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USGS2019

Environmental and biological factors influence migratory Sea Lamprey catchability: Implications for tracking abundance in the Laurentian Great Lakes

Sea Lamprey Petromyzon marinus population trends in the Great Lakes are tracked by trapping migratory adults in tributaries and using mark and recapture techniques to estimate abundance. Understanding what environmental and biological factors influence Sea Lamprey capture in tributaries is crucial to developing efficient trapping methods and reliable abundance estimates. We analyzed data from trapping sites located on eight Great Lakes tributaries using Cormack-Jolly-Seber models and examined how water temperature, discharge, sex, and length influenced Sea Lamprey apparent survival and capture probability. Sea Lamprey apparent survival was negatively associated with water temperature in all tributaries. Additionally, the odds of small Sea Lamprey (≤45 cm) remaining available to capture were 39% less (95% CI: 63% decrease – 1% increase) than large (>45 cm) lamprey odds. These observed relationships were used to investigate if bias in abundance estimates using the pooled-Petersen estimator and Jolly-Seber models was expected to be similar across trapping locations or influenced by variable environmental conditions and biological traits. Pooled-Petersen abundance estimates had a positive bias when datasets were generated from simulated populations with empirical relationships between environmental characteristics and catchability. The degree of bias depended upon changes in stream warming patterns and was not consistent among trapping locations. Jolly-Seber models using data from either weekly-batch-marked or uniquely-marked individuals generated abundance estimate with low bias when data quality was high, but performed poorly in scenarios with few recaptured Sea Lamprey. This research can promote improved Sea Lamprey monitoring efforts by providing insight into the reliability of the pooled-Petersen abundance estimator as a tool for tracking Sea Lamprey populations and demonstrating the limitations of adopting more robust methods when data are sparse.

Laurentian Great lakes↗

USGS1949

Progress report on the sea lamprey study

SUMMARY: The Peromyscus leucopus on a 17-acre study area were live-trapped, marked, and released over a seven-day period. On the three following nights intensive snap-trapping was done on the central acre of the study plot. The animals caught by snap traps in the central acre represented the population of the central acre and several surrounding acres. By the currently accepted methods of interpreting snap-trap data, the population per acre would be considered to be 23 adults. The live-trap data show that the true population was between six and seven adults per acre. Modern methods of live-trapping are shown to be valid for population studies. Two methods are presented for the conversion of live-trap data into per acre figures. Errors involved in the current use of snap-trap data are discussed and snap-trap methods are shown to be invalid for determining actual population numbers. It should be practical to use a snap-trap quadrant technique to obtain a relative measure or index figure for small mammal populations.

The Fisherman↗

USGS1998

Variability of Secchi disk readings in an exceptionally clear and deep caldera lake

Archiv fur Hydrobiologie↗

USGS1958

A procedure for removing the effect of response bias errors from waterfowl hunter questionnaire responses

Response bias errors are studied by comparing questionnaire responses from waterfowl hunters using four large public hunting areas with actual hunting data from these areas during two hunting seasons. To the extent that the data permit, the sources of the error in the responses were studied and the contribution of each type to the total error was measured. Response bias errors, including both prestige and memory bias, were found to be very large as compared to non-response and sampling errors. Good fits were obtained with the seasonal kill distribution of the actual hunting data and the negative binomial distribution and a good fit was obtained with the distribution of total season hunting activity and the semi-logarithmic curve. A comparison of the actual seasonal distributions with the questionnaire response distributions revealed that the prestige and memory bias errors are both positive. The comparisons also revealed the tendency for memory bias errors to occur at digit frequencies divisible by five and for prestige bias errors to occur at frequencies which are multiples of the legal daily bag limit. A graphical adjustment of the response distributions was carried out by developing a smooth curve from those frequency classes not included in the predictable biased frequency classes referred to above. Group averages were used in constructing the curve, as suggested by Ezekiel [1950]. The efficiency of the technique described for reducing response bias errors in hunter questionnaire responses on seasonal waterfowl kill is high in large samples. The graphical method is not as efficient in removing response bias errors in hunter questionnaire responses on seasonal hunting activity where an average of 60 percent was removed.

Biometrics↗

USGS1986

RAINFALL-LOSS PARAMETER ESTIMATION FOR ILLINOIS.

The U. S. Geological Survey is currently conducting an investigation to estimate values of parameters for two rainfall-loss computation methods used in a commonly used flood-hydrograph model. Estimates of six rainfall-loss parameters are required: four for the Exponential Loss-Rate method and two for the Initial and Uniform Loss-Rate method. Multiple regression analyses on calibrated data from 616 storms at 98 gaged basins are being used to develop parameter-estimating techniques for these six parameters at ungaged basins in Illinois. Parameter-estimating techniques are being verified using data from a total of 105 storms at 35 uncalibrated gaged basins.

Conference Paper↗

USGS2008

An illustrated landslide handbook for developing nations

As landslides continue to be a hazard that account for large numbers of human and animal casualties, property loss, and infrastructure damage, as well as impacts on the natural environment, it is incumbent on developed nations that resources be allocated to educate affected populations in less developed nations, and provide them with tools to effectively manage this hazard. Given that the engineering, planning and zoning, and mitigation techniques for landslide hazard reduction are more accessible to developed nations, it is crucial that such landslide hazard management tools be communicated to less developed nations in a language that is not overly technical, and provides information on basic scientific explanations on where, why and how landslides occur. The experiences of the United States, Canada, and many other nations demonstrate that, landslide science education, and techniques for reducing damaging landslide impacts may be presented in a manner that can be understood by the layperson. There are various methods through which this may be accomplished–community-level education, technology transfer, and active one-on-one outreach to national and local governments, and non-governmental organizations (NGOs), who disseminate information throughout the general population. The population at large can also benefit from the dissemination of landslide information directly to individual community members. The United States Geological Survey and the Geological Survey of Canada have just published and will distribute a universal landslide handbook that can be easily made available to emergency managers, local governments, and individuals. The handbook, “The Landslide Handbook: A Guide to Understanding Landslides” is initially published as U.S. Geological Survey Circular 1325, in English, available in print, and accessible on the internet. It is liberally illustrated with schematics and photographs, and provides the means for a basic understanding of landslides, with clearly-presented examples and explanations. The handbook will first be translated into Chinese, Spanish, and French and as a “public domain” document, it may be used without copyright issues, and will be free of charge to users. Support for users will be provided by both United States and Canadian geological surveys and those desiring more information will be urged to contact landslide personnel at these two agencies, through several means—email, telephone, and (or) FAX.

Conference Paper↗

USGS2010

Computational modeling of bedform evolution in rivers with implications for predictions of flood stage and bed evolution

Uncertainties in flood stage prediction and bed evolution in rivers are frequently associated with the evolution of bedforms over a hydrograph. For the case of flood prediction, the evolution of the bedforms may alter the effective bed roughness, so predictions of stage and velocity based on assuming bedforms retain the same size and shape over a hydrograph will be incorrect. These same effects will produce errors in the prediction of the sediment transport and bed evolution, but in this latter case the errors are typically larger, as even small errors in the prediction of bedform form drag can make very large errors in predicting the rates of sediment motion and the associated erosion and deposition. In situations where flows change slowly, it may be possible to use empirical results that relate bedform morphology to roughness and effective form drag to avoid these errors; but in many cases where the bedforms evolve rapidly and are in disequilibrium with the instantaneous flow, these empirical methods cannot be accurately applied. Over the past few years, computational models for bedform development, migration, and adjustment to varying flows have been developed and tested with a variety of laboratory and field data. These models, which are based on detailed multidimensional flow modeling incorporating large eddy simulation, appear to be capable of predicting bedform dimensions during steady flows as well as their time dependence during discharge variations. In the work presented here, models of this type are used to investigate the impacts of bedform on stage and bed evolution in rivers during flood hydrographs. The method is shown to reproduce hysteresis in rating curves as well as other more subtle effects in the shape of flood waves. Techniques for combining the bedform evolution models with larger-scale models for river reach flow, sediment transport, and bed evolution are described and used to show the importance of including dynamic bedform effects in river modeling. For example calculations for a flood on the Kootenai River, errors of almost 1m in predicted stage and errors of about a factor of two in the predicted maximum depths of erosion can be attributed to bedform evolution. Thus, treating bedforms explicitly in flood and bed evolution models can decrease uncertainty and increase the accuracy of predictions.

Conference Paper↗

USGS1977

Transverse mixing in the Mobile River, Alabama

Transverse dispersion in the Mobile River was measured by (1) ground-based techniques using water samples and a fluorometer and (2) by aerial photography. Magnitude of the transverse mixing coefficient obtained by the two methods was 6.2 feet squared per second (0.58 metre squared per second) and 5.0 feet squared per second (0.46 metre squared per second), respectively. The value of the numerical coefficient k , which relates the transverse mixing coefficient E , to shear velocity U * and average depth of flow, d , by the relationship k = E z / U * d , was 7.2.

Alabama↗

USGS2022

Active‐source interferometry in marine and terrestrial environments: Importance of directionality and stationary phase

We utilize active‐source seismic interferometry with dense seismic arrays both offshore and onland to explore the utility of this method to create virtual sources and reveal body‐wave reflections in these two different environments. We first utilize data from an ocean‐bottom cable (OBC) array in the Gulf of Mexico with equal numbers of sources (160 airgun shots) and receivers (160 ocean‐bottom four‐component sensors). We next use data from a geophone array across the Bighorn Mountains of Wyoming with many receivers (1300 vertical‐component geophones) but a small number of sources (14 borehole active‐source shots). We find that the OBC virtual source results, which produce strong reflections from sub‐seafloor structures, are far superior to the onland results which lack usable reflections, and we explore reasons for these differences through a set of selective stacking approaches. We present techniques to account for the direction the seismic waves travel (directionality) and stationary phase and show that improvements can be made when incorporating these corrections. Although interferometric methods are based on assumptions of large numbers of widely distributed actual sources, we find that selective exclusion of potentially problematic source–receiver pairs can yield improved results. These geometric adjustments to active‐source interferometry methods have utility for dense‐nodal‐array surveys that are now common in academic studies, but that often suffer from sparse source geometry.

Bulletin of the Seismological Society of America↗

USGS1985

Regional magnetotelluric surveys in hydrocarbon exploration, Parana Basin, Brazil

The magnetotelluric geophysical method has been used effectively as a hydrocarbon exploration tool in the intracratonic Parana basin of South America. The Parana basin has an area of about 1,200,000 km 2 (463,000 mi 2 ), extending over portions of Brazil, Paraguay, Uruguay, Argentina, and Bolivia. The Paleozoic marine sedimentary rocks in the Parana basin are covered by the world's most extensive flood basalt complex, making geophysical exploration extremely difficult, although modern seismic techniques recently applied are achieving good results in some areas. The 1-2 km (3,300-6,600 ft) thick surface basalts and buried diabase sills pose no problem for the magnetotelluric method because the natural electromagnetic fields used as the energy source pass easily through the basalt. Data for the regional study were taken on six profiles with soundings spaced 8 to 15 km (5 to 9 mi) apart. The magnetotelluric sounding data outline a linear uplift known as the Ponta Grossa arch. This major structural feature cuts across the northeast-trending intracratonic basin almost perpendicularly, and is injected with numerous diabase dikes. Although its character is reasonably well known in the shallow, eastern parts of the basin, it is poorly delineated in the deeper parts of the basin where promising natural gas zones have been tested in several wells. In the survey area, MT interpretations show that basalts have aggregate thickness of as much as 2 km (6,600 ft), and basement may be as much as 6 km (20,000 ft) below the surface. Over most of the basin, the basalts are covered by Upper Cretaceous to Holocene continental sediments of a few hundred meters thickness and are underlain by 2 to 4 km (6,600 to 13,100 ft) thick Paleozoic sediments with possible hydrocarbon potential. The Ponta Grossa arch is interpreted to be the failed arm of a triple rift system that formed during the separation of the African and South American continents. Shales of the Devonian Ponta Grossa Formation are important Parana basin source rocks for hydrocarbons, as are several Permian units. Significant electrical contrasts occur between the Permian sediments and older units, so that magnetotelluric measurements can give an indication of the regional thickness of the Permian and younger sediments to aid in interpreting hydrocarbon migration patterns and possible trap areas.

Parana Basin↗

USGS2016

Complementary approaches to diagnosing marine diseases: a union of the modern and the classic

Linking marine epizootics to a specific aetiology is notoriously difficult. Recent diagnostic successes show that marine disease diagnosis requires both modern, cutting-edge technology (e.g. metagenomics, quantitative real-time PCR) and more classic methods (e.g. transect surveys, histopathology and cell culture). Here, we discuss how this combination of traditional and modern approaches is necessary for rapid and accurate identification of marine diseases, and emphasize how sole reliance on any one technology or technique may lead disease investigations astray. We present diagnostic approaches at different scales, from the macro (environment, community, population and organismal scales) to the micro (tissue, organ, cell and genomic scales). We use disease case studies from a broad range of taxa to illustrate diagnostic successes from combining traditional and modern diagnostic methods. Finally, we recognize the need for increased capacity of centralized databases, networks, data repositories and contingency plans for diagnosis and management of marine disease.

Philosophical Transactions of the Royal Society B:↗

USGS1995

Surface-geophysical techniques used to detect existing and infilled scour holes near bridge piers

Surface-geophysical techniques were used with a position-recording system to study riverbed scour near bridge piers. From May 1989 to May 1993, Fathometers, fixed- and swept-frequency continuous seismic- reflection profiling (CSP) systems, and a ground-penetrating radar (GPR) system were used with a laser-positioning system to measure the depth and extent of existing and infilled scour holes near bridge piers. Equipment was purchased commercially and modified when necessary to interface the components and (or) to improve their performance. Three 200-kHz black-and-white chart-recording Fathometers produced profiles of the riverbed that included existing scour holes and exposed pier footings. The Fathometers were used in conjunction with other geophysical techniques to help interpret the geophysical data. A 20-kHz color Fathometer delineated scour-hole geometry and, in some cases, the thickness of fill material in the hole. The signal provided subbottom information as deep as 10 ft in fine-grained materials and resolved layers of fill material as thin as 1 ft thick. Fixed-frequency and swept-frequency CSP systems were evaluated. The fixed-frequency system used a 3.5-, 7.0-, or 14-kHz signal. The 3.5-kHz signal penetrated up to 50 ft of fine-grained material and resolved layers as thin as 2.5-ft thick. The 14-kHz signal penetrated up to 20 ft of fine-grained material and resolved layers as thin as 1-ft thick. The swept-frequency systems used a signal that swept from 2- to 16-kHz. With this system, up to 50 ft of penetration was achieved, and fill material as thin as 1 ft was resolved. Scour-hole geometry, exposed pier footings, and fill thickness in scour holes were detected with both CSP systems. The GPR system used an 80-, 100-, or 300-megahertz signal. The technique produced records in water up to 15 ft deep that had a specific conductance less than 200 µS/cm. The 100-MHz signal penetrated up to 40 ft of resistive granular material and resolved layers as thin as 2-ft thick. Scour-hole geometry, the thickness of fill material in scour holes, and riverbed deposition were detected using this technique. Processing techniques were applied after data collection to assist with the interpretation of the data. Data were transferred from the color Fathometer, CSP, and GPR systems to a personal computer, and a commercially available software package designed to process GPR data was used to process the GPR and CSP data. Digital filtering, predictive- deconvolution, and migration algorithms were applied to some of the data. The processed data were displayed and printed as color amplitude or wiggle-trace plots. These processing methods eased and improved the interpretation of some of the data, but some interference from side echoes from bridge piers and multiple reflections remained in the data. The surface-geophysical techniques were applied at six bridge sites in Connecticut. Each site had different water depths, specific conductance, and riverbed materials. Existing and infilled scour holes, exposed pier footings, and riverbed deposition were detected by the surveys. The interpretations of the geophysical data were confirmed by comparing the data with lithologic and (or) probing data.

Connecticut↗

USGS2016

Techniques for monitoring Brachyramphus murrelets: A comparison of radar, autonomous acoustic recording and audio‐visual surveys

Conditions in Alaska, USA, pose a challenge for monitoring populations of Brachyramphus murrelets using standard survey methods, because of strong winds, 2 sympatric species, short nights, and variable nesting habitat. We tested 3 methods for monitoring Brachyramphus murrelets breeding in the Kodiak Archipelago, Alaska, in 2010–2012. In addition to standard audio‐visual and radar methods, we tested—for the first time with murrelets in Alaska—the application of autonomous acoustic recorders for monitoring vocal activity. We completed 74 radar, 124 audio‐visual, and 134 autonomous acoustic surveys, focused on presunrise activity peaks; this yielded 26,375 murrelet detections. Marbled ( B. marmoratus ) and Kittlitz's murrelets ( B. brevirostris ) could not be distinguished using combinations of radar and acoustic recordings; therefore, at‐sea surveys will be required to determine localized species proportions. Of the 3 methods, radar sampled the largest area and detected silently flying murrelets, providing the most reliable data on local populations; however, radar identification of murrelets was unreliable in winds exceeding 18 km/hr. Audio‐visual surveys were useful for species identification and to document behaviors associated with local nesting, whereas autonomous acoustic recorders allowed season‐long monitoring of murrelet vocal activity. Within potential forest‐nesting habitat of marbled murrelets, all 3 methods gave similar measures of presunrise murrelet activity, but only radar reliably sampled murrelets commuting between nest and ocean. Because of their low cost and flexible programming, automated sound recorders offer an affordable way to sample vocal activity prior to more intensive or expensive radar and audio‐visual surveys. We recommend that population monitoring and habitat studies of Brachyramphus murrelets in Alaska include combinations of all 3 methods.

Alaska↗

USGS1982

Measurement of time of travel and dispersion in streams by dye tracing

The use of fluorescent dyes and tracing techniques provides a means for measuring the time-of-travel and dispersion characteristics of steady and gradually varied flow in streams. Measurements of the dispersion and concentration of dyes give insight into the behavior of soluble contaminants that may be introduced into a stream. This manual describes methods of measuring time of travel of water and waterborne solutes by dye tracing. The fluorescent dyes, measuring equipment used, and the field and laboratory procedures are also described. Methods of analysis and presentation to illustrate time-oftravel and dispersion characteristics of streams are provided.

Techniques of Water-Resources Investigations↗

USGS2017

Part I, the development of the method

A freshly exposed surface of obsidian will take up water from the atmosphere to form a hydrated surface layer. This layer has a different density and refractive index than does the remainder of the obsidian. Using special techniques, a thin section of the obsidian cut at right angles to the surface can be prepared. When examined under the microscope the hydrated layer is visible and its thickness can be measured. Photomicrographs of such thin sections are shown. Factors that determine the rate of hydration were considered. Using artifacts from archaeological sites of known age, the influence of temperature, relative humidity, chemical composition of the obsidian, burning and erosion of the obsidian on the rates of hydration was determined. Temperature and chemical composition are the main factors controlling the rate of hydration. Obsidian hydrates more rapidly at a higher temperature, and thus progresses at a faster rate in tropical than in arctic climates. Rhyolitic obsidian hydrates more slowly than does trachytic obsidian. Using archaeological data from various parts of the world, several tentative hydration rates were determined for tropical, temperate, and arctic climates. The method in its present state of development is especially suited to determine relative chronologies in layered sequences of artifacts from a single site, or region. It is also useful for detecting fake artifacts. Future work to refine the method is suggested.

American Antiquity↗

USGS2017

Optimization of on-line hydrogen stable isotope ratio measurements of halogen- and sulfur-bearing organic compounds using elemental analyzer–chromium/high-temperature conversion isotope ratio mass spectrometry (EA-Cr/HTC-IRMS)

Rationale: Accurate hydrogen isotopic analysis of halogen- and sulfur-bearing organics has not been possible with traditional high-temperature conversion (HTC) because the formation of hydrogen-bearing reaction products other than molecular hydrogen (H2) is responsible for non-quantitative H2 yields and possible hydrogen isotopic fractionation. Our previously introduced, new chromium-based EA-Cr/HTC-IRMS (Elemental Analyzer–Chromium/High-Temperature Conversion Isotope Ratio Mass Spectrometry) technique focused primarily on nitrogen-bearing compounds. Several technical and analytical issues concerning halogen- and sulfur-bearing samples, however, remained unresolved and required further refinement of the reactor systems. Methods: The EA-Cr/HTC reactor was substantially modified for the conversion of halogen- and sulfur-bearing samples. The performance of the novel conversion setup for solid and liquid samples was monitored and optimized using a simultaneously operating dual-detection system of IRMS and ion trap MS. The method with several variants in the reactor, including the addition of manganese metal chips, was evaluated in three laboratories using EA-Cr/HTC-IRMS (on-line method) and compared with traditional uranium-reduction-based conversion combined with manual dual-inlet IRMS analysis (off-line method) in one laboratory. Results: The modified EA-Cr/HTC reactor setup showed an overall H2-recovery of more than 96% for all halogen- and sulfur-bearing organic compounds. All results were successfully normalized via two-point calibration with VSMOW-SLAP reference waters. Precise and accurate hydrogen isotopic analysis was achieved for a variety of organics containing F-, Cl-, Br-, I-, and S-bearing heteroelements. The robust nature of the on-line EA-Cr/HTC technique was demonstrated by a series of 196 consecutive measurements with a single reactor filling. Conclusions: The optimized EA-Cr/HTC reactor design can be implemented in existing analytical equipment using commercially available material and is universally applicable for both heteroelement-bearing and heteroelement-free organic-compound classes. The sensitivity and simplicity of the on-line EA-Cr/HTC-IRMS technique provide a much needed tool for routine hydrogen-isotope source tracing of organic contaminants in the environment. Copyright © 2016 John Wiley & Sons, Ltd.

Rapid Communications in Mass Spectrometry↗

USGS1996

Inductively coupled plasma-mass spectrometric method for the determination of dissolved trace elements in natural water

An inductively coupled plasma-mass spectrometry method was developed for the determination of dissolved Al, As, B, Ba, Be, Cd, Co, Cr, Cu, Li, Mn, Mo, Ni, Pb, Sr, Tl, U, V, and Zn in natural waters. Detection limits are generally in the 50-100 picogram per milliliter (pg/mL) range, with the exception of As which is in the 1 microgram per liter (ug/L) range. Interferences associated with spectral overlap from concomitant isotopes or molecular ions and sample matrix composition have been identified. Procedures for interference correction and reduction related to isotope selection, instrumental operating conditions, and mathematical data processing techniques are described. Internal standards are used to minimize instrumental drift. The average analytical precision attainable for 5 times the detection limit is about 16 percent. The accuracy of the method was tested using a series of U.S. Geological Survey Standard Reference Water Standards (SWRS), National Research Council Canada Riverine Water Standard, and National Institute of Standards and Technology (NIST) Trace Elements in Water Standards. Average accuracies range from 90 to 110 percent of the published mean values.

Open-File Report↗

USGS2017

Using high-throughput DNA sequencing, genetic fingerprinting, and quantitative PCR as tools for monitoring bloom-forming and toxigenic cyanobacteria in Upper Klamath Lake, Oregon, 2013 and 2014

Monitoring the community structure and metabolic activities of cyanobacterial blooms in Upper Klamath Lake, Oregon, is critical to lake management because these blooms degrade water quality and produce toxic microcystins that are harmful to humans, domestic animals, and wildlife. Genetic tools, such as DNA fingerprinting by terminal restriction fragment length polymorphism (T-RFLP) analysis, high-throughput DNA sequencing (HTS), and real-time, quantitative polymerase chain reaction (qPCR), provide more sensitive and rapid assessments of bloom ecology than traditional techniques. The objectives of this study were (1) to characterize the microbial community at one site in Upper Klamath Lake and determine changes in the cyanobacterial community through time using T-RFLP and HTS in comparison with traditional light microscopy; (2) to determine relative abundances and changes in abundance over time of toxigenic Microcystis using qPCR; and (3) to determine relative abundances and changes in abundance over time of Aphanizomenon , Microcystis , and total cyanobacteria using qPCR. T-RFLP analysis of total cyanobacteria showed a dominance of only one or two distinct genotypes in samples from 2013, but results of HTS in 2013 and 2014 showed more variations in the bloom cycle that fit with the previous understanding of bloom dynamics in Upper Klamath Lake and indicated that potentially toxigenic Microcystis was more prevalent in 2014 than in years prior. The qPCR-estimated copy numbers of all target genes were higher in 2014 than in 2013, when microcystin concentrations also were higher. Total Microcystis density was shown with qPCR to be a better predictor of late-season increases in microcystin concentrations than the relative proportions of potentially toxigenic cells. In addition, qPCR targeting Aphanizomenon at one site in Upper Klamath Lake indicated a moderate bloom of this species (corresponding to chlorophyll a concentrations between approximately 75 and 200 micrograms per liter) from mid-June to mid-August, 2014. After August 18, the Aphanizomenon bloom was overtaken by Microcystis late in the season as microcystin concentrations peaked. Overall, results of this study showed how DNA-based, genetic methods may provide rapid and sensitive diagnoses for the presence of toxigenic cyanobacteria and that they are useful for general monitoring or ecological studies and identification of cyanobacterial community members in complex aquatic habitats. These same methods can also be used to simultaneously address spatial (horizontal and vertical) and temporal variation and under different conditions. Additionally, with some modifications, the same techniques can be applied to different sample types, including water, sediment, and tissue.

Oregon↗