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USGS2018

Northeast

The distinct seasonality of the Northeast’s climate supports a diverse natural landscape adapted to the extremes of cold, snowy winters and warm to hot, humid summers. This natural landscape provides the economic and cultural foundation for many rural communities, which are largely supported by a diverse range of agricultural, tourism, and natural resource-dependent industries (see Ch. 10: Ag & Rural, Key Message 4) . The recent dominant trend in precipitation throughout the Northeast has been towards increases in rainfall intensity, with increases in intensity exceeding those in other regions of the contiguous United States. Further increases in rainfall intensity are expected, with increases in total precipitation expected during the winter and spring but with little change in the summer. Monthly precipitation in the Northeast is projected to be about 1 inch greater for December through April by end of century (2070–2100) under the higher scenario (RCP8.5). Ocean and coastal ecosystems are being affected by large changes in a variety of climate-related environmental conditions. These ecosystems support fishing and aquaculture, tourism and recreation, and coastal communities. Observed and projected increases in temperature, acidification, storm frequency and intensity, and sea levels are of particular concern for coastal and ocean ecosystems, as well as local communities and their interconnected social and economic systems. Increasing temperatures and changing seasonality on the Northeast Continental Shelf have affected marine organisms and the ecosystem in various ways. The warming trend experienced in the Northeast Continental Shelf has been associated with many fish and invertebrate species moving northward and to greater depths. Because of the diversity of the Northeast’s coastal landscape, the impacts from storms and sea level rise will vary at different locations along the coast. Northeastern cities, with their abundance of concrete and asphalt and relative lack of vegetation, tend to have higher temperatures than surrounding regions due to the urban heat island effect. During extreme heat events, nighttime temperatures in the region’s big cities are generally several degrees higher than surrounding regions, leading to higher risk of heat-related death. Urban areas are at risk for large numbers of evacuated and displaced populations and damaged infrastructure due to both extreme precipitation events and recurrent flooding, potentially requiring significant emergency response efforts and consideration of a long-term commitment to rebuilding and adaptation, and/or support for relocation where needed. Much of the infrastructure in the Northeast, including drainage and sewer systems, flood and storm protection assets, transportation systems, and power supply, is nearing the end of its planned life expectancy. Climate-related disruptions will only exacerbate existing issues with aging infrastructure. Sea level rise has amplified storm impacts in the Northeast (Key Message 2), contributing to higher surges that extend farther inland, as demonstrated in New York City in the aftermath of Superstorm Sandy in 2012. Service and resource supply infrastructure in the Northeast is at increasing risk of disruption, resulting in lower quality of life, economic declines, and increased social inequality. Loss of public services affects the capacity of communities to function as administrative and economic centers and triggers disruptions of interconnected supply chains (Ch. 16: International, Key Message 1) . Increases in annual average temperatures across the Northeast range from less than 1°F (0.6°C) in West Virginia to about 3°F (1.7°C) or more in New England since 1901. Although the relative risk of death on very hot days is lower today than it was a few decades ago, heat-related illness and death remain significant public health problems in the Northeast. For example, a study in New York City estimated that in 2013 there were 133 excess deaths due to extreme heat. These projected increases in temperature are expected to lead to substantially more premature deaths, hospital admissions, and emergency department visits across the Northeast. For example, in the Northeast we can expect approximately 650 additional premature deaths per year from extreme heat by the year 2050 under either a lower (RCP4.5) or higher (RCP8.5) scenario and from 960 (under RCP4.5) to 2,300 (under RCP8.5) more premature deaths per year by 2090. Communities, towns, cities, counties, states, and tribes across the Northeast are engaged in efforts to build resilience to environmental challenges and adapt to a changing climate. Developing and implementing climate adaptation strategies in daily practice often occur in collaboration with state and federal agencies (e.g., New Jersey Climate Adaptation Alliance 2017, New York Climate Clearinghouse 2017, Rhode Island STORMTOOLS 2017, EPA 2017, CDC 2015 ). Advances in rural towns, cities, and suburban areas include low-cost adjustments of existing building codes and standards. In coastal areas, partnerships among local communities and federal and state agencies leverage federal adaptation tools and decision support frameworks (for example, NOAA’s Digital Coast, USGS’s Coastal Change Hazards Portal, and New Jersey’s Getting to Resilience). Increasingly, cities and towns across the Northeast are developing or implementing plans for adaptation and resilience in the face of changing climate (e.g., EPA 2017 ). The approaches are designed to maintain and enhance the everyday lives of residents and promote economic development. In some cities, adaptation planning has been used to respond to present and future challenges in the built environment. Regional efforts have recommended changes in design standards when building, replacing, or retrofitting infrastructure to account for a changing climate.

Report↗

USGS1999

Klamath-Siskiyou herpetofauna: Biogeographic patterns and conservation strategies

The Klamath-Siskiyou region of southwest Oregon and northwest California (USA) has some of the most complex landscape mosaics and plant communities in western North America, reflecting its marked diversity of precipitation and topography. With 38 native species of amphibians and reptiles, the Klamath-Siskiyou region has the most species-rich herpetofauna of any similarly sized mountain range in the Pacific Northwest. Although it is a biodiversity 'hot spot,' there are only two endemic species, both salamanders, in the Klamath-Siskiyou region. High diversity is due to the overlap of two major biogeographic groups: the Arcto- (= northern) and Madro- (= southern) Tertiary herpetofaunas. Many of the amphibians in the Klamath-Siskiyou region are restricted to specialized habitats. Much of our knowledge about the biology of the regional fauna is based on studies elsewhere. Distributional surveys and ecological research are needed to address how the herpetofauna responds to timber harvest and other human activities that may reduce populations and increase fragmentation of suitable habitats. Conservation of the region's diverse herpetofauna should emphasize strategies directed at habitat specialists and species at the latitudinal limits of their ranges.

California, Oregon↗

USGS2011

Vegetation assessment of forests of Pagan Island, Commonwealth of the Northern Mariana Islands

As part of the Marianas Expedition Wildlife Surveys-2010, the forest vegetation of the island of Pagan, Commonwealth of the Northern Mariana Islands (CNMI), was sampled with a series of systematic plots along 13 transects established for monitoring forest bird populations. Shrubland and grassland were also sampled in the northern half of the island. Data collected were woody plant density, tree diameter at breast height, woody plant density in height classes below 2 m, and ground cover measured with the point-intercept method. Coconut forests ( Cocos nucifera ) were generally found to have low native tree diversity, little regeneration of trees and shrubs in the forest understory, and little live ground cover. The sole exception was a coconut-dominated forest of the northeast side of the island that exhibited high native tree diversity and a large number of young native trees in the understory. Ironwood ( Casuarina equisetifolia ) forests on the northern half of the island were nearly monocultures with almost no trees other than ironwood in vegetation plots, few woody plants in the understory, and low ground cover dominated by native ferns. Mixed native forests of both northern and southern sections of the island had a diversity of native tree species in both the canopy and the sparse understory. Ground cover of native forests in the north had a mix of native and alien species, but that of the southern half of the island was dominated by native ferns and woody plants. During vegetation surveys in June–July 2010, 215 vascular plant species were observed on Pagan; 21 new island records of alien plants and 12 new island records of native plants were documented. Many of the new and recently sighted alien plants of the northern section of the island appeared to be in the incipient stage of invasion. Most of the new native plant sightings and a number of other rare tree and shrub species of Pagan were limited to forests of the rugged southern half of the island.

Pagan Island↗

USGS1996

Water transfer projects and the role of fisheries biologists

Water transfer projects are commonly considered important mechanisms for meeting increasing water demands. However, the movement of water from one area to another may have broad ecosystem effects, including on fisheries. The Southern Division of the American Fisheries Society held a symposium in 1995 at Virginia Beach, Virginia, to discuss the ecological consequences of water transfer and identify the role of fisheries biologists in such projects. Presenters outlined several case studies, including the California State Water Project, Garrison Diversion Project (North Dakota), Lake Texoma Water Transfer Project (Oklahoma-Texas), Santee-Cooper Diversion and Re-diversion projects (South Carolina), and Tri-State Comprehensive Study (Alabama-Florida-Georgia). Results from these studies suggest that fisheries biologists have provided critical information regarding potential ecological consequences of water transfer. If these professionals continue to be called for information regarding the ecological consequences of water transfer projects, developing a broader understanding of the ecological processes that affect the fish species they manage may be necessary. Although the traditional role of fisheries biologists has focused on the fishing customer base, fisheries management issues are only one component of the broad spectrum of ecosystem issues resulting from water transfer.

Conference Paper↗

USGS1998

Significance of nearshore trace-fossil assemblages of the cambro-ordovician deadwood formation and Aladdin Sandstone, South Dakota

The Cambro-Ordovician Deadwood Formation and Aladdin Sandstone represent intertidal and subtidal, nearshore deposystems that contain few well-preserved body fossils, but contain abundant trace fossils. The present study uses the much neglected trace-fossil fauna to describe the diverse paleoenvironments represented in the Deadwood-Aladdin deposystems, and to better understand the environmental conditions that controlled benthic life in the Early Paleozoic. The Deadwood-Aladdin ichnotaxa can be separated into three distinct assemblages based on the changing sedimentologic and hydrodynamic conditions that existed across the Cambro-Ordovician shelf. Trace-fossil assemblages and corresponding lithofacies characteristics indicate that the Deadwood-Aladdin deposystems formed within an intertidal-flat and subtidal-shelf environment. Based on the distribution and numbers of preserved ichnotaxa, the intertidal flat can be subdivided further into an ecologically stressful inner sand-flat environment, and a more normal marine outer sand-flat environment, both of which belong to a mixed, Skolithos-Cruziana softground ichnofacies. The inner sand flat is characterized by low diversity, low numbers, and a general lack of complexly constructed ichnotaxa. Trace fossils common to both assemblages tend to be smaller in the inner flat compared to the outer sand flat. Taphonomic effects, such as substrate type and sediment heterogeneity, also aid in differentiating between the inner and outer sand-flat assemblages. The subtidal shelf environment is categorized in the Cruziana Ichnofacies. Ichnological evidence of periodic tempestite deposition and hardground development within this subtidal regime is manifested by high diversity and low abundance of ichnogenera.

Annals of Carnegie Museum↗

USGS1998

Operational modeling system with dynamic-wave routing

A near real-time streamflow-simulation system utilizing continuous-simulation rainfall-runoff generation with dynamic-wave routing is being developed by the U.S. Geological Survey in cooperation with the Du Page County Department of Environmental Concerns for a 24-kilometer reach of Salt Creek in Du Page County, Illinois. This system is needed in order to more effectively manage the Elmhurst Quarry Flood Control Facility, an off-line stormwater diversion reservoir located along Salt Creek. Near real time simulation capabilities will enable the testing and evaluation of potential rainfall, diversion, and return-flow scenarios on water-surface elevations along Salt Creek before implementing diversions or return-flows. The climatological inputs for the continuous-simulation rainfall-runoff model, Hydrologic Simulation Program - FORTRAN (HSPF) are obtained by Internet access and from a network of radio-telemetered precipitation gages reporting to a base-station computer. The unit area runoff time series generated from HSPF are the input for the dynamic-wave routing model. Full Equations (FEQ). The Generation and Analysis of Model Simulation Scenarios (GENSCN) interface is used as a pre- and post-processor for managing input data and displaying and managing simulation results. The GENSCN interface includes a variety of graphical and analytical tools for evaluation and quick visualization of the results of operational scenario simulations and thereby makes it possible to obtain the full benefit of the fully distributed dynamic routing results.

Conference Paper↗

USGS1999

Evaluation of stream water quality in Atlanta, Georgia, and the surrounding region (USA)

A water-quality index (WQI) was developed from historical data (1986-1995) for streams in the Atlanta Region and augmented with 'new' and generally more comprehensive biweekly data on four small urban streams, representing an industrial area, a developed medium-density residential area and developing and developed low-density residential areas. Parameter WQIs were derived from percentile ranks of individual water-quality parameter values for each site by normalizing the constituent ranks for values from all sites in the area for a base period, i.e. 1990-1995. WQIs were developed primarily for nutrient-related parameters due to data availability. Site WQIs, which were computed by averaging the parameter WQIs, range from 0.2 (good quality) to 0.8 (poor quality), and increased downstream of known nutrient sources. Also, annual site WQI decreases from 1986 to 1995 at most long-term monitoring sites. Annual site WQI for individual parameters correlated with annual hydrological characteristics, particularly runoff, precipitation quantity, and water yield, reflecting the effect of dilution on parameter values. The WQIs of the four small urban streams were evaluated for the core-nutrient-related parameters, parameters for specific dissolved trace metal concentrations and sediment characteristics, and a species diversity index for the macro-invertebrate taxa. The site WQI for the core-nutrient-related parameters used in the retrospective analysis was, as expected, the worst for the industrial area and the best for the low-density residential areas. However, macro-invertebrate data indicate that although the species at the medium-density residential site were diverse, the taxa at the site were for species tolerant of degraded water quality. Furthermore, although a species-diversity index indicates no substantial difference between the two low-density residential areas, the number for macro-invertebrates for the developing area was much less than that for the developed area, consistent with observations of recent sediment problems probably associated with construction in the basin. However, sediment parameters were similar for the two sites suggesting that the routine biweekly measurements may not capture the short-term increases in sediment transport associated with rainstorms. The WQI technique is limited by the number and types of parameters included in it, the general conditions of those parameters for the range of conditions in area streams, and by the effects of external factors, such as hydrology, and therefore, should be used with caution.

IAHS-AISH Publication↗

USGS2011

Herpetofauna of the cedar glades and associated habitats of the Inner Central Basin of middle Tennessee

The cedar glades and barrens of the Inner Central Basin (ICB) of middle Tennessee support a unique and diverse flora and fauna and represent some of the state's most valued natural areas. We conducted herpetofaunal inventories of the cedar glades, associated barrens, cedar-hardwood forest, and adjacent aquatic habitats of the Stones River drainage of Middle Tennessee, focusing our sampling effort primarily at seven state- or federally owned properties in Rutherford and Wilson counties. These properties included Stones River National Battlefield (SRNB), Flat Rock State Natural Area (FRSNA), Vesta Cedar Glade State Natural Area (VSNA), Fall Creek Recreation Area (FCRA) on J. Percy Priest Wildlife Management Area, Cedars of Lebanon State Forest (CLSF), Cedars of Lebanon State Forest Natural Area (CLSNA), and Cedars of Lebanon State Park (CLSP). We used a variety of inventory techniques in terrestrial, aquatic, and subterranean habitats to survey these properties periodically from 1989 to 2010. We documented 49 species (22 amphibian and 27 reptile) accounting for 75.4% of the 65 herpetofaunal species thought to occur in the ICB, including records for Cemophora coccinea, Aneides aeneus, Gyrinophilus palleucus, Ambystoma barbouri, and Pseudotriton montanus. We found differences in alpha and beta diversity between sites, with the CLSF complex containing a high of 41 herpetofaunal species and FRSNA containing a low of 23 species. Beta diversity comparisons indicated similarity in amphibian species composition between FRSNA and CLSF and between SRNB and CLSF (9 shared species), and in reptile species composition between VSNA and the CLSF complex (16 shared species). We compare the results of our inventory with two previous studies conducted in the area and discuss the relative abundance, conservation, and threats to the herpetofaunal community of these habitats.

Herpetological Conservation and Biology↗

USGS2012

2011 Georgiana Slough non-physical barrier performance evaluation project report

The Sacramento River and its tributaries support populations of anadromous fish species including winter-run, spring-run, fall-run, and late fall–run Chinook salmon ( Oncorhynchus tshawytscha ); and steelhead ( O. mykiss ). Several of these species are listed as threatened or endangered under the California Endangered Species Act (CESA), federal Endangered Species Act (ESA), or both. These species spawn and rear in Sacramento River tributaries; adults use the mainstem Sacramento River for primarily upstream migration and juveniles use it for downstream migration. Juvenile Chinook salmon and steelhead migrate through the lower river during winter and spring. During their downstream migration, juvenile salmonids encounter alternative pathways, such as Sutter and Steamboat Sloughs, the Sacramento–San Joaquin Delta (Delta), Delta Cross Channel (DCC), and Georgiana Slough. Likewise, sturgeon juveniles migrate downstream in the Sacramento River basin to the Delta, utilizing the distributary channels to rear within and migrate through the system. Georgiana Slough is a natural channel that allows water and fish to move into the interior Delta. Previous studies have demonstrated that juvenile Chinook salmon experience greater mortality when migrating into Georgiana Slough than those juveniles that continue to migrate downstream in the Sacramento River (Perry 2010). Movement and/or diversion of these fish into the interior and south Delta increases the likelihood of losses through predation, entrainment into non-project Delta diversions, and mortality associated with the State Water Project (SWP) and Central Valley Project (CVP) pumping facilities in the south Delta (Perry 2010; NMFS 2009). Figure ES-1 shows the migration pathways in the lower Sacramento River and Delta for outmigrating anadromous salmonids, and the location of the DCC, and the SWP and CVP pumping facilities in the south Delta. Passage of juvenile salmonids from the Sacramento River into the interior Delta through the DCC can be reduced through seasonal closure of the radial gates (February through May); however, no similar protection is available to reduce the movement of juvenile salmonids from the Sacramento River into the interior Delta through Georgiana Slough. Flows into Georgiana Slough improve water quality and flushing in the interior Delta and free access encourages use by recreational boaters. Because of these benefits, alternatives to the installation of a physical barrier (i.e. radial gates), are being investigated. Under the ESA, the National Marine Fisheries Service (NMFS) issued the 2009 Biological and Conference Opinion for the Long‐Term Operations of the Central Valley Project and State Water Project (BO) for Chinook salmon and other listed anadromous fish species (NMFS 2009). Reasonable and Prudent Alternative (RPA) Action IV.1.3 of the BO requires the California Department of Water Resources (DWR) and the U.S. Bureau of Reclamation (Reclamation) to consider engineering solutions to reduce the diversion of juvenile salmonids from the Sacramento River into the interior and south Delta. DWR implemented the 2011 Georgiana Slough NonPhysical Barrier (GSNPB) Study to test the effectiveness of using a non-physical barrier, referred to as a behavioral Bio-Acoustic Fish Fence (BAFF), that combines three stimuli to deter juvenile Chinook salmon from entering Georgiana Slough: sound, high-intensity modulated light (previously known as stroboscopic light), and a bubble curtain. This report presents the results of the experimental tests conducted in 2011.

California↗

USGS2013

Mobile Bay

Mobile Bay is the largest bay found in Alabama’s coastal area (Handley et al., 2007). It was named an Estuary of National Significance in 1995 under the U.S. Environmental Protection Agency’s (EPA) National Estuary Program (NEP), and its Comprehensive Conservation Management Plan was completed in 2002. Mobile Bay is 1,070 km 2 (413 miles 2 ) in area and 51 km (32 miles) long, making it the sixth largest estuary in the continental United States (Mobile Bay NEP, 2008). Its ecosystem provides habitat for more than 300 species of birds, 310 species of fish, 68 species of reptiles, 57 species of mammals, 40 species of amphibians, and 15 species of shrimp (Mobile Bay NEP, 1997). Mobile Bay lies between the Mississippi and Atlantic Flyways (Mobile Bay NEP, 2003). Commercial and residential development and industrial use is heavy in the Mobile Bay area. Although local growth and industrial markets support the Mobile Bay area economy, the resulting environmental damage to the very ecosystem upon which they depend remains a threat to the environment, economy, and population. The Mobile Bay ecosystem boasts high biological diversity and productivity and supports many freshwater and saltwater species of recreational and commercial importance. The great diversity of Mobile Bay reflects the diversity of Alabama, which is home to the largest number of different plant and animal species of all states east of the Mississippi River (Stein, 2002), and is bolstered by the unique climate and geographic conditions surrounding the bay. Freshwater inflow from the Mobile-Tensaw River Delta, ranging from 60,000 to 3,700,000 gallons per second (Wallace, 1996), mixes with saltwater from the Gulf of Mexico, which enters Mobile Bay via wind and tides (Burgan and Engle, 2006). Because of the unique conditions surrounding Mobile Bay, including shallow waters, a dynamic climate, and artificial hydrologic modifications—such as the construction of the Mobile Bay Causeway in the 1920s, which serves as an unintentional barrier between Delta waters north of the Causeway and saline waters south of the Causeway, the salinity of Mobile Bay is highly variable. Mobile Bay receives an average of 165 cm (65 inches) of rain per year from tropical storms, summer thunderstorms, and winter cold fronts (Stout et al., 1998). The climate and geography that have made Mobile Bay so rich in resources have also contributed to the threats surrounding its ecosystem. The extensive amount of rain in Mobile Bay creates large amounts of runoff, polluting the waters with fertilizers, chemicals, sediment, oil, trash, and sewage (Mobile Bay NEP, 1997). Tourism, ecotourism, recreational and commercial fishing, recreational boating, shipping, and chemical, pulp, and paper production are significant industries in Mobile Bay and the surrounding areas. Despite the approximate \$3 billion and 55,000 jobs these industries bring into the community (Alabama Tourism Department, 2010), the growth, development, and environmental stress they create are major threats to the Mobile Bay ecosystem. Among the nation’s states, Alabama ranks fifth in number of different species (144 endemic species), second in number of extinctions that have already occurred (90 extinct species) and fourth in number of species at risk for extinction (14.8% at risk out of 4,533 total species; Stein, 2002). Twenty-one of these threatened and endangered species are found in Mobile Bay, whose brackish waters provide a nursery area for many species of vertebrates and invertebrates. Some of these species include the Alabama sturgeon, Gulf sturgeon, heavy pigtoe mussel, inflated heel-splitter mussel, West Indian manatee, Alabama beach mouse, Perdido beach mouse, Alabama red-bellied turtle, gopher tortoise, Kemp’s ridley sea turtle, green sea turtle, loggerhead sea turtle, eastern indigo snake, flatwoods salamander, piping plover, red-cockaded woodpecker, and wood stork. Habitat loss underlies the decline of some bird species in Mobile Bay, and large mammals such as the red wolf, Florida panther, and Florida black bear are no longer found in the area. However, some rare species, such as the swallow-tailed kite, sandhill crane, and gopher tortoise can still be found (Duke and Kruczynski, 1992). The value of wetlands in Mobile Bay and the rest of the Gulf of Mexico is still being investigated. Although various monetary valuations of wetlands exist, critics remark that undervaluation of wetlands is inevitable (Mobile Bay NEP, 2008) and that estimates often do not place appropriate value on ecological services (Mitsch and Gosselink, 2000). Additionally, many estimates account only for anthropogenic values. One estimate concludes that one acre of wetlands performs \$3,000 worth of water purification each year (Mobile Bay NEP, 1997). With more than 76,890 hectares (190,000 acres) of wetlands in the Mobile Bay area, that equates to a value exceeding one-half billion dollars every year. Tourism, fishing, boating, production, and shipping are significant industries in the Mobile Bay area. More than 90% of fish landed in recreational and commercial fishing in the bay depend on bay habitat, including wetlands, for life requirements (Mobile Bay NEP, 1997). The Port of Mobile is Alabama’s only ocean-ship port (Mobile Bay NEP, 2008). Baldwin County, on the eastern side of the bay, experienced a population increase of 75% from 1990 to 2007, with an 89% increase in housing units (Mobile Bay NEP, 2008). Development and industry support the Mobile Bay economy, but they depend on the continued health, sustainability, and production of the water and living resources of the Mobile Bay ecosystem. Wetland loss, along with other forms of environmental degradation, remains a threat to the Mobile Bay ecosystem and Mobile Bay’s socioeconomic foundation.

Alabama↗

USGS1982

Reconnaissance of the quality of surface water in the San Rafael River basin, Utah

The water-quality reconnaissance of the San Rafael River basin, Utah, encompassed an area of about 2,300 square miles (5,960 square kilometers). Data were obtained by the U.S. Geological Survey one or more times at 116 sites from June 1977 to September 1978. At 19 other sites visited during the same period, the streams were dry. Precipitation and stream discharge were significantly less than normal during 1977 and ranged from less than to more than normal during 1978. Exposed rocks in the San Rafael River basin range in age from Permian to Holocene. The Carmel Formation of Jurassic age and various members of the Mancos Shale of Cretaceous age are major contributors of dissolved solids to streams in the basin. There are eight major reservoirs having a total usable capacity of 115, 000 acre-feet (142 cubic hectometers); seven are mainly for irrigation supply; one, having a usable capacity of 30,530 acre-feet (38 cubic hectometers), is for power plant water supply. From about April to November, major diversions from Huntington, Cottonwood, and Ferron Creeks nearly deplete the flow downstream; during such periods, downstream flow in these streams and in the San Rafael River is mainly irrigation-return flow and some ground-water seepage. The water at the points of major diversion on Huntington, Cottonwood, and Ferron Creeks is of excellent quality for irrigation; salinity hazard is low to medium, and sodium hazard is low. Dissolved-solids concentrations are less than 500 milligrams per liter. The water at the mouths of Huntington, Cottonwood, and Ferron Creeks has markedly larger dissolved-solids concentrations than does the water upstream from major diversions. The changes in the chemical quality occur in stream reaches that cross a belt of land 10 to 15 miles (16 to 24 kilometers) wide where the Mancos Shale is widely exposed. This also is the area where nearly all the intensive irrigation in the San Rafael River basin is practiced. There are no perennial tributaries to the San Rafael River downstream from Ferron Creek. Except during infrequent short periods of runoff from cloudbursts or snowmelt, the flow in the San Rafael River is composed of the flow that reaches the mouths of Huntington, Cottonwood, and Ferron Creeks. The quality of water in the mainstem of the San Rafael River is largely determined by the major consumptive use of water for irrigation in upstream areas and by the poor quality of irrigation-return flow. During the data-collection periods for this study, dissolved-solids concentrations in the San Rafael River were more than 2,000 milligrams per liter except during snowmelt runoff in June 1978 and during a major flood in August 1977. The concentrations of trace elements, with the exception of strontium, were relatively small; strontium concentrations exceeded 1,500 micrograms per liter at seven sites. Most of the suspended-sediment discharge of the San Rafael River probably occurs during a few days each year and results mainly from cloudburst runoff.

Utah↗

USGS2013

Vascular plant and vertebrate species richness in national parks of the eastern United States

Given the estimates that species diversity is diminishing at 50-100 times the normal rate, it is critical that we be able to evaluate changes in species richness in order to make informed decisions for conserving species diversity. In this study, we examined the potential of vascular plant species richness to be used as a surrogate for vertebrate species richness in the classes of amphibians, reptiles, birds, and mammals. Vascular plants, as primary producers, represent the biotic starting point for ecological community structure and are the logical place to start for understanding vertebrate species associations. We used data collected by the United States (US) National Park Service (NPS) on species presence within parks in the eastern US to estimate simple linear regressions between plant species richness and vertebrate richness. Because environmental factors may also influence species diversity, we performed simple linear regressions of species richness versus natural logarithm of park area, park latitude, mean annual precipitation, mean annual temperature, and human population density surrounding the parks. We then combined plant species richness and environmental variables in multiple regressions to determine the variables that remained as significant predictors of vertebrate species richness. As expected, we detected significant relationships between plant species richness and amphibian, bird, and mammal species richness. In some cases, plant species richness was predicted by park area alone. Species richness of mammals was only related to plant species richness. Reptile species richness, on the other hand, was related to plant species richness, park latitude and annual precipitation, while amphibian species richness was related to park latitude, park area, and plant species richness. Thus, plant species richness predicted species richness of different vertebrate groups to varying degrees and should not be used exclusively as a surrogate for vertebrate species richness. Plant species richness should be included with other variables such as area and climate when considering strategies to manage and conserve species in US National Parks. It is not always appropriate to draw conclusions about analyses of taxonomic surrogates from one area to another. Two patterns evident from the linear regressions were the increase in species richness with the increase of park area and with increase of vascular plant species richness. To test whether there were differences in these patterns among networks, we used analysis of covariance (ANCOVA). Differences among networks were detected only in bird species richness versus plant species richness and for all taxa except mammals for vertebrate species richness versus park area. Some of these results may be due to small sample size among networks, and therefore, low statistical power. Other factors that could have contributed to these results were differences in average park area and habitat heterogeneity among networks, latitudinal gradients, low variation in mean annual precipitation, and different use of vegetation by migratory species. Based on these results we recommend that management of biodiversity be approached from local and site specific criteria rather than applying management directives derived from other regions of the US. It is also recommended that analyses similar to those presented here be conducted for all national parks, once data become available for all networks in the US, to gain a better understanding of how vascular plant species richness, area, and vertebrate species richness are related in the US.

Natural Resource Technical Report NPS/NCR/NCRO/NRT↗

USGS2014

Status of rainbow smelt in the U.S. waters of Lake Ontario, 2013

Rainbow Smelt Osmerus mordax are the second most abundant pelagic prey fish in Lake Ontario after Alewife Alosa psuedoharengus . The 2013, USGS/NYSDEC bottom trawl assessment indicated the abundance of Lake Ontario age-1 and older Rainbow Smelt decreased by 69% relative to 2012. Length frequency-based age analysis indicated that age-1 Rainbow Smelt constituted approximately 50% of the population, which is similar to recent trends where the proportion of age-1 has ranged from 95% to 42% of the population. While they constituted approximately half of the catch, the overall abundance index for age 1 was one of the lowest observed in the time series, potentially a result of cannibalism from the previous year class. Combined data from all bottom trawl assessments along the southern shore and eastern basin indicate the proportion of the fish community that is Rainbow Smelt has declined over the past 30 years. In 2013 the proportion of the pelagic fish catch (only pelagic species) that was Rainbow Smelt was the second lowest in the time series at 3.1%. Community diversity indices, based on bottom trawl catches, indicate that Lake Ontario fish community diversity, as assessed by bottom trawls, has sharply declined over the past 36 years and in 2013 the index was the lowest value in the time series. Much of this community diversity decline is driven by changes in the pelagic fish community and dominance of Alewife.

Lake Ontario↗

USGS1989

Riparian ecosystem creation and restoration: a literature summary

Riparian ecosystems generally compose a minor proportion of surrounding areas, but typically are more structurally diverse and more productive in plant and animal biomass than adjacent upland areas. Riparian areas supply food, cover, and water (especially important in the arid West) for a large diversity of animals, and serve as migration routes and forest connectors between habitats for a variety of wildlife, particularly ungulates and birds. Because riparian ecosystems often are relatively small areas and occur in conjunction with waterways, they are vulnerable to severe alteration. Riparian ecosystems throughout the U.S. have been heavily impacted by man's activities. Riparian ecosystem creation and restoration have been used as mitigation for project impacts from highway, bridge, and pipeline construction; water development; flood control channel modifications; industrial and residential development; agriculture; irrigation; livestock grazing; mining; and accidental habitat loss. Creation of a riparian ecosystem in| a more mesic upland area (e.g., ‘grassland or cropland) adjacent to a river requires appropriate water supply and grading the topography to suitable elevations to support plantings of riparian vegetation. Restoration involves returning the ecosystem to pre disturbance conditions and typically implies revegetation. Removing exotic vegetation or restoring water supplies to pre disturbance level also may be involved. Enhancement of riparian ecosystems commonly refers to improving existing conditions to increase habitat value, usually by increasing plant or community diversity to increase value for wildlife. Managing a riparian ecosystem typically involves enhancement techniques. However, creation and restoration projects often involve use of techniques considered more management-oriented (e.g., fencing to prevent cattle grazing until planted vegetation of a created or restored wetland is established). Protection of an existing riparian ecosystem from impact should be of utmost importance during planning and construction phases of development projects. If loss or damage is unavoidable, wetland creation or restoration can be used as mitigation. Compared to other wetland types (e.g., coastal wetlands), projects and techniques involving creation or restoration of riparian ecosystems are not well documented. For example, only 8% of the records in the WCR Data Base contained information on riparian ecosystems, whereas 31% of the records contained information on coastal emergent or forested ecosystems. To provide a source of currently available literature, riparian information from 92 records (primarily published papers or reports) in the U.S. Fish and Wildlife Service's (FWS) Wetland Creation-Restoration (WCR) Data Base (Schneller-McDonald et al. 1988) was used to develop a literature summary of creation and restoration of riparian ecosystems. The summary provides an overview of the status of riparian ecosystems in the U.S., a discussion of several riparian functions, and a review of some techniques used for planning, implementing, monitoring, and measuring project success of creation-restoration efforts. Case studies of various creation or restoration projects are used to demonstrate these techniques and to report some results of their use. Several well-documented case studies are discussed in detail to illustrate more extensive efforts to plan, implement, or monitor riparian ecosystem creation-restoration projects. For the purpose of this report, riparian ecosystems are defined as landscapes adjacent to drainageways of floodplains that exhibit vegetation, soil, and hydrologic mosaics along topographic and moisture gradients that are distinct from the predominant landscape surface types. Major plant communities are described under palustrine system in Cowardin et al. (1979). Literature from the WCR Data Base was used to provide a summary of riparian ecosystem creation-restoration literature. Thus, information concerning natural systems is not included unless discussed in these articles. This focus allows the reader to compare relative information available on riparian ecosystem creation-restoration efforts. However, this focus also results in limited information in some sections of the report (e.g., Status of Riparian Ecosystems in the U.S.). Individuals involved in riparian ecosystem creation-restoration efforts are encouraged to thoroughly examine available literature on natural and altered systems. Brinson et al. (1981) provide a comprehensive review and synthesis of the ecology and status of riparian ecosystems. Over 500 articles are cited in their 124-page report. Chapters include the following topics: status of riparian ecosystems in the U.S., ecological functions and properties of riparian ecosystems (e.g., geomorphology, primary productivity, nutrient cycling, hydrology), importance of riparian ecosystems to fish and wildlife, and considerations in valuation (ecologic and economic) of riparian ecosystems. Brinson et al. (1981) also discuss management of riparian ecosystems. Riparian ecosystem management literature was not included in the WCR Data Base, unless the article also discussed creation or restoration.

Report↗

USGS2000

Benthic foraminifera and environmental changes in Long Island Sound

Benthic foraminiferal faunas in Long Island Sound (LIS) in the 1940s and 1960s were of low diversity, and dominated by species of the genus Elphidium , mainly Elphidium excavatum clavatum , with common Buccella frigida and Eggerella advena . The distribution of these species was dominantly correlated with depth, but it was not clear which depth-related environmental variable was most important. Differences between faunas collected in 1996 and 1997, and in the 1940s and 1960s include a strong decrease in relative abundance of Eggerella advena over all LIS, an increase in relative abundance of Ammonia beccarii in western LIS, and a decrease in species diversity. The decreased diversity suggests that environmental stress caused the faunal changes. Oxygen isotope data for E. excavatum clavatum indicate that a change in salinity is not a probable cause. Carbon isotope data suggest that the supply of organic matter to the benthos increased since the early 1960s, with a stronger increase in western LIS where algal blooms have occurred since the early 1970s, possibly as a result of nutrient input by waste water treatment plants. These blooms or the resulting episodes of anoxia/hypoxia may have played a role in the increased relative abundance of A. beccarii . There is no clear explanation for the decreased abundance of E. advena , but changes in the phytoplankton composition (thus food supply) are a possible cause. Benthic foraminiferal faunal and stable isotope data have excellent potential as indicators of physicochemical environmental changes and their effects on the biota in LIS.

Connecticut, New York↗

USGS1995

Biodiversity: a new challenge

Resource managers at many state and federal agencies are in the middle of a fundamental change in the practice and objectives of conservation. Traditional management has been directed toward maintaining, usually for harvest purposes, populations of individual species such as ducks, deer, or salmon. Increasingly, however, resource managers are recognizing the critical important of conserving biological diversity, or biodiversity. In its simplest terms, biological diversity is the variety of life at all levels: it includes the array of plants and animals; the genetic differences among individuals; the communities, ecosystems, and landscapes in which they occur; and the variety of processes on which they depend. Conserving biological diversity poses dramatic new problems for comprehensive inventory and monitoring: what should be measured or monitored?

Book chapter↗

USGS2015

Soil ecology of a rock outcrop ecosystem: Abiotic stresses, soil respiration, and microbial community profiles in limestone cedar glades

Limestone cedar glades are a type of rock outcrop ecosystem characterized by shallow soil and extreme hydrologic conditions—seasonally ranging from xeric to saturated—that support a number of plant species of conservation concern. Although a rich botanical literature exists on cedar glades, soil biochemical processes and the ecology of soil microbial communities in limestone cedar glades have largely been ignored. This investigation documents the abiotic stress regime of this ecosystem (shallow soil, extreme hydrologic fluctuations and seasonally high soil surface temperatures) as well as soil physical and chemical characteristics, and relates both types of information to ecological structures and functions including vegetation, soil respiration, and soil microbial community metabolic profiles and diversity. Methods used in this investigation include field observations and measurements of soil physical and chemical properties and processes, laboratory analyses, and microbiological assays of soil samples. Stress factors quantified by this research include shallow soil (depth to bedrock ranging from 2.4 to 22.6 cm), volumetric soil water content levels seasonally ranging from xeric (below 5%) to saturated (above 50%), and seasonally extreme ground-surface temperatures (above 48°C). Findings from this research indicate that spatial and temporal heterogeneity exists in limestone cedar glades in terms of abiotic stress factors and soil physical and chemical properties. Several such soil properties (e.g. soil depth, organic matter levels, pH, and particle size distribution) are spatially correlated. These soil properties were statistically related to ecological structures and functions such as vegetation patterns, soil respiration, the density of culturable heterotrophic microbes in soil and metabolic diversity of soil microbial community profiles. In general, zones within limestone cedar glades that had relatively shallow soil, alkaline pH, low levels of organic matter and high levels of silt also tended to have depressed rates of soil respiration and reduced densities and metabolic diversity of culturable heterotrophic soil microbes. Additionally, seasonally-relevant stress factors including soil water content and temperatures at or near the soil surface were related to the same set of ecological structures and functions.

Tennessee↗

USGS1977

Periphyton and phytoplankton in the Sacramento River, California, May 1972 to April 1973

Periphyton and phytoplankton samples were collected monthly at five sites in the Sacramento River between May 1972 and April 1973. Periphyton were analyzed for species identification and biomass, and phytoplankton were analyzed for species identification and concentrations. The results were used to assess biological water-quality conditions in the river and to compare phytoplankton types and concentrations at three sites with those in 1960-61. Diatoms were the dominant group in both numbers and types of periphyton and phytoplankton. The number of genera and frequency of occurrence of periphyton increased downstream. The periphyton biomass decreased downstream and with succeeding monthly sampling periods. The highest productivity was at site B, below Red Bluff, probably because the Red Bluff Diversion Dam provides optimum conditions for periphyton growth. The decreasing productivity downstream is probably a function of higher sediment concentrations. The periphyton biomass ranged from 0.00 to 0.56 grams per square meter per day throughout the study period. Phytoplankton concentrations and diversity increased downstream. The highest phytoplankton concentration was 980 organisms per milliliter at site D, above Knights Landing, in September. The diversity indices ranged from 0.95 to 3.88 for all sites throughout the study period. Fewer phytoplankton genera were collected in 1972-73 than in 1960-61, but the generic composition was similar. Total phytoplankton concentrations were nearly always higher in 1960-61 than in 1972-73. Green algal concentrations were significantly higher ( p <0.05) at site C and diatoms were significantly higher at all three sites in 1960-61. Blue-green algal concentrations were higher in 1972-73, but differences between the two time intervals were not significant.

California↗