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At least 145 records · Page 8Linked to original sources

The LTAR Grazing Land Common Experiment at the Jornada Experimental Range: Old genetics, new precision technologies, and adaptive value chains

Rangelands and the supply chains connected to them are central to the agrifood systems of the Southwestern United States. Local ranchers are simultaneously arid lands managers, herd managers, and marketing managers. To stay in business, they must constantly adapt to unpredictable forage resources and markets while conserving soils and vegetation resources for the long term. As climate warming and drying exacerbate the complexity and difficulty of day-to-day production, producers and policy-makers are seeking alternatives to “business as usual”. To meet this need, the LTAR-Jornada team has developed a package of strategies to help producers adapt to the local and inter-regional challenges. The package includes heritage cattle, precision ranching systems, and adaptive value chains. Five ranches across the Southwest have adopted different combinations of the strategies and are partnering to measure their benefits and drawbacks in real-world conditions. Opportunities for controlled experimentation differ among the ranches, so we use LTAR’s indicator system to assess and compare results. Even as we invest in co-producing knowledge about these three strategies, we recognize that progressive aridification and urbanization of Southwestern rangelands create challenges for which a single “silver bullet” agricultural innovation is unlikely to provide durable solutions. We are learning from our customers and stakeholders about ways to adjust the development of new options.

New Mexico

Smartphone technologies and Bayesian networks to assess shorebird habitat selection

Understanding patterns of habitat selection across a species’ geographic distribution can be critical for adequately managing populations and planning for habitat loss and related threats. However, studies of habitat selection can be time consuming and expensive over broad spatial scales, and a lack of standardized monitoring targets or methods can impede the generalization of site-based studies. Our objective was to collaborate with natural resource managers to define available nesting habitat for piping plovers ( Charadrius melodus ) throughout their U.S. Atlantic coast distribution from Maine to North Carolina, with a goal of providing science that could inform habitat management in response to sea-level rise. We characterized a data collection and analysis approach as being effective if it provided low-cost collection of standardized habitat-selection data across the species’ breeding range within 1–2 nesting seasons and accurate nesting location predictions. In the method developed, >30 managers and conservation practitioners from government agencies and private organizations used a smartphone application, “iPlover,” to collect data on landcover characteristics at piping plover nest locations and random points on 83 beaches and barrier islands in 2014 and 2015. We analyzed these data with a Bayesian network that predicted the probability a specific combination of landcover variables would be associated with a nesting site. Although we focused on a shorebird, our approach can be modified for other taxa. Results showed that the Bayesian network performed well in predicting habitat availability and confirmed predicted habitat preferences across the Atlantic coast breeding range of the piping plover. We used the Bayesian network to map areas with a high probability of containing nesting habitat on the Rockaway Peninsula in New York, USA, as an example application. Our approach facilitated the collation of evidence-based information on habitat selection from many locations and sources, which can be used in management and decision-making applications.

U.S Atlantic Coast

End of the chain? Rugosity and fine-scale bathymetry from existing underwater digital imagery using structure-from-motion (SfM) technology

The rugosity or complexity of the seafloor has been shown to be an important ecological parameter for fish, algae, and corals. Historically, rugosity has been measured either using simple and subjective manual methods such as ‘chain-and-tape’ or complicated and expensive geophysical methods. Here, we demonstrate the application of structure-from-motion (SfM) photogrammetry to generate high-resolution, three-dimensional bathymetric models of a fringing reef from existing underwater video collected to characterize the seafloor. SfM techniques are capable of achieving spatial resolution that can be orders of magnitude greater than large-scale lidar and sonar mapping of coral reef ecosystems. The resulting data provide finer-scale measurements of bathymetry and rugosity that are more applicable to ecological studies of coral reefs than provided by the more expensive and time-consuming geophysical methods. Utilizing SfM techniques for characterizing the benthic habitat proved to be more effective and quantitatively powerful than conventional methods and thus might portend the end of the ‘chain-and-tape’ method for measuring benthic complexity.

Coral Reefs

The Evolution of analytical technology and its impact on water-quality studies for selected herbicides and their degradation products in water

This chapter aims to describe advances in analytical instrumentation and methods for the analyses of herbicides and their degradation products and to assess their impact on major findings of broad surveys of herbicides in water conducted by the U.S. Geological Survey(USGS) over the last two decades. Standards for water purity have been set and continually revised by governments as new contaminants that may impact human health are identified. These water-purity standards have brought continued improvement in water quality of existing water sources by reducing the amount of pollution in drinking water, treating wastewater, diverting wastewater discharge from drinking-water supplies, implementing new filtration practices, and other innovative techniques. It is vital that state-of-the-art instrumentation for analyzing organic contaminants continually be introduced into the marketplace the advancement of analytical instrumentation has given scientists the capability to continually broaden their studies of the fate of herbicides and their degradation products over the last two decades. Studies by many scientists have continually expanded the knowledge of the occurrence, persistence, and transport of herbicides and their degradation products in the hydrologic environment.

Book chapter

Remote sensing and GIS technology in the Global Land Ice Measurements from Space (GLIMS) Project

Global Land Ice Measurements from Space (GLIMS) is an international consortium established to acquire satellite images of the world's glaciers, analyze them for glacier extent and changes, and to assess these change data in terms of forcings. The consortium is organized into a system of Regional Centers, each of which is responsible for glaciers in their region of expertise. Specialized needs for mapping glaciers in a distributed analysis environment require considerable work developing software tools: terrain classification emphasizing snow, ice, water, and admixtures of ice with rock debris; change detection and analysis; visualization of images and derived data; interpretation and archival of derived data; and analysis to ensure consistency of results from different Regional Centers. A global glacier database has been designed and implemented at the National Snow and Ice Data Center (Boulder, CO); parameters have been expanded from those of the World Glacier Inventory (WGI), and the database has been structured to be compatible with (and to incorporate) WGI data. The project as a whole was originated, and has been coordinated by, the US Geological Survey (Flagstaff, AZ), which has also led the development of an interactive tool for automated analysis and manual editing of glacier images and derived data (GLIMSView). This article addresses remote sensing and Geographic Information Science techniques developed within the framework of GLIMS in order to fulfill the goals of this distributed project. Sample applications illustrating the developed techniques are also shown. ?? 2006 Elsevier Ltd. All rights reserved.

Computers & Geosciences

Using motion-sensor camera technology to infer seasonal activity and thermal niche of the desert tortoise ( Gopherus agassizii )

Understanding the relationships between environmental variables and wildlife activity is an important part of effective management. The desert tortoise ( Gopherus agassizii ), an imperiled species of arid environments in the southwest US, may have increasingly restricted windows for activity due to current warming trends. In summer 2013, we deployed 48 motion sensor cameras at the entrances of tortoise burrows to investigate the effects of temperature, sex, and day of the year on the activity of desert tortoises. Using generalized estimating equations, we found that the relative probability of activity was associated with temperature (linear and quadratic), sex, and day of the year. Sex effects showed that male tortoises are generally more active than female tortoises. Temperature had a quadratic effect, indicating that tortoise activity was heightened at a range of temperatures. In addition, we found significant support for interactions between sex and day of the year, and sex and temperature as predictors of the probability of activity. Using our models, we were able to estimate air temperatures and times (days and hours) that were associated with maximum activity during the study. Because tortoise activity is constrained by environmental conditions such as temperature, it is increasingly vital to conduct studies on how tortoises vary their activity throughout the Sonoran Desert to better understand the effects of a changing climate.

California

Using multiple logistic regression and GIS technology to predict landslide hazard in northeast Kansas, USA

Landslides in the hilly terrain along the Kansas and Missouri rivers in northeastern Kansas have caused millions of dollars in property damage during the last decade. To address this problem, a statistical method called multiple logistic regression has been used to create a landslide-hazard map for Atchison, Kansas, and surrounding areas. Data included digitized geology, slopes, and landslides, manipulated using ArcView GIS. Logistic regression relates predictor variables to the occurrence or nonoccurrence of landslides within geographic cells and uses the relationship to produce a map showing the probability of future landslides, given local slopes and geologic units. Results indicated that slope is the most important variable for estimating landslide hazard in the study area. Geologic units consisting mostly of shale, siltstone, and sandstone were most susceptible to landslides. Soil type and aspect ratio were considered but excluded from the final analysis because these variables did not significantly add to the predictive power of the logistic regression. Soil types were highly correlated with the geologic units, and no significant relationships existed between landslides and slope aspect. ?? 2003 Elsevier Science B.V. All rights reserved.

Engineering Geology

Use of acoustic technology to define hydraulic characteristics of an estuary near the Mississippi Gulf Coast

An Acoustic Doppler Current Profiler (ADCP) was used on the Jourdan River at Interstate Highway 10 near Kiln, Mississippi, in 1996 to measure three-dimensional velocity vectors and water depths and in 1998, in combination with a global positioning system, to define channel bathymetry in the vicinity of the bridge. During a 25-hour period on September 19-20, 1996, 117 consecutive measurements of stage and discharge were obtained throughout a complete tidal cycle. These measurements were obtained during the time of year when headwater flows were minimal, and, therefore, the tidal-affected flow conditions were noticeable. The stage ranged from only 0.7 to 2.8 ft above sea level, but discharge ranged from 3,980 ft 3 /s flowing upstream to 5,580 ft 3 /s flowing downstream. The average discharge during the 25-hour period was only 80 ft 3 /s flowing downstream. By using the ADCP, full downstream flow, bi-directional flow, and full upstream flow conditions were identified. If conventional measurement techniques had been used, the bi-directional flow conditions could not have been detected since flow direction would have been based on what was seen at the water surface. These measurements were used to define the lower range of the stage-storage-volume relation inland of the highway. On June 10, 1998, the ADCP, in combination with a global positional system, was used to define channel bathymetry for the river reach from about 3,500 ft upstream to about 2,500 ft downstream of the bridge. The bathymetry was compared to past soundings obtained in the vicinity of the bridge; as much as 18 ft of total scour was indicated to have occurred at a bridge pier. Copyright ASCE 2004.

Conference Paper

Characterizing the distribution of particles in urban stormwater: advancements through improved sampling technology

A new sample collection system was developed to improve the representation of sediment in stormwater by integrating the entire water column. The depth-integrated sampler arm (DISA) was able to mitigate sediment stratification bias in storm water, thereby improving the characterization of particle size distribution from urban source areas. Collector streets had the lowest median particle diameter of 8 μm, followed by parking lots, arterial streets, feeder streets, and residential and mixed land use (32, 43, 50, 80 and 95 μm, respectively). Results from this study suggest there is no single distribution of particles that can be applied uniformly to runoff in urban environments; however, integrating more of the entire water column during the sample collection can address some of the shortcomings of a fixed-point sampler by reducing variability and bias caused by the stratification of solids in a water column.

Urban Water Journal

Development of characterization technology for fault zone hydrology

Several deep trenches were cut, and a number of geophysical surveys were conducted across the Wildcat Fault in the hills east of Berkeley, California. The Wildcat Fault is believed to be a strike-slip fault and a member of the Hayward Fault System, with over 10 km of displacement. So far, three boreholes of ∼ 150m deep have been core-drilled and borehole geophysical logs were conducted. The rocks are extensively sheared and fractured; gouges were observed at several depths and a thick cataclasitic zone was also observed. While confirming some earlier, published conclusions from shallow observations about Wildcat, some unexpected findings were encountered. Preliminary analysis indicates that Wildcat near the field site consists of multiple faults. The hydraulic test data suggest the dual properties of the hydrologic structure of the fault zone. A fourth borehole is planned to penetrate the main fault believed to lie in-between the holes. The main philosophy behind our approach for the hydrologic characterization of such a complex fractured system is to let the system take its own average and monitor a long term behavior instead of collecting a multitude of data at small length and time scales, or at a discrete fracture scale and to “up-scale,” which is extremely tenuous.

California

Use of multiple sequencing technologies to produce a high-quality genome of the fungus Pseudogymnoascus destructans , the causative agent of bat White-Nose syndrome

White-Nose syndrome has recently emerged as one of the most devastating wildlife diseases recorded, causing widespread mortality in numerous bat species throughout eastern North America. Here, we present an improvised reference genome of the fungal pathogen Pseudogymnoascus destructans for use in comparative genomic studies.

Genome Announcements

All solution processed organic thin film transistor-backplane with printing technology for electrophoretic display

In this study, solution processes were developed for backplane using an organic thin film transistor (OTFT) as a driving device for an electrophoretic display (EPD) panel. The processes covered not only the key device of OTFTs but also interlayer and pixel electrodes. The various materials and printing processes were adopted to achieve the requirements of devices and functioning layers. The performance of OTFT of the backplane was sufficient to drive EPD sheet by producing a mobility of 0.12 cm2/v x sec and on/off current ratio of 10(5).

Journal of Nanoscience and Nanotechnology

New technology for an ancient fish: A lamprey life cycle modeling tool with an R Shiny application

Lampreys (Petromyzontiformes) are an ancient group of fishes with complex life histories. We created a life cycle model that includes an R Shiny interactive web application interface to simulate abundance by life stage. This will allow scientists and managers to connect available demographic information in a framework that can be applied to questions regarding lamprey biology and conservation. We used Pacific lamprey ( Entosphenus tridentatus ) as a case study to highlight the utility of this model. We applied a global sensitivity analysis to explore the importance of individual life stage parameters to overall population size, and to better understand the implications of existing gaps in knowledge. We also provided example analyses of selected management scenarios (dam passage, fish translocations, and hatchery additions) influencing Pacific lamprey in fresh water. These applications illustrate how the model can be applied to inform conservation efforts. This tool will provide new capabilities for users to explore their own questions about lamprey biology and conservation. Simulations can hone hypotheses and predictions, which can then be empirically tested in the real world.

PLoS ONE

Restoration monitoring metric framework: Integrating innovative remote-sensing technologies: Comparisons between field and remotely sensed vegetation surveys of restored forested and grassland sites in Ohio

Restoration monitoring is generally perceived as costly and time-consuming, yet the concept of universal restoration monitoring metrics is trending for evaluation of restoration performance across spatial scales, project boundaries, and jurisdictions. Natural Resource Damage Assessment and Restoration (NRDAR) practitioners seek to restore natural resources injured by oil spills or hazardous substance releases into the environment. Therefore, a multiagency team [US Army Engineer Research and Development Center (ERDC), US Department of the Interior (DOI), and US Department of Energy (DOE)] developed and field-tested a multitiered monitoring framework, illustrating a range of field and remote-sensing techniques and methodologies. The restoration monitoring framework and field demonstration offer a unique methodology to acquire and evaluate simultaneously collected, multiscale/multiplatform data. The result of this research provides new insights to (1) assist planning, implementing, and monitoring restoration progress and effectiveness; and (2) apply common monitoring methods, endpoints, and metrics to other types of ecosystem restoration initiatives. Although the aim was to inform monitoring and management of areas that had been injured, these methods could also be used to inform restoration monitoring practices in a broader context, benefiting environmental stewardship missions of all project partners.

Final Technical Report