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USGS2016

The Bear River's history and diversion: Constraints, unsolved problems, and implications for the Lake Bonneville record: Chapter 2

The shifting course of the Bear River has influenced the hydrologic balance of the Bonneville basin through time, including the magnitude of Lake Bonneville. This was first recognized by G.K. Gilbert and addressed in the early work of Robert Bright, who focused on the southeastern Idaho region of Gem Valley and Oneida Narrows. In this chapter, we summarize and evaluate existing knowledge from this region, present updated and new chronostratigraphic evidence for the Bear River's drainage history, and discuss implications for the Bonneville record as well as future research needs. The Bear River in Plio-Pleistocene time joined the Snake River to the north by following the present-day Portneuf or Blackfoot drainages, with it likely joining the Portneuf River by middle Pleistocene time. An episode of volcanism in the Blackfoot-Gem Valley volcanic field, sparsely dated to ~ 100–50 ka, diverted the Bear River southward from where the Alexander shield volcano obstructed the river's path into Gem Valley. Previous chronostratigraphic and isotopic work on the Main Canyon Formation in southern Gem Valley indicates internal-basin sedimentation during the Quaternary, with a possible brief incursion of the Bear River ~ 140 ka. New evidence confirms that the Bear River's final diversion at 60–50 ka led to its integration into the Bonneville basin by spillover at a paleo-divide above present-day Oneida Narrows. This drove rapid incision before the rise of Lake Bonneville into the canyon and southern Gem Valley. Bear River diversion at 60–50 ka coincides with the end of the Cutler Dam lake cycle, at the onset of marine isotope stage 3. The Bear River subsequently contributed to the rise of Lake Bonneville, the highest pluvial lake known in the basin, culminating in the Bonneville flood. Key research questions include the prior path of the upper Bear River, dating and understanding the complex geologic relations within the Gem Valley-Blackfoot volcanic field, resolving evidence for possible earlier incursions of Bear River water into the Bonneville basin, and interpreting the sedimentology of the Main Canyon Formation.

Book chapter↗

USGS2005

Nutrient contributions to the Santa Barbara Channel, California, from the ephemeral Santa Clara River

The Santa Clara River delivers nutrient rich runoff to the eastern Santa Barbara Channel during brief (???1-3 day) episodic events. Using both river and oceanographic measurements, we evaluate river loading and dispersal of dissolved macronutrients (silicate, inorganic N and P) and comment on the biological implications of these nutrient contributions. Both river and ocean observations suggest that river nutrient concentrations are inversely related to river flow rates. Land use is suggested to influence these concentrations, since runoff from a subwatershed with substantial agriculture and urban areas had much higher nitrate than runoff from a wooded subwatershed. During runoff events, river nutrients were observed to conservatively mix into the buoyant, surface plume immediately seaward of the Santa Clara River mouth. Dispersal of these river nutrients extended 10s of km into the channel. Growth of phytoplankton and nutrient uptake was low during our observations (1-3 days following runoff), presumably due to the very low light levels resulting from high turbidity. However, nutrient quality of runoff (Si:N:P = 16:5:1) was found to be significantly different than upwelling inputs (13:10:1), which may influence different algal responses once sediments settle. Evaluation of total river nitrate loads suggests that most of the annual river nutrient fluxes to the ocean occur during the brief winter flooding events. Wet winters (such as El Nin??o) contribute nutrients at rates approximately an order-of-magnitude greater than "average" winters. Although total river nitrate delivery is considerably less than that supplied by upwelling, the timing and location of these types of events are very different, with river discharge (upwelling) occurring predominantly in the winter (summer) and in the eastern (western) channel. ?? 2004 Elsevier Ltd. All rights reserved.

Estuarine, Coastal and Shelf Science↗

USGS2004

The origin and mechanisms of salinization of the Lower Jordan River

The chemical and isotopic (87Sr/86Sr, ??11B, ??34Ssulfate, ??18Owater, ??15Nnitrate) compositions of water from the Lower Jordan River and its major tributaries between the Sea of Galilee and the Dead Sea were determined in order to reveal the origin of the salinity of the Jordan River. We identified three separate hydrological zones along the flow of the river: (1) A northern section (20 km downstream of its source) where the base flow composed of diverted saline and wastewaters is modified due to discharge of shallow sulfate-rich groundwater, characterized by low 87Sr/86Sr (0.7072), ??34Ssulfate (-2???), high ??11B (???36???), ??15Nnitrate (???15???) and high ??18Owater (-2 to-3???) values. The shallow groundwater is derived from agricultural drainage water mixed with natural saline groundwater and discharges to both the Jordan and Yarmouk rivers. The contribution of the groundwater component in the Jordan River flow, deduced from mixing relationships of solutes and strontium isotopes, varies from 20 to 50% of the total flow. (2) A central zone (20-50 km downstream from its source) where salt variations are minimal and the rise of 87Sr/86Sr and SO4/Cl ratios reflects predominance of eastern surface water flows. (3) A southern section (50-100 km downstream of its source) where the total dissolved solids of the Jordan River increase, particularly during the spring (70-80 km) and summer (80-100 km) to values as high as 11.1 g/L. Variations in the chemical and isotopic compositions of river water along the southern section suggest that the Zarqa River (87Sr/86Sr???0.70865; ??11B???25???) has a negligible affect on the Jordan River. Instead, the river quality is influenced primarily by groundwater discharge composed of sulfate-rich saline groundwater (Cl-=31-180 mM; SO4/Cl???0.2-0.5; Br/Cl???2-3??10-3; 87Sr/86Sr???0.70805; ??11B???30???; ??15Nnitrate ???17???, ??34Ssulfate=4-10???), and Ca-chloride Rift valley brines (Cl-=846-1500 mM; Br/Cl???6-8??10-3; 87Sr/86Sr???0.7080; ??11B???40???; ??34Ssulfate=4-10???). Mixing calculations indicate that the groundwater discharged to the river is composed of varying proportions of brines and sulfate-rich saline groundwater. Solute mass balance calculations point to a ???10% contribution of saline groundwater (Cl-=282 to 564 mM) to the river. A high nitrate level (up to 2.5 mM) in the groundwater suggests that drainage of wastewater derived irrigation water is an important source for the groundwater. This irrigation water appears to leach Pleistocene sediments of the Jordan Valley resulting in elevated sulfate contents and altered strontium and boron isotopic compositions of the groundwater that in turn impacts the water quality of the lower Jordan River. ?? 2004 Elsevier Ltd.

Geochimica et Cosmochimica Acta↗

USGS2017

Coastal river plumes: Collisions and coalescence

Plumes of buoyant river water spread in the ocean from river mouths, and these plumes influence water quality, sediment dispersal, primary productivity, and circulation along the world’s coasts. Most investigations of river plumes have focused on large rivers in a coastal region, for which the physical spreading of the plume is assumed to be independent from the influence of other buoyant plumes. Here we provide new understanding of the spreading patterns of multiple plumes interacting along simplified coastal settings by investigating: (i) the relative likelihood of plume-to-plume interactions at different settings using geophysical scaling, (ii) the diversity of plume frontal collision types and the effects of these collisions on spreading patterns of plume waters using a two-dimensional hydrodynamic model, and (iii) the fundamental differences in plume spreading patterns between coasts with single and multiple rivers using a three-dimensional hydrodynamic model. Geophysical scaling suggests that coastal margins with numerous small rivers (watershed areas < 10,000 km 2 ), such as found along most active geologic coastal margins, were much more likely to have river plumes that collide and interact than coastal settings with large rivers (watershed areas > 100,000 km 2 ). When two plume fronts meet, several types of collision attributes were found, including refection, subduction and occlusion. We found that the relative differences in pre-collision plume densities and thicknesses strongly influenced the resulting collision types. The three-dimensional spreading of buoyant plumes was found to be influenced by the presence of additional rivers for all modeled scenarios, including those with and without Coriolis and wind. Combined, these results suggest that plume-to-plume interactions are common phenomena for coastal regions offshore of the world’s smaller rivers and for coastal settings with multiple river mouths in close proximity, and that the spreading and fate of river waters in these settings will be strongly influenced by these interactions. We conclude that new investigations are needed to characterize how plumes interact offshore of river mouths to better understand the transport and fate of terrestrial sources of pollution, nutrients and other materials in the ocean.

Progress in Oceanography↗

USGS2007

Evidence of lake whitefish spawning in the Detroit River: Implications for habitat and population recovery

Historic reports imply that the lower Detroit River was once a prolific spawning area for lake whitefish ( Coregonus clupeaformis ) prior to the construction of the Livingstone shipping channel in 1911. Large numbers of lake whitefish migrated into the river in fall where they spawned on expansive limestone bedrock and gravel bars. Lake whitefish were harvested in the river during this time by commercial fisheries and for fish culture operations. The last reported landing of lake whitefish from the Detroit River was in 1925. Loss of suitable spawning habitat during the construction of the shipping channels as well as the effects of over-fishing, sea lamprey ( Petromyzon marinus ) predation, loss of riparian wetlands, and other perturbations to riverine habitat are associated with the disappearance of lake whitefish spawning runs. Because lake whitefish are recovering in Lake Erie with substantial spawning occurring in the western basin, we suspected they may once again be using the Detroit River to spawn. We sampled in the Detroit River for lake whitefish adults and eggs in late fall of 2005 and for lake whitefish eggs and fish larvae in 2006 to assess the extent of reproduction in the river. A spawning-ready male lake whitefish was collected in gillnets and several dozen viable lake whitefish eggs were collected with a pump in the Detroit River in November and December 2005. No lake whitefish eggs were found at lower river sites in March of 2006, but viable lake whitefish eggs were found at Belle Isle in the upper river in early April. Several hundred lake whitefish larvae were collected in the river during March through early May 2006. Peak larval densities (30 fish/1,000 m3 of water) were observed during the week of 3 April. Because high numbers of lake whitefish larvae were collected from mid- and downstream sample sites in the river, we believe that production of lake whitefish in the Detroit River may be a substantial contribution to the lake whitefish population in Lake Erie.

Michigan↗

USGS1993

Spawning activity of paddlefish (Polyodon spathula) in the lower Black River, Wisconsin

We present indirect evidence of successful paddlefish ( Polyodon spathula reproduction in 1989 and 1991 in the lower Black River, Wisconsin, about 5 km upstream of the confluence with the upper Mississippi River. This is the first indication of successful reproduction by paddlefish at the northern end of its range in the central United States. Attempts to document paddlefish Polyodon spathula reproduction by sampling eggs and larvae began in the early 1900s (e.g., Stockard 1907), but the exact timing and location of fish spawning were unknown until the early 1960s. Actual spawning by paddlefish was first observed over gravel bars in the Osage River, Missouri, by Purkett (1961), who then collected eggs and larvae. Paddlefish eggs and larvae have since been collected below dams on the Missouri (Ruelle and Hudson 1977, Unkenholz 1982), Cumberland, and Tennessee Rivers (Pasch et al. 1980, Wall us 1986). However, the spawning areas for most paddlefish populations remain unknown. Because larval paddlefish are rarely sampled, the presence of post-larval and juvenile paddlefish is often interpreted as indirect evidence of successful reproduction. Such evidence has been used in Illinois (Adams 1942), Oklahoma (Houser and Bross 1959), the Missouri River along the Nebraska-South Dakota border (Ruelle and Hudson 1977), Pool 13 of the upper Mississippi River (Gengerke 1978), and Louisiana (Reed et al. 1992) to document successful paddlefish reproduction. We gathered similar evidence from the lower Black River, near La Crosse, Wisconsin. This information is important because Wisconsin represents the northern limit for paddlefish in the central United States (Gengerke 1986) and because attempts to document reproduction by the few remaining localized populations in the state have been unsuccessful (Lyons, In press). Additionally, paddlefish are of special concern in Wisconsin because of low numbers and limited distribution (Johnson 1987). During November 1990, we observed a small paddlefish (about 700 mm total length, TL) in the catch of commercial seine fishermen working in the lower Black River (about 5 km upstream from its confluence with the Mississippi River). On April 15, 1992, commercial fishermen working the same section of the Black River found five small paddlefish (<350 mm TL) in their catch. Additionally, three small paddlefish (about 800 mm TL) were taken on December 28, 1992, during commercial seining operations in the lower Black River. In Pool 13 of the upper Mississippi River, age-1 paddlefish averaged 498 mm fork length (Gengerke 1978), and the growth of paddlefish is faster in backwaters than in the main channel (Rosen 1976, Russell 1986). Therefore, we think that the three 800-mm paddlefish taken on December 28, 1992 were age-1 fish that hatched during spring 1991 near the Lake Onalaska spillway on the lower Black River. We also think that the 700-mm paddlefish observed in November 1990 was an age-1 fish that had hatched in the same area during spring 1989.

Journal of Freshwater Ecology↗

USGS2009

Riverine based eco-tourism: Trinity River non-market benefits estimates

California's Central Valley Project (CVP) was approved by voters in a statewide referendum in 1933. CVP referendum approval initiated funding for construction of important water development projects that had far reaching effects on regional water supplies. The construction of Trinity Dam in 1963 and the subsequent transbasin diversion of Trinity River flow was one of several CVP projects that had noteworthy adverse environmental and regional economic impacts. The Trinity River is the largest tributary of the Klamath River, and has its headwaters in the Trinity Alps of north-central California. After the construction of Trinity Dam in 1963, 90% of the Trinity River flow at Lewiston was moved to the Sacramento River via the Clear Creek Tunnel. Before 1963, the Trinity River was a major recreation resource of Northern California. The loss of stream flow has had a marked adverse impact on Trinity River-related recreation activities and the size and robustness of Trinity River salmon, steelhead, shad, and sturgeon runs. Trinity River water produces hydropower during its transit via Bureau of Reclamation canals and pumps to the northern San Joaquin Valley, where it is used for irrigated agriculture. The benefits provided by Trinity River instream flow-related environmental amenities were estimated with the travel cost method (TCM). Trinity River non-market benefits are about $406 million per annum, while the social cost of sending water down the Trinity River ranges from $17 to $42 million per annum, depending on the exact flow. We also discuss the relative magnitude of Trinity River survey data contingent value method (CVM) benefits estimates.

International Journal of Sustainable Development a↗

USGS2006

River-aquifer interactions, geologic heterogeneity, and low-flow management

Low river flows are commonly controlled by river-aquifer exchange, the magnitude of which is governed by hydraulic properties of both aquifer and aquitard materials beneath the river. Low flows are often important ecologically. Numerical simulations were used to assess how textural heterogeneity of an alluvial system influences river seepage and low flows. The Cosumnes River in California was used as a test case. Declining fall flows in the Cosumnes River have threatened Chinook salmon runs. A ground water-surface water model for the lower river basin was developed, which incorporates detailed geostatistical simulations of aquifer heterogeneity. Six different realizations of heterogeneity and a homogenous model were run for a 3-year period. Net annual seepage from the river was found to be similar among the models. However, spatial distribution of seepage along the channel, water table configuration and the level of local connection, and disconnection between the river and aquifer showed strong variations among the different heterogeneous models. Most importantly, the heterogeneous models suggest that river seepage losses can be reduced by local reconnections, even when the regional water table remains well below the riverbed. The percentage of river channel responsible for 50% of total river seepage ranged from 10% to 26% in the heterogeneous models as opposed to 23% in the homogeneous model. Differences in seepage between the models resulted in up to 13 d difference in the number of days the river was open for salmon migration during the critical fall months in one given year. Copyright ?? 2006 The Author(s).

Conference Paper↗

USGS2007

Transport of diazinon in the San Joaquin River Basin, California

ABSTRACT: Most of the application of the organophosphate insecticide diazinon in the San Joaquin River Basin occurs in winter to control wood-boring insects in dormant almond orchards. A federalstate collaborative study found that diazinon accounted for most of the observed toxicity of San Joaquin River water in February 1993. Previous studies focused mainly on west-side inputs to the San Joaquin River. In this 1994 study, the three major east-side tributaries to the San Joaquin River - the Merced, Tuolumne, and Stanislaus rivers - and a downstream site on the San Joaquin River were sampled throughout the hydrographs of a late January and an early February storm. In both storms, the Tuolumne River had the highest concentrations of diazinon and transported the largest load of the three tributaries. The Stanislaus River was a small source in both storms. On the basis of previous storm sampling and estimated travel times, ephemeral west-side creeks probably were the main diazinon source early in the storms, whereas the Tuolumne and Merced rivers and east-side drainages directly to the San Joaquin River were the main sources later. Although 74 percent of diazinon transport in the San Joaquin River during 1991–1993 occurred in January and February, transport during each of the two 1994 storms was only 0.05 percent of the amount applied during preceding dry periods. Nevertheless, some of the diazinon concentrations in the San Joaquin River during the January storm exceeded 0.35 μ/L, a concentration shown to be acutely toxic to water fleas. On the basis of this study and previous studies, diazinon concentrations and streamflow are highly variable during January and February storms, and frequent sampling is required to evaluate transport in the San Joaquin River Basin.

Journal of the American Water Resources Associatio↗

USGS1986

Downstream effects of Flaming Gorge Reservoir on the Green River, Colorado and Utah

The Green River is one of the principal tributaries in the Colorado River basin and drains 44,700 m 2 in Wyoming, Colorado, and Utah. Since October 1962, flows of the Green River have been regulated by Flaming Gorge Reservoir, which is located 412 river miles upstream from its confluence with the Colorado River. Mean annual runoff has not been affected by the reservoir. The duration of the relatively large discharges that transport most of the annual sediment load, however, has decreased significantly. As a result, the mean annual sediment discharge has decreased by 54% to 3.21 × 10 6 tons from 6.92 × 10 6 tons at the Jensen gage located 105 river miles downstream from the reservoir and by 48% to 8.83 × 10 6 tons from 17.0 × 10 6 tons at the Green River, Utah, gage located 290 river miles downstream from the reservoir. Sediment supply to I he channel equals the annual transport within a relatively short distance, 68 river miles, downstream from the reservoir. Downstream from river mile 166, the supply of sediment from upstream plus tributary inflow exceeds the transport of sediment by ∼5.4 × 10 6 tons per year on an average. The quasi-equilibrium that appears to have existed prior to the reservoir no longer occurs along a majority of the Green River. In response to the reduced peak discharges, the bankfull channel width of the Green River has decreased by ∼10%. Adjustment of the channel to decreased peak flows and altered sediment loads is nowhere complete. At present, it appears that a century or more will be required for the Green River to adjust to the effects of Flaming Gorge Reservoir.

Colorado, Utah↗

USGS2009

Geology and geomorphology of Bear Lake Valley and upper Bear River, Utah and Idaho

Bear Lake, on the Idaho-Utah border, lies in a fault-bounded valley through which the Bear River flows en route to the Great Salt Lake. Surficial deposits in the Bear Lake drainage basin provide a geologic context for interpretation of cores from Bear Lake deposits. In addition to groundwater discharge, Bear Lake received water and sediment from its own small drainage basin and sometimes from the Bear River and its glaciated headwaters. The lake basin interacts with the river in complex ways that are modulated by climatically induced lake-level changes, by the distribution of active Quaternary faults, and by the migration of the river across its fluvial fan north of the present lake. The upper Bear River flows northward for ???150 km from its headwaters in the northwestern Uinta Mountains, generally following the strike of regional Laramide and late Cenozoic structures. These structures likely also control the flow paths of groundwater that feeds Bear Lake, and groundwater-fed streams are the largest source of water when the lake is isolated from the Bear River. The present configuration of the Bear River with respect to Bear Lake Valley may not have been established until the late Pliocene. The absence of Uinta Range-derived quartzites in fluvial gravel on the crest of the Bear Lake Plateau east of Bear Lake suggests that the present headwaters were not part of the drainage basin in the late Tertiary. Newly mapped glacial deposits in the Bear River Range west of Bear Lake indicate several advances of valley glaciers that were probably coeval with glaciations in the Uinta Mountains. Much of the meltwater from these glaciers may have reached Bear Lake via groundwater pathways through infiltration in the karst terrain of the Bear River Range. At times during the Pleistocene, the Bear River flowed into Bear Lake and water level rose to the valley threshold at Nounan narrows. This threshold has been modified by aggradation, downcutting, and tectonics. Maximum lake levels have decreased from as high as 1830 m to 1806 m above sea level since the early Pleistocene due to episodic downcutting by the Bear River. The oldest exposed lacustrine sediments in Bear Lake Valley are probably of Pliocene age. Several high-lake phases during the early and middle Pleistocene were separated by episodes of fluvial incision. Threshold incision was not constant, however, because lake highstands of as much as 8 m above bedrock threshold level resulted from aggradation and possibly landsliding at least twice during the late-middle and late Pleistocene. Abandoned stream channels within the low-lying, fault-bounded region between Bear Lake and the modern Bear River show that Bear River progressively shifted northward during the Holocene. Several factors including faulting, location of the fluvial fan, and channel migration across the fluvial fan probably interacted to produce these changes in channel position. Late Quaternary slip rates on the east Bear Lake fault zone are estimated by using the water-level history of Bear Lake, assuming little or no displacement on dated deposits on the west side of the valley. Uplifted lacustrine deposits representing Pliocene to middle Pleistocene highstands of Bear Lake on the footwall block of the east Bear Lake fault zone provide dramatic evidence of long-term slip. Slip rates during the late Pleistocene increased from north to south along the east Bear Lake fault zone, consistent with the tectonic geomorphology. In addition, slip rates on the southern section of the fault zone have apparently decreased over the past 50 k.y. Copyright ?? 2009 The Geological Society of America.

Special Paper of the Geological Society of America↗

USGS2004

Ichthyophoniasis: An emerging disease of Chinook salmon in the Yukon River

Before 1985, Ichthyophonus was unreported among Pacific salmon Oncorhynchus spp. from the Yukon River; now it infects more than 40% of returning adult Chinook salmon O. tshawytscha . Overall infection prevalence reached about 45% in the Yukon River and about 30% in the Tanana River between 1999 and 2003. Mean infection prevalence was greater in females than males in the main-stem Yukon River during each of the 5 years of the study, but the infection prevalence in males increased each year until the difference was no longer significant. Clinical signs of ichthyophoniasis (presence of visible punctate white lesions in internal organs) were least at the mouth of the Yukon River (&sim;10%) but increased to 29% when fish reached the middle Yukon River and was 22% at the upper Tanana River. However, clinical signs increased each year from 7% in 1999 to 27% in 2003 at the mouth of the river. As fish approached the upper reaches of the Yukon River (Canada) and the spawning areas of the Chena and Salcha rivers (Alaska), infection prevalence dropped significantly to less than 15% in females on the Yukon River and less than 10% for both sexes in the Chena and Salcha rivers, presumably because of mortality among infected prespawn fish. Age was not a factor in infection prevalence, nor was the position of fish within the run. The source of infection was not determined, but Ichthyophonus was not found in 400 Pacific herring Clupea pallasi from the Bering Sea or in 120 outmigrating juvenile Chinook salmon from two drainages in Alaska and Canada. Freshwater burbot Lota lota from the middle Yukon River were subclinically infected with Ichthyophonus , but the origin and relationship of this agent to the Chinook salmon isolate is unknown.

Yukon River↗

USGS2010

Discovery of ammocrypta clara (western sand darter) in the Upper Ohio River of West Virginia

Ammocrypta clara Jordan and Meek (western sand darter) occurs primarily in the western portions of Mississippi River system, but also has been reported from a Lake Michigan drainage and a few eastern Texas Gulf Slope rivers. Additional range records depict a semi-disjunct distribution within the Ohio River drainage, including collections from Wabash River in Indiana, the Cumberland, Green, Kentucky and Big Sandy rivers of Kentucky, and the upper Tennessee River in Tennessee and Virginia. This paper documents the occurrence of A. clara from the upper Ohio River drainage within the lower Elk River, West Virginia, based on collections from 1986, 1991, 1995, 2005 and 2006. The Elk River population, consistent with those of other Ohio River drainages, has slightly higher counts for numbers of dorsal-fin rays, scales below lateral line and lateral line scales when compared to data from populations outside of the Ohio River drainage. Modal counts of meristic characters are similar among populations, except for higher modal counts of lateral line scales in the Ohio River population. The discovery of the Elk River population extends the range distribution of A. clara in the Eastern Highlands region, documents wide distributional overlap and additional sympatry with its sister species, A. pellucida (eastern sand darter), and softens support for an east-west Central Highlands vicariance hypothesis for the present distribution of A. clara and A. pellucida .

West Virginia↗

USGS2010

An overview of historical channel adjustment and selected hydraulic values in the Lower Sabine and Lower Brazos River Basins, Texas and Louisiana

The Sabine and Brazos are alluvial rivers; alluvial rivers are dynamic systems that adjust their geometry in response to changes in streamflow (discharge) and sediment load. In fluvial geomorphology, the term 'channel adjustment' refers to river channel changes in three geometric dimensions: (1) channel slope (profile); (2) the outline or shape, such as meandering or braided, projected on a horizontal plane (planform); and (3) cross-sectional form (shape). The primary objective of the study was to investigate how the channel morphology of these rivers has changed in response to reservoirs and other anthropogenic disturbances that have altered streamflow and sediment load. The results of this study are expected to aid ecological assessments in the lower Sabine River and lower Brazos River Basins for the Texas Instream Flow Program. Starting in the 1920s, several dams have been constructed on the Sabine and Brazos Rivers and their tributaries, and numerous bridges have been built and sometimes replaced multiple times, which have changed the natural flow regime and reduced or altered sediment loads downstream. Changes in channel geometry over time can reduce channel conveyance and thus streamflow, which can have adverse ecological effects. Channel attributes including cross-section form, channel slope, and planform change were evaluated to learn how each river's morphology changed over many years in response to natural and anthropogenic disturbances. Climate has large influence on the hydrologic regimes of the lower Sabine and lower Brazos River Basins. Equally important as climate in controlling the hydrologic regime of the two river systems are numerous reservoirs that regulate downstream flow releases. The hydrologic regimes of the two rivers and their tributaries reflect the combined influences of climate, flow regulation, and drainage area. Historical and contemporary cross-sectional channel geometries at 15 streamflow-gaging stations in the lower Sabine and lower Brazos River Basins were evaluated. An in-depth discussion of results from streamflow-gaging station 08028500 Sabine River near Bon Weir, Tex., is featured here as an example of the analyses that were done at each station.

Fact Sheet↗

USGS2012

An environmental streamflow assessment for the Santiam River basin, Oregon

The Santiam River is a tributary of the Willamette River in northwestern Oregon and drains an area of 1,810 square miles. The U.S. Army Corps of Engineers (USACE) operates four dams in the basin, which are used primarily for flood control, hydropower production, recreation, and water-quality improvement. The Detroit and Big Cliff Dams were constructed in 1953 on the North Santiam River. The Green Peter and Foster Dams were completed in 1967 on the South Santiam River. The impacts of the structures have included a decrease in the frequency and magnitude of floods and an increase in low flows. For three North Santiam River reaches, the median of annual 1-day maximum streamflows decreased 42–50 percent because of regulated streamflow conditions. Likewise, for three reaches in the South Santiam River basin, the median of annual 1-day maximum streamflows decreased 39–52 percent because of regulation. In contrast to their effect on high flows, the dams increased low flows. The median of annual 7-day minimum flows in six of the seven study reaches increased under regulated streamflow conditions between 60 and 334 percent. On a seasonal basis, median monthly streamflows decreased from February to May and increased from September to January in all the reaches. However, the magnitude of these impacts usually decreased farther downstream from dams because of cumulative inflow from unregulated tributaries and groundwater entering the North, South, and main-stem Santiam Rivers below the dams. A Wilcox rank-sum test of monthly precipitation data from Salem, Oregon, and Waterloo, Oregon, found no significant difference between the pre-and post-dam periods, which suggests that the construction and operation of the dams since the 1950s and 1960s are a primary cause of alterations to the Santiam River basin streamflow regime. In addition to the streamflow analysis, this report provides a geomorphic characterization of the Santiam River basin and the associated conceptual framework for assessing possible geomorphic and ecological changes in response to river-flow modifications. Suggestions for future biomonitoring and investigations are also provided. This study was one in a series of similar tributary streamflow and geomorphic studies conducted for the Willamette Sustainable Rivers Project. The Sustainable Rivers Project is a national effort by the USACE and The Nature Conservancy to develop environmental flow requirements in regulated river systems.

Oregon↗

USGS2013

Accuracy of the Missouri River Least Tern and Piping Plover Monitoring Program: considerations for the future

The upper Missouri River system provides nesting and foraging habitat for federally endangered least terns (Sternula antillarum; hereafter “terns”) and threatened piping plovers (Charadrius melodus; hereafter “plovers”). These species are the subject of substantial management interest on the Missouri River for several reasons. First, ecosystem recovery is a goal for management agencies that seek to maintain or restore natural functions and native biological communities for the Missouri River system. Terns and plovers are recognized as important ecosystem components that are linked with the river’s ecological functions. Second, although both species breed beyond the Missouri River system, the Missouri River is one of the principal breeding areas in the Northern Great Plains; thus, the river system is a focal area for recovery actions targeted at regional population goals. Third, a Biological Opinion for Missouri River operations established annual productivity goals for terns and plovers, and the recovery plan for each species established annual population goals. Meeting these goals is a key motivation in management decision making and implementation with regard to both species. A myriad of conservation and management interests necessitate understanding numbers, distribution, and productivity of terns and plovers on the Missouri River system. To this end, a Tern and Plover Monitoring Program (TPMP) was implemented by the U.S. Army Corps of Engineers (hereafter “Corps”) in 1986, and has since provided annual estimates of tern and plover numbers and productivity for five Missouri River reservoirs and four river reaches (U.S. Army Corps of Engineers, 1993). The TPMP has served as the primary source of information about the status of terns and plovers on the Missouri River, and TPMP data have been used for a wide variety of purposes. In 2005, the U.S. Geological Survey (USGS) Northern Prairie Wildlife Research Center (NPWRC) was tasked by the Corps to evaluate the accuracy of the TPMP and provide guidance on revising the program to assess tern and plover numbers and reproductive success. Accordingly, NPWRC studied terns and plovers on two river reaches and one reservoir (hereafter “the evaluation”), and used the results of those studies to help understand properties and potential limitations of TPMP data and to provide guidance for TPMP revisions. The purpose of this report is to present an overview and evaluation of the TPMP data, the results of our intensive monitoring, and propose an alternative idea that provides a framework for making decisions about how to monitor terns and plovers.

Montana;Nebraska;North Dakota;South Dakota↗

USGS2016

Construction, calibration, and validation of the RBM10 water temperature model for the Trinity River, northern California

We constructed a one-dimensional daily averaged water-temperature model to simulate Trinity River temperatures for 1980–2013. The purpose of this model is to assess effects of water-management actions on water temperature and to provide water temperature inputs for a salmon population dynamics model. Simulated meteorological data, observed streamflow data, and observed water temperatures were used as model inputs to simulate a continuous 34-year time series of historical daily mean water temperature at eight locations along 112.2 river miles from Lewiston Dam near Weaverville, California, downstream to the Klamath River confluence. To demonstrate the utility of the model to inform management actions, we simulated three management alternatives to assess the effects of bypass flow augmentation in a drought year, 1994, and compared those results to the simulated historical baseline, referred to as the “No Action” alternative scenario. Augmentation flows from the Lewiston Dam bypass consist of temperature-controlled releases capable of cooling downstream water temperatures in hot times of the year, which can reduce the probability of disease outbreaks in fish populations. Outputs from the Trinity River water-temperature model were then used as inputs to an existing water-temperature model of the Klamath River to evaluate the effect of augmentation flow releases on water temperatures in the lower Klamath River. We structured the Trinity River water-temperature model in River Basin Model-10 (RBM10), which uses a simple equilibrium flow model, assuming discharge in each river segment on each day is transmitted downstream instantaneously. The model uses a heat-budget formulation to quantify heat flux at the air-water interface. Inputs for the heat budget are calculated from daily mean meteorological data, including net shortwave solar radiation, net longwave atmospheric radiation, air temperature, wind speed, vapor pressure, and a psychrometric constant needed to calculate the Bowen ratio. The modeling domain was divided into eight reaches ranging in length from 8.8 to 20.6 miles, which were calibrated and validated separately with observed water temperature data collected irregularly from 1980 to 2013. Root mean square errors of observed and simulated water temperatures for the eight reaches ranged from 0.25 to 1.12 degrees Celsius (°C). Mean absolute errors ranged from 0.18 to 0.89 °C. For model validation, a k -fold cross-validation technique was used. Validation root mean square error and mean absolute error for the eight reaches ranged from 0.24 to 1.11 °C and from 0.18 to 0.89 °C, respectively. Augmentation scenarios were based on historical hydrological and meteorological data, combined with prescribed flow and temperature releases from Lewiston Dam provided by the Bureau of Reclamation. Water releases were scheduled to achieve targeted flows of 2,500, 2,800, and 3,200 cubic feet per second in the lower Klamath River from mid-August through late September, coinciding with the upstream migration of adult fall-run Chinook salmon ( Oncorhynchus tshawytscha ). Water temperatures simulated at river mile 5.7 on the Klamath River showed a 5 °C decrease from the No Action historical baseline, which was near or greater than 23 °C when augmentation began in mid-August. Thereafter, an approximate 1 °C difference among augmentation scenarios emerged, with the decrease in water temperature commensurate to the level of augmentation. All augmentation scenarios simulated water temperatures equal to or less than 21 °C from mid-August through late September. Water temperatures equal to or greater than 23 °C are of particular interest because of a thermal threshold known to inhibit upstream migration of salmon. When temperatures exceed this approximate 23 °C threshold, Chinook salmon are known to congregate in high densities in thermal refugias and show extended residence times, which can potentially trigger epizootic outbreaks such as of Ichthyophthirius multifiliis (“Ich”) and Flavobacterium columnare (“Columnaris”) that were the causative factors of the Klamath River fish kill in 2002. A model with the ability to simulate water temperatures in response to management actions at the basin scale is a valuable asset for water managers who must make decisions about how best to use limited water resources, which directly affect the state of fisheries in the Klamath Basin.

California↗

USGS2023

Groundwater quality in the Mohawk and western New York River Basins, New York, 2016

Water samples were collected from July through December 2016 from 9 production wells and 13 domestic wells in the Mohawk River Basin, and from 17 production wells and 17 domestic wells in the western New York River Basins. The samples were collected and processed by using standard U.S. Geological Survey methods and were analyzed for 320 physicochemical properties and constituents, including dissolved gases, major ions, nutrients, trace elements, pesticides, volatile organic compounds, radionuclides, and indicator bacteria, to characterize groundwater quality in the basins. Analytical results are provided in the companion U.S. Geological Survey data release titled “Groundwater Quality Data From the Mohawk and Western New York River Basins, New York, 2016.” The Mohawk River Basin study area covers 3,500 square miles in New York. Of the 22 wells sampled in the Mohawk River Basin, 8 are completed in sand and gravel, and 14 are completed in bedrock aquifers. Most constituents in the samples from the Mohawk River Basin were present in concentrations below the maximum contaminant levels used in public supply drinking-water regulations by the New York State Department of Health and the U.S. Environmental Protection Agency. Values for some of the properties and concentrations of some constituents—pH, color, iron, manganese, aluminum, sodium, chloride, dissolved solids, radon-222, and heterotrophic plate count—sometimes equaled or exceeded primary, secondary, or proposed drinking-water standards. The western New York River Basins study area covers 5,340 square miles in western New York and includes parts of the Lake Erie and Niagara River Basins, the western Lake Ontario Basin (between the Niagara River and Genesee River Basins), and the Allegheny River Basin. Of the 34 wells sampled in the western New York River Basins, 16 are completed in sand and gravel, and 18 are completed in bedrock aquifers. Most constituents in the samples from the western New York River Basins were present in concentrations below the maximum contaminant levels used in public supply drinking-water regulations by the New York State Department of Health and the U.S. Environmental Protection Agency. Values for some of the properties and concentrations of some constituents—color, chloride, sodium, dissolved solids, iron, manganese, aluminum, arsenic, barium, radon-222, methane, total coliform bacteria, fecal coliform bacteria, and Escherichia coli bacteria—sometimes equaled or exceeded primary, secondary, or proposed drinking-water standards.

New York↗