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At least 1,351 records · Page 75Linked to original sources

USGS2018

Profiles of digestive enzymes of two competing planktivores, silver carp and gizzard shad, differ

Typically, studies in digestive physiology in fish focus on a few enzymes and provide insight into the specific processes of the enzyme in a targeted species. Comparative studies assessing a wide number of digestive enzymes on fishes that compete for food resources are lacking, especially in the context of an introduced species. It is generally thought that the invasive silver carp (SVC; Hypophthalmichthys molitrix ) directly compete for food resources with the native gizzard shad (GZS; Dorosoma cepedianum ) in waters where they coexist. We compared 19 digestive enzymes between SVC and GZS throughout a year and in two rivers in the Midwestern United States: Illinois River and Wabash River. All digestive enzymes analyzed were detected in both SVC and GZS in both rivers. However, the profiles of the digestive enzymes varied by species. Alkaline phosphatase, valine arylamidase, acid phosphatase, naphthol-AS-BI-phosphohydrolase and N-acetyl-β-glucosaminidase were all much higher in SVC than in GZS. Differences between digestive enzyme profiles were also observed between rivers and months. This study demonstrates the utility of using an ecological approach to compare physiological features in fishes.

Ichthyological Research↗

USGS2017

A swath across the great divide: Kelp forests across the Samalga Pass biogeographic break

Biogeographic breaks are often described as locations where a large number of species reach their geographic range limits. Samalga Pass, in the eastern Aleutian Archipelago, is a known biogeographic break for the spatial distribution of several species of offshore-pelagic communities, including numerous species of cold-water corals, zooplankton, fish, marine mammals, and seabirds. However, it remains unclear whether Samalga Pass also serves as a biogeographic break for nearshore benthic communities. The occurrence of biogeographic breaks across multiple habitats has not often been described. In this study, we examined if the biogeographic break for offshore-pelagic communities applies to nearshore kelp forests. To examine whether Samalga Pass serves as a biogeographic break for kelp forest communities, this study compared abundance, biomass and percent bottom cover of species associated with kelp forests on either side of the pass. We observed marked differences in kelp forest community structure, with some species reaching their geographic range limits on the opposing sides of the pass. In particular, the habitat-forming kelp Nereocystis luetkeana, and the predatory sea stars Pycnopodia helianthoides and Orthasterias koehleri all occurred on the eastern side of Samalga Pass but were not observed west of the pass. In contrast, the sea star Leptasterias camtschatica dispar was observed only on the western side of the pass. We also observed differences in overall abundance and biomass of numerous associated fish, invertebrate and macroalgal species on opposing sides of the pass. We conclude that Samalga Pass is important biogeographic break for kelp forest communities in the Aleutian Archipelago and may demark the geographic range limits of several ecologically important species.

Alaska↗

USGS2019

Ecosystem change and population declines in gulls: Shifting baseline considerations for assessing ecological integrity of protected areas

In Lake Superior's Pukaskwa National Park (PNP) in northern Ontario, Canada, herring gull ( Larus argentatus ) population size is used as an indicator of ecological integrity. Since the 1970s, gull populations have declined by 70% suggesting deteriorating park conditions. However, most other rated park indicators show stable or positive trends. Here, we focus on reconciling these seemingly disparate trends through a better understanding of factors regulating PNP gull populations. Lake-wide declines in surface-schooling prey fish may be limiting aquatic food resources for PNP gulls. To investigate this, we examined gull population trends in different parts of the park in the context of food availability. Gull diets were assessed using regurgitated pellets, egg stable isotopes (nitrogen, carbon) and fatty acids. Population declines were more severe in southern PNP compared to northern PNP and inter-region differences in bird diets likely contributed to these population trends. Gulls in the south relied to a greater extent on dwindling aquatic food resources, i.e., prey fish, while birds in northern PNP supplemented their diets with anthropogenic foods, i.e., garbage. Recognizing that regional declines in aquatic food availability have occurred across eastern Lake Superior is important for the interpretation of PNP gull population trends. Wide-scale ecological changes affecting PNP suggest that factors limiting PNP's herring gull population are not park-specific but, instead, reflect broader ecosystem-wide changes. Defining an appropriate threshold based on current knowledge of ecological conditions on Lake Superior is critical for using herring gull populations as an indicator of park ecological integrity.

Journal of Great Lakes Research↗

USGS2016

A resilience approach can improve anadromous fish restoration

Most anadromous fish populations remain at low levels or are in decline despite substantial investments in restoration. We explore whether a resilience perspective (i.e., a different paradigm for understanding populations, communities, and ecosystems) is a viable alternative framework for anadromous fish restoration. Many life history traits have allowed anadromous fish to thrive in unimpacted ecosystems but have become contemporary curses as anthropogenic effects increase. This contradiction creates a significant conservation challenge but also makes these fish excellent candidates for a resilience approach. A resilience approach recognizes the need to maintain life history, population, and habitat characteristics that increase the ability of a population to withstand and recover from multiple disturbances. To evaluate whether a resilience approach represents a viable strategy for anadromous fish restoration, we review four issues: (1) how resilience theory can inform anadromous fish restoration, (2) how a resilience-based approach is fundamentally different than extant anadromous fish restoration strategies, (3) ecological characteristics that historically benefited anadromous fish persistence, and (4) examples of how human impacts harm anadromous fish and how a resilience approach might produce more successful outcomes. We close by suggesting new research and restoration directions for implementation of a resilience-based approach.

Fisheries↗

USGS2019

Review of and recommendations for monitoring contaminants and their effects in the San Francisco Bay−Delta

Legacy and current-use contaminants enter into and accumulate throughout the San Francisco Bay−Delta (Bay−Delta), and are present at concentrations with known effects on species important to this diverse watershed. There remains major uncertainty and a lack of focused research able to address and provide understanding of effects across multiple biological scales, despite previous and ongoing emphasis on the need for it. These needs are challenging specifically because of the established regulatory programs that often monitor on a chemical- by-chemical basis, or in which decisions are grounded in lethality-based endpoints. To best address issues of contaminants in the Bay−Delta, monitoring efforts should consider effects of environmentally relevant mixtures and sub- lethal impacts that can affect ecosystem health. These efforts need to consider the complex environment in the Bay−Delta including variable abiotic (e.g., temperature, salinity) and biotic (e.g., pathogens) factors. This calls for controlled and focused research, and the development of a multi-disciplinary contaminant monitoring and assessment program that provides information across biological scales. Information gained in this manner will contribute toward evaluating parameters that could alleviate ecologically detrimental outcomes. This review is a result of a Special Symposium convened at the University of California−Davis (UCD) on January 31, 2017 to address critical information needed on how contaminants affect the Bay−Delta. The UCD Symposium focused on new tools and approaches for assessing multiple stressor effects to freshwater and estuarine systems. Our approach is similar to the recently proposed framework laid out by the U.S. Environmental Protection Agency (USEPA) that uses weight of evidence to scale toxicological responses to chemical contaminants in a laboratory, and to guide the conservation of priority species and habitats. As such, we also aimed to recommend multiple endpoints that could be used to promote a multi-disciplinary understanding of contaminant risks in Bay−Delta while supporting management needs.

California↗

USGS2007

Coastal Prairie Restoration Information System: Version 1 (Louisiana)

The Coastal Prairie Restoration Information System (CPR) is a Microsoft Access database that allows users to query and view data about Louisiana coastal prairie species. Less than 0.1% of Louisiana's coastal prairie vegetation remains in a relatively undisturbed condition. Encompassing as much as 1 million hectares of land, coastal prairie is a hybrid of coastal wetlands and tall grass prairie. Over 550 plant species have been identified in Louisiana's coastal prairies to date. Efforts to conserve and restore this endangered ecosystem are limited by the ability of workers to identify and access knowledge about this diverse group of plants. In this database, a variety of data are provided for each of 650 coastal prairie species in Louisiana. The database was developed at the U.S. Geological Survey National Wetlands Research Center by Larry Allain, with software development by Myra Silva. Additional funding was provided by the biology department of the University of Louisiana at Lafayette (ULL), the ULL Center for Environmental and Ecological Technology, and the National Science Foundation.

Data Series↗

USGS2010

USGS Science Serves Public Health

Human health so often depends on the health of the environment and wildlife around us. The presence of naturally occurring or human environmental contaminants and the emergence of diseases transferred between animals and humans are growing concerns worldwide. The USGS is a source of natural science information vital for understanding the quantity and quality of our earth and living resources. This information improves our understanding not only of how human activities affect environmental and ecological health, but also of how the quality of our environment and wildlife in turn affects human health. USGS is taking a leadership role in providing the natural science information needed by health researchers, policy makers, and the public to safeguard public health

Fact Sheet↗

USGS1989

National Research Program of the Water Resources Division, U. S. Geological Survey, Fiscal Year 1989

The National Research Program (NRP) of the U.S. Geological Survey's Water Resources Division (WRD) had its beginnings in the late 1950's when "core research" was added as a line item to the Congressional budget. Since that time, the NRP has grown to encompass a broad spectrum of scientific investigations. The sciences of hydrology, mathematics, chemistry, physics, ecology, biology, geology, and engineering are used to gain a fundamental understanding of the processes that affect the availability, movement, and quality of the Nation's water resources. The knowledge gained and methods developed have great value to WRD's operational program. Results of the investigations conducted by the NRP are applicable not only to the solution of current water problems but also to future issues, anticipated or unanticipated, that may affect the Nation's water resources.

Open-File Report↗

USGS2024

Empirical assessments of the type and strength of stream fish habitat associations can advance understanding of functional diversity and promote effective conservation.

The ability to accurately quantify biodiversity is fundamental to understanding ecological trends, identifying drivers of declines, and selecting effective conservation options. Scientists and resource managers have grappled with what metrics best show relevant biodiversity patterns and are still practical enough to aid on-the-ground resource conservation. Our purpose is to construct empirically derived, functional habitat guilds for prairie stream fish, then recommend future directions for constructing and using diversity metrics that aid field-based conservation. Working in the Upper Neosho River, KS, USA, we used univariate methods, cluster analysis, non-metric multi-dimensional scaling, and an analysis of similarity to functionally group stream fish taxa. The 11 most abundant fish species grouped into seven ecological guilds: riffle specialist, pool specialist, riffle generalist, pool generalist, riffle–run generalist, pool–run generalist, and generalist. Combining the habitat type and strength of association added ecological accuracy to our species groups. Employing multiple statistical methods increased confidence and generality in our grouping results. Moving forward will require a coordinated, coalition-driven, conservation-related strategy on which researchers and practitioners collaborate to synthesize diverse empirical results, organize general principles of structure and function, and balance accuracy with practicality.

Kansas↗

USGS2017

The Moquah Barrens Research Natural Area: Loss of a pine barrens ecosystem

The Moquah Barrens Research Natural Area (RNA) was established by the Chequamegon National Forest and the Lakes States Forest Experiment Station in 1935 with a research objective well-suited to the needs of the Forest Service and the scientific understanding of ecosystem function prevalent at the time of establishment. The original research plan was never implemented, which led to a joint Forest-Station decision in 1956 to disestablish the RNA. However, that decision was never implemented. A series of management decisions made after 1956 led to the loss of the pine barrens ecosystem originally encompassed by the RNA. This loss is not irretrievable and the work necessary to recover the original ecosystem is possible under existing RNA management guidelines. The experience of the Moquah Barrens RNA can be used by the Forest Service to improve overall management of the entire system of research natural areas. Two main areas of opportunity are identified: 1) implement an improved approach to managing official records associated with RNAs; and 2) adopt a management framework suitable for long-term ecological projects.

Wisconsin↗

USGSDate not supplied

The ecology of Humboldt Bay, California, an estuarine profile

Synthesizes data on the ecological relationships and functions of the estuary, including information on physical aspects of the bay environment; describes the biotic communities and their relationships; provides management considerations in terms including environmental concerns; and identifies research and management information gaps. Portions of the bay are managed as a national wildlife refuge. Management issues for this ecosystem include loss of habitat and degradation of the environment by additional industrial development and nonpoint source pollution. -from Authors

California↗

USGS2025

Fisheries research and monitoring activities of the Lake Erie Biological Station, 2024

A comprehensive understanding of fish populations and their interactions is the cornerstone of modern fishery management and the basis for Lake Erie’s Fish Community Objectives (FCOs) developed in 2020 (Francis et al. 2020). The 2024 U.S. Geological Survey (USGS) Lake Erie Biological Station Annual Report is responsive to these FCOs and the USGS obligations via a Memorandum of Understanding (MOU 2017) with the Great Lakes Fishery Commission (GLFC) Council of Lake Committees (CLC) to provide scientific information in support of fishery management. Goals for the USGS Great Lakes Deepwater Fish Assessment and Ecological Studies were to monitor long-term changes in the fish community and track population dynamics of key fishes of interest to management agencies. Specific to Lake Erie, expectations were sustained investigations of native percids, prey fish populations, and Lake Trout. All work was conducted as part of the Deepwater Science Program under the authority of the Great Lakes Fishery Research Authorization Act of 2019 (16 USC §941h). The USGS 2024 Deepwater Science Program fieldwork began in Lake Erie in March and concluded in December, using trawl, gill net, hydroacoustic, lower trophic sampling devices, and telemetry methods. This work resulted in 44 bottom trawls covering 41 ha of lake bottom and catching 48,936 fish totaling 995 kg in the West Basin of Lake Erie, with detailed results described below. Overnight gill net sets (n=25) for coldwater species were performed in the East Basin of Lake Erie. A total of 8 km of gillnet was deployed during these surveys, which caught 106 fish, 92 of which were native coldwater species: Lake Trout, Burbot, and Lake Whitefish. Results from coldwater species assessments will be reported in the Coldwater Task Group report to the GLFC and the CLC (CTG 2025). These reports are used to inform Lake Trout stocking decisions and direct lamprey control measures (16 USC §939a). USGS hydroacoustic sampling included twenty-six 5-km transects (130 km total) in the Central Basin as part of a collaborative lake-wide survey with details and results reported by the Forage Task Group (FTG 2025). Lower trophic sampling provided data from zooplankton samples (n=12) and water quality profiles (n=12) to populate a database maintained by the Michigan Department of Natural Resources (MDNR), Ontario Ministry of Natural Resources (OMNR), Ohio Department of Natural Resources (ODNR), Pennsylvania Fish and Boat Commission (PFBC), and New York State Department of Environmental Conservation (NYSDEC). USGS also assisted CLC member agencies with deployment and maintenance of Great Lakes Acoustic Telemetry Observation System (GLATOS) infrastructure throughout all three Lake Erie basins and tributaries, supporting multiple coordinated telemetry investigations. This report presents biomass-based summaries of fish communities in western Lake Erie derived from USGS bottom trawl surveys conducted from 2013 to 2024 during June and September. The survey design compliments the August ODNR- OMNRF effort by reinforcing stock assessments with more robust data. Analyses herein evaluated trends in total biomass, abundance of dominant predator and forage species, non-native species composition, biodiversity, and community structure. Data from this effort are accessible for download (Keretz et al. 2025)

Lake Erie↗

USGS2012

Population ecology of feral horses in an era of fertility control management

Management of wildlife often requires intervention to regulate growth of populations that would otherwise become overabundant. Controlling fecundity using contraceptives has become an increasingly popular tool for attempting to manage locally overabundant wildlife species, but the population-level effects of such applications are largely unknown. Contraceptive treatments can produce unexpected feedbacks that act on births, survival, immigration, and emigration. Such feedbacks may considerably influence our ability to regulate populations using fertility control. I followed feral horses ( Equus caballus ) in three intensively managed populations to assess longitudinal treatment effects on demography. The transient contraceptive porcine zona pellucida (PZP) produced longer duration of infertility than intended. Repeated PZP vaccinations of females extended the duration of infertility far beyond the targeted management period, with time to first post-treatment parturition increasing 411days for every annual inoculation received. When these animals did conceive and give birth, parturition was later in the year and temporally asynchronous with forage abundance. An average of 30% (range=11–77%) of females were contracepted annually during the treatment period in all three populations and apparent annual population growth rate was 4–9% lower in the post-treatment years as compared to pretreatment years. Population growth was positive, however, and increased steadily every year that a management removal did not occur. The observed number of births was 33% fewer than the expected number of births, based on number of treated females, individual efficacy of treatment, and number of untreated females and their age-specific fecundity rates. Only half of this difference was explained by the apparent residual effect of treatment. Birth rate in the youngest untreated females (age 2–5 years old) was reduced in years when their conspecifics were treated, enhancing the effects of treatment at the population-level. This was partially offset by increased survival in adults, including a 300% increase in presence of horses ≥20 years old during the post-treatment period. In closed populations of feral horses, the positive feedbacks appear to outweigh the negative feedbacks and generate a larger contraceptive effect than the sum of individual treatments. The role of fertility control is uncertain for open populations of many wildlife species, with broad consensus across a synthesis of research that negative feedbacks on fertility control performance are occurring, and in many cases increased survival and increased immigration can compensate entirely for the reduction in births attributed to treatment. Understanding species‘ life-history strategies, biology, behavioral ecology, and ecological context is critical to developing realistic expectations of regulating wildlife populations using fertility control.

Thesis↗

USGS1990

Chironomidae of the southeastern United States: a checklist of species and notes on biology, distribution, and habitat

We provide a current listing of the species of midges (Diptera:Chironomidae) in the southeastern United States (Alabama, Florida, Georgia, North Carolina, South Carolina, and Tennessee). This checklist should aid research on this group of insects, which have often proved useful in the assessment of water quality. We document each species' distribution and general habitat and provide the best taxonomic reference to facilitate the identification or description of species in that genus. Changes in nomenclature, unique ecological traits, bibliographic sources, or other items of information are summarized in a paragraph on each genus. Of the 10 sub-families currently recognized in the Chironomidae, 7 occur in the Southeast. The chironomid fauna of the six southeastern States now consist of 164 described genera and 479 described species. In addition we have listed 14 genera and 245 species that are tenatively noted as undescribed.

Fish and Wildlife Research↗

USGS2019

Temporal and abiotic fluctuations may be preventing successful rehabilitation of soil-stabilizing biocrust communities

Land degradation is a persistent ecological problem in many arid and semi-arid systems globally (drylands hereafter). Most instances of dryland degradation include some form of soil disturbance and/or soil erosion, which can hinder vegetation establishment and reduce ecosystem productivity. To combat soil erosion, researchers have identified a need for rehabilitation of biological soil crusts (biocrusts), a globally-relevant community of organisms aggregating the soil surface and building soil fertility. The impact of plant and biocrust cover was tested on soil erosion potential in the piñon-juniper woodlands of Bandelier National Monument, NM. Biocrusts were found to be similarly influential to vascular plants in reducing erosion, largely acting by promoting surface roughness. The potential to rehabilitate biocrusts within the Monument was also tested. In a full factorial design, plots were inoculated on eroding soils before the summer monsoon with greenhouse-cultured biocrusts, and administered the erosion intervention treatments of overland water flow barriers (flashing), slash placement, and seeding of vascular plants. Although significant and dynamic changes to soil stability, penetration resistance, and extractable soil nutrients were observed through time, no strong effects with the addition of inoculum, seeding, or erosion intervention treatments were seen. These results suggest possible ways forward to successfully rehabilitate biocrust, including varying the timing of biocrust application, amending inoculum application with different types of soil stabilization techniques, and adding nutrients to soils. The insights gleaned from the lack of response brings us closer to developing effective techniques to arrest soil loss in these important social-ecological dryland systems.

Ecological Applications↗

USGS2021

Long-term ecosystem and biogeochemical research in Loch Vale watershed, Rocky Mountain National Park, Colorado

Loch Vale watershed was instrumented in 1983 with initial support from the National Acid Precipitation Assessment Program to ask whether ecosystems of Rocky Mountain National Park (RMNP) were affected by acidic atmospheric deposition. Research and monitoring activities were expanded in 1991 by the U.S. Geological Survey Water, Energy, and Biogeochemical Budgets program to understand the processes, and their interactions, controlling water, energy, and biogeochemical fluxes. With help from many collaborators we have characterized trends and patterns in atmospheric deposition, climate, and hydrology, including glaciers and other ice features. Instead of acidic deposition, we documented high atmospheric inputs of reactive nitrogen (Nr), and have studied the ecological consequences in soils, surface water, and vegetation. Using paleolimnology, we documented the onset of human-caused change to lake primary producers ca. 1950 in response to increased Nr deposition and warming. Our results provided the basis for the Colorado Nitrogen Deposition Reduction Plan, a state policy that aims to reduce Nr emissions to protect resources in RMNP by 2032. Carbon cycle research revealed mountain wetlands now release more carbon than they store, and respiration and methane flux occurs even during winter through deep snow packs. Trend analyses found export of Nr to be closely tied to atmospheric inputs, but can lag in response to drought. Current research explores consequences of the combination of warming, changes in precipitation dynamics, and atmospheric deposition of Nr and dust on stream and lake CO 2 dynamics, lake biology and trophic state, and soil carbon composition. Dramatic increases in park visitors have prompted studies on the effects of recreational use on water quality. New tools such as remote sensing and high frequency instream water quality sensors are being applied to lake and stream studies. Monitoring, combined with experiments, models, and spatial comparisons is an essential foundation for science-based resource management.

Colorado↗

USGS2022

Spatial estimates of soil moisture for understanding ecological potential and risk: a case study for arid and semi-arid ecosystems

Soil temperature and moisture (soil-climate) affect plant growth and microbial metabolism, providing a mechanistic link between climate and growing conditions. However, spatially explicit soil-climate estimates that can inform management and research are lacking. We developed a framework to estimate spatiotemporal-varying soil moisture (monthly, annual, and seasonal) and temperature-moisture regimes as gridded surfaces by enhancing the Newhall simulation model. Importantly, our approach allows for the substitution of data and parameters, such as climate, snowmelt, soil properties, alternative potential evapotranspiration equations and air-soil temperature offsets. We applied the model across the western United States using monthly climate averages (1981–2010). The resulting data are intended to help improve conservation and habitat management, including but not limited to increasing the understanding of vegetation patterns (restoration effectiveness), the spread of invasive species and wildfire risk. The demonstrated modeled results had significant correlations with vegetation patterns—for example, soil moisture variables predicted sagebrush (R 2 = 0.51), annual herbaceous plant cover (R 2 = 0.687), exposed soil (R 2 = 0.656) and fire occurrence (R 2 = 0.343). Using our framework, we have the flexibility to assess dynamic climate conditions (historical, contemporary or projected) that could improve the knowledge of changing spatiotemporal biotic patterns and be applied to other geographic regions.

Land↗

USGS2019

Identifying the molecular signatures of agricultural expansion in Amazonian headwater streams

Agricultural impacts on aquatic ecosystems are well-studied, however, most research has focused on temperate regions, whereas the forefront of agricultural expansion is currently in the tropics. At the vanguard of this growth is the boundary between the Amazon and Cerrado biomes in Brazil, driven primarily by expansion of soybean and corn croplands. Here we examine the impacts of cropland expansion on receiving lowland Amazon Basin headwater streams in terms of dissolved organic carbon (DOC) concentration and dissolved organic matter (DOM) composition via ultra-high resolution mass spectrometry. Streams draining croplands had lower DOC concentrations and DOM molecular signatures enriched in N- and S-containing formula in comparison to forested streams. Cropland streams were also enriched in aliphatic, peptide-like and highly unsaturated and phenolic (low O/C) compound categories in comparison to forest streams (enriched in polyphenolics, condensed aromatics and highly unsaturated and phenolic (high O/C) compound categories) indicative of the shifting of sources from organic-rich surface soils and litter layers to autochthonous and more microbial biomass. Distinct molecular assemblages were strongly correlated with cropland and forest catchments, highlighting headwater streams as sentinels for detecting change. On investigation of unique molecular formulae present in only cropland sites, four cropland markers provided the ability to track agricultural impacts in the region. Overall, these patterns indicate reduced organic matter inputs in croplands and greater microbial degradation at these sites leading to declining DOC concentrations, and DOM of more microbial character in receiving streams that is more biolabile, with clear ramifications for downstream ecology and biogeochemical cycles.

Amazon River basin, Tanguro Ranch, Xinga River↗