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USGS2023

Food caching by a solitary large carnivore reveals importance of intermediate-sized prey

Pumas ( Puma concolor ) are solitary large carnivores that exhibit high energetic investments while hunting prey that often take multiple days to consume. Therefore, pumas should behave in a way to maximize their energetic gains, including using caching, which is a behavior used by many mammal species to preserve and store food or to conceal it from conspecifics and scavengers to limit their losses. Yet pumas do not always cache their kills. In order to understand caching behavior, we used variables associated with the kills such as prey mass, search time, climate, and habitat to test 20 ecological models (representing four a priori hypotheses: food perishability, resource pulse, consumption time, and kleptoparasitism deterrence) in an information-theoretic approach of model selection to explore factors related to the caching behavior. Models were run with information from tracked radio-collared pumas in California over a 2.5-year period and identified a total of 352 kills. Overall, we documented pumas caching 61.5% of their kills, including 71.6% of Black-tailed Deer ( Odocoileus hemionus columbianus ), their primary prey in the study area. The model with a quadratic effect of adjusted mass of prey on puma caching probability had all of the empirical support ( w = 1.00). Specifically, pumas were most likely to cache intermediate-sized prey, such as yearling and adult female deer, and also fed from cached kills for longer periods of time. Larger prey may be too large to easily cache, making it less energetically efficient—while small prey can often be consumed quickly enough to not require caching. This suggests that intermediate-sized prey may be the optimal size for caching, allowing a puma to feed for multiple days while not greatly increasing energetic output. The hypotheses we tested were not mutually exclusive and pumas caching their prey may occur for several reasons; nevertheless, our study demonstrated that pumas use caching to extend their foraging time and maximize energetic gains when preying on intermediate-sized prey.

California↗

USGS2014

Nutritional stress affects corticosterone deposition in feathers of Caspian tern chicks

Stressful environmental conditions affect the adrenocortical function of developing animals, which can have consequences for their fitness. Discovery of the avian stress hormone corticosterone (CORT) in feathers has the potential to broaden the application of endocrine research in ecological and evolutionary studies of wild birds by providing a long-term measure of CORT secretion. Mechanisms of CORT deposition in feathers are not well known and few studies have related feather CORT to circulating plasma CORT during feather growth. Our objective was to experimentally test the validity of using feather CORT as a measure of CORT secretion in developing birds experiencing nutritional stress. Caspian tern Hydroprogne caspia chicks were fed ad libitum or restricted (35% less than ad libitum) diets for four weeks. We measured CORT in feathers from these chicks to examine the relationship between feather CORT concentrations and nutritional limitation, circulating plasma CORT, and feather development. We found that feather CORT was higher in controls fed ad libitum than in restricted individuals, despite higher levels of plasma CORT in restricted chicks compared to controls. Feather mass and growth rates were strongly and positively related to feather CORT concentrations in both treatments. This is the first experimental study to show that feather CORT concentrations can be lower in response to nutritional stress, even when plasma CORT concentrations are elevated. Our results indicate that CORT deposition in feathers may be confounded when feather mass and growth rates are compromised by nutritional stress. We conclude that feather CORT can be used for assessing nutritional stress in growing birds, but the direction of response depends on how strongly stress affects feather development.

Journal of Avian Biology↗

USGS2008

Effects of weather on survival in populations of boreal toads in Colorado

Understanding the relationships between animal population demography and the abiotic and biotic elements of the environments in which they live is a central objective in population ecology. For example, correlations between weather variables and the probability of survival in populations of temperate zone amphibians may be broadly applicable to several species if such correlations can be validated for multiple situations. This study focuses on the probability of survival and evaluates hypotheses based on six weather variables in three populations of Boreal Toads (Bufo boreas) from central Colorado over eight years. In addition to suggesting a relationship between some weather variables and survival probability in Boreal Toad populations, this study uses robust methods and highlights the need for demographic estimates that are precise and have minimal bias. Capture-recapture methods were used to collect the data, and the Cormack-Jolly-Seber model in program MARK was used for analysis. The top models included minimum daily winter air temperature, and the sum of the model weights for these models was 0.956. Weaker support was found for the importance of snow depth and the amount of environmental moisture in winter in modeling survival probability. Minimum daily winter air temperature was positively correlated with the probability of survival in Boreal Toads at other sites in Colorado and has been identified as an important covariate in studies in other parts of the world. If air temperatures are an important component of survival for Boreal Toads or other amphibians, changes in climate may have profound impacts on populations. Copyright 2008 Society for the Study of Amphibians and Reptiles.

Journal of Herpetology↗

USGS2025

An approach to modeling abundance of marine wildlife over space and time using unstructured aerial surveys

Estimating spatial and temporal patterns in abundance is often a goal of ecological studies and can be useful for informing management decisions, such as determining the optimal placement of wildlife protection zones. However, estimating abundance can be difficult in practice, especially over large areas, because of imperfect detection, where individuals are present but not detected because of either availability or observer error. Several methods for estimating abundance that account for imperfect detection exist but can be logistically challenging to implement. We present a simpler approach to some of the more commonly used techniques for estimating the abundance of marine wildlife over space and time from unstructured aerial surveys. This approach combines a spatial model for count data with auxiliary information on detection probability obtained from small-scale or previous studies. We employ generalized linear models and generalized additive models with spatial habitat covariates to illustrate this approach using maximum-likelihood with free, open-source statistical software. This framework is intended to be accessible and flexible, requiring lower survey costs and less computation time than other alternatives for estimating abundance. Indeed, our simulation results show that this approach can reduce computation times, while appropriately characterizing uncertainty, compared to a Bayesian approach. We also present R code for our approach using an example of estimating Florida manatee ( Trichechus manatus latirostris ) abundance in Indian River County in Florida, USA. This approach could be applied to other study systems and marine wildlife species using unstructured aerial surveys.

Florida↗

USGS2021

Seasonal controls on sediment delivery and hydrodynamics in a vegetated tidally influenced interdistributary island

River deltas are maintained by a continuous supply of terrestrial sediments that provide critical land building material to help sustain and protect vulnerable ecological communities and serve as natural storm protection barriers. Local hydrodynamics are important in determining the degree to which fluvial sediments are removed from the water column and retained on the delta complex. During 2014, we measured hydrodynamics and sediment transport characteristics at one of the world's most rapidly prograding deltas, the Wax Lake delta in Louisiana, USA. We observed waves to be the dominant source of bottom stress for 70% of our observations. Sediment concentration tended to increase with shear stress, but only after stresses exceeded 0.01–0.02 Pa. Significant wave height and bottom stress were substantially reduced after June, when the emergence of American lotus ( Nelumbo lutea ) formed a dense canopy over the intertidal regions of the island splay. Hydrodynamics during these summer vegetated conditions were much more favorable to floc formation, and by extension particle settling, as shown by trends in the Kolmogorov microscale parameter over the course of the measurement campaign. Together, these findings suggest that the timing between peak river discharge and the emergence of vegetation may have a strong influence on rates of progradation in seasonally vegetated delta splays, whereby sediments delivered by flood events that extend late into summer may be governed by hydrodynamics that favor particle deposition, whereas those delivered prior to the summer may be more prone to remain in suspension and bypass the delta complex.

Louisiana↗

USGS2011

Trophic ecology and gill raker morphology of seven catostomid species in Iowa rivers

Understanding the trophic ecology of closely‐related species is important for providing insight on inter‐specific competition and resource partitioning. Although catostomids often dominate fish assemblages in lotic systems, little research has been conducted on their ecology. This study was developed to provide information on the trophic ecology of catostomids in several Iowa rivers. Food habits, diet overlap, and gill raker morphology were examined for highfin carpsucker Carpiodes velifer , quillback C. cyprinus , river carpsucker C. carpio , golden redhorse Moxostoma erythrurum, shorthead redhorse M. macrolepidotum , silver redhorse M. anisurum, and northern hogsucker Hypentelium nigricans sampled from four Iowa rivers (2009) . Diet overlap among all species was calculated with Morista’s index ( C ). Food habit niche width was quantified with Levin’s index ( B ) and similarity in gill raker morphology was compared with analysis of covariance. Values from Morista’s index suggested significant overlap in the diets of highfin carpsucker and river carpsucker ( C = 0.81), quillback and river carpsucker ( C = 0.66), and shorthead redhorse and silver redhorse ( C = 0.67). Levin’s index indicated that golden redhorse ( B = 0.32), quillback ( B = 0.53), and river carpsucker ( B = 0.41) had the most generalized feeding strategies as their food niche widths were substantially wider than the other species. Gill raker length and spacing were positively correlated with the standard length of the fish for all species (gill raker length: r 2 = 0.67–0.88, P ≤ 0.01; gill raker spacing: r 2 = 0.63–0.73, P ≤ 0.01). Slopes of regression of gill raker length and spacing to standard lengths were significantly (P ≤ 0.05) different among species, indicating that rates of change in gill raker morphology with body length varied among species. Differences in gill raker morphology likely allow catostomids to partition resources and reduce competitive interactions.

Journal of Applied Ichthyology↗

USGS2018

Factors influencing fine sediment on stream beds in the Midwestern United States

Fine sediment (particles <2 mm in diameter) in stream beds has wide-ranging effects on hydraulics, geomorphology, and ecology and is a primary focus for stream quality management in many regions. We identify reach- and basin-scale factors associated with fine sediment in the beds of 83 stream reaches in the Midwestern United States using recursive partitioning of sand-bed and gravel-bed streams and a generalized linear model for the fraction of a stream bed covered by fine sediment. A water-surface gradient of 0.00075 is the best single determinant (80% correct classification) distinguishing sand-bed streams (lower gradient) from gravel-bed streams (higher gradient). In the higher gradient category, sand-bed streams generally had more variable monthly precipitation than gravel-bed streams. The fractional response model indicated that the proportion of a stream bed composed of fine sediment is related to high sediment supply and low transport capacity but also high gravel transport capacity. This result is consistent with both theory and observations that bed material can be transported indiscriminately with respect to particle size under high shear stress, which will drive the particle size distribution of bed material toward the distribution of supply. Management of fine sediment in Midwestern streams has been approached largely by focusing on sediment supply, which may be immutable in some places due to the landscape position or glacial history. Retention of coarse sediment is an alternative management approach to reduce the fraction of fine sediment in the beds of some Midwestern streams.

Journal of Environmental Quality↗

USGS2010

Influence of roads, rivers, and mountains on natal dispersal of white-tailed deer

Natural and anthropogenic landscape features, such as rivers, mountain ranges, and roads can alter animal dispersal paths and movement patterns. Consequently landscape, through its effects on dispersal, may influence many ecological processes, including disease transmission, invasion dynamics, and gene flow. To investigate influences of landscape features on dispersal patterns of a large mammal, we captured and radiomarked 363 juvenile male white-tailed deer (Odocoileus virginianus), including 212 confirmed dispersers, in 2 topographically dissimilar study areas in Pennsylvania, USA. Dispersal azimuths were uniformly distributed in the western study area (WSA), where there was irregular, hilly topography. Mean dispersal azimuths paralleled ridge direction in the eastern study area, where long parallel ridges were aligned northeastsouthwest. Major roads in both areas and a large river in the WSA were semipermeable barriers to dispersal of juvenile males; dispersal paths were less likely to intersect these linear features. Dispersal movements were direct and brief, typically lasting <12 hours. For all dispersers, we found no evidence for preference or avoidance of establishing adult, postdispersal ranges in proximity to roads; however, deer that encountered roads near the terminus of their dispersal path were more likely to stop on the near side. Further, for deer that established postdispersal home ranges near major roads, these features influenced range placement such that locations were typically clustered on one side of the road. The influence of roads, rivers, and mountains on dispersal paths and postdispersal locations of white-tailed deer suggest that landscape-specific features should be considered in conservation and management of this and possibly other species of large mammals. ?? 2010 The Wildlife Society.

Journal of Wildlife Management↗

USGS2024

Seroprevalence, blood chemistry, and patterns of canine parvovirus, distemper virus, plague, and tularemia in free-ranging coyotes (Canis latrans) in northern New Mexico, USA.

Wildlife diseases have implications for ecology, conservation, human health, and health of domestic animals. They may impact wildlife health and population dynamics. Exposure rates of coyotes ( Canis latrans ) to pathogens such as Yersinia pestis , the cause of plague, may reflect prevalence rates in both rodent prey and human populations. We captured coyotes in north-central New Mexico during 2005–2008 and collected blood samples for serologic surveys. We tested for antibodies against canine distemper virus (CDV, Canine morbillivirus ), canine parvovirus (CPV, Carnivore protoparvovirus ), plague, tularemia ( Francisella tularensis ), and for canine heartworm ( Dirofilaria immitis ) antigen. Serum biochemistry variables that fell outside reference ranges were probably related to capture stress. We detected antibodies to parvovirus in 32/32 samples (100%), and to Y. pestis in 26/31 (84%). More than half 19/32 (59%) had antibodies against CDV, and 5/31 (39%) had antibodies against F. tularensis . We did not detect any heartworm antigens ( n = 9). Pathogen prevalence was similar between sexes and among the three coyote packs in the study area. Parvovirus exposure appeared to happen early in life, and prevalence of antibodies against CDV increased with increasing age class. Exposure to Y. pestis and F. tularensis occurred across all age classes. The high coyote seroprevalence rates observed for CPV, Y. pestis , and CDV may indicate high prevalence in sympatric vertebrate populations, with implications for regional wildlife conservation as well as risk to humans via zoonotic transmission.

New Mexico↗

USGS2020

Trends and biological effects of environmental contaminants in lamprey

Environmental contamination is of global concern. Lamprey are scientifically, ecologically, culturally, and economically important fishes. Our study represents the first synthesis ever on environmental contamination in lamprey. Objectives of this study include: (1) evaluate lethal and sublethal effects of environmental contaminants on lamprey, thereby providing insight into the potential for environmental contaminants to affect lamprey abundance, (2) highlight the unique characteristics of contaminant accumulation in lamprey, (3) determine whether spatial and temporal trends observed in contaminant concentrations of other top predators of aquatic food webs are reflected in the spatial and temporal trends of contaminant concentrations of lamprey, (4) identify key environmental contaminants affecting consumption advisories for people eating lamprey, and (5) identify important gaps in our knowledge of environmental contamination in lamprey. The geographic scope of this synthesis is worldwide. We conclude that, in general, the environmental contaminant concentrations that have been experienced by lamprey in the wild appear to be nonlethal to lamprey. However, environmental contaminants exert sublethal effects on lamprey. Sea lamprey ( Petromyzon marinus ) and Pacific lamprey ( Entosphenus tridentatus ) are relatively high in total mercury (Hg) concentration compared with other fishes. Compared with other top predators, lamprey are relatively low in polychlorinated biphenyl (PCB) concentration and concentrations of organochlorine pesticides. We also conclude that regulations on the use of PCBs, beginning in the 1970s, were effective in dramatically reducing PCB concentration in lamprey since the 1970s. Emerging contaminants, such as pharmaceuticals, microplastics, and per- and polyfluorinated alkyl substances (PFAS), have yet to be studied in lamprey.

Journal of Great Lakes Research↗

USGS2026

Leucism in a family group and a review of color aberrations in Burrowing Owls ( Athene cunicularia )

Avian color aberrations capture public interest and sometimes indicate ecological problems. Diagnosing color aberration type can be difficult because nomenclature is inconsistent, appearance of color aberrations vary, typical coloration varies, and there are many undocumented color aberration types. One type of recognized avian color aberration is leucism. Leucism is often colloquially used to refer to all birds that are paler than normal but not albino, but it specifically refers to a plumage aberration in which, from hatching onward, birds are either all white or have patches of bilaterally symmetrical white feathers mixed with normally colored feathers, while retaining black pupils. Here, we document a case of leucism in a family of North American Burrowing Owls ( Athene cunicularia ). We observed a family group (two adults and five juveniles) of five leucistic, nearly all white owls, and two typically colored owls, in the Conata Basin, South Dakota, USA, in summer 2024. We also compiled all searchable records of color aberrations in Burrowing Owls across their North and South American range. We found 60 records of color aberrations, seven of which were cases of potential leucism. Twenty-five color aberrations were an unknown type in which only eye color was affected, all of them in Florida (USA) or south/central Brazil. Documenting color aberrations in birds can help expand our understanding of the types, causes, and consequences of color aberrations as well as the pigments and genetics that underly normal coloration.

South Dakota↗

USGS2011

Northern goshawk monitoring in the western Great Lakes bioregion

Uncertainties about factors affecting Northern Goshawk ( Accipiter gentilis ) ecology and the status of populations have added to the challenge of managing this species. To address data needs for determining the status of goshawk populations, Hargis and Woodbridge (2006) developed a bioregional monitoring protocol based on estimating occupancy. The goal of our study was to implement this protocol and collect data to determine goshawk population status in the western Great Lakes (WGL) bioregion, which encompasses portions of Minnesota, Wisconsin, and Michigan, and is a mixture of private and public property. We used 366 goshawk nest locations obtained between 1979 and 2006 throughout the WGL bioregion to develop a model of landscape use consisting of forest canopy cover and land-cover covariates. We then used the model to develop a stratified sampling design for selecting 600-ha Primary Sampling Units (PSUs) to survey for goshawks. Project collaborators surveyed 86 PSUs for goshawk presence using broadcasted calls twice between mid-May and mid-August 2008, and recorded 30 goshawk detections in 21 different PSUs. Seventy-four percent of detections occurred at call stations with canopy closure >75%. Goshawk detection probabilities were 0.549 ± 0.118 (standard error) for the first visit to PSUs and 0.750 ± 0.126 for the second visit. We estimated the proportion of PSUs occupied by goshawks as 0.266 ± 0.047, which corresponded to 5184 ± 914 PSUs occupied by goshawks in our study area and suggested that goshawks are widely, but sparsely, distributed throughout the WGL bioregion.

Michigan, Minnesota, Wisconsin↗

USGS2025

Visioning and conceptual framework for coordinating Great Lakes connecting waters research and monitoring

The Laurentian Great Lakes are connected via naturally occurring straits and rivers: St. Marys River, Straits of Mackinac, St. Clair-Detroit River System, Niagara River, and the St. Lawrence River. Despite the historical ecological and economic importance of these waters, international agreements (e.g., Great Lakes Water Quality Agreement) only recently explicitly named the Great Lakes Connecting Waters (GLCWs), requiring governments to address the challenges of adequate restoration and protection from historical use and degradation. Standardized research and monitoring activities are needed; however, there is no established mechanism for coordination across the GLCWs. A three-day summit in 2023 convened experts to form the initial framework for a GLCWs Collaborative to increase standardizations and knowledge transfer. Participants drafted a governance structure and priorities following the principles of collective impact but allowed for place-based specificity for local connecting water organizations. Priorities and suggestions for success included: 1) co-development of the collaborative with all rights holders, stakeholders, and surrounding communities; 2) investment in research and technology specific to GLCWs; 3) investment in information transfer and training; 4) increased communication; and 5) better integration into existing Great Lakes research, monitoring, and funding programs. Expanding participation in all local GLCWs organizations with principles of inclusivity was identified as a larger collaborative goal. Next steps in the development of a GLCWs Collaborative include increased communication and formation of working groups and obtaining funding for a dedicated organization to begin supporting activities (communication, facilitation, logistics). By using a deliberate process for establishment, the potentially slower time frame for establishment may result in increased participation and success.

Laurentian Great Lakes↗

USGS2022

Atmospheric river storm flooding influences tidal marsh elevation building processes

Disturbances are a key component of ecological processes in coastal ecosystems. Investigating factors that affect tidal marsh accretion and elevation change is important, largely due to accelerating sea-level rise and the ecological and economic value of wetlands. Sediment accumulation rates, elevation change, and flooding were examined at five marshes along a riverine-tidal gradient in the northern San Francisco Bay-Delta, California, USA during an Atmospheric River storm event in 2017 using Surface Elevation Tables (SETs), feldspar marker horizons (MH), and continuous water-level sensors. Our results showed that localized marsh flooding increased during the storm event, but not evenly across sites. Marsh surface elevation increased the most at the tidal freshwater marsh site in response to the storms, with an average surface elevation gain of 45.6 ± 13.1 mm, and the least at a tidal saline marsh with an average surface elevation gain of 4.0 ± 1.2 mm. A marsh located on the large embayment did not exhibit an immediate response to the storm but had a surface elevation gain of 21.5 ± 13.7 mm 6 months after the storm. During the storm period, marsh distance to the bay was the strongest predictor of elevation change, followed by SET-MH elevations. Conversely, during non-storm periods, SET-MH elevation was a relatively strong predictor of elevation change. Atmospheric Rivers appear to be a major factor affecting short-term spatial and temporal variability in flooding and sedimentation rates in tidal marsh systems. Incorporating information about storms into monitoring could increase our understanding of how episodic storms can impact marshes.

Journal of Geophysical Research: Biogeosciences↗

USGS2013

Ammocoetes of Pacific lamprey are not susceptible to common fish rhabdoviruses of the U.S. Pacific Northwest

Pacific Lampreys Entosphenus tridentatus have experienced severe population declines in recent years and efforts to develop captive rearing programs are under consideration. However, there is limited knowledge of their life history, ecology, and potential to harbor or transmit pathogens that may cause infectious disease. As a measure of the possible risks associated with introducing wild lampreys into existing fish culture facilities, larval lampreys (ammocoetes) were tested for susceptibility to infection and mortality caused by experimental exposures to the fish rhabdovirus pathogens: infectious hematopoietic necrosis virus (IHNV) and viral haemorrhagic septicaemia virus (VHSV). Two IHNV isolates, representing the U and M genogroups, and one VHSV isolate from the IVa genotype were each delivered to groups of ammocoetes by immersion at moderate and high viral doses, and by intraperitoneal injection. Ammocoetes were then held in triplicate tanks with no substrate or sediment. During 41 d of observation postchallenge there was low or no mortality in all groups, and no virus was detected in the small number of fish that died. Ammocoetes sampled for incidence of infection at 6 and 12 d after immersion challenges also had no detectable virus, and no virus was detected in surviving fish from any group. A small number of ammocoetes sampled 6 d after the injection challenge had detectable virus, but at levels below the original quantity of virus injected. Overall there was no evidence of infection, replication, or persistence of any of the viruses in any of the treatment groups. Our results suggest that Pacific Lampreys are highly unlikely to serve as hosts that maintain or transmit these viruses.

Journal of Aquatic Animal Health↗

USGS2016

Improving spatio-temporal benefit transfers for pest control by generalist predators in cotton in the southwestern U.S.

Given rapid changes in agricultural practice, it is critical to understand how alterations in ecological, technological, and economic conditions over time and space impact ecosystem services in agroecosystems. Here, we present a benefit transfer approach to quantify cotton pest-control services provided by a generalist predator, the Mexican free-tailed bat ( Tadarida brasiliensis mexicana ), in the southwestern United States. We show that pest-control estimates derived using (1) a compound spatial – temporal model – which incorporates spatial and temporal variability in crop pest-control service values – are likely to exhibit less error than those derived using (2) a simple-spatial model (i.e., a model that extrapolates values derived for one area directly, without adjustment, to other areas) or (3) a simple-temporal model (i.e., a model that extrapolates data from a few points in time over longer time periods). Using our compound spatial–temporal approach, the annualized pest-control value was \$12.2 million, in contrast to an estimate of \$70.1 million (5.7 times greater), obtained from the simple-spatial approach. Using estimates from one year (simple-temporal approach) revealed large value differences (0.4 times smaller to 2 times greater). Finally, we present a detailed protocol for valuing pest-control services, which can be used to develop robust pest-control transfer functions for generalist predators in agroecosystems.

Arizona, California, Kansas, New Mexico, Oklahoma,↗

USGS2015

Decision support system for optimally managing water resources to meet multiple objectives in the Savannah River Basin

Managers of large river basins face conflicting demands for water resources such as wildlife habitat, water supply, wastewater assimilative capacity, flood control, hydroelectricity, and recreation. The Savannah River Basin, for example, has experienced three major droughts since 2000 that resulted in record low water levels in its reservoirs, impacting dependent economies for years. The Savannah River estuary contains two municipal water intakes and the ecologically sensitive freshwater tidal marshes of the Savannah National Wildlife Refuge. The Port of Savannah is the fourth busiest in the United States, and modifications to the harbor to expand ship traffic since the 1970s have caused saltwater to migrate upstream, reducing the freshwater marsh’s acreage more than 50 percent. A planned deepening of the harbor includes flow-alteration features to minimize further migration of salinity, whose effectiveness will only be known after all construction is completed. One of the challenges of large basin management is the optimization of water use through ongoing regional economic development, droughts, and climate change. This paper describes a model of the Savannah River Basin designed to continuously optimize regulated flow to meet prioritized objectives set by resource managers and stakeholders. The model was developed from historical data using machine learning, making it more accurate and adaptable to changing conditions than traditional models. The model is coupled to an optimization routine that computes the daily flow needed to most efficiently meet the water-resource management objectives. The model and optimization routine are packaged in a decision support system that makes it easy for managers and stakeholders to use. Simulation results show that flow can be regulated to substantially reduce salinity intrusions in the Savannah National Wildlife Refuge, while conserving more water in the reservoirs. A method for using the model to assess the effectiveness of the flow-alteration features after the deepening also is demonstrated.

Georgia, North Carolina, South Carolina↗

USGS2018

Spatial variability of sediment transport processes over intratidal and subtidal timescales within a fringing coral reef system

Sediment produced on fringing coral reefs that is transported along the bed or in suspension affects ecological reef communities as well as the morphological development of the reef, lagoon, and adjacent shoreline. This study quantified the physical process contribution and relative importance of sea‐swell waves, infragravity waves, and mean currents to the spatial and temporal variability of sediment in suspension. Estimates of bed shear stresses demonstrate that sea‐swell waves are the key driver of the suspended sediment concentration (SSC) variability spatially (reef flat, lagoon, and channels) but cannot fully describe the SSC variability alone. The comparatively small but statistically significant contribution to the bed shear stress by infragravity waves and currents, along with the spatial availability of sediment of a suitable size and volume, is also important. Although intratidal variability in SSC occurs in the different reef zones, the majority of the variability occurs over longer slowly varying (subtidal) timescales, which is related to the arrival of large swell waves at a reef location. The predominant flow pathway, which can transport suspended sediment, consists of cross‐reef flow across the reef flat that diverges in the lagoon and returns offshore through channels. This pathway is primarily due to subtidal variations in wave‐driven flows but can also be driven alongshore by wind stresses when the incident waves are small. Higher frequency (intratidal) current variability also occurs due to both tidal flows and variations in the water depth that influence wave transmission across the reef and wave‐driven currents.

Western Australia↗