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USGS2020

Soil moisture product validation good practices protocol, version 1.0

The Global Climate Observing System (GCOS) included soil moisture in the list of Essential Climate Variables (ECVs) to express its important role in Earth’s water, energy and carbon cycle. Soil moisture has a major impact on agriculture, land surface hydrology, weather, and climate forecasting. This document is a community-based effort to provide recommendations on good practices for the validation of global to regional soil moisture products. Definitions are given and metrics to adequately describe the quality of soil moisture products are presented. Spaceborne active and passive microwave sensors are listed with their characteristics, and the typical soil moisture retrieval methods are explained, including dielectric mixing models and optical methods. Spatial scaling, root zone soil moisture estimation, and operational implementations are addressed, as these issues continue to gain more and more importance. Standard and advanced in situ measurement techniques are described as well as sensor calibration, spatial representativity, sampling strategies, and the benefit of airborne campaigns.The community has agreed upon the utilization of the International Soil Moisture Network (ISMN) as the main online repository for in situ soil moisture measurements. Different validation methods such as ground-based validation, satellite product intercomparison, and time series analyses are presented. We provide strategies to evaluate the long-term quality of soil moisture products, and give advice on how to handle typical temporal and spatial-scale mismatches and how to effectively report validation results. Moreover, the benefit of blind tests is discussed to gain objective validation results. We encourage data providers, scientists and practitioners to use this Soil Moisture Product Validation Good Practices Protocol to provide, analyze, and improve high quality Earth Observation results.

Report↗

USGS2006

A Spatial Overlay Ranking Method for a Geospatial Search of Text Objects

Earth-science researchers need the capability to find relevant information by location and topic. Conventional geographic techniques that simply check whether polygons intersect can efficiently achieve a high recall on location, but can not achieve precision for ranking results in likely order of importance to the reader. A spatial overlay ranking based upon how well an object's footprint matches the search area provides a more effective way to spatially search a collection of reports, and avoids many of the problems associated with an 'in/out' (True/False) boolean search. Moreover, spatial overlay ranking appears to work well even when spatial extent is defined only by a simple bounding box.

Open-File Report↗

USGS2011

Evaluating trapping techniques to reduce potential for injury to Mexican wolves

Increased scrutiny of furbearer trapping has resulted in more regulation and even prohibition of common trapping methods in some States. Concerns regarding the potential negative impacts of regulated furbearer trapping on reintroduced Mexican gray wolves (Canis lupus baileyi) led now former Governor Bill Richardson to issue an executive order prohibiting trapping in the New Mexico portion of the Blue Range Wolf Recovery Area (BRWRA). This ban was to last for at least 6 months and required an evaluation of the risk posed to wolves by traps and snares legally permitted in New Mexico. We reviewed various threats to wolves in the BRWRA, including threats posed by regulated furbearer trapping. Seventy-eight Mexican wolf mortalities were documented during the reintroduction effort (1998-2010). More than 80 percent of documented mortalities were human-caused: illegal shooting (47.4 percent), vehicle collisions (15.4 percent), lethal removal by the U.S. Fish and Wildlife Service (USFWS) (14.1 percent), nonproject-related trapping (2.6 percent), project-related trapping (1.3 percent), and legal shooting by the public (1.3 percent). The remaining 17.9 percent of mortalities were a result of natural causes. An additional 23 wolves were permanently removed from the wild by USFWS. Of 13 trapping incidents in New Mexico that involved trappers other than USFWS project personnel, 7 incidents resulted in injuries to wolves, 2 wolves sustained injuries severe enough to result in leg amputations, and 2 wolves died as a result of injuries sustained. Rubber-padded foothold traps and properly set snares would most likely reduce trap-related injuries to Mexican wolves; however, impacts caused by trapping are outnumbered by other, human-caused impacts.

New Mexico;Arizona↗

USGS2017

Walleye age estimation using otoliths and dorsal spines: Preparation techniques and sampling guidelines based on sex and total length

We used dorsal spines and otoliths from 735 Walleye Sander vitreus collected from 35 Wisconsin water bodies to evaluate whether 1) otolith and dorsal spine cross sections provided age estimates similar to simpler methods of preparation (e.g., whole otoliths and dorsal spines, cracked otoliths); and 2) between-reader precision and differences between spine and otolith ages varied in relation to total length (TL), sex, and growth rate. Ages estimated from structures prepared using simpler techniques were generally similar to ages estimated using thin sections of dorsal spines and otoliths, suggesting that, in some instances, much of the additional processing time and specialized equipment associated with thin sectioning could be avoided. Overall, between-reader precision was higher for sectioned otoliths (mean coefficient of variation [CV] = 3.28%; standard error [SE] = 0.33%) than for sectioned dorsal spines (mean CV = 9.20%; SE = 0.56%). When using sectioned otoliths for age assignment, between-reader precision did not vary between sexes or growth categories (i.e., fast, moderate, slow), but between-reader precision was higher for females than males when using sectioned dorsal spines. Dorsal spines were generally effective at replicating otolith ages for male Walleye <450 mm TL and female Walleye <600 mm TL, suggesting that dorsal spines can be used to estimate ages for male Walleye <450 mm TL and female Walleye <600 mm TL. If sex is unknown, we suggest dorsal spines be used to estimate ages for Walleye <450 mm TL, but that otoliths be used for fish >450 mm TL. Our results provide useful guidance on structure and preparation technique selection for Walleye age estimation, thereby allowing biologists to develop sampling guidelines that could be implemented using information that is always (TL) or often (sex) available at the time of fish collection.

Wisconsin↗

USGS2011

Detection probability in aerial surveys of feral horses

Observation bias pervades data collected during aerial surveys of large animals, and although some sources can be mitigated with informed planning, others must be addressed using valid sampling techniques that carefully model detection probability. Nonetheless, aerial surveys are frequently employed to count large mammals without applying such methods to account for heterogeneity in visibility of animal groups on the landscape. This often leaves managers and interest groups at odds over decisions that are not adequately informed. I analyzed detection of feral horse (Equus caballus) groups by dual independent observers from 24 fixed-wing and 16 helicopter flights using mixed-effect logistic regression models to investigate potential sources of observation bias. I accounted for observer skill, population location, and aircraft type in the model structure and analyzed the effects of group size, sun effect (position related to observer), vegetation type, topography, cloud cover, percent snow cover, and observer fatigue on detection of horse groups. The most important model-averaged effects for both fixed-wing and helicopter surveys included group size (fixed-wing: odds ratio = 0.891, 95% CI = 0.850–0.935; helicopter: odds ratio = 0.640, 95% CI = 0.587–0.698) and sun effect (fixed-wing: odds ratio = 0.632, 95% CI = 0.350–1.141; helicopter: odds ratio = 0.194, 95% CI = 0.080–0.470). Observer fatigue was also an important effect in the best model for helicopter surveys, with detection probability declining after 3 hr of survey time (odds ratio = 0.278, 95% CI = 0.144–0.537). Biases arising from sun effect and observer fatigue can be mitigated by pre-flight survey design. Other sources of bias, such as those arising from group size, topography, and vegetation can only be addressed by employing valid sampling techniques such as double sampling, mark–resight (batch-marked animals), mark–recapture (uniquely marked and identifiable animals), sightability bias correction models, and line transect distance sampling; however, some of these techniques may still only partially correct for negative observation biases.

Journal of Wildlife Management↗

USGS1998

Lake bed classification using acoustic data

As part of our effort to identify the lake bed surficial substrates using remote sensing data, this work designs pattern classifiers by multivariate statistical methods. Probability distribution of the preprocessed acoustic signal is analyzed first. A confidence region approach is then adopted to improve the design of the existing classifier. A technique for further isolation is proposed which minimizes the expected loss from misclassification. The devices constructed are applicable for real-time lake bed categorization. A mimimax approach is suggested to treat more general cases where the a priori probability distribution of the substrate types is unknown. Comparison of the suggested methods with the traditional likelihood ratio tests is discussed.

Applied Mathematics and Computer Science↗

USGS2024

Wildlife health capacity enhancement in Thailand through the World Organisation for Animal Health Twinning Program

There is an increasing need for robust wildlife health programs that provide surveillance and management for diseases in wildlife and wild aquatic populations to manage associated risks. This paper illustrates the value of a systematic method to enhancing wildlife health programs. The U.S. Geological Survey and Mahidol University, Faculty of Veterinary Science, Thailand National Wildlife Health Center formally twinned under the auspices of the World Organisation for Animal Health to enhance wildlife health capacity in Thailand and the Southeast Asia Region. We used a system-wide approach to holistically and interdependently enhance capacity. The project commenced with a wildlife health program needs assessment, and capacity enhancement focused on strengthening the general wildlife health surveillance network and improving wildlife health information management. Activities included partner surveys, interactive and didactic workshops, and individual personnel training. Topics included development of wildlife health information management systems, analysis of the current surveillance network, development of a Theory of Change for a strengthened surveillance network, planning workshops to create a wildlife health network, training on wildlife disease outbreak investigation and field sample collection, leading networks, and individual training on bioinformatics and laboratory techniques. Engagement of stakeholders at all levels, continuous communication throughout the project, use of both strategic planning tools and pedagogical methods, and using iterative and adaptive approaches, were key factors to the success of this project.

Frontiers in Veterinary Science↗

USGS1980

Storm runoff as related to urbanization in the Portland, Oregon-Vancouver, Washington Area

A series of equations was developed to provide a better method of determining flood frequencies in the Portland-Vancouver urban area than is now available. The resulting regression equations can be used to compute peak discharge and storm runoff with a standard error of estimate of approximately 30 percent. Basins used to define the regression equations ranged in size from 0.2 to 26 square miles. Those physical basin parameters that proved to be significant are: drainage area, effective impervious area, storage, rainfall intensity, basin slope, and soil infiltration. The equations indicate that total urbanization of an undeveloped basin can increase peak discharge as much as 3? times and almost double the volume of storm runoff. Impervious area, as delineated by mapping techniques, proved to be an inadequate physical parameter for use in the regression equations because builders and planners have devised many methods of routing storm runoff from impervious areas to the main channel (in effect, speeding up or slowing down the response to the storm). In some parts of the study area, storm runoff was diverted into dry wells and never entered the main channel. To define the effect of this rerouting, the digital model was used to find an effective impervious area that would 'best fit' the rainfall-runoff data. Field estimates to verify the effectiveness of the impervious area for two of the basins showed that optimizations were within 20 percent of those shown by the digital model. Users of these data who may find the effective impervious area a difficult, expensive, and time-consuming parameter to obtain have an alternative. The combination of land-use type I (parks, forests, and vacant lots) and Type II (agriculture) proved to be an excellent inverse indicator of impervious area. Land-use types I and II, coupled with the street-gutter density, an indication of effective routing, provide the user with alternative indices of urbanization.

Oregon, Washington↗

USGS1975

Heavy mineral prospecting in Pakistan

Heavy-mineral prospecting is a method of tracing potential ore minerals to their source by systematically examining the heavy minerals of stream sands. The heavy minerals are partially concentrated in the field by panning. In the laboratory the heavy minerals are further concentrated by floating off the quartz and feldspar in a heavy liquid, such as bromoform, having a specific gravity of 2.89. Magnetite is separated magnetically and scheelite is identified under short-wave ultraviolet light. To obtain quantitative results on the minerals present, the sample is reduced by coning and quartering, mounted on a slide in oil, and a count of a minimum of 250 grains made. The chi square test applied to the splitting and counting techniques shows them to be statistically valid. The properties of some heavy minerals most useful for their rapid identification are listed. Methods here described are those utilizing a minimum of field and laboratory equipment and may be appropriate for application in many areas of the world.

Open-File Report↗

USGS2016

Betrayal: radio-tagged Burmese pythons reveal locations of conspecifics in Everglades National Park

The “Judas” technique is based on the idea that a radio-tagged individual can be used to “betray” conspecifics during the course of its routine social behavior. The Burmese python ( Python bivittatus ) is an invasive constrictor in southern Florida, and few methods are available for its control. Pythons are normally solitary, but from December–April in southern Florida, they form breeding aggregations containing up to 8 individuals, providing an opportunity to apply the technique. We radio-tracked 25 individual adult pythons of both sexes during the breeding season from 2007–2012. Our goals were to (1) characterize python movements and determine habitat selection for betrayal events, (2) quantify betrayal rates of Judas pythons, and (3) compare the efficacy of this tool with current tools for capturing pythons, both in terms of cost per python removed (CPP) and catch per unit effort (CPUE). In a total of 33 python-seasons, we had 8 betrayal events (24 %) in which a Judas python led us to new pythons. Betrayal events occurred more frequently in lowland forest (including tree islands) than would be expected by chance alone. These 8 events resulted in the capture of 14 new individuals (1–4 new pythons per event). Our effort comparison shows that while the Judas technique is more costly than road cruising surveys per python removed, the Judas technique yields more large, reproductive females and is effective at a time of year that road cruising is not, making it a potential complement to the status quo removal effort.

Florida↗

USGS2025

Applications of unoccupied aerial systems (UAS) in landscape ecology: A review of recent research, challenges and emerging opportunities

Context Unoccupied aerial systems/vehicles (UAS/UAV, a.k.a. drones) have become an increasingly popular tool for ecological research. But much of the recent research is concerned with developing mapping and detection approaches, with few studies attempting to link UAS data to ecosystem processes and function. Landscape ecologists have long used high resolution imagery and spatial analyses to address ecological questions and are therefore uniquely positioned to advance UAS research for ecological applications. Objectives The review objectives are to: (1) provide background on how UAS are used in landscape ecological studies, (2) identify major advancements and research gaps, and (3) discuss ways to better facilitate the use of UAS in landscape ecology research. Methods We conducted a systematic review based on PRISMA guidelines using key search terms that are unique to landscape ecology research. We reviewed only papers that applied UAS data to investigate questions about ecological patterns, processes, or function. Results We summarize metadata from 161 papers that fit our review criteria. We highlight and discuss major research themes and applications, sensors and data collection techniques, image processing, feature extraction and spatial analysis, image fusion and satellite scaling, and open data and software. Conclusion We observed a diversity of UAS methods, applications, and creative spatial modeling and analysis approaches. Key aspects of UAS research in landscape ecology include modeling wildlife micro-habitats, scaling of ecosystem functions, landscape and geomorphic change detection, integrating UAS with historical aerial and satellite imagery, and novel applications of spatial statistics.

Landscape Ecology↗

USGS1949

Rodent-repellent studies. III. Advanced studies in the evaluation of chemical repellents

In order to bridge the gap between preliminary screening of chemicals for potential rodent repellency and the application of these compounds to paper cartons, more advanced studies in the evaluation of promising materials have been carried out. These studies have resulted in: (1) a modification of the food acceptance technique which eliminates doubtful compounds and also provides a closer analogy to the ultimate goal, and (2) a method for rapidly testing chemicals incorporated in paper. When the results of these latter tests are expressed as a function of time, it can be shown that a distinct correlation exists between the deterrency exhibited by treated paper and the repellency of treated food.

Journal of the American Pharmaceutical Association↗

USGS2011

Trap style influences wild pig behavior and trapping success

Despite the efforts of many natural resource professionals, wild pig ( Sus scrofa ) populations are expanding in many areas of the world. Although many creative techniques for controlling pig populations are being explored, trapping has been and still is the most commonly used method of population control for many public and private land managers. We conducted an observational study to examine the efficiency of 2 frequently used trap styles: a small, portable box‐style trap and a larger, semi‐permanent, corral‐style trap. We used game cameras to examine patterns of trap entry by wild pigs around each style of trap, and we conducted a trapping session to compare trapping success between trap styles. Adult female and juvenile wild pigs entered both styles of trap more readily than did adult males, and adult males seemed particularly averse to entering box traps. Less than 10% of adult male visits to box traps resulted in entries, easily the least percentage of any class at any style of trap. Adult females entered corral traps approximately 2.2 times more often per visit than box traps and re‐entered corral traps >2 times more frequently. Juveniles entered and re‐entered both box and corral traps at similar rates. Overall (all‐class) entry‐per‐visit rates at corral traps (0.71) were nearly double that of box traps (0.37). Subsequent trapping data supported these preliminary entry data; the capture rate for corral traps was >4 times that of box traps. Our data suggest that corral traps are temporally and economically superior to box traps with respect to efficiency; that is, corral traps effectively trap more pigs per trap night at a lower cost per pig than do box traps

Georgia↗

USGS2025

Confocal laser-scanning microscopy (CLSM)-based thermal maturity of Tasmanites and progress in standardization of fluorescence microspectrometry

Evaluation of thermal maturity in vitrinite-free or vitrinite-deficient sediments via fluorescence microspectrometry can provide relevant information related to petroleum exploration and thermal history assessment. However, variation in spectral fluorescence properties of alginite macerals with increasing thermal maturity is largely underexplored. Here, authors of this study have applied confocal laser-scanning microscopy (CLSM) in conjunction with fluorescence microspectrometry to a maturity series of marine Upper Devonian Tasmanites algae from the Ohio Shale (Huron Member) and a single sample from the Marcellus Formation of the Appalachian Basin. Spectral fluorescence properties of Tasmanites were evaluated in relation to orientation, measurement location, and the number of measurements per sample, and were compared to published literature. Emission spectra of Tasmanites from continuous wave laser excitation (405 nm) were acquired from sections perpendicular and parallel to bedding and at different positions within individual Tasmanites bodies. The results showed a progressive red-shift in emission maxima (λ max ) in a large sample sized maturity series ( N = 19), e.g., 493 to 578 nm for the perpendicular section at middle position. Further, blue-shifted apex and mineral-adjacent positions within sections perpendicular to bedding were observed, with the latter being reported here for the first time. While blue-shift at apex positions can be attributed to mechanical deformation-induced reorientation of photoselected fluorophores, the blue-shifted mineral-adjacent positions could result from strain loading and development of a plastic deformation region at the mineral contact zone with Tasmanites . A decrease in standard deviation with increasing number of measured emission maxima is well-observed, and 15 to 20 individual measurements per sample appears sufficient for low standard deviation and coefficient of variance. CLSM-derived thermal maturity parameters indicated that a moderate positive correlation of red/green quotient (Q 650/500 ; R 2 = 0.67) with solid bitumen reflectance (BR o in %) exists. For reproducible results, the determination of λ max and Q 650/500 should be conducted exclusively in the middle position at perpendicular and parallel sections of the polished whole-rock pellets, where the lowest standard deviation in measurement was observed. These results strengthen the suitability and relevance of the CLSM technique in thermal maturity studies of dispersed organic matter (DOM) and contribute to the standardization of fluorescence microspectrometry methods in organic petrology investigation.

Kentucky, Ohio, Virginia, West Virginia↗

USGS2000

The enigma of the Arthur's Pass, New Zealand, earthquake: 1. Reconciling a variety of data for an unusual earthquake sequence

The 1994 Arthur's Pass earthquake ( M W 6.7) is the largest in a recent sequence of earthquakes in the central South Island, New Zealand. No surface rupture was observed, the aftershock distribution was complex, and routine methods of obtaining the faulting orientation of this earthquake proved contradictory. We use a range of data and techniques to obtain our preferred solution, which has a centroid depth of 5 km, M 0 =1.3 × 10 19 N m, and a strike, dip, and rake of 221°, 47°, 112°, respectively. Discrepancies between this solution and the Harvard centroid moment tensor, together with the Global Positioning System (GPS) observations and unusual aftershock distribution, suggest that the rupture may not have occurred on a planar fault. A second, strike slip, subevent on a more northerly striking plane is suggested by these data but neither the body wave modeling nor regional broadband recordings show any complexity or late subevents. We relocate the aftershocks using both one-dimensional and three-dimensional velocity inversions. The depth range of the aftershocks (1–10 km) agrees well with the preferred mainshock centroid depth. The aftershocks near the hypocenter suggest a structure dipping toward the NW, which we interpret to be the mainshock fault plane. This structure and the Harper fault, ∼15 km to the south, appear to have acted as boundaries to the extensive aftershock zone trending NNW-SSE. Most of the M L ≥ 5 aftershocks, including the two largest ( M L 6.1 and M L 5.7), clustered near the Harper fault and have strike slip mechanisms consistent with motion on this fault and its conjugates. Forward modeling of the GPS data suggests that a reverse slip mainshock, combined with strike slip aftershock faulting in the south, is able to match the observed displacements. The occurrence of this earthquake sequence implies that the level of seismic hazard in the central South Island is greater than previous estimates.

Arthur's Pass↗

USGS1998

Analysis of simulated advanced spaceborne thermal emission and reflection (ASTER) radiometer data of the Iron Hill, Colorado, study area for mapping lithologies

The advanced spaceborne thermal emission and reflection (ASTER) radiometer was designed to record reflected energy in nine channels with 15 or 30 m resolution, including stereoscopic images, and emitted energy in five channels with 90 m resolution from the NASA Earth Observing System AMI platform. A simulated ASTER data set was produced for the Iron Hill, Colorado, study area by resampling calibrated, registered airborne visible/infrared imaging spectrometer (AVIRIS) data, and thermal infrared multispectral scanner (TIMS) data to the appropriate spatial and spectral parameters. A digital elevation model was obtained to simulate ASTER-derived topographic data. The main lithologic units in the area are granitic rocks and felsite into which a carbonatite stock and associated alkalic igneous rocks were intruded; these rocks are locally covered by Jurassic sandstone, Tertiary rhyolitic tuff, and colluvial deposits. Several methods were evaluated for mapping the main lithologic units, including the unsupervised classification and spectral curve-matching techniques. In the five thermalinfrared (TIR) channels, comparison of the results of linear spectral unmixing and unsupervised classification with published geologic maps showed that the main lithologic units were mapped, but large areas with moderate to dense tree cover were not mapped in the TIR data. Compared to TIMS data, simulated ASTER data permitted slightly less discrimination in the mafic alkalic rock series, and carbonatite was not mapped in the TIMS nor in the simulated ASTER TIR data. In the nine visible and near-infrared channels, unsupervised classification did not yield useful results, but both the spectral linear unmixing and the matched filter techniques produced useful results, including mapping calcitic and dolomitic carbonatite exposures, travertine in hot spring deposits, kaolinite in argillized sandstone and tuff, and muscovite in sericitized granite and felsite, as well as commonly occurring illite/muscovite. However, the distinction made in AVIRIS data between calcite and dolomite was not consistently feasible in the simulated ASTER data. Comparison of the lithologie information produced by spectral analysis of the simulated ASTER data to a photogeologic interpretation of a simulated ASTER color image illustrates the high potential of spectral analysis of ASTER data to geologic interpretation.

Journal of Geophysical Research D: Atmospheres↗

USGS1985

A uniform technique for flood frequency analysis.

This uniform technique consisted of fitting the logarithms of annual peak discharges to a Pearson Type III distribution using the method of moments. The objective was to adopt a consistent approach for the estimation of floodflow frequencies that could be used in computing average annual flood losses for project evaluation. In addition, a consistent approach was needed for defining equitable flood-hazard zones as part of the National Flood Insurance Program. -from ASCE Publications Information

Journal of Water Resources Planning and Management↗

USGS2023

Crop water use dynamics over arid and semi-arid croplands in the lower Colorado River Basin

Numerous studies have evaluated the application of Remote Sensing (RS) techniques for mapping actual evapotranspiration (ETa) using Vegetation-Index-based (VI-based) and surface energy balance methods (SEB). SEB models computationally require a large effort for application. VI-based methods are fast and easy to apply and could therefore potentially be applied at high resolution; however, the accuracy of VI-based methods in comparison to SEB-based models remains unclear. We tested the ETa computed with the modified 2-band Enhanced Vegetation Index (METEVI2) implemented in the Google Earth Engine – for mapping croplands’ water use dynamics in the Lower Colorado River Basin. We compared METEVI2 with the well-established RS-based products of OpenET (Ensemble, eeMETRIC, SSEBop, SIMS, PT_JPL, DisALEXI and geeSEBAL). METEVI2 was then evaluated with measured ETa from four wheat fields (2017–2018). Results indicated that the monthly ETa variations for METEVI2 and OpenET models were comparable, though of varying magnitudes. On average, METEVI2 had the lowest difference rate from the average observed ETa with 17 mm underestimation, while SIMS had the highest difference rate (82 mm). Findings show that METEVI2 is a cost-effective ETa mapping tool in drylands to track crop water use. Future studies should test METEVI2’s applicability to croplands in more humid regions.

Lower Colorado River basin↗