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USGS2005

Performance of four turbulence closure models implemented using a generic length scale method

A two-equation turbulence model (one equation for turbulence kinetic energy and a second for a generic turbulence length-scale quantity) proposed by Umlauf and Burchard [J. Marine Research 61 (2003) 235] is implemented in a three-dimensional oceanographic model (Regional Oceanographic Modeling System; ROMS v2.0). These two equations, along with several stability functions, can represent many popular turbulence closures, including the k-kl (Mellor-Yamada Level 2.5), k-??, and k-?? schemes. The implementation adds flexibility to the model by providing an unprecedented range of turbulence closure selections in a single 3D oceanographic model and allows comparison and evaluation of turbulence models in an otherwise identical numerical environment. This also allows evaluation of the effect of turbulence models on other processes such as suspended-sediment distribution or ecological processes. Performance of the turbulence models and sediment-transport schemes is investigated with three test cases for (1) steady barotropic flow in a rectangular channel, (2) wind-induced surface mixed-layer deepening in a stratified fluid, and (3) oscillatory stratified pressure-gradient driven flow (estuarine circulation) in a rectangular channel. Results from k-??, k-??, and gen (a new closure proposed by Umlauf and Burchard [J. Marine Research 61 (2003) 235]) are very similar for these cases, but the k-kl closure results depend on a wall-proximity function that must be chosen to suit the flow. Greater variations appear in simulations of suspended-sediment concentrations than in salinity simulations because the transport of suspended-sediment amplifies minor variations in the methods. The amplification is caused by the added physics of a vertical settling rate, bottom stress dependent resuspension, and diffusive transport of sediment in regions of well mixed salt and temperature. Despite the amplified sensitivity of sediment to turbulence models in the estuary test case, the four closures investigated here all generated estuarine turbidity maxima that were similar in their shape, location, and concentrations.

Ocean Modelling↗

USGS2017

Historical changes in organic matter input to the muddy sediments along the Zhejiang-Fujian Coast, China over the past 160 years

The burial of sedimentary organic matter (SOM) in the large river-influenced estuarine-coastal regions is affected by hydrodynamic sorting, diagenesis and human activities. Typically, the inner shelf region of the East China Sea is a major carbon sink of the Yangtze River-derived fine-grained sediments. Most of the previous work concentrated on the studies of surface sediments or used a single-proxy in this region. In this study, two cores from the Zhejiang-Fujian Coast were analyzed using bulk (TOC, TN and δ 13 C TOC ) and molecular biomarker ( n -alkane, brassicasterol, dinosterol and glycerol dialkyl glycerol tetraether lipids) techniques to clarify the sources, spatiotemporal distribution and fate of SOM in the Yangtze River Estuary and adjacent shelf. Results from this study indicated that the effects of diagenesis and diffusion on different sedimentary biomarkers resulted in overestimation of the relative contribution of terrestrial organic matter (%OM terr ), compared with those based on δ 13 C TOC . The amounts of terrestrial plant organic matter (OM plant ) and%OM terr in sediments decreased offshore. In contrast, the amounts of marine organic matter (OM marine ) increased offshore, but closer to the Yangtze River mouth, the amounts of soil organic matter (OM soil ) increased. Moreover, the amounts of TOC, OM plant and OM marine biomarkers increased, but OM soil and%OM terr decreased over time in recent decades. Our study suggests that spatial organic matter distribution patterns in marine shelf sediments were controlled primarily by hydrodynamic sorting and nutrient concentrations, and temporally diverse patterns were controlled predominantly by anthropogenic influence (e.g., dam construction and soil conservation, reclamation and agricultural plantations, anthropogenic nutrient input, dust storms, eutrophication, etc) and climate events (e.g., interdecadal climatic jump and heavy rain events) in the geological period.

Zhejiang-Fujian Coast↗

USGS2018

Evidence for major input of riverine organic matter into the ocean

The changes in the structure of XAD-8 isolated dissolved organic matter (DOM) samples along a river (Penobscot River) to estuary (Penobscot Bay) to ocean (across the Gulf of Maine) transect and from the Pacific Ocean were investigated using selective and two dimensional (2D) nuclear magnetic resonance (NMR) spectroscopy coupled with elemental and carbon isotope analysis. The results provide important insights into the nature of relatively stable structures in the river-to-ocean continuum and the enigma of the fate of terrestrial DOM in the marine system. First, lignin and carboxyl-rich alicyclic molecules (CRAMs), which are indistinguishable from mass spectrometry, were clearly differentiated with NMR spectroscopy. NMR unambiguously showed that CRAMs persisted along the river-to-ocean transect and in the Pacific Ocean, while lignin residues dramatically decreased in abundance from the river to the coastal ocean and the Pacific Ocean. The results challenge a previous conclusion that lignin-derived compounds are refractory and can accumulate in the coastal ocean. The loss of terrestrial plant-derived aromatic compounds such as lignin and tannin residues throughout the sequence of riverine, coastal, and open ocean DOM extracts could also partially explain the decreasing organic carbon recovery by XAD-8 isolation and the change in carbon stable isotope composition from riverine DOM (δ 13 C −27.6‰) to ocean DOM (δ 13 C −23.0‰) extracts. The observation, from advanced NMR, of similar CRAM molecules in XAD-8 isolated DOM samples from the Penobscot River to the Penobscot Bay and from the ocean refutes a previous conclusion that XAD-isolated DOM samples from seawater and river are distinctly different. The alicyclic structural features of CRAMs and their presence as the major structural units in DOM extracts from the Penobscot River to Gulf of Maine transect, together with the deduced old 14 C age of CRAMs in the ocean, imply that terrestrial CRAMs may persist on timescales long enough to be transported into the ocean.

Organic Geochemistry↗

USGS2008

Micropaleontologic record of late Pliocene and Quaternary paleoenvironments in the northern Albemarle Embayment, North Carolina, U.S.A.

Micropaleontological data provide a strong actualistic basis for detailed interpretations of Quaternary paleoenvironmental change. The 90 m-thick Quaternary record of the Albemarle Embayment in the mid-Atlantic coastal plain of the USA provides an excellent opportunity to use such an approach in a region where the details of Quaternary environmental change are poorly known. The foraminiferal record in nine cores from the northern Outer Banks, east of Albemarle Sound, North Carolina, indicates the deposition of subhorizontal, mostly open-marine early to late Pleistocene units unconformably upon a basement of late Pliocene reduced-oxygen, fine-grained, shelf-basin deposits. Pollen data record several warm–cool fluctuations within the early to mid-Pleistocene deposits. Diatom data indicate that some fresh and brackish-water units occur within the generally open-marine Pleistocene succession. A channel cut by the paleo-Roanoke River during the last glacial sea-level lowstand occurs in the northern part of the study area. Pollen indicates that the basal fluvial valley fill accumulated in cooler than modern climate conditions in the latest Pleistocene. Overlying silts and muds accumulated under cool climatic, estuarine conditions according to diatom and pollen data. Radiocarbon ages from the estuarine deposits indicate that the bulk of these sediments accumulated during the latest Pleistocene. The estuarine channel-fill deposits are overlain by Holocene open-marine sands deposited as the rising sea transgressed into the estuary approximately 8.5 to 9.0 kyr BP. Within the barrier island drill cores of this study, fully marine sedimentation occurred throughout the Holocene. However, immediately west of the present barrier island, mid- to late Holocene estuarine deposits underlie the modern Albemarle Sound. The islands that currently form a continuous barrier across the mouth of Albemarle Sound have a complex history of Holocene construction and destruction and large portions of them may be less than 3 kyr old. The barrier island sands overlie open-marine sands of Colington Shoal in the north and to the south overlie fluvial and marine sand filling paleo-Roanoke tributary valleys. The Pleistocene sediments underlying the northern Outer Banks study area are mainly of open inner to mid-shelf origin. If, as is likely, sea level continues to rise, a return to such environmental conditions is likely in the near future.

North Carolina↗

USGS2011

Late Early Permian continental ichnofauna from Lake Kemp, north-central Texas, USA

Continental trace fossils of Early Permian age are well known in the western United States from Wolfcampian (~ Asselian to Artinskian) strata, but few examples are known from Leonardian (~ Kungurian) deposits. A substantial ichnofauna from strata of the lower part of the Clear Fork Formation at Lake Kemp, Baylor County, Texas, augments the meager North American record of Leonardian continental trace fossil assemblages. Ichnofossils at Lake Kemp occur in the informally-named Craddock dolomite member of the Clear Fork Formation, which is 12–15 m above the local base of the Clear Fork. The trace-bearing stratum is an up-to-0.3 m thick, laminated to flaser-bedded, dolomitic siltstone that also contains mud cracks, raindrop impressions, microbially induced mat structures, and some land-plant impressions. We interpret the Craddock dolomite member as the feather-edge of a marine transgressive carbonate deposit of an irregular coastline marked by shallow bays or estuaries on the eastern shelf of the Midland basin, and the trace-fossil-bearing stratum at Lake Kemp is an unchannelized flow deposit on a muddy coastal plain. The fossil site at Lake Kemp yields a low to moderately diverse fauna of invertebrate and vertebrate traces. A sparse invertebrate ichnofauna consists of arthropod feeding and locomotion traces assigned to Walpia cf. W. hermitensis White, 1929 and Diplichnites gouldi Gevers in Gevers et al., 1971. Tetrapod footprints are most common and assigned to Batrachichnus salamandroides (Geinitz, 1861), cf. Amphisauropus kablikae (Geinitz and Deichmüller, 1882), and Dromopus lacertoides (Geinitz, 1861), which represent small temnospondyl, seymouriamorph, and basal sauropsid trackmakers. Both the traces and sedimentary features of the fossil horizon indicate a freshwater setting at the time of track formation, and the trace assemblage represents the Scoyenia ichnofacies and the Batrachichnus ichnofacies in an overbank environment with sheet flooding and shallow ephemeral pools on an extensive coastal plain. The Lake Kemp tetrapod track assemblage is characteristic of the global Early Permian tetrapod ichnofauna found in red beds, which is dominated by a handful of ichnogenera that include Batrachichnus, Limnopus, Amphisauropus, Dromopus, Varanopus, Hyloidichnus, Ichniotherium and Dimetropus, which are the tracks of temnospondyls, seymouriamorphs, diadectomorphs, “pelycosaurs”, “captorhinomorphs”, and araeoscelids. The Lake Kemp tracks also further document the continuity of the ichnogenera Batrachichnus, Amphisauropus and Dromopus from Wolfcampian into Leonardian time and thus support the concept that Wolfcampian and Leonardian red-bed tetrapod footprints represent a single biostratigraphic assemblage.

Texas↗

USGS2011

Coastal subsidence in Oregon, USA during the giant Cascadia earthquake of AD 1700

Quantitative estimates of land-level change during the giant AD 1700 Cascadia earthquake along the Oregon coast are inferred from relative sea-level changes reconstructed from fossil foraminiferal assemblages preserved within the stratigraphic record. A transfer function, based upon a regional training set of modern sediment samples from Oregon estuaries, is calibrated to fossil assemblages in sequences of samples across buried peat-mud and peat-sand contacts marking the AD 1700 earthquake. Reconstructions of sample elevations with sample-specific errors estimate the amount of coastal subsidence during the earthquake at six sites along 400 km of coast. The elevation estimates are supported by lithological, carbon isotope, and faunal tidal zonation data. Coseismic subsidence at Nehalem River, Nestucca River, Salmon River, Alsea Bay, Siuslaw River and South Slough varies between 0.18 m and 0.85 m with errors between 0.18 m and 0.32 m. These subsidence estimates are more precise, consistent, and generally lower than previous semi-quantitative estimates. Following earlier comparisons of semi-quantitative subsidence estimates with elastic dislocation models of megathrust rupture during great earthquakes, our lower estimates for central and northern Oregon are consistent with modeled rates of strain accumulation and amounts of slip on the subduction megathrust, and thus, with a magnitude of 9 for the AD 1700 earthquake.

Oregon↗

USGS2016

Differences in coastal subsidence in southern Oregon (USA) during at least six prehistoric megathrust earthquakes

Stratigraphic, sedimentologic (including CT 3D X-ray tomography scans), foraminiferal, and radiocarbon analyses show that at least six of seven abrupt peat-to-mud contacts in cores from a tidal marsh at Talbot Creek (South Slough, Coos Bay), record sudden subsidence (relative sea-level rise) during great megathrust earthquakes at the Cascadia subduction zone. Data for one contact are insufficient to infer whether or not it records a great earthquake—it may also have formed through local, non-seismic, hydrographic processes. To estimate the amount of subsidence marked by each contact, we expanded a previous regional modern foraminiferal dataset to 174 samples from six Oregon estuaries. Using a transfer function derived from the new dataset, estimates of coseismic subsidence across the six earthquake contacts vary from 0.31 m to 0.75 m. Comparison of subsidence estimates for three contacts in adjacent cores shows within-site differences of ≤0.10 m, about half the ±0.22 m error, although some estimates may be minimums due to uncertain ecological preferences for Balticammina pseudomacrescens in brackish environments and almost monospecific assemblages of Miliammina fusca on tidal flats. We also account for the influence of taphonomic processes, such as infiltration of mud with mixed foraminiferal assemblages into peat, on subsidence estimates. Comparisons of our subsidence estimates with values for correlative contacts at other Oregon sites suggest that some of our estimates are minimums and that Cascadia's megathrust earthquake ruptures have been heterogeneous over the past 3500 years.

Oregon↗

USGS2020

Late Quaternary evolution and stratigraphic framework influence on coastal systems along the north-central Gulf of Mexico, USA

Coastal systems in the Gulf of Mexico are threatened by reduced sediment supply, storm impacts and relative sea-level rise (RSLR). The geologic record provides insight into geomorphic evolution thresholds to these forcing mechanisms to help predict future barrier evolution in response to climate change. This study synthesizes ∼2100 km of geophysical data, 700 + sediment cores, and 62 radiocarbon dates to regionally map two lowstand sequence boundaries, multiple ravinement surfaces and fourteen depositional facies demonstrating stratigraphic and antecedent topographic influences on coastal evolution. The Mississippi-Alabama (MSAL) barriers are anchored by a marine isotope stage (MIS) 5e section of Dauphin Island coupled with an MIS 2 surface gradient change. Sand for the modern MSAL barriers were largely sourced through Holocene transgressive ravinement of relict valley fill deposits, providing up to 300 × 106 m3 of sand. Mud-filled MIS 2 tributaries correspond to areas of repeated storm breaching or tidal inlets. A Holocene geomorphic evolutionary model was created for Petit Bois and Dauphin Islands, highlighting RSLR rates, changes in sediment supply and the antecedent geologic framework. As the MIS 2 surface was flooded, tidal/wave scour supplied sand to migrating marine shoals. These transgressing shoals converted drowned paleovalleys to estuaries ∼9ka BP. Islands formed in their modern positions ∼6ka BP, when sediment supply was high and RSLR rates were 2 mm/yr. Between ∼4ka-1750 CE, islands prograded from reduced RSLR rates of 1-0.4 mm/yr and sufficient sand supply from alongshore/inner shelf sources. Currently, the islands experience 3.74 mm/yr of RSLR and reduced sediment supply, resulting in barrier degradation.

Alabama, Mississippi↗

USGS2012

Potential pollutant sources in a Choptank River (USA) subwatershed and the influence of land use and watershed characteristics

Row-crop and poultry production have been implicated as sources of water pollution along the Choptank River, an estuary and tributary of the Chesapeake Bay. This study examined the effects of land use, subwatershed characteristics, and climatic conditions on the water quality parameters of a subwatershed in the Choptank River watershed. The catchments within the subwatershed were defined using advanced remotely-sensed data and current geographic information system processing techniques. Water and sediment samples were collected in May–October 2009 and April–June 2010 under mostly baseflow conditions and analyzed for select bacteria, nitrate-N, ammonium-N, total arsenic, total phosphorus (TP), orthophosphate (ortho-P), and particle-phase phosphorus (PP); n = 96 for all analytes except for arsenic, n = 136, and for bacteria, n = 89 (aqueous) and 62 (sediment). Detections of Enterococci and Escherichia coli concentrations were ubiquitous in this subwatershed and showed no correlation to location or land use, however larger bacterial counts were observed shortly after precipitation. Nitrate-N concentrations were not correlated with agricultural lands, which may reflect the small change in percent agriculture and/or the similarity of agronomic practices and crops produced between catchments. Concentration data suggested that ammonia emission and possible deposition to surface waters occurred and that these processes may be influenced by local agronomic practices and climatic conditions. The negative correlation of PP and arsenic concentrations with percent forest was explained by the stronger signal of the head waters and overland flow of particulate phase analytes versus dissolved phase inputs from groundwater. Service roadways at some poultry production facilities were found to redirect runoff from the facilities to neighboring catchment areas, which affected water quality parameters. Results suggest that in this subwatershed, catchments with poultry production facilities are possible sources for arsenic and PP as compared to catchment areas where these facilities were not present.

Choptank River↗

USGS2016

Mercury and methylmercury in aquatic sediment across western North America

Large-scale assessments are valuable in identifying primary factors controlling total mercury (THg) and monomethyl mercury (MeHg) concentrations, and distribution in aquatic ecosystems. Bed sediment THg and MeHg concentrations were compiled for > 16,000 samples collected from aquatic habitats throughout the West between 1965 and 2013. The influence of aquatic feature type (canals, estuaries, lakes, and streams), and environmental setting (agriculture, forest, open-water, range, wetland, and urban) on THg and MeHg concentrations was examined. THg concentrations were highest in lake (29.3 ± 6.5 μg kg − 1 ) and canal (28.6 ± 6.9 μg kg − 1 ) sites, and lowest in stream (20.7 ± 4.6 μg kg − 1 ) and estuarine (23.6 ± 5.6 μg kg − 1 ) sites, which was partially a result of differences in grain size related to hydrologic gradients. By environmental setting, open-water (36.8 ± 2.2 μg kg − 1 ) and forested (32.0 ± 2.7 μg kg − 1 ) sites generally had the highest THg concentrations, followed by wetland sites (28.9 ± 1.7 μg kg − 1 ), rangeland (25.5 ± 1.5 μg kg − 1 ), agriculture (23.4 ± 2.0 μg kg − 1 ), and urban (22.7 ± 2.1 μg kg − 1 ) sites. MeHg concentrations also were highest in lakes (0.55 ± 0.05 μg kg − 1 ) and canals (0.54 ± 0.11 μg kg − 1 ), but, in contrast to THg, MeHg concentrations were lowest in open-water sites (0.22 ± 0.03 μg kg − 1 ). The median percent MeHg (relative to THg) for the western region was 0.7%, indicating an overall low methylation efficiency; however, a significant subset of data (n > 100) had percentages that represent elevated methylation efficiency (> 6%). MeHg concentrations were weakly correlated with THg (r 2 = 0.25) across western North America. Overall, these results highlight the large spatial variability in sediment THg and MeHg concentrations throughout western North America and underscore the important roles that landscape and land-use characteristics have on the MeHg cycle.

Science of the Total Environment↗

USGS2018

Examination of contaminant exposure and reproduction of ospreys (Pandion haliaetus) nesting in Delaware Bay and River in 2015

A study of ospreys ( Pandion haliaetus ) nesting in the coastal Inland Bays of Delaware, and the Delaware Bay and Delaware River in 2015 examined spatial and temporal trends in contaminant exposure, food web transfer and reproduction. Concentrations of organochlorine pesticides and metabolites, polychlorinated biphenyls (PCBs), coplanar PCB toxic equivalents, polybrominated diphenyl ethers (PBDEs) and other flame retardants in sample eggs were generally greatest in the Delaware River. Concentrations of legacy contaminants in 2015 Delaware Bay eggs were lower than values observed in the 1970s through early 2000s. Several alternative brominated flame retardants were rarely detected, with only TBPH [bis(2-ethylhexyl)-tetrabromophthalate)] present in 5 of 27 samples at <5 ng/g wet weight. No relation was found between p,p ′-DDE, total PCBs or total PBDEs in eggs with egg hatching, eggs lost from nests, nestling loss, fledging and nest success. Osprey eggshell thickness recovered to pre-DDT era values, and productivity was adequate to sustain a stable population. Prey fish contaminant concentrations were generally less than those in osprey eggs, with detection frequencies and concentrations greatest in white perch ( Morone americana ) from Delaware River compared to the Bay. Biomagnification factors from fish to eggs for p,p ′-DDE and total PCBs were generally similar to findings from several Chesapeake Bay tributaries. Overall, findings suggest that there have been improvements in Delaware Estuary waterbird habitat compared to the second half of the 20th century. This trend is in part associated with mitigation of some anthropogenic contaminant threats.

Delaware Bay and River↗

USGS2020

Estuarine submerged aquatic vegetation habitat provides organic carbon storage across a shifting landscape

Submerged aquatic vegetation (SAV) thrives across the estuarine salinity gradient providing valuable ecosystem services. Within the saline portion of estuaries, seagrass areas are frequently cited as hotspots for their role in capturing and retaining organic carbon (C org ). Non-seagrass SAV, located in the fresh to brackish estuarine areas, may also retain significant soil C org , yet their role remains unquantified. Given rapidly occurring landscape and salinity changes due to human and natural disturbances, landscape level carbon pool estimates from estuarine SAV habitat blue carbon estimates are needed. We assessed C org stocks in SAV habitat soils from estuarine freshwater to saline habitats (interior deltaic) to saline barrier islands (Chandeleur Island) within the Mississippi River Delta Plain (MRDP), Louisiana, USA. SAV habitats contain C org stocks equivalent to those reported for other estuarine vegetation types (seagrass, salt marsh, mangrove). Interior deltaic SAV C org stocks (231.6 ± 19.5 Mg C org ha −1 ) were similar across the salinity gradient, and significantly higher than at barrier island sites (56.6 ± 10.4 Mg C org ha −1 ). Within the MRDP, shallow water SAV habitat covers up to an estimated 28,000 ha, indicating that soil C org storage is potentially 6.4 ± 0.1 Tg representing an unaccounted C org pool. Extrapolated across Louisiana, and the Gulf of Mexico, this represents a major unaccounted pool of soil C org . As marshes continue to erode, the ability of coastal SAV habitat to offset some of the lost carbon sequestration may be valuable. Our estimates of C org sequestration rates indicated that conversion of eroding marsh to potential SAV habitat may help to offset the reduction of C org sequestration rates. Across Louisiana, we estimated SAV to offset this loss by as much as 79,000 Mg C yr −1 between the 1960s and 2000s.

Louisiana↗

USGS2022

Comparative behavioral ecotoxicology of Inland Silverside larvae exposed to pyrethroids across a salinity gradient

Pyrethroids, a class of commonly used insecticides, are frequently detected in aquatic environments, including estuaries. The influence that salinity has on organism physiology and the partitioning of hydrophobic chemicals, such as pyrethroids, has driven interest in how toxicity changes in saltwater compared to freshwater. Early life exposures in fish to pyrethroids cause toxicity at environmentally relevant concentrations, which can alter behavior. Behavior is a highly sensitive endpoint that influences overall organism fitness and can be used to detect toxicity of environmentally relevant concentrations of aquatic pollutants. Inland Silversides ( Menidia beryllina ), a commonly used euryhaline model fish species, were exposed from 5 days post fertilization (~1-day pre-hatch) for 96 h to six pyrethroids: bifenthrin, cyfluthrin, cyhalothrin, cypermethrin, esfenvalerate and permethrin. Exposures were conducted at three salinities relevant to brackish, estuarine habitat (0.5, 2, and 6 PSU) and across 3 concentrations, either 0.1, 1, 10, and/or 100 ng/L, plus a control. After exposure, Inland Silversides underwent a behavioral assay in which larval fish were subjected to a dark and light cycle stimuli to determine behavioral toxicity. Assessment of total distanced moved and thigmotaxis (wall hugging), used to measure hyper/hypoactivity and anxiety like behavior, respectively, demonstrate that even at the lowest concentration of 0.1 ng/L pyrethroids can induce behavioral changes at all salinities. We found that toxicity decreased as salinity increased for all pyrethroids except permethrin. Additionally, we found evidence to suggest that the relationship between log K OW and thigmotaxis is altered between the lower and highest salinities.

Science of the Total Environment↗

USGS2005

Relative abundance, age, growth, and fecundity of grubby Myoxocephalus aenaeus in Niantic River and Niantic Bay, Long Island Sound

Grubby (Myoxocephalus aenaeus, Cottidae) is a common benthic fish of inshore waters and estuaries of eastern Long Island Sound; however, little information exists on their life history or population demographics. This study utilised a long-term data series (1976-2002) to assess grubby life history and population demographics and explores trends in the Niantic River and Niantic Bay populations. In addition, we examined the age, size, and fecundity of adult grubby in 2001-02 to determine the population characteristics in the region. Mean grubby catch per unit effort (CPUE) in Niantic Bay ranged from 0.4 per trawl in 1976 to 2.9 per trawl in 1984 while river CPUE ranged from 0.4 per trawl in 1977 to 7.6 per trawl in 1989. Catch of grubby in bottom trawls varied seasonally with highest CPUE occurring in winter. Highest entrainment of grubby larvae occurred in 2001 while the lowest entrainment observed was in 1991. Four age classes, 0+ through III+, were derived from otolith analysis (N = 51) although length frequency analysis suggested the possibility of older fish in the population. The total number of eggs in ovaries ranged from 286 to 16 451 for grubby (N = 64) between 52 mm and 155 mm TL. Results of this study indicated a decline in abundance of adult grubby over the 26-year period, possibly related to concurrent declines in eelgrass (Zostera marina) abundance and/or increased water temperature. ?? 2005 Elsevier B.V. All rights reserved.

Journal of Sea Research↗

USGS2022

Nutrient limitation of phytoplankton in three tributaries of Chesapeake Bay: Detecting responses following nutrient reductions

Many coastal ecosystems suffer from eutrophication, algal blooms, and dead zones due to excessive anthropogenic inputs of nitrogen (N) and phosphorus (P). This has led to regional restoration efforts that focus on managing watershed loads of N and P. In Chesapeake Bay, the largest estuary in the United States, dual nutrient reductions of N and P have been pursued since the 1980s. However, it remains unclear whether nutrient limitation – an indicator of restriction of algal growth by supplies of N and P – has changed in the tributaries of Chesapeake Bay following decades of reduction efforts. Toward that end, we analyzed historical data from nutrient-addition bioassay experiments and data from the Chesapeake Bay long-term water-quality monitoring program for six stations in three tidal tributaries (i.e., Patuxent, Potomac, and Choptank Rivers). Classification and regression tree (CART) models were developed using concurrent collections of water-quality parameters for each bioassay monitoring location during 1990-2003, which satisfactorily predicted the bioassay-based measures of nutrient limitation (classification accuracy = 96%). Predictions from the CART models using water-quality monitoring data showed enhanced nutrient limitation over the period of 1985-2020 at four of the six stations, including the downstream station in each of these three tributaries. These results indicate detectable, long-term water-quality improvements in the tidal tributaries. Overall, this research provides a new analytical tool for detecting signs of ecosystem recovery following nutrient reductions. More broadly, the approach can be adapted to other waterbodies with long-term bioassays and water-quality data sets to detect ecosystem recovery.

Delaware, Maryland, Pennsylvania, Virginia, West V↗

USGS2017

Rapid Holocene coastal change revealed by high-resolution micropaleontological analysis, Pamlico Sound, North Carolina, USA

Foraminiferal analyses of 404 contiguous samples, supported by diatom, lithologic, geochronologic and seismic data, reveal both rapid and gradual Holocene paleoenvironmental changes in an 8.21-m vibracore taken from southern Pamlico Sound, North Carolina. Data record initial flooding of a latest Pleistocene river drainage and the formation of an estuary 9000. yr ago. Estuarine conditions were punctuated by two intervals of marine influence from approximately 4100 to 3700 and 1150 to 500. cal. yr BP. Foraminiferal assemblages in the muddy sand facies that accumulated during these intervals contain many well-preserved benthic foraminiferal species, which occur today in open marine settings as deep as the mid shelf, and significant numbers of well-preserved planktonic foraminifera, some typical of Gulf Stream waters. We postulate that these marine-influenced units resulted from temporary destruction of the southern Outer Banks barrier islands by hurricanes. The second increase in marine influence is coeval with increased rate of sea-level rise and a peak in Atlantic tropical cyclone activity during the Medieval Climate Anomaly. This high-resolution analysis demonstrates the range of environmental variability and the rapidity of coastal change that can result from the interplay of changing climate, sea level and geomorphology in an estuarine setting. ?? 2011 University of Washington.

North Carolina↗

USGS2003

Interseasonal covariability of Sierra Nevada streamflow and San Francisco Bay salinity

The ecosystems of the San Francisco Bay estuary are influenced by the salinity of its waters, which in turn depends on flushing by freshwater inflows from the western slopes of the Sierra Nevada. Estimates of full-natural flows in eight major rivers that flush the Bay are analyzed here by extended empirical-orthogonal-function analyses to characterize distinct ‘modes’ of seasonal flow and runoff variability. These modes provide a clear identification of the seasons in which the various rivers respond to hydroclimatic forcings and the seasons during which the rivers most strongly affect San Francisco Bay salinities. About 60 percent of the runoff variability is shared by the rivers over the course of a year but season-to-season differences among the rivers are more subtly distributed. Autumn and winter streamflows respond directly to concurrent (autumn and winter) precipitation and temperatures. Autumn and winter salinities are dominated by these flows, which in each season reflect mostly variations in flows from the central Sierra Nevada and the large Sacramento River. In contrast, spring runoff-rate and streamflow modes are functions of precipitation and temperature during the entire wet (winter and spring) season and are dominated by rivers of the central and southern Sierra Nevada. In turn, the critical spring salinities depend most on the streamflow fluctuations in those central and southern rivers.

California↗

USGS2000

Origin of Amazon mudbanks along the northeastern coast of South America

Seismic profiles, sediment cores, and water column measurements were collected along the northeastern coast of Brazil to examine the origin of mudbanks in the Amazon coastal mud belt. These 10-60-km-long, shore-attached features previously had been observed to migrate along the 1200 km coast of the Guianas in response to wave forcing. CHIRP (3.5 kHz) seismic profiles of the shoreface and inner shelf located two mudbanks updrift of the previous eastern limit in French Guiana. 210Pb geochronology shows that these two banks are migrating to the northwest over a relict mud surface in 5-20 m water depth. The mudbanks are 3-4 m thick and are translating over a modern shoreface mud wedge deposited by previous mudbank passage in < 5 m water depth. Initial mudbank development is taking place on the intertidal and shallow subtidal mudflats at Cabo Cassipore, associated with an alongshore-accreting clinoform feature. Sediment trapping in this area is controlled by the nearshore presence of strong water column stratification produced by the enormous Amazon freshwater discharge on the shelf and by proximity to the Cassipore River estuary. Seasonal and decadal periods of sediment supply and starvation in this area likely are controlled by variations in northwest trade wind intensity. (C) 2000 Elsevier Science B.V.

Marine Geology↗