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Integrated tools for identifying optimal flow regimes and evaluating alternative minimum flows for recovering at-risk salmonids in a highly managed system

Water resource managers are faced with difficult decisions on how to satisfy human water needs while maintaining or restoring riverine ecosystems. Decision sciences have developed approaches and tools that can be used to break down difficult water management decisions into their component parts. An essential aspect of these approaches is the use of quantitative models to evaluate alternative management strategies. Here, we describe four integrated decision support models for evaluating the effect of flows on two life history stages of Chinook salmon ( Oncorhynchus tshawytscha ) and Steelhead ( O. mykiss ). We then use constrained nonlinear optimization to identify optimal flow regimes for the water year type with the least available water. These flow regimes were then used by managers to develop candidate minimum flow strategies that were evaluated using forward simulation and sensitivity analyses. We found that optimal flow regimes differed markedly from existing regulations and varied among species and life history stages. However, evaluation of tradeoffs among the four competing objectives indicated relatively minimal losses for most objectives when the optimal flows were based on equally weighting the objectives. Sensitivity analysis indicated that water temperature was the primary driver of estimated outcomes and suggested that managers consider alternative means of managing temperatures. Decision sciences have created multiple analytical tools and approaches that simplify complex problems, such as water resource management, and we believe that water resource management would benefit from their increased use.

Oregon↗

Ground water and climate change

As the world's largest distributed store of fresh water, ground water plays a central part in sustaining ecosystems and enabling human adaptation to climate variability and change. The strategic importance of ground water for global water and food security will probably intensify under climate change as more frequent and intense climate extremes (droughts and floods) increase variability in precipitation, soil moisture and surface water. Here we critically review recent research assessing the impacts of climate on ground water through natural and human-induced processes as well as through groundwater-driven feedbacks on the climate system. Furthermore, we examine the possible opportunities and challenges of using and sustaining groundwater resources in climate adaptation strategies, and highlight the lack of groundwater observations, which, at present, limits our understanding of the dynamic relationship between ground water and climate.

Nature Climate Change↗

Tetlin National Wildlife Refuge land cover mapping project users guide

Title III of the Alaska National Interest Lands Conservation Act of 1980 (ANILCA, 1980) established the Tetlin National Wildlife Refuge (TNWR). Section 304 of the Act requires the Secretary of Interior to "prepare, and from time to time revise, a comprehensive conservation plan" for the refuge. Before developing a plan for the refuge, the Secretary shall identify and describe--a) the populations and habitats of the fish and wildlife resources of the refuge; b) the special values of the refuge as well as any other archeological, cultural, ecological, geological, historical, palentological, scenic, or wilderness value of the refuge; c) areas within the refuge that are suitable for use as administrative sites or visitor facilities… ; d) present the potential requirements for access with respect to the refuge… ; and e) significant problems which may adversely affect the populations and habitats of fish and wildlife identified and described... (ANILCA, 1980). Vegetation, water, and terrain (elevation, slope, and aspect) are the components of habitat and can be used in the determination of the above requirements. The U. S. Fish & Wildlife Service (USFWS) has the responsibility for collecting the resource information to address the research, management, development and planning requirements identified in Section 304. Because of the brief period provided by the Act for data collection, habitat mapping, and habitat assessment, the USFWS in cooperation with the U.S. Geological Survey's EROS Field Office, used digital Landsat multispectral scanner data (MSS) and digital terrain data to produce land cover and terrain maps. A computer assisted digital analysis of Landsat MSS data was used because coverage by aerial photographs was incomplete for much of the refuge and because the level of detail, obtained from the analysis of Landsat data, is adequate to meet most USFWS research, management and planning needs. Relative cost and time requirements were also factors in the decision to use the digital analysis approach.

Alaska↗

Water-data program of the U.S. Geological Survey

The U.S. Geological Survey is the principal Federal agency responsible for the collection of hydrologic data needed for the planning, development, use, and management of the Nation 's water resources. These data are the foundation necessary for conducting analytical and interpretive appraisals describing the occurrence and availability of surface and ground waters, and their physical, chemical, and biological characteristics. The data are likewise required for basic and problem-oriented research in hydraulics, hydrology, and related fields. Hydrologic data collection by the Geological Survey began in 1894. Current operations include about 17,000 stations for collection of river, lake, and reservoir data; about 27,000 wells for collection of ground-water data; and almost 17,000 stations for collection of water-quality information. These activities are described as well as the means by which the data are made available, and how the program is coordinated with other agencies. (USGS)

Circular↗

National Climate Change and Wildlife Science Center project accomplishments: highlights

The National Climate Change and Wildlife Science Center (NCCWSC) has invested more than $20M since 2008 to put cutting-edge climate science research in the hands of resource managers across the Nation. With NCCWSC support, more than 25 cooperative research initiatives led by U.S. Geological Survey (USGS) researchers and technical staff are advancing our understanding of habitats and species to provide guidance to managers in the face of a changing climate. Projects focus on quantifying and predicting interactions between climate, habitats, species, and other natural resources such as water. Spatial scales of the projects range from the continent of North America, to a regional scale such as the Pacific Northwest United States, to a landscape scale such as the Florida Everglades. Time scales range from the outset of the 20th century to the end of the 21st century. Projects often lead to workshops, presentations, publications and the creation of new websites, computer models, and data visualization tools. Partnership-building is also a key focus of the NCCWSC-supported projects. New and on-going cooperative partnerships have been forged and strengthened with resource managers and scientists at Federal, tribal, state, local, academic, and non-governmental organizations. USGS scientists work closely with resource managers to produce timely and relevant results that can assist managers and policy makers in current resource management decisions. This fact sheet highlights accomplishments of five NCCWSC projects.

Fact Sheet↗

Streambed stability and scour potential at selected bridge sites in Michigan

Contraction scour in the main stream channel at a bridge and local scour near piers and abutments can result in bridge failure. Estimates of contraction-scour and local-scour potentials associated with the 100-year flood were computed for 13 bridge sites in Michigan by use of semi-theoretical equations and procedures recommended by the Federal Highway Administration. These potentials were compared with measures of Streambed stability obtained by use of data from 773 historical streamflow measurements, documenting 20,741 individual Streambed soundings between 1959 and 1995. Analysis of these data indicate small, but statistically significant, monotonic trends in Streambed elevation at 10 sites. No consistent patterns in relations between changes in Streambed elevations and streamflow, flow velocity, or flow depth were evident. Also, estimates of contraction-scour potential were not correlated with measures of Streambed stability, and no differences were detected between measures of Streambed stability in the main channel and stability adjacent to piers. Despite the inconsistencies between measures of Streambed stability and scour potential, data from a single, large flood (greater than a 100-year event) provided field evidence that the relation between scour and streamflow is highly nonlinear. This nonlinearity and the limited availability of measurements of extreme flood events may have reduced the utility of the empirical measures for confirming the nonlinear scour-potential equations and procedures. Results of field surveys using ground-penetrating radar and tuned transducers showed limited ability to aid interpretation of historical scour conditions at four bridge sites. Additional research is needed to confirm the applicability of scour-potential equations for hydrogeologic conditions in Michigan.

Michigan↗

Yukon Flats National Wildlife Refuge land cover mapping project user's guide

Title III of the Alaska National Interest Lands Conservation Act (ANILCA, 1980) established the Yukon Flats National Wildlife Refuge (YFNWR). Section 304 of the Act requires the Secretary of Interior to "prepare, and from time to time revise, a comprehensive conservation plan" for the refuge. Before developing a plan for the refuge, the Secretary shall "identify and describe--a) the populations and habitats of the fish and wildlife resources of the refuge; b) the special values of the refuge as well as any other archeological, cultural, ecological, geological , historical, palentological, scenic, or wilderness value of the refuge; c) areas within the refuge that are suitable for use as administrative sites or visitor facilities...; d) present the potential requirements for access with respect to the refuge...; and e) significant problems which may adversely affect the populations and habitats of fish and wildlife identified and described..." (ANILCA, 1980). Vegetation, water, and terrain (elevation, slope, and aspect) are the components of habitat and can be used in the determination of the above requirements. The U. S. Fish & Wildlife Service (USFWS) has the responsibility for collecting the resource information to address the research, management, development and planning requirements identified in Section 304. Because of the brief period provided by the Act for data collection, habitat mapping, and habitat assessment, the USFWS in cooperation with the U.S. Geological Survey's EROS Field Office, used digital Landsat multispectral scanner (MSS) data and digital terrain data to produce land cover and terrain maps. A computer assisted digital analysis of Landsat MSS data was used because coverage by aerial photographs was incomplete for much of the refuge and because the level of detail obtained from Landsat data was adequate to meet most USFWS research, management and planning needs. Relative cost and time requirements were also factors in the decision to use the digital analysis approach.

Alaska↗

Effects of climate variability and human activities on Chesapeake Bay and the implications for ecosystem restoration

Chesapeake Bay, the Nation’s largest and most productive estuary (fig. 1), faces complex environmental issues related to nutrients and oxygen, turbidity and sedimentation, toxic dinoflagellates, sea-level rise, and coastal erosion. The Chesapeake Bay Program (CBP) is a partnership among the Chesapeake Bay Commission, the Federal Government, the District of Columbia, and the States of Maryland, Virginia, and Pennsylvania. The CBP is working to preserve, restore, and protect the bay’s living resources, vital habitats, and water quality, to protect human health, and to promote sound land-use policies in the watershed. The CBP began to set restoration goals for the ecosystem in the mid-1980’s and is now refining current goals and setting new ones as part of a new bay agreement— Chesapeake 2000. As the CBP sets restoration goals for the next 10–20 years, it will be critical to understand the long-term changes of the bay ecosystem due to climate variability and the influence of past and future human activities. For the past 4 years, the U.S. Geological Survey (USGS) has been engaged in research designed to provide objective scientific answers to questions about long-term changes in the bay ecosystem: What paleoecological and geochemical methods are best for documenting trends in the bay ecosystem? How does climate variability, including drought, affect the bay? What are historical trends in dissolved oxygen? What is the relationship between sedimentation and water clarity, and what is the effect of turbidity on living resources? How have past land-use changes affected bay habitats and living resources?

Chesapeake Bay Watershed↗

Preserving and increasing water resources—Natural infrastructure in dryland streams in Baja California Sur, Mexico

The Los Planes watershed of Baja California Sur, Mexico, and its underlying aquifer are experiencing groundwater decline owing to low average annual rainfall (28.1 centimeters per year) and rising water demand from population growth and agricultural activities. This decline in water availability can lead to desertification—a process that changes arable land to desert by degrading soil and vegetation—and can pose serious challenges to livelihoods that depend on the land. To address these issues, a ranch in the Los Planes watershed has installed many natural infrastructures in dryland streams (NIDS) in channels for soil and water conservation. In 2022, the U.S. Geological Survey (USGS) began working with regional researchers and land managers to investigate the effects of NIDS on natural biological, geochemical, and physical processes and determine the efficacy of NIDS for water augmentation in the Los Planes watershed. The USGS also worked with local academic institutions and nonprofit organizations to create public educational opportunities focused on the area’s hydrogeology. These and other collaborative efforts with the U.S. Water Partnership and Innovaciones Alumbra aim at enhancing water resources in the Baja California Sur region and promoting water security and safeguarding community well-being. Resume La cuenca de Los Planes, ubicada en Baja California Sur, México, y su acuífero subyacente, están sufriendo una disminución de las aguas subterráneas debido a la baja precipitación media anual (28.1 centímetros por año) y la alta demanda de agua por parte de una población creciente y la actividad agrícola. Esta disminución de la disponibilidad de agua puede conducir a la desertificación—un proceso que por medio de la degradación del suelo y la vegetación convierte a la tierra cultivable en desierto—representando un serio desafío para los medios de vida de las personas. Para abordar estos problemas, un rancho en la cuenca de Los Planes ha instalado numerosas obras de Infraestructura Natural en Arroyos de Tierras Áridas (INATS) para conservación del suelo y del agua. En 2022, el Servicio Geológico de los Estados Unidos (USGS, por sus siglas en inglés) comenzó a trabajar con investigadores regionales y gestores de tierras para estudiar los efectos de INATS en los procesos biológicos, geoquímicos y físicos, y determinar su eficacia en el aumento de los recursos hídricos en la cuenca de Los Planes. El USGS se ha asociado con instituciones académicas y organizaciones locales sin fines de lucro para crear oportunidades educativas públicas centradas en la hidrogeología de la zona. Estos y otros esfuerzos colaborativos con la Asociación del Agua de Estados Unidos (U.S. Water Partnership) e Innovaciones Alumbra, tienen como objetivo mejorar el uso de los recursos hídricos en la región de Baja California Sur, promover la seguridad hídrica y proteger el bienestar de la comunidad.

Baja California Sur↗

San Pedro River Aquifer Binational Report

The United States and Mexico share waters in a number of hydrological basins and aquifers that cross the international boundary. Both countries recognize that, in a region of scarce water resources and expanding populations, a greater scientific understanding of these aquifer systems would be beneficial. In light of this, the Mexican and U.S. Principal Engineers of the International Boundary and Water Commission (IBWC) signed the “Joint Report of the Principal Engineers Regarding the Joint Cooperative Process United States-Mexico for the Transboundary Aquifer Assessment Program" on August 19, 2009 (IBWC-CILA, 2009). This IBWC “Joint Report” serves as the framework for U.S.-Mexico coordination and dialogue to implement transboundary aquifer studies. The document clarifies several details about the program such as background, roles, responsibilities, funding, relevance of the international water treaties, and the use of information collected or compiled as part of the program. In the document, it was agreed by the parties involved, which included the IBWC, the Mexican National Water Commission (CONAGUA), the U.S. Geological Survey (USGS), and the Universities of Arizona and Sonora, to study two priority binational aquifers, one in the San Pedro River basin and the other in the Santa Cruz River basin. This report focuses on the Binational San Pedro Basin (BSPB). Reasons for the focus on and interest in this aquifer include the fact that it is shared by the two countries, that the San Pedro River has an elevated ecological value because of the riparian ecosystem that it sustains, and that water resources are needed to sustain the river, existing communities, and continued development. This study describes the aquifer’s characteristics in its binational context; however, most of the scientific work has been undertaken for many years by each country without full knowledge of the conditions on the other side of the border. The general objective of this study is to use new and existing research to define the general hydrologic framework of the Binational San Pedro Aquifer (BSPA), to gather hydrogeological and other relevant data in preparation for future work such as an updated groundwater conceptual model and budget and to establish the basis for a binational numerical model. The specific objectives are as follows: Understand the current state of knowledge with respect to climate, geology, soils, land cover, land use, and hydrology of the aquifer in its binational context; Compile and create a database of scientific information from both countries; Identify data gaps and identify what data would be necessary to update, in a subsequent phase, the hydrologic model of the aquifer system, including surface- and groundwater interactions on a binational level. The BSPB is one of the most studied basins in the region, and a database of publications has been compiled as part of this project. Previous studies include topics that range from geophysics and hydrogeology to biology and ecosystem services. The economic drivers on each side of the border are quite different. In the Arizona 4 portion of the basin military and tourism dominate while in the Sonoran portion, mining is the most important industry. Water management is also different in the two countries. In Mexico, primary authority for management of water resources devolves from the federal government. In the United States, primary authority rests with the states except in cases of interstate surface waters. Binational waters are not currently jointly managed by the two countries except in cases where treaties have been negotiated such as for the Rio Grande and Colorado Rivers. Thus, there is currently no binational coordination or treaty governing the management of groundwater.

Report↗

Lower Eastern Shore Tributary summary: A summary of trends in tidal water quality and associated factors, 1985-2023

The Lower Eastern Shore Tributary Summary outlines change over time according to a suite of monitored tidal water quality parameters and associated potential drivers of those trends for the period 1985 – 2023, and provides a brief description of the current state of knowledge explaining these observed changes. Water quality parameters described include surface (above pycnocline) total nitrogen (TN), surface total phosphorus (TP), surface water temperature (WTEMP), spring (March-May) and summer (July-September) surface chlorophyll a, summer bottom (below pycnocline) dissolved oxygen (DO) concentrations, and Secchi disk depth (a measure of water clarity). Results for annual bottom TP, bottom TN, surface ortho-phosphate (PO4), surface dissolved inorganic nitrogen (DIN), surface total suspended solids (TSS), and summer surface DO concentrations are provided in an Appendix B. Drivers discussed include physiographic watershed characteristics, changes in TN, TP, and sediment loads from the watershed to tidal waters, expected effects of changing land use, and implementation of nutrient management and natural resource conservation practices. Factors internal to estuarine waters that also play a role as drivers are described including biogeochemical processes, physical forces such as winddriven mixing of the water column and increase in rainfall intensity and volume, and biological factors such as phytoplankton biomass and the presence of submersed aquatic vegetation. Continuing to track water quality response and investigating these influencing factors are important steps to understanding water quality patterns and changes in the Lower Eastern Shore. The intended audiences for this report include, but are not limited to, 1) technical managers within jurisdictions who use tidal water quality to inform management decisions, 2) local watershed organizations that are trying to understand these analyses and working to connect them to their local area(s), and 3) federal, state, and academic researchers. Figure 1 presents a conceptual model highlighting these intended audiences. The Tributary Summary documents are sources of readily available background for change over time in tidal water quality observed with monitoring data. They help answer questions related to water quality, show how landscape factors drive water-quality changes over time, provide support for management decisions that may alter water quality trends and living resources conditions, and highlight where there may be information or knowledge gaps.

Maryland, Virginia↗

An evaluation of the relations between flow regime components, stream characteristics, species traits and meta-demographic rates of warmwater stream fishes: Implications for aquatic resource management

Fishery biologists are increasingly recognizing the importance of considering the dynamic nature of streams when developing streamflow policies. Such approaches require information on how flow regimes influence the physical environment and how those factors, in turn, affect species-specific demographic rates. A more cost-effective alternative could be the use of dynamic occupancy models to predict how species are likely to respond to changes in flow. To appraise the efficacy of this approach, we evaluated relative support for hypothesized effects of seasonal streamflow components, stream channel characteristics, and fish species traits on local extinction, colonization, and recruitment (meta-demographic rates) of stream fishes. We used 4 years of seasonal fish collection data from 23 streams to fit multistate, multiseason occupancy models for 42 fish species in the lower Flint River Basin, Georgia. Modelling results suggested that meta-demographic rates were influenced by streamflows, particularly short-term (10-day) flows. Flow effects on meta-demographic rates also varied with stream size, channel morphology, and fish species traits. Small-bodied species with generalized life-history characteristics were more resilient to flow variability than large-bodied species with specialized life-history characteristics. Using this approach, we simplified the modelling framework, thereby facilitating the development of dynamic, spatially explicit evaluations of the ecological consequences of water resource development activities over broad geographic areas. Published 2014. This article is a U.S. Government work and is in the public domain in the USA.

Georgia↗

Ground-water levels in observation wells in Oklahoma, 1969-70

The investigation of the ground-water resources of Oklahoma by the U.S. Geological Survey in cooperation with the Oklahoma Water Resources Board includes a continuing program to collect records of water levels in selected observation wells on a systematic basis. These water-level records: (1) provide an index to available ground-water supplies; (2) facilitate the prediction of trends in water levels that will indicate likely changes in storage; (3) aid in the prediction of the base flow of streams; (4) provide information for use in basic research; (5) provide long-time continuous records of fluctuations of water levels in representative wells; and (6) serve as a framework to which other types of hydrologic data my be related. Prior to 1956, measurements of water levels in observation wells in Oklahoma were included in water-supply papers published annually by the U.S. Geological Survey. Beginning with the 1956 calendar year, however, Geological Survey water-level reports will contain only records of a selected network of observation wells, and will be published at 5-year intervals. The first of this series, for the 1956-59 period was published in 1962. In addition to the water-supply papers, the U.S. Geological Survey, cooperation with the Oklahoma Water Resources Board, has published the following informal reports on water levels in Oklahoma. Ground-water levels in observations wells in Oklahoma, 1956-60 Ground-water levels in observations wells in Oklahoma, 1961-62 Ground-water levels in observations wells in Oklahoma, 1963-64 Ground-water levels in observations wells in Oklahoma, 1965-66 Ground-water levels in observations wells in Oklahoma, 1967-68 Records of water-level measurements in wells in the Oklahoma Panhandle, 1966-70 Records of water-level measurements in wells in the Oklahoma Panhandle, 1971-72 The basic observation-well network in Oklahoma during the period 1969-70 included the following counties: Alfalfa, Beaver, Beckham, Caddo, Cimarron, Cleveland, Garfield, Garvin, Grady, Greer, Harmon, Jackson, Kingfisher, LeFlore, Major, Muskogee, Oklahoma, Payne, Pontotoc, Rogers, Sequoyah, Texas, Tillman, Wagoner, Washita, and Woodward. Table 2 includes the basic observation-well network and other wells measured by the U.S. Geological Survey. The data in this report were compiled and prepared for publication under the cooperative agreement for ground-water investigations in Oklahoma between the Oklahoma Water Resources Board, the U.S. Army Corps of Engineers, the Oklahoma Geological Survey, and the U.S. Geological Survey.

Oklahoma↗

Investigation of wind and water level for the Giacomini Wetland Restoration Project, Point Reyes National Seashore

Point Reyes National Seashore (PRNS), comprising unique elements of geological, biological, and historical interest, is located on the central California coast approximately 60 km northwest of San Francisco. The National Seashore contains nearly 130 km of exposed and protected shorelines, spectacular coastal cliffs and headlands, lagoons, open grasslands, bushy hillsides, and forested ridges. Approximately 30 km of the shoreline are coastal-dune habitat that supports 11 federally listed species, including the threatened western snowy plover and the endangered plants Tidestrom's lupine ( Lupinus tidestromii ) and beach layia ( Layia carnosa ). The San Andreas Fault, a right-lateral strike-slip fault, trends northwest along the northeastern side of the park. Tomales Bay, which is straight, long, narrow, and shallow, runs along the northeastern boundary of PRNS. The Bay, which fills the northwestern end of a rift valley at the intersection of the San Andreas Fault with the coastline, is approximately 20 km long, 2 km wide, and 6 m deep with mountainous terrain to the southwest and rolling hills to the northeast. Tomales Bay is one of the cleanest estuaries on the West Coast. In winter, approximately 17,000 to 20,000 shorebirds inhabit Tomales Bay and Bodega Bay, which lies directly to the north. At the head of Tomales Bay, the Giacomini Ranch comprises 563 acres of pastureland currently being used for grazing dairy cattle. After more than 50 years of operation as a dairy, the National Park Service acquired the Giacomini property with the intention to restore most of it and the nearby Olema Marsh to tidal wetland. Restoration will add approximately 4% to the existing coastal wetlands in California. The project will return the headwaters of Tomales Bay and two major stream intersections to an intertidal marsh environment, enhancing habitat for both wildlife and fish populations and contributing to the long-term health of Tomales Bay. Prior to the establishment of the ranch, the area was primarily salt marsh that formed as the delta of Lagunitas Creek expanded into Tomales Bay. In converting the salt marsh to dairy land, levees and tide gates were constructed to prevent tidal incursion and stream flooding. Those levees have significantly altered the patterns of estuarine circulation and sediment deposition. To restore natural hydrologic processes within the area and to promote the return of ecological functions and processes, the levees will have to be breached or removed. Developing a successful restoration strategy requires knowledge of elevations within the pastureland and the range of water depths that can be expected from tidal, river, and wind action. In support of the restoration program, the USGS provides technical assistance to PRNS in the form of a scientific study focusing on understanding the physical processes that could affect the Giacomini wetland restoration. The study will yield scientific products that NPS resource managers can use in designing and implementing the restoration project. Research elements include: - Develop a Geodetic Control Network (GCN) throughout PRNS that meets the standards specified National Geodetic Survey data base (the NGS "Bluebook"). The grid will allow this and future studies to be conducted to a precision commensurate with the expressed goals of PRNS. The survey will consist of three steps: (1) verify existing GPS control monuments in the area; (2) tie control monuments in the study areas to the GPS control monuments; and (3) establish NAVD88 elevations using a digital electronic level. - Conduct a detailed survey of the Giacomini site to produce an accurate topographic map of the property. The site survey can be coupled with on-site water-level measurements to produce an empirical flooding model. - Measure water level and wind regime at the Giacomini site. The water-level range is critical to determining the wetland types based on the elevation of the dairy land. Water level at Sacramento Landing, in central Tomales Bay, will also be measured for comparison. As of November 2005, we have created a GCN, produced a detailed topographic map of the Giacomini site, and collected approximately three years of water-level and wind data at the Giacomini site and over one year of usable water-level data at the Sacramento Landing pier.

California↗

Protocols for collecting and processing macroinvertebrates from the benthos and water column in depressional wetlands

Freshwater aquatic macroinvertebrates are key links in food webs and nutrient cycles, and thus often serve as biological indicators of ecosystem health. Macroinvertebrate investigations in research and monitoring require consistent and reliable field and laboratory procedures. Comprehensive standard operating procedures for sampling macroinvertebrates from depressional wetlands, which can range from riverine floodplain lakes to wetlands of any size and hydrologic regime, remain relatively sparse. This report provides step-by-step protocols for efficient use of time and resources while collecting and processing aquatic macroinvertebrate samples; for example, a single wetland can typically be field surveyed in less than 1 hour, and the samples can be processed in the laboratory in less than 2 hours. Samples can be collected from inside a motorboat or canoe or while wading. This procedures manual describes dip netting to collect macroinvertebrates from the wetland bottom and water column separately to facilitate investigations of habitat use by species occupying different areas of the wetland. This report also provides descriptive supplemental materials and data sheets to assist with the preparation of survey maps, the acquisition of field and laboratory equipment, and the calculation of macroinvertebrate densities from the wetland bottom and water column. These procedures can be applied to most macroinvertebrate species and communities that inhabit a variety of wetland sizes and types. Uses and applications can range from elementary and secondary environmental education to rigorous scientific evaluations of community abundance, diversity, distribution, or species-habitat relations.

Open-File Report↗

Natural-color and color-infrared image mosaics of the Colorado River corridor in Arizona derived from the May 2009 airborne image collection

The Grand Canyon Monitoring and Research Center (GCMRC) of the U.S. Geological Survey (USGS) periodically collects airborne image data for the Colorado River corridor within Arizona (fig. 1) to allow scientists to study the impacts of Glen Canyon Dam water release on the corridor’s natural and cultural resources. These data are collected from just above Glen Canyon Dam (in Lake Powell) down to the entrance of Lake Mead, for a total distance of 450 kilometers (km) and within a 500-meter (m) swath centered on the river’s mainstem and its seven main tributaries (fig. 1). The most recent airborne data collection in 2009 acquired image data in four wavelength bands (blue, green, red, and near infrared) at a spatial resolution of 20 centimeters (cm). The image collection used the latest model of the Leica ADS40 airborne digital sensor (the SH52), which uses a single optic for all four bands and collects and stores band radiance in 12-bits. Davis (2012) reported on the performance of the SH52 sensor and on the processing steps required to produce the nearly flawless four-band image mosaic (sectioned into map tiles) for the river corridor. The final image mosaic has a total of only 3 km of surface defects in addition to some areas of cloud shadow because of persistent inclement weather during data collection. The 2009 four-band image mosaic is perhaps the best image dataset that exists for the entire Arizona part of the Colorado River. Some analyses of these image mosaics do not require the full 12-bit dynamic range or all four bands of the calibrated image database, in which atmospheric scattering (or haze) had not been removed from the four bands. To provide scientists and the general public with image products that are more useful for visual interpretation, the 12-bit image data were converted to 8-bit natural-color and color-infrared images, which also removed atmospheric scattering within each wavelength-band image. The conversion required an evaluation of the histograms of each band’s digital-number population within each map tile throughout the corridor and the determination of the digital numbers corresponding to the lower and upper one percent of the picture-element population within each map tile. Visual examination of the image tiles that were given a 1-percent stretch (whereby the lower 1- percent 12-bit digital number is assigned an 8-bit value of zero and the upper 1-percent 12-bit digital number is assigned an 8-bit value of 255) indicated that this stretch sufficiently removed atmospheric scattering, which provided improved image clarity and true natural colors for all surface materials. The lower and upper 1-percent, 12-bit digital numbers for each wavelength-band image in the image tiles exhibit erratic variations along the river corridor; the variations exhibited similar trends in both the lower and upper 1-percent digital numbers for all four wavelength-band images (figs. 2–5). The erratic variations are attributed to (1) daily variations in atmospheric water-vapor content due to monsoonal storms, (2) variations in channel water color due to variable sediment input from tributaries, and (3) variations in the amount of topographic shadows within each image tile, in which reflectance is dominated by atmospheric scattering. To make the surface colors of the stretched, 8-bit images consistent among adjacent image tiles, it was necessary to average both the lower and upper 1-percent digital values for each wavelength-band image over 20 river miles to subdue the erratic variations. The average lower and upper 1-percent digital numbers for each image tile (figs. 2–5) were used to convert the 12-bit image values to 8-bit values and the resulting 8-bit four-band images were stored as natural-color (red, green, and blue wavelength bands) and color-infrared (near-infrared, red, and green wavelength bands) images in embedded geotiff format, which can be read and used by most geographic information system (GIS) and image-processing software. The tiff world files (tfw) are provided, even though they are generally not needed for most software to read an embedded geotiff image. All image data are projected in the State Plane (SP) map projection using the central Arizona zone (202) and the North American Datum of 1983 (NAD83). The map-tile scheme used to segment the corridor image mosaic followed the standard USGS quarter-quadrangle (QQ) map borders, but the high resolution (20 cm) of the images required further quarter segmentation (QQQ) of the standard QQ tiles, where the image mosaic covered a large fraction of a QQ map tile (segmentation shown in (figure 6), where QQ_1 to QQ_4 shows the number convention used to designate a quarter of a QQ tile). To minimize the size of each image tile, each image or map tile was subset to only include that part of the tile that had image data. In addition, some QQQ image tiles within a QQ tile were combined when adjacent QQQ map tiles were small. Thus, some image tiles consist of combinations of QQQ map tiles, some consist of an entire QQ map tile, and some consist of two adjoining QQ map tiles. The final image tiles number 143, which is a large number of files to list on the Internet for both the natural-color and color-infrared images. Thus, the image tiles were placed in seven file folders based on the one-half-degree geographic boundaries within the study area (fig. 7). The map tiles in each file folder were compressed to minimize folder size for more efficient downloading. The file folders are sequentially referred to as zone 1 through zone 7, proceeding down river (fig. 7). The QQ designations of the image tiles contained within each folder or zone are shown on the index map for each respective zone (figs. 8–14).

Arizona↗

Riparian groundwater and baseflow studies in the Upper Colorado River Basin

Executive summary As part of an ongoing effort to understand baseflow in the Upper Colorado River Basin (UCRB) and implications for stream-dependent ecosystems, we conducted a brief review of literature related to groundwater and baseflow in the UCRB. We included primary literature, federal and state resources, databases and gray literature studies on groundwater, baseflow, and springs in the UCRB region. This review provides examples of the types of groundwater and baseflow studies published for the UCRB with sections on whole-basin studies, catchment and reach studies and their locations, water quality studies, studies adjacent to the UCRB, state and federal groundwater resources, and finally a discussion of potential further directions. Despite the limited nature of the review, we summarize numerous studies related to groundwater in the UCRB which will be valuable to researchers interested in groundwater and baseflow dynamics in the region.

Arizona, Colorado, New Mexico, Utah, Wyoming↗

Prioritizing US Geological Survey science on salinization and salinity in candidate and selected priority river basins

The US Geological Survey (USGS) is selecting and prioritizing basins, known as Integrated Water Science basins, for monitoring and intensive study. Previous efforts to aid in this selection process include a scientifically defensible and quantitative assessment of basins facing human-caused water resource challenges (Van Metre et al. in Environmental Monitoring and Assessment , 192(7), 458 2020). In the present work, we explore this ranking process based on water quality considerations, specifically salinity and salinization. We selected top candidate basins to study salinity and salinization issues in 18 hydrologic regions that include 163 candidate basins. Our prioritization is based on quantitative assessment of sources of salinity, drivers of change, and receptors that must respond to those sources and drivers. Source terms represented in the prioritization include geology, depth to brackish groundwater, stream conductivity, chloride in precipitation, urban and agricultural land use, application of road salt as a deicer, and irrigation. Drivers represented in prioritization include changes in chemical weathering as a result of changes in rainwater chemistry. Receptors include measures of water stress, measurements of stream ecological health, and socioeconomic factors. In addition, we present research activities for the USGS on salinity and salinization that can be pursued in these basins including assessment of sources, pathways, and loadings; predicting and understanding changes in sources, peaks, and trends; understanding the components of salinity and mobilization of contaminants; understanding the relationship between salinization and changing ecosystems; and developing knowledge on the causes and distribution of groundwater salinity, brackish water resources, and challenges related to desalination.

Enviornmental Monitoring and Assessment↗