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At least 145 records · Page 8Linked to original sources

USGS1988

Effects of kelp forest removal on associated fish assemblages in central California

Visual surveys along subtidal belt transects were used to compare fish assemblages on an experimental and a control site before and after the removal of a canopy-forming kelp forest. The giant kelp Macrocystis pyrifera (L.) C.A. Agardh was removed at the holdfast from ≈ 1 ha of high relief structurally complex rock substratum. The abundance of seven species of fish, of which five were considered midwater species, significantly declined after the kelp was removed. No increases in abundance were noted within the experimental site. On the control site, two declines in abundance were observed, while two species increased in abundance. These results indicate that the presence of a giant kelp forest may increase the abundance and species diversity of the fish assemblages over a high relief rocky reef in central California, U.S.A.

Journal of Experimental Marine Biology and Ecology↗

USGS1999

Changes in proximate composition and somatic energy content for Pacific sand lance ( Ammodytes hexapterus ) from Kachemak Bay, Alaska relative to maturity and season

Mean dry-weight energy values of adult Pacific sand lance ( Ammodytes hexapterus ) peaked in spring and early summer (20.91 kJg −1 for males, 21.08 kJg −1 for females), then declined by about 25% during late summer and fall (15.91 kJg −1 for males, 15.74 kJg −1 for females). Late summer declines in energy density paralleled gonadal development. Gender differences in energy density (males<females) were only apparent from August to October. Adult sand lance spawn in October, entering the winter with close to their minimum whole body energy content. Juvenile sand lance exhibited a relatively constant protein to lipid ratio until they reached 80 mm fork length. Thereafter, relative proportions of protein remained constant while lipid proportions increased significantly. Dry weight energy densities of juveniles increased from a minimum 16.67 kJg −1 to a maximum of 19.68 kJg −1 , and (per g) are higher than adults in late summer. The seasonal food value of adult sand lance to predators varies markedly, but maximum energetic value coincides with important feeding periods for marine mammals, fish, and seabirds.

Alaska↗

USGS2023

Integrated analysis shows how the effects of extreme flooding events propagate through fish communities to impact amphibians

Research Highlight: Davis, C. L., Walls, S. C., Barichivich, W. J., Brown, M. E., & Miller, D. A. (2022). Disentangling direct and indirect effects of extreme events on coastal wetland communities. Journal of Animal Ecology , https://doi.org/10.1111/1365-2656.13874 . Catastrophic events such as floods, hurricanes, winter storms, droughts and wildfires increasingly touch our lives either directly or indirectly. These events draw our attention to the seriousness of changes in climate not only to human well-being but also to the integrity of ecological systems upon which we depend. Understanding the impacts of extreme events on ecological systems requires the ability to characterize the cascading effects of environmental changes on the environments in which organisms live and the altered biological interactions produced. This scientific ambition represents no small challenge for the study of animal communities, which are typically difficult to census as well as dynamic in time and space. Davis et al. (2022) in a recent study in the Journal of Animal Ecology examined the amphibian and fish communities found in depressional coastal wetlands to better understand how they respond to major rainfall and flooding events. Data from the U.S. Geological Survey's Amphibian Research and Monitoring Initiative provided an 8-year record of observations as well as environmental measurements. For this study, the authors integrated techniques for assessing the dynamics of animal populations with a Bayesian implementation of structural equation modelling. Using their integrated methodological approach permitted the authors to reveal the direct and indirect effects of extreme weather events on co-occurring amphibian and fish communities while accounting for observational uncertainty and temporal variation in population-level processes. Their findings indicate that the most prominent effects of flooding on the amphibian community were caused by changes in the fish community that led to increased predation and resource competition. In their conclusions, the authors emphasize the importance of understanding networks of abiotic and biotic effects if we are to predict and mitigate the influence of extreme weather events.

Journal of Animal Ecology↗

USGS2021

Evaluating establishment success of non-native fishes introduced to inland aquatic habitats of tropical Pacific islands

An information-theoretic approach was used to evaluate non-native freshwater fish species introduced to insular habitats of Hawaii and Guam comparing successful establishments vs. failures. Since the late 1800s, as many as 81 non-native freshwater fish species have been recorded as introduced to Hawaii and Guam (combined) and 50 (62%) of these are documented as having one or more established populations. We examined eleven independent variables to investigate establishment success by creating 21 a priori logistic regression models ranked using Akaike's Information Criterion adjusted for small sample size. An additional eight post-hoc models were included that comprised the best a priori model and various combinations of individual variables. The best overall model of establishment probability included effects of taxonomic affinity (family membership), prior establishment success on other tropical islands, and hypoxia tolerance. Establishment success in Hawaii and Guam was highest for those species established on many other islands, and according to our best model air-breathing fishes were more likely to become established. Six fish families, each with from three to 18 species introduced to Pacific islands, were highly successful at establishment: Cichlidae (16 established of 18 species introduced), Poeciliidae (seven of eight), Cyprinidae (four of seven), Centrarchidae (four of four), Clariidae (three of three), and Loricariidae (three of four). Those that successfully established include both small and moderately large-bodied taxa, while representing a diverse array of other morphological and life-history traits. Pathways and motives associated with fish introductions in the Pacific have been linked to desires to develop aquaculture, enhance wild stocks of food, sport, and bait fishes, for use as biological control agents, or are linked to the ornamental fish trade. We found that many established species were introduced via multiple pathways (up to eight) and our analyses suggest that the combination of prior establishment success on other tropical islands and presence of non-native fishes in multiple pathways was indicative of high propagule pressure. Our study results and conclusions on Pacific tropical island introductions are in general agreement with previous studies on non-native freshwater fishes in other regions of the world and similar to observations in continental ecosystems and temperate zones.

Hawaii↗

USGS2021

Rapid embryonic development supports the early onset of gill functions in two coral reef damselfishes

The gill is one of the most important organs for growth and survival of fishes. Early life stages in coral reef fishes often exhibit extreme physiological and demographic characteristics that are linked to well-established respiratory and ionoregulatory processes. However, gill development and function in coral reef fishes is not well-understood. Therefore, we investigated gill morphology, oxygen uptake, and ionoregulatory systems throughout embryogenesis in two coral reef damselfishes, Acanthochromis polyacanthus and Amphiprion melanopus (Pomacentridae). In both species, we found key gill structures to develop rapidly early in the embryonic phase. Ionoregulatory cells appear on gill filaments 3-4 days post fertilization and increase in density, whilst disappearing or shrinking in cutaneous locations. Primary respiratory tissue (lamellae) appears 5-7 days post fertilization, coinciding with a peak in oxygen uptake rates of the developing embryos. Oxygen uptake was unaffected by phenylhydrazine across all ages (pre-hatch), indicating that haemoglobin is not yet required for oxygen uptake. This suggests that gills have limited contribution to respiratory functions during embryonic development, at least until hatching. Rapid gill development in damselfishes, when compared to most of the previously investigated fishes, may reflect preparations for a high-performance, challenging lifestyle on tropical reefs, but may also make reef fishes more vulnerable to anthropogenic stressors.

Journal of Experimental Biology↗

USGS1970

Control methods for snail-borne zoonoses

All trematodes which cause infections and diseases in humans (zoonoses) require snails for their first intermediate host. Some have additional intermediate hosts such as crustaceans, fishes and frogs. In this paper I have discussed the use of various procedures for controlling snail populations thereby reducing the population of trematodes whose cercariae penetrate the skin of man, or which are acquired by eating raw aquatic vegetation such as watercress, or which cause pathology in fish. Biological, chemical, and physical snail control techniques are discussed. The most promising molluscucides are copper compounds, Bayluscide, biocidal rubber and molluscicidal bait.

Journal of Wildlife Diseases↗

USGS1998

Ecology of Siberian Taimen Hucho taimen in the Lake Baikal Basin

Taimen Hucho taimen historically inhabited most tributaries and littoral areas of Lake Baikal, in south central Siberia, where they supported subsistence and commercial fisheries. Logging, pollution, and overfishing have caused dramatic population declines or local extinction of most stocks. Most of what is known about this species has been published in eastern journals and therefore is not readily available to western scientists. New data collected during the 1980s and 1990s have been combined with other reports to provide an overview of the biology and life history of this species. Taimen are long-lived fish and can reach ages of 29 years and sizes up to 60 kg. Populations can either be strictly riverine or anadromous. Adults from both life histories ascend rivers in spring to spawn and feed, and less extensive migrations occur in fall to prey on spawning omul ( Coregonus autumnalis migratorius ). Principal food items for age 1 and 2 taimen are macroinvertebrates, but young taimen quickly become piscivorous at age 2 when they consume mainly black Baikal grayling ( Thymallus arcticus baicalensis ), and sculpins ( Taracottus kneri, Cottus kesslerij ). Males reach sexual maturity at ages 7 to 8 and later for females at ages 8 to 9. Average egg production per female was about 22,000 eggs. Parasite burdens are heavy but composed of few species and mediated by prey items consumed. This fish is a highly-specialized predator and plays an indispensable role in the structure of fish communities in mountains and foothills. Taimen conservation in the Baikal region is impossible without adoption and implementation of a dedicated rehabilitation program that includes the protection of remaining populations and habitat, and possibly introduction of hatchery-reared fish in selected areas where habitat remains, but parental stocks are low.

Journal of Great Lakes Research↗

USGS2012

Nutrient enrichment and fish nutrient tolerance: Assessing biologically relevant nutrient criteria

Relationships between nutrient concentrations and fish nutrient tolerance were assessed relative to established nutrient criteria. Fish community, nitrate plus nitrite (nitrate), and total phosphorus (TP) data were collected during summer low-flow periods in 2003 and 2004 at stream sites along a nutrient-enrichment gradient in an agricultural basin in Indiana and Ohio and an urban basin in the Atlanta, Georgia, area. Tolerance indicator values for nitrate and TP were assigned for each species and averaged separately for fish communities at each site (TIV o ). Models were used to predict fish species expected to occur at a site under minimally disturbed conditions and average tolerance indicator values were determined for nitrate and TP separately for expected communities (TIV e ). In both areas, tolerance scores (TIV o /TIV e ) for nitrate increased significantly with increased nitrate concentrations whereas no significant relationships were detected between TP tolerance scores and TP concentrations. A 0% increase in the tolerance score (TIV o /TIV e = 1) for nitrate corresponded to a nitrate concentration of 0.19 mg/l (compared with a USEPA summer nitrate criterion of 0.17 mg/l) in the urban area and 0.31 mg/l (compared with a USEPA summer nitrate criterion of 0.86 mg/l) in the agricultural area. Fish nutrient tolerance values offer the ability to evaluate nutrient enrichment based on a quantitative approach that can provide insights into biologically relevant nutrient criteria.

Georgia, Indiana, Ohio↗

USGS2018

Relative importance of water-quality stressors in predicting fish community responses in midwestern streams

Fish, habitat, and water chemistry data were collected from 98 streams in the midwestern United States, an area dominated by intense cultivation of row crops, in order to identify important water‐quality stressors to fish communities. We focused on 10 stressors including riparian disturbance, riparian vegetative cover, instream fish cover, streambed sedimentation, streamflow variability, total nitrogen, total phosphorus, minimum dissolved oxygen, pesticides, and bed sediment contaminants. Fish community response variables included a measure of observed/expected taxonomic completeness; species‐specific tolerances to nitrogen, phosphorus, dissolved oxygen, and water temperature; the percent of species classified as macrohabitat generalists; and an index of pesticide toxicity to fish. Multivariate analysis indicated that total nitrogen was the most important stressor, signifying that fish communities were responding to total nitrogen despite relatively high levels common to an agricultural setting. Individually, fish taxonomic completeness decreased with increasing streambed sedimentation, whereas fish community tolerance to total phosphorus increased with increasing streambed sedimentation, riparian disturbance, and total nitrogen. These findings underscore the importance of multiple biological response metrics to better understand the effects of water‐quality stressors on fish communities and highlight the complex relations between total phosphorus and fish communities.

Midwest↗

USGS2025

Not all who meander are lost: Migrating sea lamprey follow river thalwegs to facilitate safe and efficient passage upstream

Efficient navigation is crucial for the reproductive success of many migratory species, often driven by competing pressures to conserve energy and reduce predation risk. Little is known about how non-homing species achieve this balance. We show that sea lamprey ( Petromyzon marinus ), an ancient extant vertebrate, uses persistent patterns in hydro-geomorphology to quickly and efficiently navigate through complex ecosystems. Hydrodynamic flow models coupled with bathymetric mapping and fine-scale acoustic telemetry revealed movement paths that tracked thalweg scour channels, which are often the deepest and fastest-flowing sections of a river. These paths allow rapid and efficient upstream migration and suggest the existence of a bathymetric highway system. Near-substrate swimming along this path resulted in a median of 5.8% energy savings while also promoting improved safety from nocturnally active predators. We hypothesize sea lampreys use hydrostatic pressure-guided rheotaxis to achieve this navigation. It is likely this tactic relies on sensory information from the animal's primitive lateral line and perhaps the inner ear. Insights from this study can be used to redesign conservation practices to achieve improved control where the animal is invasive and improved fish passage within its native range.

Michigan↗

USGS2007

The occurrence of the colonial ascidian Didemnum sp. on Georges Bank gravel habitat: ecological observations and potential effects on groundfish and scallop fisheries

The colonial ascidian Didemnum sp. is present on the Georges Bank fishing grounds in a gravel habitat where the benthic invertebrate fauna has been monitored annually since 1994. The species was not noted before 2002 when large colonies were first observed; and by 2003 and 2004 it covered large areas of the seabed at some locations. The latest survey in 2005 documented the tunicate's presence in two gravel areas that total more than 67 nm 2 (230 km 2 ). The affected area is located on the Northern Edge of the bank in United States waters near the U.S./Canada boundary ( Fig. 1). This is the first documented offshore occurrence of a species that has colonized eastern U.S. coastal waters from New York to Maine during the past 15–20 years ( U.S. Geological Survey, 2006). Video imagery shows colonies coalescing to form large mats that cover more than 50% of the seabed along some video/photo transects. The affected area is an immobile pebble and cobble pavement that lies at water depths of 40 to 65 m where strong semidiurnal tidal currents reach speeds of 1 to 2 kt (50–100 cm/s). The water column is mixed year round, ensuring a constant supply of nutrients to the seabed. Annual temperatures range from 4 to 15 °C ( Mountain and Holzwarth, 1989). The gravel areas are bounded by sand ridges whose mobile surfaces are moved daily by the strong tidal currents. Studies commenced here in 1994 to characterize the gravel habitat and to document the effects of fishing disturbance on it ( Collie et al., 2005).

Massachusetts↗

USGS2007

A new towed platform for the unobtrusive surveying of benthic habitats and organisms

Maps of coral ecosystems are needed to support many conservation and management objectives, as well as research activities. Examples include ground-truthing aerial and satellite imagery, characterizing essential habitat, assessing changes, and monitoring the progress of restoration efforts. To address some of these needs, the U.S. Geological Survey developed the Along-Track Reef-Imaging System (ATRIS), a boat-based sensor package for mapping shallow-water benthic environments. ATRIS consists of a digital still camera, a video camera, and an acoustic depth sounder affixed to a moveable pole. This design, however, restricts its deployment to clear waters less than 10 m deep. To overcome this limitation, a towed version has been developed, referred to as Deep ATRIS. The system is based on a light-weight, computer-controlled, towed vehicle that is capable of following a programmed diving profile. The vehicle is 1.3 m long with a 63-cm wing span and can carry a wide variety of research instruments, including CTDs, fluorometers, transmissometers, and cameras. Deep ATRIS is currently equipped with a high-speed (20 frames · s-1) digital camera, custom-built light-emitting-diode lights, a compass, a 3-axis orientation sensor, and a nadir-looking altimeter. The vehicle dynamically adjusts its altitude to maintain a fixed height above the seafloor. The camera has a 29° x 22° field-of-view and captures color images that are 1360 x 1024 pixels in size. GPS coordinates are recorded for each image. A gigabit ethernet connection enables the images to be displayed and archived in real time on the surface computer. Deep ATRIS has a maximum tow speed of 2.6 m · s-1and a theoretical operating tow-depth limit of 27 m. With an improved tow cable, the operating depth can be extended to 90 m. Here, we present results from the initial sea trials in the Gulf of Mexico and Biscayne National Park, Florida, USA, and discuss the utility of Deep ATRIS for map-ping coral reef habitats. Several example mosaics illustrate the high-quality imagery that can be obtained with this system. The images also reveal the potential for unobtrusive animal observations; fish and sea turtles are unperturbed by the presence of Deep ATRIS

Florida↗

USGS2013

Development of a stock-recruitment model and assessment of biological reference points for the Lake Erie walleye fishery

We developed an updated stock–recruitment relationship for Lake Erie Walleye Sander vitreus using the Akaike information criterion model selection approach. Our best stock–recruitment relationship was a Ricker spawner–recruit function to which spring warming rate was added as an environmental variable, and this regression model explained 39% of the variability in Walleye recruitment over the 1978 through 2006 year-classes. Thus, most of the variability in Lake Erie Walleye recruitment appeared to be attributable to factors other than spawning stock size and spring warming rate. The abundance of age-0 Gizzard Shad Dorosoma cepedianum, which was an important term in previous models, may still be an important factor for Walleye recruitment, but poorer ability to monitor Gizzard Shad since the late 1990s could have led to that term failing to appear in our best model. Secondly, we used numerical simulation to demonstrate how to use the stock recruitment relationship to characterize the population dynamics (such as stable age structure, carrying capacity, and maximum sustainable yield) and some biological reference points (such as fishing rates at different important biomass or harvest levels) for an age-structured population in a deterministic way.

North American Journal of Fisheries Management↗

USGS2005

Resilience of predators to fishing pressure on coral patch reefs

Numbers and biomass of piscivorous fish and their predation on other fish may often be high in undisturbed coral reef communities. The effects of such predation have sometimes been studied by removal of piscivores (either experimentally or by fishermen). Such perturbations have usually involved removal of large, highly vulnerable, mobile piscivores that are often actively sought in fisheries. The effects of fishing on smaller, demersal, semi-resident piscivores have been little studied. We studied such effects on the fish communities of patch reefs at Midway atoll by experimentally removing major resident, demersal, piscivorous fishes. First, four control reefs and four experimental reefs were selected, their dimensions and habitats mapped, and their visible fish communities censused repeatedly over 1 year. Census of all control and experimental reefs was continued for the following 39 months, during which known piscivores were collected repeatedly by hand spearing. Records were kept of catch and effort to calculate CPUE as an index of predator density. Spearfishing on the experimental reefs removed 2504 piscivorous fish from 12 families and 43 taxa (mostly species). The species richness of the catch did not show an overall change over the duration of the experiment. Spearman rank correlation analysis showed some unexpected positive correlations for density in numbers and biomass of major fished piscivorous groups (especially lizardfish) over the experiment. Only two relatively minor fished piscivorous taxa declined in abundance over the experiment, while the overall abundance of piscivores increased. Visual censuses of fish on the experimental reefs also failed to show reduction of total piscivores over the full experimental period. No significant trend in the abundance of lizardfish censused over the full period was apparent on any of the control reefs. The high resilience of piscivores on these experimental reefs to relatively intense fishing pressure could result from their protracted recruitment seasons, high immigration rates, cryptic habits, or naturally high abundances. A major factor was the high immigration rates of lizardfish, replacing lizardfish and other less mobile piscivores removed from the reefs by spearing. On the fished reefs, the removed lizardfish population replaced itself >20 times during the experiment; other piscivorous taxa replaced themselves only 5 times.

Journal of Experimental Marine Biology and Ecology↗

USGS2018

Refining aging criteria for northern sea otters in Washington State

Measurement of skull ossification patterns is a standard method for aging various mammalian species and has been used to age sea otters Enhydra lutris from Russia, California, and Alaska. Cementum annuli counts have also been verified as an accurate aging method for sea otters in Alaska. In this study, we compared cementum annuli count results and skull ossification patterns as methods for aging the northern sea otter, E. l. kenyoni, in Washington State. We found significant agreement between the two methods, suggesting that either method could be used to age sea otters in Washington. We found that ossification of the squamosal–jugal suture at the ventral glenoid fossa can be used to differentiate male subadults from adults. To assist field biologists or others without access to cementum annuli or skull ossification analysis techniques, we analyzed a suite of morphologic, physiologic, and developmental characteristics to assess whether a set of these more easily accessible parameters could also predict age class. We identified tooth condition score, evidence of reproductive activity in females, and tooth eruption pattern as the most useful criteria for classifying sea otters in Washington. We created a simple decision tree based on characteristics accessible in the field or at necropsy, which can be used to reliably predict age class of Washington sea otters as determined by cementum annuli. These techniques offer field biologists and marine mammal stranding networks a replicable, cost-conscious methodology to gather useful biological information from sea otters.

Washington↗

USGS2022

Round Goby captured in a North American estuary: Status and implications in the Hudson River, New York

Round Goby Neogobius melanostomus , a nonnative fish species to North America, has been rapidly expanding through the connected waterways of the Laurentian Great Lakes. Herein, we document the eastward and southern expansion of Round Goby into the Hudson River, New York, an iconic coastal estuary that drains to Long Island Sound and the Atlantic seaboard. In summer and early fall 2021, routine fish monitoring conducted by the New York State Department of Environmental Conservation documented a population of Round Goby in the tidal portion of the Hudson River. Over the course of monitoring in 2021, personnel collected 112 Round Goby between Albany, New York, and Poughkeepsie, New York, with the southernmost collection occurring approximately 140 km downstream of invasion front as reported in 2020 within the New York State Canal System. Although Round Goby previously colonized large rivers and streams in the Great Lakes watershed, there is little information about the invasion success and ecological impacts of Round Goby in estuarine environments in North America. We discuss the distribution and biological characteristics of the Hudson River Round Goby population as well as the potential ecological implications and areas of future research and monitoring for this range expansion.

New York↗

USGS2006

Hierarchical models of animal abundance and occurrence

Much of animal ecology is devoted to studies of abundance and occurrence of species, based on surveys of spatially referenced sample units. These surveys frequently yield sparse counts that are contaminated by imperfect detection, making direct inference about abundance or occurrence based on observational data infeasible. This article describes a flexible hierarchical modeling framework for estimation and inference about animal abundance and occurrence from survey data that are subject to imperfect detection. Within this framework, we specify models of abundance and detectability of animals at the level of the local populations defined by the sample units. Information at the level of the local population is aggregated by specifying models that describe variation in abundance and detection among sites. We describe likelihood-based and Bayesian methods for estimation and inference under the resulting hierarchical model. We provide two examples of the application of hierarchical models to animal survey data, the first based on removal counts of stream fish and the second based on avian quadrat counts. For both examples, we provide a Bayesian analysis of the models using the software WinBUGS.

Journal of Agricultural, Biological, and Environme↗

USGS1983

Selective control of common carp: Ineffectiveness of 2-(digeranylamino)-ethanol (GD-174) in pond trials

The candidate piscicide, 2‐(digeranylamino)‐ethanol, (commonly known as GD‐174) was subjected to efficacy trials in ponds under a wide variety of conditions. Results of the trials were disappointing considering that laboratory tests had shown the compound to be selectively toxic to common carp ( Cyprinus carpio ). Results of pretreatment, on‐site toxicity tests were misleading and indicated concentrations that failed to kill all of the carp in 19 of 23 ponds. In a few instances, the chemical killed the carp with little or no effect on nontarget fishes. No fish were killed in some trials and large numbers of nontarget fishes were killed in others. Twenty of 25 pond trials were judged to be unsuccessful. Success or failure of pond treatments could not be correlated with any particular combination of physical, chemical, and biological factors. Because the activity of GD‐174 against mixed populations of fish cannot be predicted, further development of this compound as a selective toxicant for carp has been discontinued at the National Fishery Research Laboratory.

North American Journal of Fisheries Management↗