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Vulnerability of larval lamprey to Columbia River hydropower system operations—effects of dewatering on larval lamprey movements and survival

Numbers of adult and juvenile Pacific lamprey ( Entosphenus tridentatus ) in the upper Columbia River Basin of the interior Pacific Northwest have decreased from historical levels (Close and others, 2002), raising concerns f rom State and Federal agencies and Tribal entities. In 1994, the U.S. Fish and Wildlife Service designated Pacific lamprey as a Category 2 candidate species and in 2003, the species was petitioned for listing under the Endangered Species Act. Listing consideration and potential recovery planning are significantly hindered by a lack of information on the basic biology and ecology of lampreys, including limiting factors. To date (2015), several factors that may limit lamprey production require study, including dam passage issues, contaminants, and effects on habitat.

Open-File Report↗

Preliminary results from exploratory sampling of wells for the California oil, gas, and groundwater program, 2014–15

Introduction In 2014 and 2015, the U.S. Geological Survey (USGS) sampled water wells in the Los Angeles Basin and southern San Joaquin Valley, California, and oil wells in the San Joaquin Valley for analysis of multiple chemical, isotopic, and groundwater-age tracers. The purpose of this reconnaissance sampling was to evaluate the utility of tracers for assessing the effects of oil and gas production activities on groundwater quality in California. The study was done in cooperation with the California State Water Resources Control Board. Results of the study are intended to help design a regional groundwater-monitoring program to be implemented as part of California Senate Bill 4 (SB 4 statutes of 2013). The regional monitoring program plans to assess the effects of oil and gas production activities on groundwater quality and to provide a regional context for local monitoring of the groundwater-quality effects from well-stimulation treatments, which are techniques used to improve oil and gas production by increasing their rate of flow to the well. California SB 4 mandates that this local monitoring is to be done by oil-well operators in accordance with monitoring criteria established by the State Water Board. This report evaluates the utility of the chemical, isotopic, and groundwater-age tracers for assessing sources of salinity, methane, and petroleum hydrocarbons in groundwater overlying or near several California oil fields. Tracers of dissolved organic carbon in oil-field-formation water are also discussed. Tracer data for samples collected from 51 water wells and 4 oil wells are examined.

California↗

Evaluation of groundwater and surface-water interactions in the Caddo Nation Tribal Jurisdictional Area, Caddo County, Oklahoma, 2010-13

Streamflows, springs, and wetlands are important natural and cultural resources to the Caddo Nation. Consequently, the Caddo Nation is concerned about the vulnerability of the Rush Springs aquifer to overdrafting and whether the aquifer will continue to be a viable source of water to tribal members and other local residents in the future. Interest in the long-term viability of local water resources has resulted in ongoing development of a comprehensive water plan by the Caddo Nation. As part of a multiyear project with the Caddo Nation to provide information and tools to better manage and protect water resources, the U.S. Geological Survey studied the hydraulic connection between the Rush Springs aquifer and springs and streams overlying the aquifer. The Caddo Nation Tribal Jurisdictional Area is located in southwestern Oklahoma, primarily in Caddo County. Underlying the Caddo Nation Tribal Jurisdictional Area is the Permian-age Rush Springs aquifer. Water from the Rush Springs aquifer is used for irrigation, public, livestock and aquaculture, and other supply purposes. Groundwater from the Rush Springs aquifer also is withdrawn by domestic (self-supplied) wells, although domestic use was not included in the water-use summary in this report. Perennial streamflow in many streams and creeks overlying the Rush Springs aquifer, such as Cobb Creek, Lake Creek, and Willow Creek, originates from springs and seeps discharging from the aquifer. This report provides information on the evaluation of groundwater and surface-water resources in the Caddo Nation Jurisdictional Area, and in particular, information that describes the hydraulic connection between the Rush Springs aquifer and springs and streams overlying the aquifer. This report also includes data and analyses of base flow, evidence for groundwater and surface-water interactions, locations of springs and wetland areas, groundwater flows interpreted from potentiometric-surface maps, and hydrographs of water levels monitored in the Caddo Nation Tribal Jurisdictional Area from 2010 to 2013. Flow in streams overlying the Rush Springs aquifer, on average, were composed of 50 percent base flow in most years. Monthly mean base flow appeared to maintain streamflows throughout each year, but periods of zero flow were documented in daily hydrographs at each measured site, typically in the summer months. A pneumatic slug-test technique was used at 15 sites to determine the horizontal hydraulic conductivity of streambed sediments in streams overlying the Rush Springs aquifer. Converting horizontal hydraulic conductivities (Kh) from the slug-test analyses to vertical hydraulic conductivities (Kv) by using a ratio of Kv/Kh = 0.1 resulted in estimates of vertical streambed hydraulic conductivity ranging from 0.1 to 8.6 feet per day. Data obtained from a hydraulic potentiomanometer in streambed sediments and streams in August 2012 indicate that water flow was from the streambed sediments to the stream (gaining) at 6 of 15 sites, and that water flow was from the stream to the streambed sediments (losing) at 9 of 15 sites. The groundwater and surface-water interaction data collected at the Cobb Creek near Eakly, Okla., streamflow gaging station (07325800), indicate that the bedrock groundwater, alluvial groundwater, and surface-water resources are closely connected. Because of this hydrologic connection, large perennial streams in the study area may change from gaining to losing streams in the summer. The timing and severity of this change from a gaining to a losing condition probably is affected by the local or regional withdrawal of groundwater for irrigation in the summer growing season. Wells placed closer to streams have a greater and more immediate effect on alluvial groundwater levels and stream stages than wells placed farther from streams. Large-capacity irrigation wells, even those completed hundreds of feet below land surface in the bedrock aquifer, can induce surface-water flow from nearby streams by lowering alluvial groundwater levels below the stream altitude. Twenty-five new springs visible from public roads and paths were documented during a survey of springs in 2011. Most of the springs are in upland draws on the flanks of topographic ridges. Wetlands primarily were identified by using a combination of data sources including the National Wetlands Inventory, Soil Survey Geographic database frequently flooded soils maps, and aerial photographs. Regional flow directions were determined by analysis of water levels measured in 29 wells completed in the Rush 2 Springs aquifer in Caddo County and the Caddo Nation Tribal Jurisdictional Area. Water levels were monitored every 30 minutes in five wells by using a vented pressure transducer and a data-collection platform with real-time transmitting equipment in each well. Those five wells ranged in depth from 210 to 350 feet. Water levels in these five wells indicate that there was a decrease in water storage in the Rush Springs aquifer from October 2010 to June 2013.

Oklahoma↗

Methods for estimating flow-duration curve and low-flow frequency statistics for ungaged locations on small streams in Minnesota

Knowledge of the magnitude and frequency of low flows in streams, which are flows in a stream during prolonged dry weather, is fundamental for water-supply planning and design; waste-load allocation; reservoir storage design; and maintenance of water quality and quantity for irrigation, recreation, and wildlife conservation. This report presents the results of a statewide study for which regional regression equations were developed for estimating 13 flow-duration curve statistics and 10 low-flow frequency statistics at ungaged stream locations in Minnesota. The 13 flow-duration curve statistics estimated by regression equations include the 0.0001, 0.001, 0.02, 0.05, 0.1, 0.25, 0.50, 0.75, 0.9, 0.95, 0.99, 0.999, and 0.9999 exceedance-probability quantiles. The low-flow frequency statistics include annual and seasonal (spring, summer, fall, winter) 7-day mean low flows, seasonal 30-day mean low flows, and summer 122-day mean low flows for a recurrence interval of 10 years. Estimates of the 13 flow-duration curve statistics and the 10 low-flow frequency statistics are provided for 196 U.S. Geological Survey continuous-record streamgages using streamflow data collected through September 30, 2012. The study area includes 196 streamgages located within Minnesota and 50 miles beyond the State’s borders in North Dakota, South Dakota, Iowa, and Wisconsin. The study area was divided into five regions that were developed in a previous study using the concept of hydrologic landscape units. Geographic information system software was used to calculate 18 characteristics investigated as potential explanatory variables in regression analyses for each streamgage drainage basin. Trend analyses indicated statistically significant trends in summer 7-day low flows that were not related to precipitation patterns for 19 streamgages. For 16 of these streamgages, the streamflow record was subset using structural change analysis to identify the most recent period of record without a significant trend. The three remaining streamgages with significant trends were excluded from the final analysis because the effective period of record without a significant trend was less than 10 years. Because several streams in this study have zero flow as their minimum reported flow, weighted left-censored regression was used to analyze the flow data in an unbiased manner, with weights based on the number of years of record. A total of 115 regression equations were developed in this study to calculate flow-duration curve and low-flow frequency statistics for ungaged locations in the study area. In addition, data from 25 pairs of streamgages were used to develop drainage-area ratio equations that can be used to estimate streamflow statistics at ungaged locations on streams that have a streamgage in another location. Streamflow statistics estimated using regional regression and drainage-area ratio equations were compared among regions. For regions A, D, and E, drainagearea ratio equations were more accurate than regional regression equations for flows, but regional regression equations were more accurate for high flows. For region F, regional regression equations were consistently more accurate than drainage-area ratio equations. For region BC, the pattern in accuracies of regional regression and drainage-area ratio equations between low flows and high flows was not consistent. Equations developed in this study apply only to stream locations where flows are not substantially affected by regulation, diversion, or urbanization. All equations presented in this study will be incorporated into StreamStats, a web-based geographic information system tool developed by the U.S. Geological Survey. StreamStats allows users to obtain streamflow statistics, basin characteristics, and other information for user-selected locations on streams through an interactive map.

Iowa, Minnesota, North Dakota, South Dakota, Wisco↗

Final report: Initial ecosystem response of salt marshes to ditch plugging and pool creation: Experiments at Rachel Carson National Wildlife Refuge (Maine)

This study evaluates the response of three salt marshes, associated with the Rachel Carson National Wildlife Refuge (Maine), to the practice of ditch plugging. Drainage ditches, originally dug to drain the marsh for mosquito control or to facilitate salt hay farming, are plugged with marsh peat in an effort to impound water upstream of the plug, raise water table levels in the marsh, and increase surface water habitat. At two study sites, Moody Marsh and Granite Point Road Marsh, ditch plugs were installed in spring 2000. Monitoring of hydrology, vegetation, nekton and bird utilization, and marsh development processes was conducted in 1999, before ditch plugging, and then in 2000 and 2001 (all parameters except nekton), after ditch plugging. Each study site had a control marsh that was monitored simultaneously with the plugged marsh, and thus, we employed a BACI study design (before, after, control, impact). A third site, Marshall Point Road Marsh, was plugged in 1998. Monitoring of the plugged and control sites was conducted in 1999 and 2000, with limited monitoring in 2001, thus there was no ?before? plug monitoring. With ditch plugging, water table levels increased toward the marsh surface and the areal extent of standing water increased. Responding to a wetter substrate, a vegetation change from high marsh species (e.g., Spartina patens) to those more tolerant of flooded conditions (e.g., Spartina alterniflora) was noted at two of the three ditch plugged sites. Initial response of the nekton community (fishes and decapod crustaceans) was evaluated by monitoring utilization of salt marsh pools using a 1m2 enclosure trap. In general, nekton species richness, density, and community structure remained unchanged following ditch plugging at the Moody and Granite Point sites. At Marshall Point, species richness and density (number of individuals per m2) were significantly greater in the experimental plugged marsh than the control marsh (<2% of the control marsh was open water habitat vs. 11% of the plugged marsh). The response of birds, categorized as waterfowl & waterbirds, shorebirds & wading birds, gulls & terns, and miscellaneous (raptors, passerines, other), was variable. Following ditch plugging, bird species richness increased at the Granite Point site (1999 pre-plug = 15.4, 2000 post-plug = 26.2, 2001 post-plug = 38.7). Because of a low sample size at Moody Marsh, reliable statements on species richness cannot be made. Density of birds (no. of birds per ha) remained unchanged with ditch plugging at Granite Point Marsh, although there was a strong, but not statistically significant, trend toward increased density. This study only reports on initial responses of marsh functions to ditch plugging. Monitoring should continue at these sites, and perhaps at additional sites, for the next decade or so. A monitoring plan is recommended. Long-term monitoring will include evaluation of salt marsh development processes using SET (surface elevation table) methodology. There is concern, although not confirmed, that as ditch-plugged marshes become wetter and marsh grass production declines their ability to keep pace with sea level rise could be jeopardized. It is suggested that ditch plugging should be considered an experimental marsh management technique. Additional monitoring on the physical and habitat responses of ditch-plugged marshes is required, along with assessments of other techniques aimed at restoring open water habitat to the marsh surface.

Book↗

Management-driven science synthesis: An evaluation of Everglades restoration trajectories

The Synthesis of Everglades Restoration andEcosystem Services (SERES) Project was funded in 2010 by the U.S. Department of Interior (DOI) through the Critical Ecosystem Studies Initiative (CESI) and established to synthesize the ever-growing body of Everglades scientific information with the goal of addressing topics that have hampered restoration since the Comprehensive Everglades Restoration Plan (CERP) was passed in 2000. A distinguishing characteristic of this synthesis effort was that the target end-user was a management/ decision-maker audience. Specifically, the aim was to address the questions of the water managers and other decision leaders in a way that would illuminate and inform but not constrain or specify decisions. Since its inception, the SERES Project has been managed by the Everglades Foundation; however, a core group of scientifc experts from agencies, academic institutions, and the private sector have contributed to the project (see list on page 4). We began the project by interviewing key officials, including resource managers, decision-makers, and heads of agencies and environmental organizations. The objective of these interviews was to establish the Key Science Management Questions that needed to be addressed in order to advance restoration of the Everglades. The resulting questions led to the organization of project teams focused on Hydrology, Water Quality, Soils, Trophic Dynamics, and Landscape Pattern. In order to establish the technical basis for the project, we conducted in depth reviews of the recent scientifc literature, evaluation tools and models, and available data in each of these core areas. Finally, we developed a suite of restoration options that would aid us in addressing the Key Questions and evaluated their relative performance from hydrological, ecological, and economic perspectives. General fndings of the SERES Project are described in subsequent sections, and technical reviews and results of analyses supporting this document are available in reports on the project website.

Florida↗

Changes in nitrogen loading to the Northeast Creek Estuary, Bar Harbor, Maine, 2000 to 2010

Since 1999, the U.S. Geological Survey and the National Park Service have been monitoring land use and nitrogen loading in a 26.3-square-kilometer (10-square-mile) estuarine watershed at Acadia National Park, Mount Desert Island, Maine. The initial study linking land use and nitrogen loads entering the Northeast Creek estuary was completed in 2000, and findings were used to develop simulations of nitrogen loading to the estuary, thereby helping to inform local land-use planning decisions. At that time, the amount of nitrogen entering the Northeast Creek estuary was relatively small, and no evidence of nutrient-related degradation was observed in the Ruppia -dominated estuarine ecosystem. A new round of water-quality monitoring and streamflow measurements was conducted to determine nitrogen loading from 2008 to 2011 as a means to evaluate the effects of increased rural residential housing within the watershed since 2000. On the basis of a 2.6-percent increase in residential-housing land use in the watershed from 2000 to 2010, simulations of nitrogen export predicted a 7-percent increase in nitrogen loading to Northeast Creek. The measurement-based loads estimated for the Northeast Creek tributaries, however, increased much more than predicted, from 1.89 kilograms per hectare per year (kg/ha/yr) in 2000 to 3.12 kg/ha/yr in the time period centered on 2010—a 66-percent increase. This increase is likely primarily a result of the prevalence of much wetter conditions during the 2008–11 sampling period than during the earlier sampling period. In addition to increasing the physical transport of nitrogen in the watershed, wet climatic conditions have been shown in other studies to increase the rates of biotic and abiotic processes that control nitrogen export from northern-latitude forested watersheds. The new loading estimates, however, also support the possibility that some portion of the increase in nitrogen loading results from the observed land-use changes, and that the increase in residential housing has, in fact, contributed to the observed increase in nitrogen loading.

Maine↗

Integrated rangeland fire management strategy actionable science plan completion assessment—Fire topic, 2015–20

Loss and degradation of sagebrush rangelands due to an accelerated invasive annual grass-wildfire cycle and other stressors are significant management, conservation, and economic issues in the western United States. These sagebrush rangelands comprise a unique biome spanning 11 states, support over 350 wildlife species, and provide important ecosystem services that include stabilizing the economies of western communities. Impacts to sagebrush ecosystem processes over large areas due to the annual grass-wildfire cycle necessitated the development of a coordinated, science-based strategy for improving efforts to achieve long-term protection, conservation, and restoration of sagebrush rangelands, which was framed in 2015 under the Integrated Rangeland Fire Management Strategy (IRFMS). Central to this effort was the development of an Actionable Science Plan (Plan) that identified 37 priority science needs (Needs) for informing the actions proposed under the 5 topics (Fire, Invasives, Restoration, Sagebrush and Sage-Grouse, Climate and Weather) that were part of the collective focus of the IRFMS. Notable keys to this effort were identification of the Needs co-produced by managers and researchers, and a focus on resulting science being “actionable.” Substantial investments aimed at fulfilling the Needs identified in the Plan have been made since its release in 2016. While the state of the science has advanced considerably, the extent to which knowledge gaps remain relative to identified Needs is relatively unknown. Moreover, new Needs have likely emerged since the original strategy as results from actionable science reveal new questions and possible (yet untested) solutions. A quantifiable assessment of the progress made on the original science Needs can identify unresolved gaps and new information that can help inform prioritization of future research efforts. This report details a systematic literature review that evaluated how well peer-reviewed journal articles and formal technical reports published between January 1, 2015, and December 31, 2020, addressed eight needs (hereinafter known as “Needs”) identified under the Fire topic in the Plan, defined as any non-structure fire that occurs in vegetation or natural fuels, including wildfires and prescribed fires. The topic outlined research Needs broadly focused on understanding the mechanisms and management of threats posed to the maintenance of large, contiguous sagebrush rangelands by fire. We established the level of progress towards addressing each Need following a standardized set of criteria, and developed summaries detailing how research objectives nested within Needs identified in the Plan (‘Next Steps’) were either addressed well, partially addressed or remain outstanding (in other words., addressed poorly) in the literature through 2020. Our searches resulted in the inclusion of 156 science products that at least partially addressed a Need identified in the Fire topic. The Needs that were well and partially addressed included: studies of relationships between fire and the sagebrush ecosystem (Need 1) investigations of the responses of sage-grouse to burned area characteristics (Need 2); spatial modeling of fire risk (Need 3); studies of the effects of fuels management treatments (Need 4); sagebrush reduction treatments on multiple characteristics of the sagebrush ecosystem (Need 6); and assessments of the role of fire in maintaining healthy sagebrush communities (Need 7). Needs addressed poorly included: assessments of the effects of fuel breaks on sage-grouse (Need 5); and investigations of characteristics associated with the effectiveness of fuel breaks (Need 8). The information provided in this assessment will assist updating the Plan along with other science strategies.

western United States↗

Acidic Depositions: Effects on Wildlife and Habitats

The phenomenon of 'acid rain' is not new; it was recognized in the mid-1800s in industrialized Europe. In the 1960s a synthesis of information about acidification began in Europe, along with predictions of ecological effects. In the U.S. studies of acidification began in the 1920s. By the late 1970s research efforts in the U.S. and Canada were better coordinated and in 1980 a 10-year research program was undertaken through the National Acid Precipitation Assessment Plan (NAPAP) to determine the causes and consequences of acidic depositions. Much of the bedrock in the northeastern U.S. and Canada contains total alkalinity of <200 ?eq 1-1, thus, it lacks acid-neutralizing capacity. In the U.S. about 5% of the land area and in Canada about 43 % of the land area is sensitive to acidic depositions. Further, these areas receive >20 kg/ha/yr of wet sulphate depositions and are vulnerable to acidifying processes. Acidic depositions contribute directly to acidifying processes of soil and soil water. Soils must have sufficient acid-neutralizing capacity or acidity of soil will increase. Natural soil-forming processes that lead to acidification can be accelerated by acidic depositions. Long-term effects of acidification are predicted, which will reduce soil productivity mainly through reduced availability of nutrients and mobilization of toxic metals. Severe effects may lead to major alteration of soil chemistry, soil biota, and even loss of vegetation. Several species of earthworms and several other taxa of soil-inhabiting invertebrates, which are important food of many vertebrate wildlife species, are affected by low pH in soil. Loss of canopy in declining sugar maples results in loss of insects fed on by certain neotropical migrant bird species. No definitive studies categorically link atmospheric acidic depositions with direct or indirect effects on wild mammals. Researchers have concentrated on vegetative and aquatic effects. Circumstantial evidence suggests that effects are probable for certain species of aquatic-dependent mammals (water shrew, mink, and otter) and that these species are at risk from the loss of foods or contamination of these foods by metals, especially methylmercury. Continued acidification of terrestrial habitats, to the extent that earthworm populations are broadly reduced, might expose some fossorial mammalian species to risk because of decline in their major prey species. Acidic deposition affects primarily aquatic habitats of avian species by disrupting food webs (ecological effects) and increasing amounts of available heavy metals (mercury, aluminum, cadmium) in prey of avian species (toxicological effects). The ecological effects of acidifying wetlands are to reduce acid-intolerant prey (invertebrates) and to change prey quality from high-calcium bearing prey to low-calcium bearing prey. The toxicological effects are to increase contamination by heavy metals, especially methylated mercury, in foods of breeding waterbirds. The combination of these 2 types of effects results in potentially lower survival of adults and reduced production, growth, or survival of young of many bird species. Effects of acidification on herpteofauna and their habitats are mainly reproductive failure of susceptible species and reduced or metal-contaminated foods for both amphibians and reptiles.

Wildlife Society Technical Review↗

Climate-adaptive urban planning: Quantitative assessment of drought impacts and practical strategies for climate-resilient urban green spaces

Urban green spaces (UGSs) are vital for enhancing a city’s resilience and livability; however, their functionality is increasingly jeopardized by drought, particularly in water-scarce regions. This study evaluates drought impact on UGSs in Metropolitan Adelaide, Australia, a representative semi-arid urban system, using satellite-derived Normalized Difference Vegetation Index (NDVI) time-series data spanning 2000–2020. Vegetation dynamics were analyzed through Seasonal-Trend decomposition using Loess (STL), standardized anomaly assessment, lagged Pearson correlation, Ordinary Least Squares (OLS) regression, and Mann–Kendall trend analysis. To isolate climatically sensitive signals, 29 urban lawn patches were examined separately from mixed urban canopy, given their shallow root systems and direct dependence on surface moisture. NDVI declined by approximately 0.09 units during the Millennium Drought (2001–2009), with summer greenness deficits reaching 24% below the 20-year benchmark. Temperature was the dominant driver of lawn NDVI variability (r = −0.863, R 2 = 74.5%), substantially exceeding the effect of rainfall (r = 0.156, R 2 = 2.4%). El Niño–Southern Oscillation (ENSO) cycles modulated vegetation responses, with La Niña years supporting recovery and El Niño years amplifying decline. Post-drought recovery remained incomplete, with NDVI deficits of 8–20% persisting through 2020; full recovery was observed only in 2017, coinciding with the highest recorded summer rainfall. No significant directional trend was detected over the full study period (Mann–Kendall τ = 0.005, p = 0.908). These findings demonstrate that heat, rather than water limitation alone, is the primary driver of vegetation stress in urban systems, highlighting the benefits of integrated management strategies that address both warming and moisture deficits to sustain urban green infrastructure under future climate conditions. We introduce the concept of “urban greenery drought,” referring to a form of vegetation stress in managed urban landscapes where greenness is reduced primarily by elevated temperature and atmospheric demand despite water availability.

Adelaide↗

Ambient quality of ground water in the vicinity of Naval Submarine Base Bangor, Kitsap County, Washington, 1995

A study of the ambient ground-water quality in the vicinity of Naval Submarine Base (SUBASE) Bangor was conducted to provide the U.S. Navy with background levels of selected constituents. The Navy needs this information to plan and manage cleanup activities on the base. During March and April 1995, 136 water-supply wells were sampled for common ions, trace elements, and organic compounds; not all wells were sampled for all constituents. Man-made organic compounds were detected in only two of fifty wells, and the sources of these organic compounds were attributed to activities in the immediate vicinities of these off-base wells. Drinking water standards for trichloroethylene, iron, and manganese were exceeded in one of these wells, which was probably contaminated by an old local (off-base) dump. Ground water from wells open to the following hydrogeologic units (in order from shallow to deep) was investigated: the Vashon till confining unit (Qvt, three wells); the Vashon aquifer (Qva, 54 wells); the Upper confining unit (QC1, 16 wells); the Permeable interbeds within QC1 (QC1pi, 34 wells); and the Sea-level aquifer (QA1, 29 wells).The 50th and 90th percentile ambient background levels of 35 inorganic constituents were determined for each hydrogeologic unit. At least ten measurements were required for a constituent in each hydrogeologic unit for determination of ambient background levels, and data for three wells determined to be affected by localized activities were excluded from these analyses. The only drinking water standards exceeded by ambient background levels were secondary maximum contaminant levels for iron (300 micrograms per liter), in QC1 and QC1pi, and manganese (50 micrograms per liter), in all of the units. The 90th percentile values for arsenic in QC1pi, QA1, and for the entire study area are above 5 micrograms per liter, the Model Toxics Control Act Method A value for protecting drinking water, but well below the maximum contaminant level of 50 micrograms per liter for arsenic. The manganese standard was exceeded in 38 wells and the standard for iron was exceeded in 12 wells. Most of these wells were in QC1 or QC1pi and had dissolved oxygen concentrations of less than 1 milligram per liter and dissolved organic carbon concentrations greater than 1 milligram per liter. The dissolved oxygen concentration is generally lower in the deeper units, while pH increases; the recommended pH range of 6.5-8.5 standard units was exceeded in 9 wells. The common-ion chemistry was similar for all of the units.

Washington↗

Fluvial delivery and wave resuspension of sediment in a sheltered, urbanized Pacific Northwest estuary

The sequence and timing of sediment delivery and redistribution in coastal systems is important for shoreline stability, ecosystem services, and remediation planning. In temperate estuaries, understanding the role of fluvial sediment delivery and dispersal relative to wind and wave remobilization processes is particularly important to address the fate of contaminants, many of which adsorb to fine particles, and to assess changes in coastal systems under projected changes in climate. Here we present an integrated analysis of observations at multiple timescales to evaluate sediment dynamics and the sedimentary coupling between fluvial and oceanographic processes within Bellingham Bay, Washington, USA, an urban estuary. Time-series data of currents, waves, and turbidity at four moorings along with geochemical data from grab samples and cores of seabed sediment from across the bay are contrasted with the dynamics of the Nooksack River, its fluvial sediment source. Even during large (5-yr return interval) river-flood events, water-column suspended-sediment concentration (SSC) near the bed on the outer delta topset was not correlated with Nooksack River runoff and was instead closely correlated with local wind-wave height. In contrast, near-surface SSC was strongly correlated with fluvial discharge, suggesting intense water-column suspended-sediment stratification during flood events. Grain-size and geochemical ( 7 "> 7 Be and excess 210 "> 210 Pb) results from seabed-sediment samples and historical bathymetric measurements of the subaqueous Nooksack River delta reveal spatial gradients of fluvial and wave influence and sediment-accumulation rates. Analysis of historical bathymetric surveys of the Nooksack River delta combined with the geochemical data reveal that about 75% of the fluvial sediment load can be accounted for in the Bellingham Bay receiving system. Studies of this type in urbanized coastal settings can help address ecological and geological questions regarding the risks from contaminants associated with fine-grained sediment, predict longer-term delta morphological evolution, and inform managers planning future coastal restoration efforts

Washington↗

Seismic hazards and land-use planning

Basic earth-science data are necessary for a realistic assessment of seismic hazards and as a basis for limiting corrective land-use controls only to those areas of greatest hazard. For example, the location, character, and amount of likely displacement and activity of surface faulting can be predicted if detailed geologic maps and seismic data are available and are augmented by field studies at critical localities. Because few structures can withstand displacement of their foundations, they should be located off active fault traces, the distance varying with the character of faulting, the certainty with which fault traces are known, and the importance of the structure. Recreational activities and other nonoccupancy land uses should be considered for fault zone areas where land is under pressure for development; elsewhere, such areas should remain as open space. Two methods of predicting ground shaking effects have applications to land-use decisions: (1) Relative earthquake effects can be related to firmness of the ground and can be used in a gross way to allocate population density in the absence of more sophisticated analyses; and (2) intensity maps, based on, (a) damage from former earthquakes, or (b) a qualitative analyses of geologic units added to a design earthquake, can be helpful both for general and specific plans. Theoretical models are used with caution to predict ground motion for critical structures to be located at specific sites with unique foundation conditions. Fully adequate methods of assessing possible shaking remain to be developed. Where land-use decisions do not reflect likely ground shaking effects, stringent building codes are needed, particularly for important structures. Ground failure (landsliding, ground cracking and lurching, differential settlement, sand boils, and subsidence) commonly results from liquefaction, loss of soil strength, or compaction. Areas suspected of being most likely to fail should not be developed unless detailed site studies can demonstrate the hazard does not exist or can be overcome. Various methods can be used to reduce the high, long-term public costs that follow development of unstable ground. However, areas subject to tectonic deformation generally cannot be predicted nor can effects of such deformation be minimized. Large water waves, such as produced by tsunamis, seiches, and dam failure or overtopping, can be anticipated in many places. Their effects can be lessened by land-use regulations similar to flood-plain zoning, restrictions on location of critical structures, and appropriate warning systems. Many local, state, and federal government agencies, universities, and private consultants may be able to assist planners by advising them of pertinent data and where those data can be obtained. Interpretation of the data for an evaluation of seismic risk commonly requires a team of planners, geologists, and soil and structural engineers.

Circular↗

Dynamic modeling of coastal compound flooding hazards due to tides, extratropical storms, waves, and sea-level rise: A case study in the Salish Sea, Washington (USA)

The Puget Sound Coastal Storm Modeling System (PS-CoSMoS) is a tool designed to dynamically downscale future climate scenarios (i.e., projected changes in wind and pressure fields and temperature) to compute regional water levels, waves, and compound flooding over large geographic areas (100 s of kilometers) at high spatial resolutions (1 m) pertinent to coastal hazard assessments and planning. This research focuses on advancing robust and computationally efficient approaches to resolving the coastal compound flooding components for complex, estuary environments and their application to the Puget Sound region of Washington State (USA) and the greater Salish Sea. The modeling system provides coastal planners with projections of storm hazards and flood exposure for recurring flood events, spanning the annual to 1-percent annual chance of flooding, necessary to manage public safety and the prioritization and cost-efficient protection of critical infrastructure and valued ecosystems. The tool is applied and validated for Whatcom County, Washington, and includes a cross-shore profile model (XBeach) and overland flooding model (SFINCS) and is nested in a regional tide–surge model and wave model. Despite uncertainties in boundary conditions, hindcast simulations performed with the coupled model system accurately identified areas that were flooded during a recent storm in 2018. Flood hazards and risks are expected to increase exponentially as the sea level rises in the study area of 210 km of shoreline. With 1 m of sea-level rise, annual flood extents are projected to increase from 13 to 33 km 2 (5 and 13% of low-lying Whatcom County) and flood risk (defined in USD) is projected to increase fifteenfold (from 14 to USD 206 million). PS-CoSMoS, like its prior iteration in California (CoSMoS), provides valuable coastal hazard projections to help communities plan for the impacts of sea-level rise and storms.

Washington↗

Improving ecological data science with workflow management software

Pressing environmental research questions demand the integration of increasingly diverse and large-scale ecological datasets as well as complex analytical methods, which require specialized tools and resources. Computational training for ecological and evolutionary sciences has become more abundant and accessible over the past decade, but tool development has outpaced the availability of specialized training. Most training for scripted analyses focuses on individual analysis steps in one script rather than creating a scripted pipeline, where modular functions comprise an ecosystem of interdependent steps. Although current computational training creates an excellent starting place, linear styles of scripting can risk becoming labor- and time-intensive and less reproducible by often requiring manual execution. Pipelines, however, can be easily automated or tracked by software to increase efficiency and reduce potential errors. Ecology and evolution would benefit from techniques that reduce these risks by managing analytical pipelines in a modular, readily parallelizable format with clear documentation of dependencies. Workflow management software (WMS) can aid in the reproducibility, intelligibility and computational efficiency of complex pipelines. To date, WMS adoption in ecology and evolutionary research has been slow. We discuss the benefits and challenges of implementing WMS and illustrate its use through a case study with the targets r package to further highlight WMS benefits through workflow automation, dependency tracking and improved clarity for reviewers. Although WMS requires familiarity with function-oriented programming and careful planning for more advanced applications and pipeline sharing, investment in training will enable access to the benefits of WMS and impart transferable computing skills that can facilitate ecological and evolutionary data science at large scales.

Methods in Ecology and Evolution↗

Reducing uncertainty in climate change responses of inland fishes: A decision-path approach

Climate change will continue to be an important consideration for conservation practitioners. However, uncertainty in identifying appropriate management strategies, particularly for understudied species and regions, constrains the implementation of science-based solutions and adaptation strategies. Here, we share a decision-path approach to reduce uncertainty in climate change responses of inland fishes to inform conservation and adaptation planning. With the Fish and Climate Change database (FiCli), a comprehensive, online, public database of peer-reviewed literature on documented and projected climate impacts to inland fishes, users can identify relevant studies and associated management recommendations via geographic regions, response types (i.e., fish assemblage dynamics, demographic, distributional, evolutionary, phenological), fish taxa, and traits (e.g., thermal guilds, feeding type, parental care, habitat type) and use a suite of summary tools to make more informed decisions. For both data-rich and data-poor scenarios, we demonstrate that this approach can reduce uncertainty in understanding climate change responses. Using thermal sensitivity as an example, we also establish the utility of FiCli database to address other user-defined, management-relevant questions via supplementary analyses. This decision-path approach can be applied to rapid assessments, management decisions, and policy development and may serve as a model for other conservation decision-making processes.

Conservation Science and Practice↗

Landscape geomorphology and local-riverine features influence Broad Whitefish (Coregonus nasus) spawning habitat suitability in Arctic Alaska

Landscape-level geomorphic processes influence the spatial and temporal arrangement of fish habitats in freshwater ecosystems and fishes move across riverscapes, selecting a suite of habitats to maximise fitness. Here, we explore the influence of geomorphology on stream channel attributes and assess Broad Whitefish ( Coregonus nasus ) spawning habitat potential in the Colville River in Arctic Alaska. Using high-resolution digital surface models (5 m 2 ), we quantified the stream network extent and summarised channel habitat attributes continuously across the drainage network. Next, we developed an intrinsic potential (IP) model for Broad Whitefish by using geomorphic channel parameters previously understood to be associated with spawning habitats (channel width, median substrate size and channel braiding) to estimate the potential of streams across the Colville River watershed to provide spawning habitat. Our model results show the majority of habitat with high IP (≥0.6) was located within the braided sections of the main channel, which encompass >1548 km, but only 2% of the total channel network. The IP model was tested by tracking radio-tagged Broad Whitefish using aerial surveys. Prespawn fish moved into the watershed starting mid-July and mostly used habitat with moderate to very high IP in the middle and lower watershed. Several individuals were relocated in smaller multichannels with vegetated bars that contained very low IP (≤0.2), suggesting that other factors, such as hyporheic flow, may also influence spawning habitat selection. Our study demonstrates that IP modelling offers a useful method to quantify spawning habitat potential in data-poor riverscapes, providing useful information for managers to assess potential anthropogenic impacts and develop conservation plans to protect essential Broad Whitefish habitat.

Alaska↗