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Biological and ecological science for Montana—The Treasure State

Montana is rich in minerals, energy, and soils, as well as prairies, forests, mountains, rivers, lakes, fish, and wildlife. Many enterprises that drive the economy are based on natural resources, including tourism, hunting, fishing, agriculture, and energy development. The outdoor-recreation economy alone supports 64,000 Montana jobs and generates nearly \$6 billion each year in economic activity.

Montana

The Fort Collins Science Center

With a focus on biological research, the U.S. Geological Survey Fort Collins Science Center (FORT) develops and disseminates science-based information and tools to support natural resource decision-making. This brochure succinctly describes the integrated science capabilities, products, and services that the FORT science community offers across the disciplines of aquatic systems, ecosystem dynamics, information science, invasive species science, policy analysis and social science assistance, and trust species and habitats.

Colorado

Annotated bibliography of scientific research on greater sage-grouse published from 2015 to 2019

The greater sage-grouse ( Centrocercus urophasianus ; hereafter GRSG) has been a focus of scientific investigation and management action for the past two decades. The 2015 U.S. Fish and Wildlife Service listing determination of “not warranted” was in part due to a large-scale collaborative effort to develop strategies to conserve GRSG populations and their habitat and to reduce threats to both. New scientific information augments existing knowledge and can help inform updates or modifications to existing plans for managing GRSG and sagebrush ecosystems. However, the sheer number of scientific publications can be a challenge for managers tasked with evaluating and determining the need for potential updates to existing planning documents. To assist in this process, the U.S. Geological Survey (USGS) has reviewed and summarized the scientific literature published since January 1, 2015. The first GRSG literature summary was published early in 2018. Here we provide an update to that document by adding summaries of articles published between January 6, 2018 and October 2, 2019. To identify articles and reports published about GRSG, we first conducted a structured search of three reference databases (Web of Science, Scopus, and Google Scholar) using the search term “greater sage-grouse.” We refined the initial list of products by (1) removing duplicates, (2) excluding products that were not published as research or scientific review articles in peer-reviewed journals or as formal technical reports, and (3) retaining only those products for which GRSG or their habitat was a research focus. We summarized the contents of each product by using a consistent structure (background, objectives, methods, location, findings, and implications) and assessed the content of each product relevant to a list of 31 management topics. These topics include GRSG biology and habitat characteristics along with potential management actions, land uses, and environmental factors related to GRSG management and conservation. We also noted which articles/reports created new geospatial data. Our original search, conducted on January 7, 2018, and the application of our criteria, resulted in the inclusion of 169 published products (2 of these products were published corrections to journal articles). This update adds summaries of 69 products published between then and October 2, 2019. The management topics most commonly addressed were GRSG behavior or demographics and GRSG habitat selection or habitat characteristics at broad or site scales. Few products addressed captive breeding, recreation, wild horses and burros, and range management structures (including fences). The management topics with the largest increase in representation between the 2018 GRSG literature summary and this update were GRSG survival and GRSG population estimates or targets, which were each addressed in 16 percent of products in the original literature summary document, but were addressed in 30 and 33 percent, respectively, of newly summarized products. Topics with the largest declines in representation were conifer expansion, - 17 to 10 percent, and new geospatial data, -31 to 21 percent. We include in this annotated bibliography the full citation, Digital Object Identifier (DOI), product summary, and management topics addressed by each product. The online version of this bibliography (https://apps.usgs.gov/gsgbib/index.php) is searchable by topic and location and includes links to journal landing pages for each original publication. A substantial body of literature has been compiled on research explicitly related to the conservation, management, monitoring, and assessment of GRSG. These studies may inform planning and management actions that seek to balance conservation, economic, and social objectives and manage diverse resource uses and values across the western United States. The review process for this product included requesting input on each summary from one or more authors of the original peer-reviewed article or report and a formal review of the entire document by three independent reviewers for the original document and by two independent reviewers for the updated document and, subsequently, the USGS Bureau Approving Official. This process is consistent with USGS Fundamental Science Practices.

Arizona, California, Colorado, Idaho, Kansas, Mont

USGS Workshop on Scientific Aspects of a Long-Term Experimental Plan for Glen Canyon Dam, April 10-11, 2007, Flagstaff, Arizona

Executive Summary Glen Canyon Dam is located in the lower reaches of Glen Canyon National Recreation Area on the Colorado River, approximately 15 miles upriver from Grand Canyon National Park (fig. 1). In 1992, Congress passed and the President signed into law the Grand Canyon Protection Act (GCPA; title XVIII, sec. 1801?1809, of Public Law 102-575), which seeks ?to protect, mitigate adverse impacts to, and improve the values for which Grand Canyon National Park and Glen Canyon National Recreation Area were established.? The Glen Canyon Dam Adaptive Management Program (GCDAMP) was implemented as a result of the 1996 Record of Decision on the Operation of Glen Canyon Dam Final Environmental Impact Statement to ensure that the primary mandate of the GCPA is met through advances in information and resources management (U.S. Department of the Interior, 1995). On November 3, 2006, the Bureau of Reclamation (Reclamation) announced it would develop a long-term experimental plan environmental impact statement (LTEP EIS) for operational activities at Glen Canyon Dam and other management actions on the Colorado River. The purpose of the long-term experimental plan is twofold: (1) to increase the scientific understanding of the ecosystem and (2) to improve and protect important downstream resources. The proposed plan would implement a structured, longterm program of experimentation to include dam operations, potential modifications to Glen Canyon Dam intake structures, and other management actions such as removal of nonnative fish species. The development of the long-term experimental plan continues efforts begun by the GCDAMP to protect resources downstream of Glen Canyon Dam, including Grand Canyon, through adaptive management and scientific experimentation. The LTEP EIS will rely on the extensive scientific studies that have been undertaken as part of the adaptive management program by the U.S. Geological Survey?s (USGS) Grand Canyon Monitoring and Research Center (GCMRC), one of the four research stations within the USGS Southwest Biological Science Center. On April 10 and 11, 2007, at the behest of Reclamation, the GCMRC convened a workshop with scientific experts to identify one or more scientifically credible, long-term experimental options for Reclamation to consider for the LTEP EIS that would be consistent with the purpose and need for the plan. Workshop participants included government, academic, and private scientists with broad experience in the Colorado River in Grand Canyon and regulated rivers around the world. Resource managers and GCDAMP participants were also present on the second day of the workshop. In advance of the workshop, Reclamation and LTEP EIS cooperating agencies identified 14 core scientific questions. Workshop participants were asked to consider how proposed options would address these questions, which fall primarily into four areas: (1) conservation of endangered humpback chub (Gila cypha) and other high-priority biological resources, (2) conservation of sediment resources, (3) enhancement of recreational resources, and (4) preservation of cultural resources. A secondary objective of the workshop was the evaluation of four long-term experimental options developed by the GCDAMP Science Planning Group (SPG) (appendix B). The flow and nonflow treatments called for in the four experimental options were an important starting point for workshop discussions. At the beginning of the workshop, participants were provided with the final LTEP EIS scoping report prepared by Reclamation. Participants were also advised that Reclamation had committed to ?make every effortEto ensure that a new population of humpback chub is established in the mainstem or one or more of the tributaries within Grand Canyon? in the 1995 Operation of Glen Canyon Dam Final Environmental Impact Statement (U.S. Department of the Interior, 1995). This decision was consistent with the U.S. Fish and Wildlife Service?s 1995 bi

Open-File Report

National Research Program of the Water Resources Division, U.S. Geological Survey: Fiscal Year 1988

The National Research Program (NRP) of the US Geological Survey 's Water Resources Division (WRD) had its beginnings in the late 1950 's when ' core research ' was added as a line item to the Congressional budget. Since that time, the NRP has grown to encompass a broad spectrum of scientific investigations. The sciences of hydrology, mathematics, chemistry, physics, ecology, biology, geology, and engineering are used to gain a fundamental understanding of the processes that affect the availability, movement, and quality of the Nation 's water resources. The NRP is located principally in Reston, VA, Denver, CO, and Menlo Park , CA. The NRP is subdivided into six disciplines as follows: (1) Ecology; (2) Geomorphology and Sediment Transport; (3) Groundwater Chemistry; (4) Groundwater Hydrology; (5) Surface Water Chemistry; and (6) Surface Water Hydrology. The report provides current information about the NRP on an annual basis. Organized by the six research disciplines, the volume contains a summary of the problem, objective, approach, and progress for each project that was active during fiscal year 1988.

Open-File Report

Utah Science Activities, Update 2010

The U.S. Geological Survey (USGS), a bureau of the U.S. Department of the Interior, serves the Nation by providing reliable scientific information to describe and understand the Earth; minimize loss of life and property from natural disasters; manage water, biological, energy, and mineral resources; and enhance and protect our quality of life. The USGS has become a world leader in the natural sciences thanks to our scientific excellence and responsiveness to society's needs. This newsletter describes some of the current and recently completed USGS earth-science activities in Utah. As an unbiased, multi-disciplinary science organization that focuses on biology, geography, geology, and water, we are dedicated to the timely, relevant, and impartial study of the landscape, our natural resources, and the natural hazards that threaten us. Learn more about our goals and priorities for the coming decade in the USGS Science Strategy at http://www.usgs.gov/science_strategy/ .

General Information Product

Biological and geochemical data along Indian Point, Vermilion Bay, Louisiana

Scientists from the U.S. Geological Survey, St. Petersburg Coastal and Marine Science Center collected shallow sediment cores and surface samples from a coastal salt marsh environment next to Vermilion Bay in southwest Louisiana in January 2013. The sampling was part of a larger USGS study to gather data for assessing environmental changes over the past 150 years. The objective of the study was to expand upon the historical context of sea level and storms affecting coastal systems and how these systems might change under persistent or varying conditions. The data from this report add to a regional environmental change database that aids with the continuing effort to understand the evolution of coastal systems. This report serves as an archive for sedimentological, radiochemical, and microbiological data derived from the sediment cores. Data are available for January 2013. Downloadable data are available as Excel spreadsheets and as JPEG files. Additional files include ArcGIS shapefiles of the sampling sites, detailed results of sediment analyses, and formal Federal Geographic Data Committee metadata. Acknowledgments The authors thank Nancy DeWitt, B.J. Reynolds, Christopher Reich (USGS, St. Petersburg Coastal and Marine Science Center), for help with sample collection and processing; Michael Ball, Sarai Piazza, and Gregory Steyer (USGS, Coastal Restoration Assessment Branch) for assistance accessing CRMS Site 541; and Darrell Anders and Phillip Turnipseed (USGS National Wetlands Research Center) for technical support while in the field. We would also like to thank Caitlyn Reynolds and Nicholas Zaremba for their pre-release commentary and peer review. Information Statement This publication was prepared by an agency of the United States Government. Although these data were processed successfully on a computer system at the U.S. Geological Survey, no warranty expressed or implied is made regarding the display or utility of the data on any other system, or for general or scientific purposes, nor shall the act of distribution imply any such warranty. The U.S. Geological Survey shall not be held liable for improper or incorrect use of the data described and (or) contained herein. Reference herein to any specific commercial product, process, or service by trade name, trademark, manufacturer, or otherwise does not constitute or imply its endorsement, recommendation, or favoring by the United States Government or any agency

Louisiana

Understanding ecosystem services adoption by natural resource managers and research ecologists

The ecosystem services (ES) paradigm has gained much traction as a natural resource management approach due to its comprehensive nature and ability to provide quantitative tools to improve decision-making. However, it is still uncertain whether and how practitioners have adopted the ES paradigm into their work and how this aligns with resource management information needs. To address this, we surveyed natural resource managers within the Great Lakes region about their use of ES information in decision-making. We complemented our manager survey with in-depth interviews of a related population—research ecologists at the U.S. Geological Survey Great Lakes Science Center. In this study, managers and ecologists almost unanimously agreed that ES were appropriate to consider in resource management. We also found high congruence between managers and ecologists in the ES considered most relevant to their work, with provision of habitat, recreation and tourism, biological control, and primary production being the ES ranked highly by both groups. However, a disconnect arose when research ecologists deemed the information they provide regarding ES as adequate for management needs, but managers disagreed. Furthermore, managers reported that they would use economic information about ES if they had access to that information. We believe this data deficiency could represent a gap in scientific coverage by ecologists, but it may also simply reflect an underrepresentation of ecological economists who can translate ecological knowledge of ES providers into economic information that many managers desired.

Journal of Great Lakes Research

History of the Fort Collins Science Center, U.S. Geological Survey

The U.S. Geological Survey’s Fort Collins Science Center ("the Center") has been a nucleus of research, technology development, and associated scientific activities within the Department of the Interior for more than 30 years. The Center’s historical activities are deeply rooted in federal biological resources research and its supporting disciplines, particularly as they relate to the needs of the U.S. Department of the Interior and its resource management agencies. The organizational framework and activities of the Center have changed and adapted over the years in response to shifts in the scientific issues and challenges facing the U.S. Department of the Interior and with the development of new strategies to meet these challenges. Thus, the history of the Center has been dynamic. The Center has been nested within the U.S. Geological Survey since 1996. From 1993 to 1996 the Center was a major unit of the National Biological Service (named the National Biological Survey at its inception). This was a period of great organizational flux. During that time the Center comprised multiple field stations and science functions that prior to 1993 had been scattered among the U.S. Bureau of Land Management, the U.S. Bureau of Reclamation, the National Park Service, and the U.S. Fish and Wildlife Service. In 1993, certain biological research components of these agencies were assigned to join with the National Ecology Research Center, formerly one of the major research and development hubs of the U.S. Fish and Wildlife Service. This was the year when biological resources research in the U.S. Department of the Interior was consolidated by the Secretary of the Interior, who in an April 1993 memo explaining his intentions wrote, "Our Department has, without doubt, the best biologists in the world." Soon after formation of the new agency, the Center was re-named the Midcontinent Ecological Science Center, reflecting its geographic location within the new Midcontinent administrative region of the National Biological Service (the other three original administrative regions were the eastern, western, and southern). The change in name to the Fort Collins Science Center took place in 2002, soon after the center moved to new facilities on the Colorado State University Natural Resources Research Campus. At various times during the period when it was part of the National Biological Service (1993–96), the Center served as the administrative and programmatic home base for a wide number of science activities in numerous Western states (table 1). This reflected the previous fragmentation of biological and related science efforts across resource management agencies in the U.S. Department of the Interior. The organization of the 2 Center within the National Biological Service was a manifestation of the desire of the Secretary of the Interior to consolidate its biological science activities in administratively independent entities that would ensure that the science retained its objectivity. Congress later recognized the need to maintain a hierarchical independence between biological science and resource management in the Department. However, Congress also saw that the U.S. Geological Survey, with its long history of objective science support to the nation in geology, water resources, geography, and remote sensing, was a suitable alternative home for these biological science functions. Thus, in 1996 Congress transferred the biological resources functions of the National Biological Service to the U.S. Geological Survey. Detailed overviews and opinions about the history and policy issues surrounding the formation and subsequent fate of the National Biological Service can be found elsewhere (for example Cohn, 1993, 2005; Kaufman, 1993; Kreeger, 1994; Pulliam, 1995, 1998a,b; Reichhardt, 1994; Wagner, 1999)

Open-File Report

Methods used to characterize the chemical composition and biological activity of environmental waters throughout the United States, 2012-14

A vast array of chemical compounds are in wide commercial use in the United States, and the potential ecological and human-health effect of exposure to chemical mixtures has been identified as a high priority in environment health science. Awareness of the potential effects of low-level chemical exposures is rising. The U.S. Geological Survey, in cooperation with the U.S. Environmental Protection Agency, conducted a study in which samples were collected from 38 streams in 25 States to provide an overview of contaminants found in stream water across the Nation. Additionally, biological screening assays were used to help determine any potential ecological and human-health effects of these chemical mixtures and to prioritize target chemicals for future toxicological studies. This report describes the site locations and the sampling and analytical methods and quality-assurance procedures used in the study.

Open-File Report

Decision context as an essential component of population viability analysis

Population viability analysis (PVA) is a widely used tool that applies demographic data in simulation frameworks to assess extinction risk for species or populations. It is used in diverse conservation applications, including evaluating management effectiveness, relative risk of threats, and potential changes to protective status (Beissinger & McCullough, 2002 ), and can be a critical tool for making decisions with imperfect knowledge of the system state, often on limited timelines (Meine et al., 2006 ). Chaudhary and Oli ( 2020 ) recently developed a framework to appraise the quality of PVAs based on the presence of essential background, model, and analysis components. They evaluated 160 published PVAs and reported a decline in the quality of PVAs over time (1990−2017). We agree PVA studies should report unambiguous descriptions of their essential components (Table 1 in Chaudhary and Oli) and explicitly state the model's biological and statistical assumptions. The need for increased transparency in PVAs is evident. Morrison et al. ( 2016 ) reported that only 50% of PVAs published in peer-reviewed and gray literature were both reproducible and repeatable. Further, in an examination of 67 studies that used matrix population models (widely used in PVAs), Kendall et al. ( 2019 ) reported that models frequently contained misspecification errors. Given the rapid advancement of simulation techniques, updated guidance for PVA construction is warranted. However, we believe the essential PVA components identified by Chaudhary and Oli contain a critical omission: the decision context in which the PVA was created and its usefulness in that context. Quality and utility are not mutually exclusive; however, some models that do not meet idealized quality standards might still be valuable because they are useful and represent the best available science for a given decision context (hereafter, decision-support models). The definition of quality for decision-support models should be different than models developed for the purpose of learning (hereafter, heuristic models) and should incorporate how useful the model was, despite information gaps. We further argue that assessment questions should be used prospectively to guide modeling projects, rather than for retrospective comparison of model quality.

Conservation Biology

Volume V: Bulletin of the United States Geological and Geographical Survey of the Territories, 1879

The object of the present paper is to set forth some interesting biological facts relating to the gall-making Pemphiginre, and which were presented in abstract at the late meeting of the American Association for the Advancement of Science. These facts have a special interest just at this time on account of the close relation·ship between the insects of the sub-family in question and the notorious Grape-vine Phylloxera (Phylloxera vastatrix).

Report

U.S. Geological Survey, National Wildlife Health Center, 2011 report of selected wildlife diseases

The National Wildlife Health Center (NWHC) was founded in 1975 to provide technical assistance in identifying, controlling, and preventing wildlife losses from diseases, conduct research to understand the impact of diseases on wildlife populations, and devise methods to more effectively manage these disease threats. The impetus behind the creation of the NWHC was, in part, the catastrophic loss of tens of thousands of waterfowl as a result of an outbreak of duck plague at the Lake Andes National Wildlife Refuge in South Dakota during January 1973. In 1996, the NWHC, along with other Department of Interior research functions, was transferred from the U.S. Fish and Wildlife Service to the U.S. Geological Survey (USGS), where we remain one of many entities that provide the independent science that forms the bases of the sound management of the Nation’s natural resources. Our mission is to provide national leadership to safeguard wildlife and ecosystem health through dynamic partnerships and exceptional science. The main campus of the NWHC is located in Madison, Wis., where we maintain biological safety level 3 (BSL–3) diagnostic and research facilities purposefully designed for work with wildlife species. The NWHC provides research and technical assistance on wildlife health issues to State, Federal, and international agencies. In addition, since 1992 we have maintained a field station in Hawaii, the Honolulu Field Station, which focuses on marine and terrestrial natural resources throughout the Pacific region. The NWHC conducts diagnostic investigations of unusual wildlife morbidity and mortality events nationwide to detect the presence of wildlife pathogens and determine the cause of death. This is also an important activity for detecting new, emerging and resurging diseases. The NWHC provides this crucial information on the presence of wildlife diseases to wildlife managers to support sound management decisions. The data and information generated also allows for further indepth analyses for determining the biological and ecological significance of disease events, detecting disease trends over time and space, as well as detecting any significant changes to how diseases manifest in the field. Moreover, this information allows us to gain insight into the significance of future wildlife disease events. The purpose of this report is to provide a sample of NWHC data that are available from our Laboratory Information Management System (LIMS). These data are presented in summary format with minimal statistical analysis and interpretation. The goal is to share these data with wildlife managers and other stakeholders, promote the use of NHWC data, and encourage the sharing of wildlife disease data to improve temporal and geographic surveillance coverage. Continued national surveillance for wildlife diseases is essential for providing early detection and warning of events that have the potential to result in harm to human health, economic losses, declines in wildlife populations, and subsequent ecological disturbances. Increased collaboration, coordination, and sharing of surveillance data will enhance this Nation’s ability to detect and respond to wildlife disease threats.

Scientific Investigations Report

Ecological requirements for pallid sturgeon reproduction and recruitment in the Missouri River—A synthesis of science, 2005 to 2012

This report is intended to synthesize the state of the scientific understanding of pallid sturgeon ecological requirements to provide recommendations for future science directions and context for Missouri River restoration and management decisions. Recruitment of pallid sturgeon has been low to non-existent throughout its range. Emerging understanding of the genetic structure of pallid sturgeon populations sets a broad framework for species and river management decisions, including decisions about managing the future genetic diversity of the species, but also decisions about where and what type of river restoration actions will be effective for subpopulations of this highly migratory species. Adult pallid sturgeon may migrate hundreds of kilometers (km) to spawn and their progeny may disperse even greater distances downstream as drifting free embryos. As a result of their complex life history pallid sturgeon naturally exploit a wide range of habitats during their life cycles. The construction of dams and reservoirs has fragmented habitats and may have shifted Missouri River subpopulations downstream. Research has not identified one primary biological or ecological constraint that appears to limit populations of the pallid sturgeon. With the present (2013) state of knowledge many life stages and life-stage transitions cannot be ruled out as contributing to recruitment failure. Biological opinions in 2000 (and amended in 2003) presented the dominant hypotheses for recruitment failure that existed at that time. Emphasis was on the role of the flow regime, specifically spring flow pulses (“spring rises”), to condition spawning substrate and cue reproductive aggregations and migrations, and on low flows and additional slow, shallow-water area to serve as rearing habitat for age-0 to juvenile pallid sturgeon. Studies on spawning habitat dynamics have documented that habitat patches selected for spawning by fish in the Lower Missouri River (Missouri River downstream from Gavins Point Dam to the confluence with the Mississippi River) are dominantly on outside, revetted bends in the deepest, fastest, and most turbulent water. Studies in more natural habitat on the Yellowstone River have documented spawning in convergent flow in the middle of the channel on discrete patches of gravel within a sand-dominated channel, an arrangement that may be more effective in attracting aggregations of reproductive fish compared to the nearly continuous revetment on the Lower Missouri River. Pallid sturgeon spawn in the spring and early summer during periods of increasing day length. Water temperature consistently exerts a threshold effect for spawning at 16–18 °C. In addition, the role of water temperature is indicated by pauses and reversals in upstream migrations that have been associated with cold weather fronts that create a transient decrease in water temperature. From 2005 to 2012 on the Lower Missouri River, no obvious relations between flow pulses and fish movements and spawning behaviors have been apparent. However, pallid sturgeon tracking at the Upper Missouri–Yellowstone confluence indicates that in most years, most telemetered pallid sturgeon migrate out of the Missouri River and into the Yellowstone River in the June–July timeframe in association with the spring pulse. This pattern was disrupted in 2011 when a high flow pulse with warm temperatures and high turbidity emanated from the Milk River, followed by record releases from Fort Peck Dam, and 36–39 percent of the telemetered population migrated up the Upper Missouri. This result supports the hypothesis that sufficiently large flow pulses may trigger migration and aggregation but it is not clear that functional pulses are within reservoir management authorities. Notably, a pallid sturgeon free embryo was captured on the Upper Missouri River in 2011 and another single, genetically confirmed embryo was captured on the Yellowstone River in 2012. Research on free-embryo drift has indicated the potential for hundreds of miles of downstream dispersal. Lack of distance to accommodate the extended downstream dispersal period of free embryos on the Upper Missouri and Yellowstone Rivers is the predominant hypothesis for recruitment failure in the upper basin. Long drift distances in the Lower Missouri River may be responsible for shifting Lower Missouri River sub-populations further into the Middle Mississippi River. Physical understanding of drift processes indicates that mean velocities could be slowed through decreased discharges or increased channel hydraulic radius (width and topographic diversity) to reduce free-embryo dispersal distances. In addition, the probability that free embryos are transported into and retained in channel-margin habitats is theoretically amenable to channel re-engineering that would increase cross-channel secondary currents in bends or channel expansions. Considerable uncertainty persists, however, about whether extended drift of Lower Missouri River larvae is responsible for recruitment failure. If drift distance is limiting, it is important to discern whether it would be advisable to retain larvae within the Missouri River, and where along the river restoration projects should be placed to optimize survival and growth of age-0 and juvenile sturgeon. Longitudinal differences in female pallid sturgeon fecundity lend support to the hypothesis that recruitment failure may be due, in part, to fish having insufficient nutrition to produce the numbers of gametes needed for the population to grow, perhaps because of simultaneous declines in prey-fish populations and their habitats. Establishing a chain of causality from habitat decline, to prey-fish populations, to sturgeon diets, to sturgeon fecundity, and to pallid sturgeon population growth presents a considerable scientific challenge. In addition to the dominant hypotheses relating pallid sturgeon populations to changes in flow regime and channel morphology, other factors have been identified that might be sources of stress and contribute to recruitment failure. Among these are water quality and contaminants. Ambient water-quality monitoring on the Missouri River has demonstrated summer episodes when dissolved oxygen dips below 5 milligrams per liter, a threshold that may be stressful especially to age-0 and juvenile sturgeon. Documented cases of intersex in shovelnose and pallid sturgeon indicate that agricultural and municipal sources of endocrine disrupting chemicals also may have a role in pallid sturgeon recruitment failure. Scientific understanding of the ecological requirements of pallid sturgeon has increased almost exponentially in the last two decades, and efforts are now turning from understanding fundamental biology of the species to quantifying how population dynamics relate to potential management actions. Progress in developing the science needed to inform management actions on the Missouri River may benefit from continuation of monitoring of reproductive cycles, reproductive movements, growth, and survival of telemetry tagged adults, increased emphasis on focused, complementary field and laboratory studies of factors influencing early life history, implementation of studies to resolve the role of food limitations in growth, survival, and reproductive condition, and implementation of studies designed specifically to parameterize models linking management to populations.

Missouri River

Supporting the development and use of native plant materials for restoration on the Colorado Plateau (Fiscal Year 18 Report)

Introduction A primary focus of the Colorado Plateau Native Plant Program (CPNPP) is to identify and develop appropriate native plant materials (NPMs) for current and future restoration projects. Multiple efforts have characterized the myriad challenges inherent in providing appropriate seed resources to enable effective, widespread restoration and identified a broad suite of research activities to provide the information necessary to overcome those challenges (e.g., Plant Conservation Alliance 2015; Breed et al. 2018). Many of the most complex information needs relate to identifying the appropriate plant species and populations that can successfully establish in dryland environments, like the Colorado Plateau, where low and highly variable precipitation is standard. Providing this information requires synergistic research efforts in which results from earlier investigations inform the design of subsequent investigations. Southwest Biological Science Center’s (SBSC’s) research activities in FY18 followed the FY18 Statement of Work (“Research supporting native plant materials development for the Colorado Plateau Native Plant Program, FY18”) to support a research framework that is continually adapting based on the needs of the restoration community and results from previous investigations; the long-term research framework is now outlined in the 2019-2023 5-Year Research Strategy (discussed below; hereafter referred to as the 5-Year Research Strategy). This research framework provides support for the National Seed Strategy for Rehabilitation and Restoration (Plant Conservation Alliance, 2015), Department of Interior Secretarial Order #3347 (Conservation Stewardship and Outdoor Recreation), and Bureau of Land Management Leadership Priority #1 (Create a conservation stewardship legacy second only to Teddy Roosevelt). The overall focus of activities in FY18 centered on landscape genetics and planning for common garden and other research projects. These activities were supported by two biological technicians that were hired and trained by Dr. Rob Massatti and Dr. Daniel Winkler. Many of the field-related activities, including plant trait measurement and seed/tissue collecting, were assigned to these technicians, which freed Dr. Massatti to work on other research objectives, including the time-consuming activities of processing and analyzing genetic data. A major challenge to field work in FY18 was the drought conditions that pervaded the Plateau during the spring field season. Due to low winter and spring precipitation, many plant communities did not green up in the spring, which prevented the biological technicians from collecting plant trait data, tissues samples, and seeds in many areas. To cope with the dry conditions, the technicians searched sites across a wider range of environmental space and considered a broader suite of species from which to collect data (i.e., species that may be included in research projects in future years). Monsoonal precipitation starting in July supported a late summer/fall field season and allowed the technicians to follow a more normal work plan. While Dr. Massatti was the only scientist supported by the SBSC-CPNPP agreement in FY18, other scientists, including Drs. John Bradford, Seth Munson, Mike Duniway, Sasha Reed, Daniel Winkler, and Jayne Belnap, spent a considerable amount of time discussing individual projects and the newly developed 5-Year Research Strategy. Some of these discussions resulted in a publication by Dr. Winkler, in addition to a large group of researchers, practitioners, and others who work on the Colorado Plateau, concerning the restoration challenges facing the Plateau into the future and the types of efforts that may support successful restoration (Winkler et al., 2018).

Colorado

Interim report on the scientific investigations in the Animas River watershed, Colorado to facilitate remediation decisions by the U.S. Bureau of Land Management and the U.S. Forest Service, March 29, 2000 meeting, Denver, Colo.

INTRODUCTION The joint U.S. Department of the Interior and U.S. Department of Agriculture Abandoned Mine Lands Initiative (AMLI) was developed as a collaborative effort between the Federal land management agencies (FLMA, that is the U.S. Bureau of Land Management and the U.S. Forest Service) and the U.S. Geological Survey (USGS) in 1996. The stated goal of the AML Initiative was to develop a strategy for gathering and communicating the scientific information needed to develop effective and cost-efficient remediation of abandoned mines within the framework of a watershed. Four primary objectives of the AMLI are to: 1. Provide the scientific information needed (in the short-term) by the FLMAs to make decisions related to the design and implementation of cleanup actions, 2. Develop a multi-disciplined, multi-division approach that integrates geologic, hydrologic, geochemical and ecological information into a knowledge base for sound decision making, 3. Transfer technologies developed within the scientific programs of the USGS to the field and demonstrate their suitability to solve real, practical problems, and 4. Establish working relationships among involved members of land management and regulatory agencies within the framework of a watershed approach to the cleanup of abandoned mines. Long-term process-based research, including development of analytical tools, is recognized as being critical to the long-term success in remediating watersheds impacted by historical mining activities (AML 5-year plan, http://amli.usgs.gov/amli). In a meeting of Federal agencies (U.S. Bureau of Land Management [BLM], U.S. Bureau of Reclamation [BOR], U.S. National Park Service [NPS], U.S. Forest Service [USFS], the U.S. Environmental Protection Agency [EPA], the U.S. Fish and Wildlife Service [F&WS]), and State agencies (Colorado Division of Public Health and Environment, Colorado Division of Mines and Geology), several watersheds were examined within the state whose water quality was presumed to be impacted by historical mining activities. The Animas River watershed (fig. 1) was selected by the State and Federal agencies as one of two watersheds in the U.S. to be studied in detail by the USGS in the AML Initiative. Beginning in October 1997, each of the four Divisions of the USGS (Water Resources, Geologic, Biological Resources, and National Mapping) initiated a collaborative integrated science study of the watershed. Funds were provided from USGS base funding to each of the four Divisions in response to the priorities set by Congressional action and within the flexibility provided by the budgetary framework funding individual research programs. The AML Initiative provides for a five-year focused scientific effort in the two watersheds with final synthesis of the scientific results from each to be published in 2001. Publications are released on the AML web site on a regular basis (http://amli.usgs.gov/amli). On March 29, 2000, the USGS hosted a meeting for the BLM and USFS to discuss remediation options that were under consideration for the summer of 2000. The purpose of this report is to provide an overview of the scientific rational provided by the USGS to meet objective one above, and to summarize our preliminary interpretations of our data. Additional information from sites on private lands have been collected by the State of Colorado, EPA, and the ARSG. Unfortunately, these data have not been fully supplied to the USGS so our conclusions are based only upon our data. These interpretations provide science-based constraints on possible remediation options to be considered by the FLMA, the State, and local property owners in the Animas River watershed. The report is presented in outline format to facilitate discussion of remediation options at the March 29, 2000 meeting. Not all historical mining sites within the watershed are on public lands. This should not be construed to be a final report of the USGS

Denver

Biology in focus: better lives through better science: new hope for acid streams

Across the nation, a toxic pollutant turns clean streams orange, kills fish and plant life, and smells like rotten eggs. The culprit is acid mine drainage, the poisonous water leaking from more than 500,000 abandoned and inactive mines in 32 states. The toxic discharge is a problem for operational mines as well. In the Appalachian coal region, for example, acid mine drainage has degraded more than 8,000 miles of streams and has left some aquatic habitats virtually lifeless.

Fact Sheet

Climate variation and its effects on our land and water : Part A, Earth science in climate research

To better coordinate information being generated by the U.S. Geological Survey, a workshop was convened near Denver, Colo., on December 7-9, 1976, to exchange ideas about research that is oriented toward climate, climate variation, and the effects of climate on the Nation 's land and water resources. This is the first circular of a three-part report resulting from that workshop. Hydrologic records provide information to the earth scientist about the responses of ground water, surface water, and glaciers to climatic change; geologic sequences provide evidence of earth-surface water, and glaciers to climatic change; geologic sequences provide evidence of earth-surface responses to climatic change; biological records yield information about the effects of climatic change on the Earth 's biota; archeological records tell us where and how man was able to live under changing climatic conditions; and historical records allow the specific effects of short-term changes in climate to be accurately documented. The interrelation between present and past geologic environments, various methods of study , and the span of time over which the results can be applied are shown in a table. (Woodard-USGS)

Circular