization in mobile marine acoustic telemetry

Many marine ecological studies track animal movement and migration using acoustic telemetry, in which animals are implanted with acoustic transmitters broadcasting a unique ID code. Receivers detect and decode these transmissions and provide an estimate of the animal’s location. As transmissions can be detected at distances of hundreds of meters to even several kilometers, localization performed using binary detection information is very coarse. Fine-scale localization can be performed using time difference of arrival systems, but such systems are costlier and require a greater number of receivers. We present a Bayesian method for target localization using only binary detection information collected by a single receiver mounted on a mobile platform. The approach reduces error in the location estimate by considering the distance-dependent probability of detection (detection efficiency curve), which must first be characterized. Stationary receivers are used to infer failed detections. This localization method is then used to inform waypoint selection for the mobile platform, using the second nondominated sorting genetic algorithm considering the tradeoff between the travel distance of the platform and localization error. Simulation results examine the effects of detection efficiency curve characteristics, number of transmissions, and travel distance on the localization error. The proposed method is further supported by experimental results from field trials conducted with an autonomous surface vehicle in Lake Huron.

IEEE Journal of Oceanic Engineering↗

USGS1993

Calibration of the BASS acoustic current meter with carrageenan agar

The BASS current meter can measure currents down to the millimeter per second range. Due to the dependence of zero offset on pressure, determining a sensor referenced velocity requires accurate in situ zeroing of the meter. Previously, flow was restricted during calibration by placing plastic bags around the acoustic volume. In this paper, bacterial grade and carrageenan agars are used in the laboratory to create a zero flow condition during calibration and are shown to be acoustically transparent. Additionally, the results of open ocean and dockside carrageenan and plastic bag comparisons are presented. Carrageenan is shown to reliably provide a low noise, zero mean flow environment that is largely independent of ambient conditions. The improved zeros make millimeter per second accuracy possible under field conditions.

Conference Paper↗