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Hood River PIT-tag interrogation system efficiency study. Annual report of U.S. Geological Survey activities: November 2010-October 2011

Introduction During summer 2010, an agreement was made between the US Geological SurveyColumbia River Research Laboratory (USGS-CRRL) and the Confederated Tribes of the Warm Springs (CTWS) to operate an experimental Passive Integrated Transponder (PIT)-tag interrogation system (PTIS) near the mouth of the Hood River for a year and provide fishdetection efficiency estimates (Bonneville Power Administration (BPA) project number 1988- 053-03, contract number 50150). A previous agreement between Oregon Department of Fish and Wildlife (ODFW) and USGS-CRRL had funded materials acquisition, construction, and installation of the PTIS (BPA project number 1988-053-04, contract number 48684). The primary purpose of the project was to test the efficacy of a PTIS in the lower Hood River for providing data on returning adult salmonids to the Hood River as part of the Hood River Production Monitor and Evaluation project (HRPME). Because PIT tags are small, relatively inexpensive, carry no internal battery, and last through the lifespan of most fishes, they are commonly used in long term fish monitoring projects. They have been extensively used in the Columbia River basin to monitor salmonid behavior and survival through life stages and migration routes in the mainstem Columbia River (Skalski et al. 1998; Zabel and Achord 2004). Increasingly, PIT-tag detection equipment has been deployed in streams to investigate salmonid behavior (Zydlewski et al. 2001, 2006; Riley et al. 2003; Bond et al. 2007). Most of the detection systems deployed and evaluated to date have been in much smaller streams than the mainstem of the Hood River (Zydlewski et al. 2001, 2006; Bond et al. 2007; Horton et al. 2007; Connolly et al. 2008), but researchers are attempting to expand detection abilities to larger streams and rivers. Large streams and rivers can prove extremely challenging to monitor. Some systems have showed promise for contributing valuable detection data, others have proved less successful. A detection system in the Klamath River (Beeman et al. 2012), a site similar in size to the Hood River, suffered problems from cables being dislodged and high water that resulted in a detection efficiency estimate for juvenile coho salmon of less than 0.05. An additional USGS-CRRL task, under contract number 50150, was to build three antennas for use with Destron-Fearing 2001F-ISO PIT tag readers. These antennas would be 5 used at the East Fork Hood River Acclimation site. They would be placed in the outflow channel to inform managers about the number of PIT tagged steelhead smolts released to the Hood River after a period of acclimation when some mortality and predation might occur.

Oregon

Bibliography of references to avian botulism: Update

This bibliography, first compiled in 1970 (Allen and Wilson 1977) and published in 1977 in response to many requests for information on avian botulism, has been updated to include the literature published through 1980. In general, only articles dealing primarily with the avian disease are included, as opposed to those concerned with the various aspects of the biology of Clostridium botulinum , either type C or E. A few exceptions, such as Bengtson's report of the first isolation and description of the type C organism, are included for their historical interest. Progress reports and other administrative documents not available for distribution on request are excluded, as are most textbook accounts, which are generally summaries of work published elsewhere. This bibliography was a cooperative effort by the National Wildlife Health Laboratory, U.S. Fish and Wildlife Service, and the U.S. National Park Service. The National Park Service provided partial funding for the work through Contract No. 89100-0491. Although the authors attempted to list every important reference, they make no claim to complete coverage of the published literature. The authors will be grateful to users of the bibliography who call attention to errors or omissions. Wayne I. Jensen (Retired) Milton Friend, Director, National Wildlife Health Laboratory

Special Scientific Report - Wildlife

Research and development program; Conservation Division Outer Continental Shelf oil and gas operations; Technical report 1981

As a result of recommendations several years ago from the National Academy of Sciences, the University of Oklahoma, and the National Aeronautics and Space Administration (NASA), the U.S. Geological Survey has embarked upon a program of research and development to provide the technological insights needed for its regulatory operations offshore—operations which provide assurances to the public for safety and for the prevention of pollution in oil and gas drilling and production. These clear objectives are, therefore, those of the research program, not the economics of operations, which are of concern to industry. The Program is a contract research program and is an integral part of the Conservation Division. It is a focal point for deriving possible solutions from the university community, private industry, and the Federal laboratory system for identified offshore operational problems. This vast interdisciplinary body of science and technology provides the kind of research needed by the Division in its Outer Continental Shelf (OCS) operations which involve such problematic areas as structural dynamics, fluid flow, and geotechnology. The Program encourages innovation and creativity which can be accomplished only by talented scientists and engineers who are dedicated to man's endeavor to make breakthroughs in science and technology. Because the Division's mission is operational, in a sense like the U.S. Navy, the R&D Program must progress in a timely manner even though technological advances cannot really be scheduled. As the Navy's Office of Naval Research (ONR) has so successfully coped with the seeming dichotomy of anticipating the occurrence of innovations, so must the Conservation Division. Thus, USGS, like ONR, makes use of the unsolicited proposal and the best effort contract to accomplish its objectives. Good science and technology can only be accomplished when several variables converge: a talented investigator doing his own research, which happens to coincide with our needs, availability of resources, time scales, etc. Our task is to "beat the bushes" so that these people come to us with their innovative ideas and concepts. They have done so by learning of our interests through announcements of the Program in the Federal Register, reading reports which emanate from the Program, and by attending our seminars.

Open-File Report

Population estimates for the Toiyabe population of the Columbia spotted frog ( Rana luteiventris ), 2004–10

The Toiyabe population of Columbia spotted frogs ( Rana luteiventris , hereafter "Toiyabe frogs") is a geographically isolated population located in central Nevada (fig. 1). The Toiyabe population is part of the Great Basin Distinct Population Segment of Columbia spotted frogs, and is a candidate for listing under the Endangered Species Act (U.S. Fish and Wildlife Service, 2011). The cluster of breeding sites in central Nevada represents the southernmost extremity of the Columbia spotted frogs' known range (Funk and others, 2008). Toiyabe frogs are known to occur in seven drainages in Nye County, Nevada: Reese River, Cow Canyon Creek, Ledbetter Canyon Creek, Cloverdale Creek, Stewart Creek, Illinois Creek, and Indian Valley Creek. Most of the Toiyabe frog population resides in the Reese River, Indian Valley Creek, and Cloverdale Creek drainages (fig. 1; Nevada Department of Wildlife, 2003). Approximately 90 percent of the Toiyabe frogs' habitat is on public land. Most of the public land habitat (95 percent) is managed by the U.S. Forest Service (USFS), while the Bureau of Land Management (BLM) manages the remainder. Additional Toiyabe frog habitat is under Yomba Shoshone Tribal management and in private ownership (Nevada Department of Wildlife, 2003). The BLM, USFS, Nevada Department of Wildlife (NDOW), Nevada Natural Heritage Program (NNHP), Nye County, and U.S Fish and Wildlife Service (USFWS) have monitored the Toiyabe population since 2004 using mark and recapture surveys (Nevada Department of Wildlife, 2004). The USFWS contracted with the U.S. Geological Survey (USGS) to produce population estimates using these data.

Nevada

Summary of data-collection activities and effects of flooding from tropical storm Alberto in parts of Georgia, Alabama, and Florida, July 1994

Parts of central and southwestern Georgia, southeastern Alabama, and the western panhandle of Florida were devastated by floods resulting from rainfall produced by Tropical Storm Alberto in July 1994. As tributary floodwaters combined and moved downstream in the Flint, Ocmulgee, and Choctawhatchee Rivers, peak discharges exceeded the 100-year flood discharges along most stream reaches. Along the Flint River, the 100-year flood stage was exceeded at Montezuma by 3.7 ft; at Albany, by 5.1 ft; at Newton, by 3.9 ft; and at Bainbridge by 2.2 ft. Along the Ocmulgee River, the 100-year flood was exceeded at Juliette, by 5.4 ft; at Macon, by 2.2 ft; and at Hawkinsville by 3.9 ft. Peak discharges exceeded the 100-year flood discharges along the Choctawhatchee River from Newton, Ala., to Bruce, Fla. Discharge measurements were made at many gaging stations throughout the area of flooding. Streamflow velocities are obtained during the process of making the discharge measurement. Velocity data are given for selected gaging stations on two streams in Georgia. Scour around pier and abutment foundations caused settling or washout at most bridge failures. Scour mechanisms at these bridges include local scour, contraction scour, and scour plus bank instability of the general stream reach where the bridge is located. Eighteen feet of predominantly contraction scour was measured during the flood at the U.S. Highway 82 crossing of Flint River at Albany, Ga.

Alabama, Florida, Georgia

Selected test-well data from the MX-missile siting study, Tooele, Juab, Millard, Beaver, and Iron Counties, Utah

This report contains well data collected from 1979 to 1983 in a part of the Great Basin in western Utah (fig. 1). The area is characterized by a series of generally north-trending mountain ranges separated by alluviumfilled basins that are partially filled with sedimentary deposits eroded from the adjacent mountains and lacustrine sediments deposited by Lake Bonneville. Most of the intermountain basins are elongated in the northward direction, but some are almost equidimensional. This report was prepared as part of the Great Basin Regional AquiferSystem Analysis (RASA) program. The report is intended to make well data from the MX-missile siting study readily available to water-resource managers and the general public. It includes well data obtained in areas for which little or no such data have been published previously. Well-drilling and well-completion data were compiled by Ertec, Inc. (formerly Fugro National, Inc.) under contract with the U. S. Air Force. Those data along with aquifer test data, geophysical logs, and drillers1 or geologists1 logs were obtained from Ertec, Inc. under an agreement with the U.S. Air Force. The authors thank the officials of both Ertec, Inc. and the U.S. Air Force for their helpful cooperation. The U.S. Geological Survey obtained accurate locations of the test wells (pi. 1) and accurate water-level measurements in those wells (table 1). Chemical analyses of water samples collected from several of the test wells drilled in the Sevier Desert have been published in a report by Enright and Holmes (1982, table 5). Test drilling for the MX-missile siting study consisted of two parts, the verification phase and the water-resources phase. The verification jhase was designed to obtain information necessary for the design and construction of the MX-basing system. Numerous small diameter wells were bored with depths ranging from 92 to 205 feet. Two-inch diameter JVC casing with the bottom 20 feet perforated was installed in each borehole. The water-resources phase was designed to determine ground-water availibility and to estimate the effects of ground-water withdrawals required for the construction of the MX-basing system. Six large-diameter production test wells were drilled along with associated small-diameter observation wells. Depths ranged from 310 to 1,399 feet. Lithologic logs for selected production test wells or associated observation wells are listed in table 2. Geophysical logs and aquifer test data are available in the files of the U. S. Geological Survey, as indicated in table 1.

Utah

Investigations of fluvial sediments of the Niobrara River near Valentine, Nebraska

This report contains results of observations that were made from the time when a natural constriction was formed in the Niobrara River near Valentine, Nebr., to the time when it was widened by high flows. After the constriction was widened, insufficient turbulence was developed to suspend most of the sediment. The report gives information on the amount and characteristics of the sediment that moves as unmeasured load at normal sections of the stream near the constriction and at the measuring sections at the Sparks gaging station. Lateral distributions of depth, velocity, and concentration are shown for the sections where sediment discharge was measured. In addition, vertical distributions of concentration, velocity, and percentage of particles coarser than 0.25 mm are shown for the contracted section. The vertical distributions seem to indicate that the total sediment load of the stream was usually in suspension at the contracted section. Exclusive of the period during the winter when upstream reservoirs. were not flushed, the measured discharge of suspended sediment at the normal sections near the contraction averaged 47 percent and at the Sparks gaging station 41 percent of the measured sediment discharge at the contracted section. Particle sizes of suspended sediment and bed material are tabulated, and some size distributions are plotted. In conformity with bedload theory, the computed particle sizes of the unmeasured load were slightly smaller than the average particle sizes in the samples of bed material.

Circular

Cruise report; RV Coastal Surveyor Cruise C1-99; multibeam mapping of the Long Beach, California continental shelf; April 12 through May 19, 1999

The greater Los Angeles area of California is home to more than 10 million people. This large population puts increased pressure on the adjacent offshore continental shelf and margin with activities such as ocean disposal for dredged spoils, explosive disposal, waste-water outfall, and commercial fishing. The increased utilization of the shelf and margin in this area has generated accelerated multi-disciplinary research efforts in all aspects of the environment of the coastal zone. Prior to 1996 there were no highly accurate base maps of the continental shelf and slope upon which the research activities could be located and monitored. In 1996, the United States Geological Survey (USGS) Pacific Seafloor Mapping Project began to address this problem by mapping the Santa Monica shelf and margin (Fig. 1) using a state-of-the-art, high-resolution multibeam sonar system (Gardner, et al., 1996; 1999). Additional seafloor mapping in 1998 provided coverage of the continental margin from south of Newport to the proximal San Pedro Basin northwest of Palos Verdes Peninsula (Gardner, et al., 1998) (Fig. 1). The mapping of the seafloor in the greater Los Angeles continental shelf and margin was completed with a 30-day mapping of the Long Beach shelf in April and May 1999, the subject of this report. The objective of Cruise C-1-99-SC was to completely map the broad continental shelf from the eastern end of the Palos Verdes Peninsula to the narrow shelf south of Newport Beach, from the break in slope at about 120-m isobath to the inner shelf at about the 10-m isobath. Mapping the Long Beach shelf was jointly funded by the U.S. Geological Survey and the County of Orange (CA) Sanitation District and was conducted under a Cooperative Agreement with the Ocean Mapping Group from the University of New Brunswick (OMG/UNB). The OMG/UNB contracted with C&C Technologies, Inc. of Lafayette, LA for use of the RV Coastal Surveyor and the latest evolution of high-resolution multibeam sonars, a dual Kongsberg Simrad EM3000D.

California

1986 Great Lakes Seismic refraction survey (GLIMPCE): Line A - refraction mode

In the fall of 1986, the Geological Survey of Canada (GSC), the United States Geological Survey (USGS), two Canadian universities -- University of Western Ontario and University of Saskatchewan, and four American universities -- Northern Illinois University, Southern Illinois University, University of Wisconsin-Madison and University of Wisconsin-Oshkosh participated in a major deep seismic experiment in Lake Superior under the GLIMPCE (Great Lakes International Multidisciplinary Program on Crustal Evolution) umbrella. This Open-File Report presents the seismic sections for line A, which was shot specifically for refraction recording. The main target for study by this line was the Mid-Continent Rift System. All recording stations, 31 in total (26 land stations and 5 OBSs), recorded energy from shots fired every two minutes (333 m spacing) by a tuned airgun array towed by a contracted ship along line A in Lake Superior. These data are the densest such data ever recorded in the continental North America over such distances. It is also unique since coincident seismic reflection and refraction are available.

Lake Superior

External quality-assurance programs managed by the U.S. Geological Survey in support of the National Atmospheric Deposition Program/National Trends Network

The U.S. Geological Survey, Branch of Quality Systems, operates the external quality-assurance programs for the National Atmospheric Deposition Program/National Trends Network (NADP/NTN). Beginning in 1978, six different programs have been implemented?the intersite-comparison program, the blind-audit program, the sample-handling evaluation program, the field-audit program, the interlaboratory-comparison program, and the collocated-sampler program. Each program was designed to measure error contributed by specific components in the data-collection process. The intersite-comparison program, which was discontinued in 2004, was designed to assess the accuracy and reliability of field pH and specific-conductance measurements made by site operators. The blind-audit and sample-handling evaluation programs, which also were discontinued in 2002 and 2004, respectively, assessed contamination that may result from sampling equipment and routine handling and processing of the wet-deposition samples. The field-audit program assesses the effects of sample handling, processing, and field exposure. The interlaboratory-comparison program evaluates bias and precision of analytical results produced by the contract laboratory for NADP, the Illinois State Water Survey, Central Analytical Laboratory, and compares its performance with the performance of international laboratories. The collocated-sampler program assesses the overall precision of wet-deposition data collected by NADP/NTN. This report documents historical operations and the operating procedures for each of these external quality-assurance programs. USGS quality-assurance information allows NADP/NTN data users to discern between actual environmental trends and inherent measurement variability.

Open-File Report

The nature and timing of tectonism in the western facies terrane of Nevada and California; an outline of evidence and interpretations derived from geologic maps of key areas

Along the outer miogeocline of Nevada and Southern California, lower Paleozoic siliceous sediments and basalt flows, the western facies terrane emerged in Late Devonian time and were deeply eroded; but structural evidence that this event, the Antler Orogeny, involved intense folding and thrust faulting is notably scarce. Almost all the intense folding and thrust faulting of Proterozoic to Permian strata dates from the Jurassic to Eocene interval. If this tectonic history is valid, then the genesis of the Antler Orogeny is reduced to a question of vertical tectonics. Pre-Jurassic contraction involving subduction and collision with island arcs is not indicated or required, but the ultimate origin of Paleozoic tectonism remains unclear.

Professional Paper

Report of the U.S. Geological Survey Lidar Workshop sponsored by the Land Remote Sensing Program and held in St. Petersburg, FL, November 2002

The first United States Geological Survey (USGS) Light Detection And Ranging (lidar) Workshop was held November 20-22, 2002 in St. Petersburg, Florida to bring together scientists and managers from across the agency. The workshop agenda focused on six themes: 1) current and future lidar technologies, 2) lidar applications within USGS science and disciplines, 3) calibration and accuracy assessment, 4) tools for processing and evaluating lidar data sets, 5) lidar data management, and 6) commercial and contracting issues. These six themes served as the topics for workshop plenary sessions as well as the general focus for associated breakout sessions. A number of recommendations are presented regarding the role the USGS should play in the future application and development of lidar technology.

Open-File Report

Helicopter Electromagnetic and Magnetic Geophysical Survey Data for Portions of the North Platte River and Lodgepole Creek, Nebraska, June 2008

This report is a release of digital data from a helicopter electromagnetic and magnetic survey that was conducted during June 2008 in areas of western Nebraska as part of a joint hydrologic study by the North Platte Natural Resource District, South Platte Natural Resource District, and U.S. Geological Survey. The objective of the contracted survey, conducted by Fugro Airborne, Ltd., was to improve the understanding of the relationship between surface water and groundwater systems critical to developing groundwater models used in management programs for water resources. The survey covered 1,375 line km (854 line mi). A unique aspect of this survey is the flight line layout. One set of flight lines were flown paralleling each side of the east-west trending North Platte River and Lodgepole Creek. The survey also included widely separated (10 km) perpendicular north-south lines. The success of this survey design depended on a well understood regional hydrogeologic framework and model developed by the Cooperative Hydrologic Study of the Platte River Basin. Resistivity variations along lines could be related to this framework. In addition to these lines, more traditional surveys consisting of parallel flight lines separated by about 270 m were carried out for one block in each of the drainages. These surveys helped to establish the spatial variations of the resistivity of hydrostratigraphic units. The electromagnetic equipment consisted of six different coil-pair orientations that measured resistivity at separated frequencies from about 400 Hz to about 140,000 Hz. The electromagnetic data along flight lines were converted to electrical resistivity. The resulting line data were converted to geo-referenced grids and maps which are included with this report. In addition to the electromagnetic data, total field magnetic data and digital elevation data were collected. Data released in this report consist of data along flight lines, digital grids, and digital maps of the apparent resistivity and total magnetic field. The depth range of the subsurface investigation for the electromagnetic survey (estimated as deep as 60 m) is comparable to the depth of shallow aquifers. The geophysical data and hydrologic information from U.S. Geological Survey and cooperator studies are being used by resource managers to develop groundwater resource plans for the area. In addition, data will be used to refine hydrologic models in western Nebraska.

Open-File Report

Digital Geologic Map of the Wallace 1:100,000 Quadrangle, Idaho

The geology of the Wallace 1:100,000 quadrangle, Idaho was compiled by Reed S. Lewis in 1997 primarily from published materials including 1983 data from Foster, Harrison's unpublished mapping done from 1975 to 1985, Hietenan's 1963, 1967, 1968, and 1984 mapping, Hobbs and others 1965 mapping, and Vance's 1981 mapping, supplemented by eight weeks of field mapping by Reed S. Lewis, Russell F. Burmester, and Mark D. McFaddan in 1997 and 1998. This geologic map information was inked onto a 1:100,000-scale greenline mylar of the topographic base map for input into a geographic information system (GIS). The resulting digital geologic map GIS can be queried in many ways to produce a variety of geologic maps. Digital base map data files (topography, roads, towns, rivers and lakes, etc.) are not included: they may be obtained from a variety of commercial and government sources. This database is not meant to be used or displayed at any scale larger than 1:100,000 (e.g., 1:62,500 or 1:24,000). The map area is located in north Idaho. The primary sources of map data are shown in figure 2 and additional sources are shown in figure 3. This open-file report describes the geologic map units, the methods used to convert the geologic map data into a digital format, the Arc/Info GIS file structures and relationships, and explains how to download the digital files from the U.S. Geological Survey public access World Wide Web site on the Internet. Mapping and compilation was completed by the Idaho Geological Survey under contract with the U.S. Geological Survey (USGS) office in Spokane, Washington. The authors would like to acknowledge the help of the following field assistants: Josh Goodman, Yvonne Issak, Jeremy Johnson and Kevin Myer. Don Winston provided help with our ongoing study of Belt stratigraphy, and Tom Frost assisted with logistical problems and sample collection. Manuscript reviews by Steve Box, Tom Frost, and Brian White are greatly appreciated. We wish to thank Karen S. Bolm of the USGS for reviewing the digital files.

Open-File Report

Streambed scour evaluations and conditions at selected bridge sites in Alaska, 2016–17

Stream stability, flood frequency, and streambed scour potential were evaluated at 20 Alaskan river- and stream-spanning bridges lacking a quantitative scour analysis or having unknown foundation details. Three of the bridges had been assessed shortly before the study described in this report but were re-assessed using different methods or data. Channel instability related to mining may affect scour at one site, while channel instability related to flow distribution changes can be seen at one site. One bridge was closed because of abutment scour prior to the study. Otherwise, channels generally showed stable bed elevations. Contraction and abutment scour were calculated for all 20 bridges, and pier scour was calculated for the 2 bridges that had piers. Vertical contraction (pressure flow) scour was calculated for one site at which the modeled water surface was higher than the superstructure of the bridge. Hydraulic variables for the scour calculations were derived from one-dimensional and two-dimensional hydraulic models of the 1- and 0.2-percent annual exceedance probability floods (also known as the 100- and 500-year floods, respectively). Scour also was calculated for large recorded floods at two sites. At many sites, overflow of road approaches relieves the bridge during floods and lessens the potential for scour. Two-dimensional hydraulic models are superior to one-dimensional hydraulic models at distributing flow between bridges, road approaches, and floodplains, and therefore likely produce more reasonable scour values at sites with substantial floodplain flow.

Alaska

Level II scour analysis for Bridge 137 (FERRUS00070137) on U.S. Route 7, crossing Little Otter Creek, Ferrisburg, Vermont

This report provides the results of a detailed Level II analysis of scour potential at structure FERRUS00070137 on U.S. Route 7 crossing Little Otter Creek, Ferrisburg, Vermont (figures 1–8). A Level II study is a basic engineering analysis of the site, including a quantitative analysis of stream stability and scour (U.S. Department of Transportation, 1993). Results of a Level I scour investigation also are included in Appendix E of this report. A Level I investigation provides a qualitative geomorphic characterization of the study site. Information on the bridge, gleaned from Vermont Agency of Transportation (VTAOT) files, was compiled prior to conducting Level I and Level II analyses and is found in Appendix D. The site is in the Champlain section of the St. Lawrence Valley physiographic province in northwestern Vermont. The 56.7-mi 2 drainage area is in a predominantly rural and forested basin with some pasture on the valley bottom. In the vicinity of the study site, the surface cover consists of pasture upstream of the bridge. Downstream of the bridge the surface cover consists of trees, shrubs, and grass. In the study area, Little Otter Creek has a meandering channel with a slope of approximately 0.007 ft/ft, an average channel top width of 86 ft and an average channel depth of 3 ft. The predominant channel bed materials are cobbles and gravel with a median grain size (D 50 ) of 54.9 mm (0.180 ft). The geomorphic assessment at the time of the Level I and Level II site visit on July 1, 1996, indicated that the reach was laterally unstable. The U.S. Route 7 crossing of Little Otter Creek is a 157-ft-long, two-lane bridge consisting of three steel-beam spans (Vermont Agency of Transportation, written communication, December 12, 1995). The bridge is supported by vertical, concrete abutment walls with spill-through embankments in front of each abutment wall and two solid concrete piers. The channel is skewed approximately 15 degrees to the opening while the opening-skew-to-roadway is zero degrees. The scour protection measures at the site consist of type-3 stone fill (less than 48 inches diameter) on the banks upstream and downstream of the bridge and the lower half of the spill-through embankment slopes on each abutment. Type-1 stone fill (less than 12 inches diameter) protects the upper half of the spill-through embankments and each roadway embankment. Additional details describing conditions at the site are included in the Level II Summary and Appendices D and E. Scour depths and rock rip-rap sizes were computed using the general guidelines described in Hydraulic Engineering Circular 18 (Richardson and others, 1995). Total scour at a highway crossing is comprised of three components: 1) long-term streambed degradation; 2) contraction scour (due to accelerated flow caused by a reduction in flow area at a bridge) and; 3) local scour (caused by accelerated flow around piers and abutments). Total scour is the sum of the three components. Equations are available to compute depths for contraction and local scour and a summary of the results of these computations follows. Contraction scour for all modelled flows ranged from 1.8 to 2.3 ft. The worst-case contraction scour occurred at the 500-year discharge. Abutment scour ranged from 10.4 to 14.9 ft. The worst-case abutment scour occurred at the 500-year discharge. There are two piers for which computed pier scour ranged from 7.5 to 13.4 ft. The left and right piers in this report are presented as pier 1 and pier 2 respectively. The worst-case pier scour occurred at pier 1 for the 500-year discharge. Additional information on scour depths and depths to armoring are included in the section titled “Scour Results”. Scoured-streambed elevations, based on the calculated scour depths, are presented in tables 1 and 2. A cross-section of the scour computed at the bridge is presented in figure 8. Scour depths were calculated assuming an infinite depth of erosive material and a homogeneous particle-size distribution. It is generally accepted that the Froehlich equation (abutment scour) gives “excessively conservative estimates of scour depths” (Richardson and others, 1995, p. 47). Usually, computed scour depths are evaluated in combination with other information including (but not limited to) historical performance during flood events, the geomorphic stability assessment, existing scour protection measures, and the results of the hydraulic analyses. Therefore, scour depths adopted by VTAOT may differ from the computed values documented herein.

Vermont

Climate change and collapsing thermal niches of Mexican endemic reptiles

Recent climate change should result in expansion of species to northern or high elevation range margins, and contraction at southern and low elevation margins due to extinction. Climate models predict dramatic extinctions and distributional shifts in the next century, but there are few ground-truths of these dire forecasts leading to uncertainty in predicting extinctions due to climate change. Previously, we reported on recent extinctions of Mexican Sceloporus lizards by comparing recent surveys to historical distributional records for 48 species at 200 sites. We also ground-truthed extinctions on five continents across 8 lizard families by comparing observed and predicted extinctions from an eco-physiological species distribution model and obtained a high R 2 of 0.72 (1, 2). Here, we derive more detailed predictions for 15 terrestrial reptile families and 142 species for the Mexican and California Biogeographic provinces using all known museum occurrence records, and detailed measures on eco-physiology. We adopt the eco-physiological model of extinction developed earlier but use a species-specific model. We predict massive and rapid extinctions of 22% of the reptile populations in Mexico within the next 50 years. We also predict that 3 of 15 reptile families, all three endemic to the Mexican and Californian biogeographic provinces, will go extinct by 2070, the hallmark of the beginnings of a mass extinction event. However, extinctions may be attenuated by forest cover and by presence of montane environments in contemporary ranges. We describe impacts of altitude on three species (Gopherus morafkai, G. evgoodei, and Gambelia sila) to illustrate regional management strategies (AZ-Mexico, Sinoloa, CA) for reserves in tandem with global strategies of CO2 limits that might limit climate impacts. By carefully selecting new montane preserves adjacent to desert and tropical forest habitats, and by implementing global controls on atmospheric CO2 emissions, extinctions may be reduced to less than 11% of species and only a single reptile family.

Report