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At least 1,351 records · Page 75Linked to original sources
USGS1970

Hydrologic effects of floodwater-retarding structures on Garza-Little Elm Reservoir, Texas

The Texas District of the Water Resources Division of the U.S. Geological Survey has collected and analyzed hydrologic data since 1953 to define the effects of systems of floodwater-retarding structures on downstream water and sediment yield. The district project includes 11 study areas ranging from 18 to 80 square miles in size and from 0 to 67 in percent of study area controlled by floodwaterretarding structures. The 11 study areas are within that part of Texas where the west-to-east average annual runoff ranges from about 2 to 7 inches. This report presents results of analyses, development of methodolgy, and results of application of methods for defining the downstream effects of systems of floodwaterretarding structures. Annual inflow to and outflow from the system of floodwater-retarding reservoirs in seven of the 11 study areas were found to be related by the equation: O=0.98/ 0.68, where O is annual outflow, in inches, and / is annual net inflow, in inches. Transmission loss of structure outflow to the downstream study-area stream-gaging station was determined and compared with the transmission loss of natural flood flow between tandem stream-gaging stations on Denton Creek, a tributary to Elm Fork Trinity River above Dallas. Trap efficiency of most floodwater-retarding structures was found by the U.S. Soil Conservation Service to be about 97 percent. Downstream increases in suspended-sediment concentration in the outflow were found to be large in a study area with mostly silt and clay sediments, but even a large increase in suspendedsediment concentration did not represent a significant quantitative pickup of sediment by the outflow water. Water consumption in floodwater-retarding reservoirs from the combined actions of evaporation, evapotranspiration, and seepage was found to be as much as twice the average annual consumption attributable to evaporation alone. Average annual consumption in reservoirs in the seven study areas analyzed ranged from 1.57 inches of equivalent runoff in the easternmost study area, where annual runoff averaged 6.96 inches, to 0.77 inch of equivalent runoff in the westernmost study area, where the average annual runoff was 2.35 inches. The effect of consumption on downstream flow is partially offset by rainfall on pool surface. Studies covering as much as 15 years of streamflow record at the stream-gaging stations that gage outflow from the Deep and Honey Creek study areas indicated no increase in base flow. Multiple-linear-regression techniques were used in developing methodology to determine reservoir consumption in seven study areas. The physical and climatic fnctors influencing consumption were grouped as variables in regard to their relative effect on the actions of evaporation, evapotranspiration, and seepage. The resulting generalized equation was then used in synthesizing the consumptive effects of a planned system of 162 floodwater-retarding reservoirs controlling 26 percent of a 1,660-square-mile drainage basin upstream from a major water-supply reservoir. The analyses were based on the assumption that all water consumed at the floodwater-retarding reservoirs would have reached the downstream watersupply reservoir. Water-sediment discharge relationships were derived for the runoff into the structures as well as for the runoff through and below the structures. A mathematical response model of the floodwater-retarding reservoir systems and the entire drainage basin was computer programed to yield monthly water and sediment inflow to the water-supply reservoir. Results of the response model showed that with full development, depletion of annual yield to the large reservoir would be as much as 10 percent in the early years; but after the permanent pools of the floodwater-retarding structures had mostly filled with sediment, depletion of annual yield would be generally less than 1 percent. The depletion of yield to Garza-Little Elm Reservoir during the 39-year synthesized period of study was estimated as 296,800 acre-feet out of 18,256,000 acre-feet total yield. During the same period, the floodwater-retarding structures were estimated to have kept 19,700 acre-feet of sediment from being deposited in the reservoir. "Firm"- or "critical"-yield studies were made of the large reservoir on the basis of two sets of conditions : with floodwater-retarding structures in the drainage basin, and without such structures. Results of the firm-yield studies indicated that with full development, annual firm yield would be initially reduced by 10 percent. After 30 or more years, when the permanent pools of the floodwaterretarding reservoirs would be mostly filled with sediment, the firm yield would be almost the same with or without the upstream development.

Texas↗
USGS2023

Monkeypox virus in animals: Current knowledge of viral transmission and pathogenesis in wild animal reservoirs and captive animal models

Mpox, formerly called monkeypox, is now the most serious orthopoxvirus (OPXV) infection in humans. This zoonotic disease has been gradually re-emerging in humans with an increasing frequency of cases found in endemic areas, as well as an escalating frequency and size of epidemics outside of endemic areas in Africa. Currently, the largest known mpox epidemic is spreading throughout the world, with over 85,650 cases to date, mostly in Europe and North America. These increased endemic cases and epidemics are likely driven primarily by decreasing global immunity to OPXVs, along with other possible causes. The current unprecedented global outbreak of mpox has demonstrated higher numbers of human cases and greater human-to-human transmission than previously documented, necessitating an urgent need to better understand this disease in humans and animals. Monkeypox virus (MPXV) infections in animals, both naturally occurring and experimental, have provided critical information about the routes of transmission; the viral pathogenicity factors; the methods of control, such as vaccination and antivirals; the disease ecology in reservoir host species; and the conservation impacts on wildlife species. This review briefly described the epidemiology and transmission of MPXV between animals and humans and summarizes past studies on the ecology of MPXV in wild animals and experimental studies in captive animal models, with a focus on how animal infections have informed knowledge concerning various aspects of this pathogen. Knowledge gaps were highlighted in areas where future research, both in captive and free-ranging animals, could inform efforts to understand and control this disease in both humans and animals.

Viruses↗
USGS1993

Monitoring and research at Walnut Creek National Wildlife Refuge

Walnut Creek National Wildlife Refuge-Prairie Learning Center (Walnut Creek or the Refuge) is one of the newest additions to the National Wildlife Refuge System, which consists of over 480 units throughout the United States operated by the U.S. Department of the Interior, Fish and Wildlife Service (the Service). Located about 20 miles east of Des Moines, Iowa, the Refuge has an approved acquisition boundary containing 8,654 acres (Figure 1). Acquisition is from willing sellers only, and to date the Service has purchased approximately 5,000 acres. The acquisition boundary encompasses about 43% of the watershed of Walnut Creek, which bisects the Refuge and drains into the Des Moines River to the southeast. Approximately 25%-30% of the Walnut Creek watershed is downstream of the Refuge. As authorized by Congress in 1990, the purposes of the Refuge are to (U.S. Fish and Wildlife Service 1992): • restore native tallgrass pairie, wetland, and woodland habitats for breeding and migratory waterfowl and resident wildlife; • serve as a major environmental education center providing opportunities for study; • provide outdoor recreation benefits to the public; and • provide assistance to local landowners to improve their lands for wildlife habitat. To implement these purposes authorized by Congress, the Refuge has established the goal of recreating as nearly as possible the natural communities that existed at the time of settlement by Euro-Americans (circa 1840). Current land use is largely agricultural, including 69% cropland, 17% grazed pasture, and 7.5% grassland (dominantly brome) enrolled in the Conservation Reserve Program). About 1,395 acres of relict native communities also exist on the Refuge, including prairie (725 acres), oak savanna and woodland (450 acres), and riparian or wetland areas (220 acres). Some of these relicts are highly restorable; others contain only a few prairie plants in a matrix of brome and will be more difficult to restore. When the process of restoration (management and enhancement of existing remnant communities) and reconstruction (reestablishment of native communities on agricultural sites) is completed, it is anticipated that the Refuge will consist of approximately 5,900 acres of prairie, 2,000 acres of oak savanna or woodland, and 750 acres of wetland and riparian communities. Ecological restoration and reconstruction at this scale in the tallgrass prairie ecosystem is unprecedented in the United States.

Report↗
USGS2014

Freshwater mussels of Florida

An exhaustive guide to all aspects of the freshwater mussel fauna in Florida, Freshwater Mussels of Florida covers the ecology, biology, distribution, and conservation of the many species of bivalve mollusks in the Sunshine State. In the past three decades, researchers, the public, businesses that depend on wildlife, and policy makers have given more attention to the threatened natural diversity of the Southeast, including freshwater mussels. This compendium meets the increasingly urgent need to catalog this imperiled group of aquatic organisms in the United States.

Florida↗
USGS2016

U.S. Geological Survey science for the Wyoming Landscape Conservation Initiative—2015 annual report

This is the eighth annual report highlighting U.S. Geological Survey (USGS) science and decision-support activities conducted for the Wyoming Landscape Conservation Initiative (WLCI). The activities address specific management needs identified by WLCI partner agencies. In 2015, USGS scientists continued 24 WLCI projects in 5 categories: (1) acquiring and analyzing resource-condition data to form a foundation for understanding and monitoring landscape conditions and projecting changes; (2) using new technologies to improve the scope and accuracy of landscape-scale monitoring and assessments, and applying them to monitor indicators of ecosystem conditions and the effectiveness of on-the-ground habitat projects; (3) conducting research to elucidate the mechanisms that drive wildlife and habitat responses to changing land uses; (4) managing and making accessible the large number of databases, maps, and other products being developed; and (5) coordinating efforts among WLCI partners, helping them to use USGS-developed decision-support tools, and integrating WLCI outcomes with future habitat enhancement and research projects. Of the 24 projects, 21 were ongoing, including those that entered new phases or more in-depth lines of inquiry, 2 were new, and 1 was completed. A highlight of 2015 was the WLCI science conference sponsored by the USGS, Bureau of Land Management, and National Park Service in coordination with the Wyoming chapter of The Wildlife Society. Of 260 participants, 41 were USGS professionals representing 13 USGS science centers, field offices, and Cooperative Wildlife Research Units. Major themes of USGS presentations included using new technologies for developing more efficient research protocols for modeling and monitoring natural resources, researching effects of energy development and other land uses on wildlife species and habitats of concern, and modeling species distributions, population trends, habitat use, and effects of land-use changes. There was also a special session on the effectiveness of Wyoming’s Sage-Grouse Executive Order. Combined, USGS presentations provided WLCI partners with a wealth of information and conservation tools. The project completed in 2015 yielded an index of important agricultural lands in the WLCI region. The index improves upon existing measures of agricultural productivity and provides planners and managers with additional values to consider when making decisions about land use and conservation actions. The two new projects include an analysis of satellite imagery to quantify sagebrush productivity and mortality, and an evaluation of how groundwater and small streams interact in the upper Green River Basin. Initiated in response to concern among WLCI partners that large areas of sagebrush appear to have died recently, the sagebrush study objectives are to assess effects of these mortality events on overall sagebrush ecosystem productivity, evaluate the feasibility of using satellite imagery to detect patterns in sagebrush mortality over time, and identify factors driving these mortality events. The groundwater-streamflow interaction study is being conducted by hydrologists and fish ecologists to better understand how groundwater-streamflow interactions are affected by energy-resource development and how native fish communities are affected by these factors. Expected outcomes of both new projects will provide WLCI partners with additional information and decision-support tools. Highlights of ongoing science foundation activities included simulations of nine alternative build-out scenarios for oil and gas development and an associated online fact sheet that explains how the simulations were conducted, with an applied example for the Atlantic Rim. Also completed in 2015 was an update of the USGS online inventory of mineral resources data, and publication of a USGS uranium resource survey for the WLCI region. Combined, the outcomes of this work provide decisionmakers and managers with important baseline information for existing and (or) future planning and monitoring efforts. Terrestrial monitoring activities in 2015 emphasized the use of satellite data in combination with other technologies and field data to monitor, assess, and (or) forecast distribution patterns and (or) trends in sagebrush ecosystems, seasonal and migration stopover habitats used by mule deer and elk, and semi-arid aspen woodlands. Several professional papers detailing new monitoring models and results have been published. Combined, this and related work will help managers understand distribution patterns and trends among priority habitats, identify areas in need of restoration or conservation, and monitor the effectiveness of habitat-management actions. Aquatic monitoring activities entailed not only the new groundwater-streamflow interaction study already mentioned, but also continued monitoring with streamgages paired with nearby wells in the Green River Basin to assess groundwater effects on streamflow and surface water temperatures. A map that portrays groundwater levels and general direction of flow in the Green River Basin was published as well . Overall, outcomes of USGS hydrological research and monitoring will inform WLCI partners about water resources in the WLCI region and help to explain fish-community responses to energy-resource development. In 2015, USGS terrestrial wildlife ecologists continued to make crucial strides towards better understanding wildlife species responses to energy-resource development and other land-use changes. This body of research includes six taxa that require or heavily depend on sagebrush habitats: sage-grouse, pygmy rabbits, 3 songbird species, and mule deer. Native fish communities are also being evaluated. Approaches include modeling and mapping wildlife species distributions, abundances, and trends; using satellite and other technologies to track wildlife seasonal movements; conducting successive phases of research that build on the knowledge gained through prior phases to reveal the specific factors or thresholds that drive population- or individual-level responses to changes; and conducting population viability analyses. Additionally, wildlife habitat association models for pygmy rabbit and sage-grouse were combined with the oil and gas build-out scenarios to project species responses to alternative energy development scenarios. Outcomes of the wildlife response research are helping decisionmakers and managers identify specific factors that contribute to species population trends, the potential for spatial overlap between important wildlife habitats and proposed energy-resource development, locations of priority habitats for restoration and conservation, and more. Data and WLCI Web site management highlights of 2015 included not only ongoing software upgrades, but also an update of the datasets displayed in two of the online products developed for the WLCI effort: (1) a map of 15,532 oil and natural gas well pad scars and other features associated with oil and gas extraction, and (2) a map of oil and gas, oil shale, uranium, and solar energy production, both for southwestern Wyoming. In addition, a map viewer was developed for a previously published map of coal and wind production in relation to sage-grouse distribution and core management areas in southwestern Wyoming. Combined, these maps place valuable decision-support tools in the hands of WLCI partners. The USGS coordination efforts on behalf of the WLCI in 2015 included significant work on planning and executing the WLCI science conference. They also included ongoing efforts to support Local Project Development Teams and the WLCI Coordination Team (CT) with developing conservation priorities and strategies, identifying priority areas for future conservation actions, supporting the evaluation and ranking of conservation projects, and evaluating the ways in which proposed habitat projects relate to WLCI priorities. In 2015, the USGS also assisted the WLCI CT with updating the WLCI Conservation Action Plan.

Wyoming↗
USGS2014

Interactive effects of climate change with nutrients, mercury, and freshwater acidification on key taxa in the North Atlantic Landscape Conservation Cooperative region

The North Atlantic Landscape Conservation Cooperative LCC (NA LCC) is a public–private partnership that provides information to support conservation decisions that may be affected by global climate change (GCC) and other threats. The NA LCC region extends from southeast Virginia to the Canadian Maritime Provinces. Within this region, the US National Climate Assessment documented increases in air temperature, total precipitation, frequency of heavy precipitation events, and rising sea level, and predicted more drastic changes. Here, we synthesize literature on the effects of GCC interacting with selected contaminant, nutrient, and environmental processes to adversely affect natural resources within this region. Using a case study approach, we focused on 3 stressors with sufficient NA LCC region-specific information for an informed discussion. We describe GCC interactions with a contaminant (Hg) and 2 complex environmental phenomena—freshwater acidification and eutrophication. We also prepared taxa case studies on GCC- and GCC-contaminant/nutrient/process effects on amphibians and freshwater mussels. Several avian species of high conservation concern have blood Hg concentrations that have been associated with reduced nesting success. Freshwater acidification has adversely affected terrestrial and aquatic ecosystems in the Adirondacks and other areas of the region that are slowly recovering due to decreased emissions of N and sulfur oxides. Eutrophication in many estuaries within the region is projected to increase from greater storm runoff and less denitrification in riparian wetlands. Estuarine hypoxia may be exacerbated by increased stratification. Elevated water temperature favors algal species that produce harmful algal blooms (HABs). In several of the region's estuaries, HABs have been associated with bird die-offs. In the NA LCC region, amphibian populations appear to be declining. Some species may be adversely affected by GCC through higher temperatures and more frequent droughts. GCC may affect freshwater mussel populations via altered stream temperatures and increased sediment loading during heavy storms. Freshwater mussels are sensitive to un-ionized ammonia that more toxic at higher temperatures. We recommend studying the interactive effects of GCC on generation and bioavailability of methylmercury and how GCC-driven shifts in bird species distributions will affect avian exposure to methylmercury. Research is needed on how decreases in acid deposition concurrent with GCC will alter the structure and function of sensitive watersheds and surface waters. Studies are needed to determine how GCC will affect HABs and avian disease, and how more severe and extensive hypoxia will affect fish and shellfish populations. Regarding amphibians, we suggest research on 1) thermal tolerance and moisture requirements of species of concern, 2) effects of multiple stressors (temperature, desiccation, contaminants, nutrients), and 3) approaches to mitigate impacts of increased temperature and seasonal drought. We recommend studies to assess which mussel species and populations are vulnerable and which are resilient to rising stream temperatures, hydrological shifts, and ionic pollutants, all of which are influenced by GCC.

Chesapeake Bay↗
USGS2021

Fragmentation and streamflow metrics drive prairie chub (Macrhybopsis australis) occurrence in the upper Red River basin

Dam construction threatens global aquatic biodiversity by fragmenting stream networks and altering flow regimes. The negative effects of dams are exacerbated by increased drought periods and associated water withdrawals, especially in semi-arid regions. Stream fishes are particularly threatened owing to their mobile nature and requirement for multiple habitats to complete their life cycles. An understanding of relationships with fragmentation and flow regimes, particularly as coarse-scale (e.g. catchment) constraints on species distributions, is essential for stream fish conservation strategies. Prairie chub ( Macrhybopsis australis ) is a small-bodied minnow (Cyprinidae) with poorly understood ecology endemic to the North American Great Plains. Suspected declines in abundance and extirpations have resulted in conservation interest for prairie chub at state and federal levels. Prairie chub is thought to share its reproductive strategy with pelagic-broadcast spawning minnows (pelagophils). Freshwater pelagic-broadcast spawning fishes have been disproportionately affected by fragmentation and streamflow alteration globally. Relationships of prairie chub occurrence with coarse-scale fragmentation and streamflow metrics were examined in the upper Red River catchment. Occurrence probability was modelled using existing survey data, while accounting for variable detection. The modelled relationships were used to project the distribution of prairie chub in both a wet and dry climatic period. The probability of prairie chub occurrence was essentially zero at sites with higher densities of upstream dams, but increased sharply with increases in flow magnitude, downstream open mainstem, and flood duration. The projected distribution of prairie chub was broader than indicated by naïve occurrence, but similar in both climatic periods. The occurrence relationships are consistent with the hypotheses of pelagic broadcast spawning and represent coarse-scale constraints that are useful for identifying areas of the stream network with higher potential for finer-scale prairie chub conservation and recovery efforts. In addition to informing pelagophil conservation, the relationships are also applicable to pelagic-broadcast spawning fishes in marine environments.

Oklahoma, Texas↗
USGS1981

Water levels in bedrock aquifers in South Dakota

This report on water levels in bedrock aquifers in South Dakota is the result of a continuing investigation begun in 1959 by the U.S. Geological Survey in cooperation with the South Dakota Department of Water and Natural Resources. The purpose of the investigation is to collect data on the artesian water supply in the bedrock aquifers and to present these data in data reports that will aid in planning the use and conservation of water from these aquifers in South Dakota. The locations of wells were data have been collected are included.

South Dakota↗
USGS2012

Microbial mineralization of cis-dichloroethene and vinyl chloride as a component of natural attenuation of chloroethene contaminants under conditions identified in the field as anoxic

Chlororespiration is a key component of remediation at many chloroethene-contaminated sites. In some instances, limited accumulation of reductive dechlorination daughter products may suggest that natural attenuation is not adequate for site remediation. This conclusion is justified when evidence for parent compound (tetrachloroethene, PCE, or trichloroethene, TCE) degradation is lacking. For many chloroethene-contaminated shallow aquifer systems, however, non-conservative losses of the parent compounds are clear but the mass balance between parent compound attenuation and accumulation of reductive dechlorination daughter products is incomplete. Incomplete mass balance indicates a failure to account for important contaminant attenuation mechanisms, and is consistent with contaminant degradation to non-diagnostic mineralization products. An ongoing technical debate over the potential for mineralization of dichloroethene (DCE) and vinyl chloride (VC) to CO 2 in the complete absence of diatomic oxygen has largely obscured the importance of microbial DCE/VC mineralization at dissolved oxygen (DO) concentrations below the current field standard (DO < 0.1-0.5 milligrams per liter) for nominally anoxic conditions. This study demonstrates that oxygen-based microbial mineralization of DCE and VC can be substantial under field conditions that are frequently characterized as "anoxic." Because mischaracterization of operant contaminant biodegradation processes can lead to expensive and ineffective remedial actions, a modified framework for assessing the potential importance of oxygen during chloroethene biodegradation was developed.

Scientific Investigations Report↗
USGS2023

A coupled human and natural systems framework to characterize emerging infectious diseases: The case of fibropapillomatosis in marine turtles

Emerging infectious diseases of wildlife have markedly increased in the last few decades. Unsustainable, continuous, and rapid alterations within and between coupled human and natural systems have significantly disrupted wildlife disease dynamics. Direct and indirect anthropogenic effects, such as climate change, pollution, encroachment, urbanization, travel, and trade, can promote outbreaks of infectious diseases in wildlife. We constructed a coupled human and natural systems framework identifying three main wildlife disease risk factors behind these anthropogenic effects: (i) immune suppression, (ii) viral spillover, and (iii) disease propagation. Through complex and convoluted dynamics, each of the anthropogenic effect listed in our framework can lead, to some extent, to one or more of the identified risk factors accelerating disease outbreaks in wildlife. In this review, we present a novel framework to study anthropogenic impacts within coupled human and natural systems that facilitate emergence of infectious disease involving wildlife. We demonstrate the utility of the framework by applying it to Fibropapillomatosis disease of marine turtles. We aim to articulate the intricate and complex nature of anthropogenically-exacerbated wildlife infectious diseases as multifactorial. This paper supports the adoption of a One Health approach and invites the collaboration of multiple disciplines for the achievement of effective and long-lasting conservation and wildlife emerging diseases mitigation outcomes.

Animals↗
USGS2023

Protocol for the reintroduction of California red-legged frogs to Santa Monica Mountains National Recreation Area

Once common and widespread in Southern California, California red-legged frogs ( Rana draytonii ) began declining sometime in the middle of the 20th century. They were listed as threatened under the Endangered Species Act in 1996. Three small and isolated populations remained in Los Angeles and Ventura Counties by the start of the 21st century. The nearest population of California red-legged frogs to Santa Monica Mountains National Recreation Area is critically small, located 15 km to the north, yet there is evidence of persistence, including successful reproduction each year it has been measured. A potential solution to alleviate small population size and isolation is to reintroduce a species back to habitable historical locations nearby. In 2011, we initiated a project to reintroduce California red-legged frogs back to the Santa Monica Mountains, where historical records showed they were once widespread. We developed a procedure to transfer partial egg masses into tadpole rearing pens located within streams determined to be suitable for the species. This translocation protocol outlines our procedure and results for the first five years of the project. It is our hope that this protocol will guide and inform similar conservation efforts for California red-legged frogs in other parts of their range as well as other amphibian conservation efforts throughout the world.

California↗
USGS2016

Iterative ecological forecasting: Needs, opportunities, and challenges

A fundamental environmental challenge facing humanity in the 21st century and beyond is predicting the impacts of global environmental change. This challenge is complicated by the fact that we live on a non-stationary, unreplicated planet that is rapidly moving outside the envelope of natural variability into an historical non-analog world. In other words, while the past helps inform us about how the world has worked, it may no longer be the relevant frame of reference for management, conservation, and sustainability. In this future world the two questions at the foundation of sustainability are “How are ecosystems and the services they provide going to change in the future?” and “How do human decisions affect this trajectory?” These are, at their heart, questions about ecological forecasting.

Conference Paper↗
USGS2014

Locking horns with Hawai‘i’s non-native ungulate issues

Conservation and management interests for sustained-yield hunting of non-native ungulates in Hawai‘i have conflicted with the conservation of native biota for several decades. Hawaiian ecosystems evolved in the absence of large mammals and all currently hunted animals in Hawai‘i are non-native species. The best-studied aspects of Hawai‘i’s ungulates have dealt primarily with direct negative effects on native biota in natural areas, but there has been little research in population dynamics for sustained-yield management. Ungulates have been removed from approximately 750 km2 throughout the Hawaiian Islands to protect these natural areas, thereby reducing the amount of land area available for hunting activities and the maintenance of game populations. At the same time, unauthorized introductions of additional wild ungulate species between Hawaiian Islands have recently increased in frequency. The majority of hunting activities are of feral domestic livestock species for subsistence purposes, which typically do not generate sufficient revenue to offset costs of game management. Moreover, bag limits and seasons are generally not determined from biological criteria because harvest reporting is voluntary and game populations are rarely monitored. Consequently, ungulate populations cannot be managed for any particular level of abundance or other objectives. Research and monitoring which emphasize population dynamics and productivity would enable more precisely regulated sustained-yield game management programs and may reduce potential conflicts with the conservation of native biota.

Hawai'i↗
USGS1999

Hydrogeomorphic factors and ecosystem responses in coastal wetlands of the Great Lakes

Gauging the impact of manipulative activities, such as rehabilitation or management, on wetlands requires having a notion of the unmanipulated condition as a reference. And understanding of the reference condition requires knowledge of dominant factors influencing ecosystem processes and biological communities. In this paper, we focus on natural physical factors (conditions and processes) that drive coastal wetland ecosystems of the Laurentian Great Lakes. Great Lakes coastal wetlands develop under conditions of large-lake hydrology and disturbance imposed at a hiearchy of spatial and temporal scales and contain biotic communities adapted to unstable and unpredictable conditions. Coastal wetlands are configured along a continuum of hydrogeomorphic types: open coastal wetlands, drowned river mouth and flooded delta wetlands, and protected wetlands, each developing distinct ecosystem propertics and biotic communities. Hydrogeomorphic factors associated with the lake and watershed operate at a hierarchy of scales: a) local and short-term (seiches and ice action), b) watershed / lakewide / annual (seasonal water-level change), and c) larger or year-to-year and longer (regional and/or greater than one-year). Other physical factors include the unique water quality features of each lake. The aim of this paper is to provide scientists and managers with a framework for considering regional and site-specific geomorphometry and a hierarchy of physical processes in planning management and conservation projects.

Great Lakes↗
USGS2025

Biodiversity on public lands: How community science can help

Species inventories are crucial for conservation but are difficult to assemble and maintain. Bioblitzes, which encourage the public to document biodiversity in a particular area and timeframe, may offer useful information but their integration with other datasets poses challenges. We investigated the potential contribution of bioblitzes to natural resource management using observations from the United States National Park Service (NPS) 2016 Centennial Bioblitz. Through automated cross-referencing over 19,000 iNaturalist “research-grade” observations from 107 national parks with existing park inventory lists, we matched 86% of species documented in the Bioblitz to NPS species lists, based on current taxonomy, and matched another 6% of species using alternative scientific names using our matching process in R. Of the remaining 13.5% that did not match the NPS species lists, we manually found that 84% of the unmatched species were found within the lists or were outside the boundaries of the park, identifying 141 native species that were unrecorded in NPS species lists. Many introduced species were recorded; they were more likely to be documented in parks closer to cities. Parks near cities also drew more participants. Our study shows how public participation, through iNaturalist and bioblitzes, can facilitate biodiversity monitoring across large spatial scales.

Conservation Science and Practice↗
USGS2021

The role of neutral and adaptive genomic variation in population diversification and speciation in two ground squirrel species of conservation concern

Understanding the neutral (demographic) and adaptive processes leading to the differentiation of species and populations is a critical component of evolutionary and conservation biology. In this context, recently diverged taxa represent a unique opportunity to study the process of genetic differentiation. Northern and southern Idaho ground squirrels ( Urocitellus brunneus —NIDGS, and U . endemicus —SIDGS, respectively) are a recently diverged pair of sister species that have undergone dramatic declines in the last 50 years and are currently found in metapopulations across restricted spatial areas with distinct environmental pressures. Here we genotyped single-nucleotide polymorphisms (SNPs) from buccal swabs with restriction site-associated DNA sequencing (RADseq). With these data we evaluated neutral genetic structure at both the inter- and intraspecific level, and identified putatively adaptive SNPs using population structure outlier detection and genotype–environment association (GEA) analyses. At the interspecific level, we detected a clear separation between NIDGS and SIDGS, and evidence for adaptive differentiation putatively linked to torpor patterns. At the intraspecific level, we found evidence of both neutral and adaptive differentiation. For NIDGS, elevation appears to be the main driver of adaptive differentiation, while neutral variation patterns match and expand information on the low connectivity between some populations identified in previous studies using microsatellite markers. For SIDGS, neutral substructure generally reflected natural geographical barriers, while adaptive variation reflected differences in land cover and temperature, as well as elevation. These results clearly highlight the roles of neutral and adaptive processes for understanding the complexity of the processes leading to species and population differentiation, which can have important conservation implications in susceptible and threatened species.

Idaho↗
USGS2017

Monitoring Hawaiian biodiversity: Pilot study to assess changes to forest birds and their habitat

Biological diversity, or biodiversity, is the variety and abundance of species in a defined area, and is one of the oldest and most basic descriptions of biological communities. Understanding how populations and communities are structured and change over space and time in response to internal and external forces is a management priority. Effective management practices and conservation strategies depend on our understanding of the relationship between changes in biodiversity and ecological drivers such as invasive species, land use and climate change. To demonstrate how changes in biodiversity may be monitored over a large (400 km2) tract of native forest habitat, we compared bird and plant community composition and structure in an upper montane region of Hawai‘i Island originally surveyed in 1977 as part of the Hawai‘i Forest Bird Survey (Scott et al. 1986) with a comprehensive sample of the same region in 2015. Our findings suggest that across a region spanning an elevation range of 600 to 2,000 m considerable changes occurred in the plant and bird communities between 1977 and 2015. Endemic and indigenous plants species richness (i.e., total number of species) decreased dramatically in the low and middle elevations below an invasive weed front, whereas naturalized plant species richness did not change between the two periods at any elevation. Endemic bird abundance decreased and two species were lost in the lower elevations (< 1,100 m) between 1977 and 2015, while naturalized bird abundance and the numbers of species increased in the same area. In addition to changes in community composition, the structure of the forest showed evidence of changes in dominant and sub-dominant tree canopy cover, shrub and herbaceous cover, dominant tree canopy height, and matted fern cover. Biodiversity monitoring helps to define specific conservation targets and to measure progress towards reaching those targets. It is difficult to ascribe causative factors to a change in biodiversity without directly manipulating the environment. Forest habitat in a variety of settings (i.e., islands and regions with differing land-use histories and elevation ranges), however, can provide opportunities to evaluate the influence of ecological drivers. Declines in native bird biodiversity in low-elevation areas may be attributed to invasive species as land use and climate conditions have remained relatively similar over the 40-year period. Thus, the shift from an endemic-naturalized co-dominated community in 1977 to one dominated by naturalized, alien birds in 2015, and reduction in native bird abundance over that period, may reflect increasing dominance by naturalized plants within this forested area. Inferences drawn from analyses of region-wide surveys, especially with replicate datasets, will facilitate the identification of broad-scale changes in biodiversity, and provide a needed current datum in Hawaiian plant and bird biodiversity monitoring.

Hawaii↗
USGS2014

Effect of passive acoustic sampling methodology on detecting bats after declines from white nose syndrome

Concomitant with the emergence and spread of white-nose syndrome (WNS) and precipitous decline of many bat species in North America, natural resource managers need modified and/or new techniques for bat inventory and monitoring that provide robust occupancy estimates. We used Anabat acoustic detectors to determine the most efficient passive acoustic sampling design for optimizing detection probabilities of multiple bat species in a WNS-impacted environment in New York, USA. Our sampling protocol included: six acoustic stations deployed for the entire duration of monitoring as well as a 4 x 4 grid and five transects of 5-10 acoustic units that were deployed for 6-8 night sample durations surveyed during the summers of 2011-2012. We used Program PRESENCE to determine detection probability and site occupancy estimates. Overall, the grid produced the highest detection probabilities for most species because it contained the most detectors and intercepted the greatest spatial area. However, big brown bats ( Eptesicus fuscus ) and species not impacted by WNS were detected easily regardless of sampling array. Endangered Indiana ( Myotis sodalis ) and little brown ( Myotis lucifugus ) and tri-colored bats ( Perimyotis subflavus ) showed declines in detection probabilities over our study, potentially indicative of continued WNS-associated declines. Identification of species presence through efficient methodologies is vital for future conservation efforts as bat populations decline further due to WNS and other factors.

Journal of Ecology and the Natural Environment↗