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USGS2016

Accuracy assessment/validation methodology and results of 2010–11 land-cover/land-use data for Pools 13, 26, La Grange, and Open River South, Upper Mississippi River System

Introduction/Background The U.S. Geological Survey (USGS)-Upper Midwest Environmental Sciences Center (UMESC) was responsible for development of several land cover/land use (LCU) systemic datasets of the Upper Mississippi River System (UMRS). These efforts (1989 and 2000) were funded by the U.S. Army Corps of Engineers’ Upper Mississippi River Restoration Program (UMRR) Long Term Resource Monitoring (LTRM) element. Development of systemic datasets includes the acquisition, processing, and serving of high-resolution aerial photography and land cover/land use spatial datasets ( http://www.umesc.usgs.gov/data_library/land_cover_use/land_cover_use_data.html ). In 2008, the UMRR reached a collaborative agreement with the U.S. Fish and Wildlife Service-Region 3 to collect high-resolution digital imagery of the entire UMRS floodplain during 2010–11 for LTRM. The UMESC helped acquire, process, and serve this imagery, as well as produce and serve the 2010–11 LCU systemic dataset of the UMRS floodplain. Digital imagery for Pools 13, 26, La Grange, and Open River South was collected using an Applanix DSS 439 digital sensor system with a 40 millimeter lens and Color Infrared (CIR) filter. The imagery was collected at a resolution of 20 centimeters/pixel (8 inches/pixel) for Pool 13 and 40 centimeters/pixel (16 inches/pixel) for Pools 26, Open River South, and La Grange. All imagery was projected to Universal Transverse Mercator (UTM) Zone 15, North American Datum of 1983 (NAD 83). The General Wetland Vegetation Classification (GWVC) system used for mapping is hierarchical, and its 31 classes can be collapsed into broader categories using either a 15- or 7-class level. While the 1989 and 2000 LCU systemic datasets have not gone through a traditional thematic accuracy assessment (AA) in the past, nor have they undergone a validation analysis, the end products are of high quality. For each systemic dataset produced (1989, 2000, 2010–11), extensive field reconnaissance is performed before photointerpretation. The intent of this field reconnaissance is to learn, test, and verify image signatures as they relate to vegetation types. Questionable areas on the imagery are visited, and the plants or land features observed in the area are recorded for reference. This procedure verifies vegetation signatures on the imagery with those on the ground. In addition, once the photointerpretation is complete, the final LCU dataset undergoes extensive quality assurance/quality control to ensure the imagery is mapped correctly. Since the 2000 LCU systemic dataset was developed, there has been a growing interest in completing thematic AAs for the LTRM LCU spatial datasets. The objective of an AA is to measure the probability that a particular location has been assigned its correct vegetation class. An AA estimates thematic (map class) errors in the data, giving users information needed to determine data suitability for a particular application. At the same time, data producers are able to learn more about the nature of errors in the data. Thus, the two attributes of an AA are “producers’ accuracy,” which is the probability that an AA point has been mapped correctly (also referred to as an error of omission); and “users’ accuracy,” which is the probability that the map actually represents what was found on the ground (also referred to as error of commission). Producers’ and users’ accuracies can be obtained from the same set of data by using different analyses. Accuracy assessment is an extensive effort that requires seasonal field personnel and equipment, data entry, analyses, and post processing—tasks that are costly and time consuming. The geospatial team at the UMESC has suggested a validation process for understanding the accuracy of the spatial datasets, which will be tested on at least some areas of the UMRS. Validation is not a true verification of map-class type in the field; however, it can provide the user of the map with useful information that is similar to a field AA. Similar to an AA, validation involves generating random points based on the total area for each map class. However, instead of collecting field data, two or three individuals not involved with the photo-interpretative mapping separately review each of the points onscreen and record a best-fit vegetation type(s) for each site. Once the individual analyses are complete, results are joined together and a comparative analysis is performed. The objective of this initial analysis is to identify areas where the validation results were in agreement (matches) and areas where validation results were in disagreement (mismatches). The two or three individuals then perform an analysis, looking at each mismatched site, and agree upon a final validation class. (If two vegetation types at a specific site appear to be equally prevalent, the validation team is permitted to assign the site two best-fit vegetation types.) Following the validation team’s comparative analysis of vegetation assignments, the data are entered into a database and compared to the mappers’ vegetation assignments. Agreements and disagreements between the map and validation classes are identified, and a contingency table is produced. This document presents the AA processes/results for Pools 13 and La Grange, as well as the validation process/results for Pools 13 and 26 and Open River South.

Iowa, Illinois, Minnesota, Missouri, Wisconsin↗

USGS2026

Future aquatic invaders of the Northeast U.S.: How climate change, human vectors, and natural history could bring southern and western species north

As environmental conditions change, land managers are increasingly concerned about the potential for new aquatic invasive species to move into their jurisdictions. Because managers may have limited resources, detecting invasive species early is important as prevention is more effective and less costly than ongoing mitigation of established populations. Tools built to assist early detection efforts often use information on pathways of spread (how species move through a landscape) and maps of suitability (where habitat allows a species to live and reproduce). While each is useful, information on pathways or suitability alone provides only a part of the story of invasion risk. To better anticipate the risk of invasive species expanding their ranges into the Northeast U.S., there is a need to improve the way we combine and use pathways and suitability information, especially across large areas (e.g., states, regions). To fill this need, we took a new approach that combines estimates of current and future suitability with a diverse variety of pathways that gives us invasion risk scores for more than 100 freshwater invaders (fishes, plants, and invertebrates) across the Northeast U.S. In this report, we provide an overview of our methodology, results, and a description of the ongoing work to make the data publicly available. This work can be used to aid early detection efforts and associated management activities at state and local levels, including the identification of invasion risk hotspots and ranking of individual species risk to help anticipate and prevent invader establishment.

northeast United States↗

USGS2011

Land use and habitat conditions across the southwestern Wyoming sagebrush steppe: development impacts, management effectiveness and the distribution of invasive plants

For the past several years, USGS has taken a multi-faceted approach to investigating the condition and trends in sagebrush steppe ecosystems. This recent effort builds upon decades of work in semi-arid ecosystems providing a specific, applied focus on the cumulative impacts of expanding human activities across these landscapes. Here, we discuss several on-going projects contributing to these efforts: (1) mapping and monitoring the distribution and condition of shrub steppe communities with local detail at a regional scale, (2) assessing the relationships between specific, land-use features (for example, roads, transmission lines, industrial pads) and invasive plants, including their potential (environmentally defined) distribution across the region, and (3) monitoring the effects of habitat treatments on the ecosystem, including wildlife use and invasive plant abundance. This research is focused on the northern sagebrush steppe, primarily in Wyoming, but also extending into Montana, Colorado, Utah and Idaho. The study area includes a range of sagebrush types (including, Artemisia tridentata ssp. tridentata, Artemisia tridentata ssp. wyomingensis, Artemisia tridentata ssp. vaseyana, Artemisia nova) and other semi-arid shrubland types (for example, Sarcobatus vermiculatus, Atriplex confertifolia, Atriplex gardneri), impacted by extensive interface between steppe ecosystems and industrial energy activities resulting in a revealing multiple-variable analysis. We use a combination of remote sensing (AWiFS (1 Any reference to platforms, data sources, equipment, software, patented or trade-marked methods is for information purposes only. It does not represent endorsement of the U.S.D.I., U.S.G.S. or the authors), Landsat and Quickbird platforms), Geographic Information System (GIS) design and data management, and field-based, replicated sampling to generate multiple scales of data representing the distribution of shrub communities for the habitat inventory. Invasive plant sampling focused on the interaction between human infrastructure and weedy plant distributions in southwestern Wyoming, while also capturing spatial variability associated with growing conditions and management across the region. In a separate but linked study, we also sampled native and invasive composition of recent and historic habitat treatments. Here, we summarize findings of this ongoing work, highlighting patterns and relationships between vegetation (native and invasive), land cover, landform, and land-use patterns in the sagebrush steppe.

Wyoming↗

USGS2011

Chapter 4: A sampling and analytical approach to develop spatial distribution models for sagebrush-associated species

Understanding multi-scale floral and faunal responses to human land use is crucial for informing natural resource management and conservation planning. However, our knowledge on how land use influences sagebrush (Artemisia spp.) ecosystems is limited primarily to site-specific studies. To fill this void, studies across large regions are needed that address how species are distributed relative to type, extent, and intensity of land use. We present a study design for the Wyoming Basin Ecoregional Assessment (WBEA) to sample sagebrush-associated flora and fauna along a land cover-human land use gradient. To minimize field costs, we sampled various taxonomic groups simultaneously on transects (ungulates and lagomorphs), point counts (song birds), and area-searches of 7.29-ha survey blocks (pellet counts, burrow counts, reptile surveys, medium-sized mammals, ant mounds, rodent trapping, and vegetation sampling of native and exotic plants). We then present an exploratory approach to develop species occurrence and abundance models when a priori model building is not an option. Our study design has broad applications for large-scale evaluations of arid ecosystems.

Wyoming↗

USGS2016

Filling the interspace—restoring arid land mosses: source populations, organic matter, and overwintering govern success

Biological soil crusts contribute to ecosystem functions and occupy space that could be available to invasive annual grasses. Given disturbances in the semiarid shrub steppe communities, we embarked on a set of studies to investigate restoration potential of mosses in sagebrush steppe ecosystems. We examined establishment and growth of two moss species common to the Great Basin, USA: Bryum argenteum and Syntrichia ruralis from two environmental settings (warm dry vs. cool moist). Moss fragments were inoculated into a third warm dry setting, on bare soil in spring and fall, both with and without a jute net and with and without spring irrigation. Moss cover was monitored in spring seasons of three consecutive years. Both moss species increased in cover over the winter. When Bryum received spring irrigation that was out of sync with natural precipitation patterns, moss cover increased and then crashed, taking two seasons to recover. Syntrichia did not respond to the irrigation treatment. The addition of jute net increased moss cover under all conditions, except Syntrichia following fall inoculation, which required a second winter to increase in cover. The warm dry population of Bryum combined with jute achieved on average 60% cover compared to the cool moist population that achieved only 28% cover by the end of the study. Differences were less pronounced for Syntrichia where moss from the warm dry population with jute achieved on average 51% cover compared to the cool moist population that achieved 43% cover by the end of the study. Restoration of arid land mosses may quickly protect soils from erosion while occupying sites before invasive plants. We show that higher moss cover will be achieved quickly with the addition of organic matter and when moss fragments originate from sites with a climate that is similar to that of the restoration site.

Ecology and Evolution↗

USGS2017

Production and disposal of waste materials from gas and oil extraction from the Marcellus Shale Play in Pennsylvania

The increasing world demand for energy has led to an increase in the exploration and extraction of natural gas, condensate, and oil from unconventional organic-rich shale plays. However, little is known about the quantity, transport, and disposal method of wastes produced during the extraction process. We examined the quantity of waste produced by gas extraction activities from the Marcellus Shale play in Pennsylvania for 2011. The main types of wastes included drilling cuttings and fluids from vertical and horizontal drilling and fluids generated from hydraulic fracturing [i.e., flowback and brine (formation) water]. Most reported drill cuttings (98.4%) were disposed of in landfills, and there was a high amount of interstate (49.2%) and interbasin (36.7%) transport. Drilling fluids were largely reused (70.7%), with little interstate (8.5%) and interbasin (5.8%) transport. Reported flowback water was mostly reused (89.8%) or disposed of in brine or industrial waste treatment plants (8.0%) and largely remained within Pennsylvania (interstate transport was 3.1%) with little interbasin transport (2.9%). Brine water was most often reused (55.7%), followed by disposal in injection wells (26.6%), and then disposed of in brine or industrial waste treatment plants (13.8%). Of the major types of fluid waste, brine water was most often transported to other states (28.2%) and to other basins (9.8%). In 2011, 71.5% of the reported brine water, drilling fluids, and flowback was recycled: 73.1% in the first half and 69.7% in the second half of 2011. Disposal of waste to municipal sewage treatment plants decreased nearly 100% from the first half to second half of 2011. When standardized against the total amount of gas produced, all reported wastes, except flowback sands, were less in the second half than the first half of 2011. Disposal of wastes into injection disposal wells increased 129.2% from the first half to the second half of 2011; other disposal methods decreased. Some issues with data were uncovered during the analytical process (e.g., correct geospatial location of disposal sites and the proper reporting of end use of waste) that obfuscated the analyses; correcting these issues will help future analyses.

Pennsylvania↗

USGS2006

Coupled nitrogen and calcium cycles in forests of the Oregon Coast Range

Nitrogen (N) is a critical limiting nutrient that regulates plant productivity and the cycling of other essential elements in forests. We measured foliar and soil nutrients in 22 young Douglas-fir stands in the Oregon Coast Range to examine patterns of nutrient availability across a gradient of N-poor to N-rich soils. N in surface mineral soil ranged from 0.15 to 1.05% N, and was positively related to a doubling of foliar N across sites. Foliar N in half of the sites exceeded 1.4% N, which is considered above the threshold of N-limitation in coastal Oregon Douglas-fir. Available nitrate increased five-fold across this gradient, whereas exchangeable magnesium (Mg) and calcium (Ca) in soils declined, suggesting that nitrate leaching influences base cation availability more than soil parent material across our sites. Natural abundance strontium isotopes (87Sr/86Sr) of a single site indicated that 97% of available base cations can originate from atmospheric inputs of marine aerosols, with negligible contributions from weathering. Low annual inputs of Ca relative to Douglas-fir growth requirements may explain why foliar Ca concentrations are highly sensitive to variations in soil Ca across our sites. Natural abundance calcium isotopes (??44Ca) in exchangeable and acid leachable pools of surface soil measured at a single site showed 1 per mil depletion relative to deep soil, suggesting strong Ca recycling to meet tree demands. Overall, the biogeochemical response of these Douglas-fir forests to gradients in soil N is similar to changes associated with chronic N deposition in more polluted temperate regions, and raises the possibility that Ca may be deficient on excessively N-rich sites. We conclude that wide gradients in soil N can drive non-linear changes in base-cation biogeochemistry, particularly as forests cross a threshold from N-limitation to N-saturation. The most acute changes may occur in forests where base cations are derived principally from atmospheric inputs. ?? 2006 Springer Science+Business Media, Inc.

Ecosystems↗

USGS2025

Costs of land treatments on public lands in the western United States

Public land managers often conduct rehabilitation and restoration actions to achieve desired conditions or specific natural resource objectives. These “land treatments” include a variety of techniques, such as biomass removal or manipulation, seeding, and herbicide application. Limited information exists on the costs of conducting many common types of land treatments, but such information can be paired with treatment effectiveness data to prioritize application of limited resources where they may have the greatest benefit and improve efficiency. Here, we investigated cost information recorded in the Land Treatment Digital Library, a catalog of legacy land treatment information on public lands managed by the U.S. Department of the Interior's Bureau of Land Management. Based on 1,701 treatment records across eleven western U.S. states, we developed empirical per-acre cost estimates for representative land treatments in eight categories: three seeding categories (aerial seeding, drill seeding, and seedling planting), prescribed burning, soil disturbance, soil stabilization, vegetation disturbance, and weed control. We evaluated spatio-temporal factors that may be associated with variation in treatment costs and found strong evidence for nonlinear decreases in per-acre costs as treatment areas increased and that per-acre treatment costs have increased in real terms in recent decades. We also found evidence that per-acre costs for drill seeding, prescribed burns, and soil stabilization increased with the average slope of the terrain of a treated area and that per-acre costs for prescribed burns, seedling planting, and soil stabilization were influenced by distance to urban areas or major roads. These results can inform planning, prioritization, and assessment of common land treatments on public lands in the western United States, in particular supporting greater consideration of costs and cost effectiveness.

Rangeland Ecology & Management↗

USGS2008

Families of miocene monterey crude oil, seep, and tarball samples, coastal California

Biomarker and stable carbon isotope ratios were used to infer the age, lithology, organic matter input, and depositional environment of the source rocks for 388 samples of produced crude oil, seep oil, and tarballs to better assess their origins and distributions in coastal California. These samples were used to construct a chemometric (multivariate statistical) decision tree to classify 288 additional samples. The results identify three tribes of 13C-rich oil samples inferred to originate from thermally mature equivalents of the clayey-siliceous, carbonaceous marl and lower calcareous-siliceous members of the Monterey Formation at Naples Beach near Santa Barbara. An attempt to correlate these families to rock extracts from these members in the nearby COST (continental offshore stratigraphic test) (OCS-Cal 78-164) well failed, at least in part because the rocks are thermally immature. Geochemical similarities among the oil tribes and their widespread distribution support the prograding margin model or the banktop-slope-basin model instead of the ridge-and-basin model for the deposition of the Monterey Formation. Tribe 1 contains four oil families having geochemical traits of clay-rich marine shale source rock deposited under suboxic conditions with substantial higher plant input. Tribe 2 contains four oil families with traits intermediate between tribes 1 and 3, except for abundant 28,30-bisnorhopane, indicating suboxic to anoxic marine marl source rock with hemipelagic input. Tribe 3 contains five oil families with traits of distal marine carbonate source rock deposited under anoxic conditions with pelagic but little or no higher plant input. Tribes 1 and 2 occur mainly south of Point Conception in paleogeographic settings where deep burial of the Monterey source rock favored petroleum generation from all three members or their equivalents. In this area, oil from the clayey-siliceous and carbonaceous marl members (tribes 1 and 2) may overwhelm that from the lower calcareous-siliceous member (tribe 3) because the latter is thinner and less oil-prone than the overlying members. Tribe 3 occurs mainly north of Point Conception where shallow burial caused preferential generation from the underlying lower calcareous-siliceous member or another unit with similar characteristics. In a test of the decision tree, 10 tarball samples collected from beaches in Monterey and San Mateo counties in early 2007 were found to originate from natural seeps representing different organofacies of Monterey Formation source rock instead from one anthropogenic pollution event. The seeps apparently became more active because of increased storm activity. Copyright ?? 2008. The American Association of Petroleum Geologists. All rights reserved.

American Association of Petroleum Geologists Bulle↗

USGS2022

Natural and anthropogenic factors influencing nesting ecology of the American crocodile in Florida, United States

Nesting ecology of American crocodiles ( Crocodylus acutus ) in Florida has been both positively and negatively influenced by anthropogenic and natural factors since the species was placed on the federally endangered species list in 1975. This includes a shift in nesting sites and an expansion of nesting to anthropogenic habitat. Using a 50-year record of monitoring data (1970-2020), we assessed factors influencing nesting ecology (number of nests, nest morphology, success rate, and habitat use) from a total of 3,013 nests recorded across South Florida. We detected a change in nesting success rate, increasing from 61% in the 1970’s to near 90% since 2010. Our hot spot analysis illustrates that nesting sites in northeastern Florida Bay and Flamingo/Cape Sable (Everglades National Park) were important for American crocodiles. Anthropogenic habitats, such as canals provided vital habitat nesting in areas such as Flamingo/Cape Sable (Everglades National Park), Turkey Point Power Plant, and Crocodile Lake National Wildlife Refuge for the current Florida population. Environmental parameters suspected to affect nesting success have shown an increasing trend over the past 50 years and minimum temperature and rainfall, during the summer season, are correlated with increased nesting success and temporal variation across South Florida. The adaptive capacity that American crocodiles exhibited in Florida gave the species advantages to face changes in climate and landscape over the last 50 years, however, it does not imply that the adaptive capacity of the species to face these changes (evolutionary potential) cannot reach a limit if changes continue. Here, we document C. acutus nesting ecology population responses to ecosystem restoration efforts in Florida; and further demonstrate the value of protecting and restoring habitat to support recovery of listed species.

Florida↗

USGS2013

Identification of metrics to monitor salt marsh integrity on National Wildlife Refuges in relation to conservation and management objectives

Executive Summary Most salt marshes in the US have been degraded by human activities, and threats from physical alterations, surrounding land-use, species invasions, and global climate change persist. Salt marshes are unique and highly productive ecosystems with high intrinsic value to wildlife, and many National Wildlife Refuges (NWRs) have been established in coastal areas to protect large tracts of salt marsh and wetland-dependent species. Various management practices are employed routinely on coastal NWRs to restore and enhance marsh integrity and ensure ecosystem sustainability. Prioritizing NWR salt marshes for application of management actions and choosing among multiple management options requires scientifically-based methods for assessing marsh condition. Monitoring is integral to structured decision-making (SDM), a formal process for decomposing a decision into its essential elements. Within a natural resource context, SDM involves identifying management objectives, alternative management actions, and expected management outcomes. The core of SDM is a set of criteria for measuring system performance and evaluating management responses. Therefore, use of SDM to frame natural resource decisions leads to logical selection of monitoring attributes that are linked explicitly to management needs. We used SDM to guide selection of variables for monitoring the ecological integrity of salt marshes within the National Wildlife Refuge System (NWRS). Our objectives were to identify indicators of salt marsh integrity that are effective across large geographic regions, responsive to a wide range of threats, and feasible to implement within funding and staffing constraints of the NWRS. In April, 2008, we engaged interdisciplinary experts in a week-long rapid prototyping SDM workshop to define the essential elements of salt marsh management decisions on refuges throughout the northeastern, southwestern, and northwestern US, corresponding to respective Regions 5, 2, and 1 of the US Fish and Wildlife Service (FWS). Through this process we identified measurable attributes for monitoring salt marsh ecosystems that are integrated into conservation practice and target management objectives. The following salt marsh attributes were identified through the SDM process either for describing state condition to determine management needs or for evaluating the achievement of management objectives: historical condition and geomorphic setting; ditch density; surrounding land use; ratio of open water area to vegetation area; rate of pesticide application; environmental contaminant concentration; change in marsh surface elevation relative to sea level rise; tidal range and groundwater level; surface topography; salinity; and species composition and abundance of vegetation, invasive species, invertebrates, nekton, and breeding and wintering birds. The identified attributes were too broadly defined to serve as operational monitoring variables. Therefore, we tested specific metrics for quantifying most of these attributes in summers of 2008 and 2009. The first four attributes in the above list can be characterized by office-based analysis of existing GIS data layers. The remaining attributes require field-based methods for assessment. We were forced to exclude a small number of attributes from field tests due to inconsistent data (pesticide application rate, environmental contaminant concentrations) or requirements that exceeded the scope of this project (change in marsh surface elevation; surface topography; benthic invertebrates; wintering birds). We evaluated potential metrics for evaluating all remaining field attributes. In partnership with NWRS biologists, we tested rapid versus intensive metrics for monitoring field attributes (tidal range and groundwater level; marsh surface elevation; salinity; and species composition and abundance of vegetation, invasive species, nekton, and breeding birds) at coastal refuges throughout FWS Region 5. Seven refuges participated in metric testing in 2008: Rachel Carson (ME), Parker River (MA), Wertheim (NY), E. B. Forsythe (NJ), Bombay Hook (DE), Prime Hook (DE), and Eastern Shore of Virginia Complex (VA). These seven and two additional refuges participated in metric testing in 2009: Rhode Island Complex (RI) and Stewart B. McKinney (CT). We based all field metrics on existing protocols for salt marsh assessment. Sampling locations were determined randomly within delineated marsh study units (MSUs) at each refuge. Detailed field methods are provided in appendices to this report. Measurements for individual metrics were averaged across samples within MSUs during each year of sampling. Each year, correlation or regression analysis was conducted on average measurements across MSUs within each attribute set to identify redundant metrics. Statistical redundancy between a pair of metrics within an attribute set (i.e., correlation or regression slopes with p-values < 0.05) was considered justification for eliminating one of the pair from the regional set of monitoring metrics. Decisions regarding metric elimination versus retention were based on feasibility of monitoring, considering such factors as sampling time, resources required, and potential for regional standardization in implementation. The result of these tests is a reduced suite of monitoring metrics that targets NWRS management decisions and is practicable for implementing on a regional scale. Based on these tests, we recommend the following list of metrics for monitoring integrity of NWRS salt marshes (marsh attribute category is in parentheses): (historical condition and geomorphic setting) position of marsh in the landscape, marsh shape, degree of fill and/or fragmentation, degree of tidal flushing, amount of aquatic edge; (ditch density) ranking of ditch density from none to severe; (surrounding land use) relative proportion of agricultural land in a 150-m buffer around the marsh, relative proportion of natural land in a 150-m buffer around the marsh, relative proportion of natural land in a 1-km buffer around the marsh; (ratio of open water area to vegetation area) ratio of open water to emergent herbaceous wetlands within the marsh; (marsh surface elevation) elevation referenced to NAVD88 in a representative area of the marsh; (tidal range and groundwater level) percent of time the marsh surface is flooded during deployment of a continuous water-level monitor at a representative marsh location, mean depth of surface flooding as measured by a continuous water-level monitor at a representative location; (salinity) salinity measured in surface water; (vegetation community) vegetation species richness using the point-intercept method in 100-m diameter survey plots, percent cover of various marsh community types within 100-m diameter survey plots; (invasive species abundance) percent cover of invasive plant species measured using the point-intercept method in 100-m diameter survey plots; (nekton community) nekton density, nekton species richness, length of Fundulus heteroclitus ; (breeding bird community) abundance of Willets counted per point during standard call-broadcast surveys, summed abundance of tidal marsh obligate species (Clapper Rail, Willet, Saltmarsh Sparrow, Seaside Sparrow) counted per point during standard call-broadcast surveys. Metrics describing the historical condition, geomorphic setting, and broad landscape features can be assessed using existing GIS databases. Our results support use of rapid methods to assess the majority of field metrics; only those used to describe the nekton community must be measured using intensive methods (throw traps or ditch nets, dependant on habitat configuration). Implementation of these metrics for quantitative assessment of NWRS salt marsh integrity in FWS Region 5 requires developing sampling designs for each refuge. Additionally, it is important to determine how the monitoring information will be used within a management context. SDM should be used to complete the analysis of salt marsh management decisions. The next steps would involve 1) prioritizing and weighting the management objectives; 2) predicting responses to individual management actions in terms of objectives and metrics; 3) using multiattribute utility theory to convert all measurable attributes to a common utility scale; 4) determining the total management benefit of each action by summing utilities across objectives; and 5) maximizing the total management benefits within cost constraints for each refuge. This process would allow the optimum management decisions for NWRS salt marshes to be selected and implemented based directly on monitoring data and current understanding of marsh responses to management actions. Monitoring the outcome of management actions would then allow new monitoring data to be incorporated into subsequent decisions.

Connecticut, Delaware, Maine, Massachusetts, New J↗

USGS2024

Colorado Delta riparian plant health improvement

The riparian corridor along Mexico’s arid Colorado River Delta is being affected by reduction in river flow and increases in heat, drought, human infrastructure, and disturbances. These disturbances can change riparian land cover by limiting water availability for riparian plant species, increasing fire intensity and frequency, and increasing soil and water salinities. In response to these forms of degradation, restoration efforts have begun to restore riparian habitats and native plant health, but vegetation greenness and corresponding plant water use continue to decline in unrestored reaches. Researchers from the U.S. Geological Survey (USGS) Southwest Biological Science Center are monitoring riparian plant health along the Colorado River Delta to support better ecohydrological decision-making. The researchers are helping a binational team to protect, restore, and maintain native vegetation within the 150-km long riparian corridor. Researchers are using Landsat 8 Operational Land Imager (OLI) data spanning 2014–2022 to measure greenness, a proxy for plant health, and actual evapotranspiration (ETa). Using an empirical model for ETa, evapotranspiration is estimated over each 16-day Landsat 8 OLI overpass period by considering the 8 days before and after the overpass date. In their paper, researchers noted an increase in vegetation greenness within the restoration sites over nine years, with an average increase of 41.3%, which may be partially due to targeted water deliveries at the restoration sites. Conversely, greenness in adjacent, unrestored control areas declined by 27.3%. The study showed a 22.1% increase in ETa in restored areas, compared to a 30.8% reduction in unrestored regions. Restored sites in one restored area experienced ETa increases up to 12.2%, whereas their unrestored counterparts showed a decline of 21.4%. These estimates of riparian greenness and water use may assist natural resource managers who are tasked with allocating water and managing habitats within similar riparian corridors.

Conference Paper↗

USGS2023

Forecasting natural regeneration of sagebrush after wildfires using population models and spatial matching

Context Addressing ecosystem degradation in the Anthropocene will require ecological restoration across large spatial extents. Identifying areas where natural regeneration will occur without direct resource investment will improve scalability of restoration actions. Objectives An ecoregion in need of large scale restoration is the Great Basin of the Western US, where increasingly large and frequent wildfires threaten ecosystem integrity and its foundational shrub species. We develop a framework to forecast where post-wildfire regeneration of sagebrush cover ( Artemisia spp.) is likely to occur within the burnt areas across the region (> 900,000 km 2 ). Methods First, we parameterized population models using Landsat satellite-derived time series of sagebrush cover. Second, we evaluated the out-of-sample performance by predicting natural regeneration in wildfires not used for model training. This model assessment reproduces a management-oriented scenario: making restoration decisions shortly after wildfires with minimal local information. Third, we asked how accounting for increasingly fine-scale spatial heterogeneity could improve model forecasting accuracy. Results Regional-level models revealed that sagebrush post-fire recovery is slow, estimating > 80-year time horizon to reach an average cover at equilibrium of 16.6% (CI95% 9–25). Accounting for wildfire and within-wildfire spatial heterogeneity improved out-of-sample forecasts, resulting in a mean absolute error of 3.5 ± 4.3% cover, compared to the regional model with an error of 7.2 ± 5.1% cover. Conclusions We demonstrate that combining population models and non-parametric spatial matching provides a flexible framework for forecasting plant population recovery. Models for population recovery applied to Landsat-derived time series will assist restoration decision-making, including identifying priority targets for restoration.

Great Basin↗

USGS2002

FTIR and py-GC-MS spectra of true-fern and seed-fern sphenopterids (Sydney Coalfield, Nova Scotia, Canada, Pennsylvanian)

Sphenopterid specimens from the Late Pennsylvanian of Sydney Coalfield, Canada, are investigated by FTIR and py-GC-MS techniques as part of an on-going research project into the biochemistry and chemotaxonomy of Pennsylvanian-age pteridophylls. Included in the investigation are samples of the true-fern species Oligocarpia brongniartii and Zeilleria delicatula that are preserved as naturally macerated cuticles (NMC), and the seed-fern Eusphenopteris neuropteroides that is also preserved as a compression/impression. FTIR spectra of NMC seed-fern E. neuropteroides, and fern sphenopterid O. brongniartii are very similar, except that the latter does not have aromatic bands in the 700-900 cm-1 out-of-plane region, py-GC-MS show more aromatic compounds for the seed fern than for the two true-fern sphenopterids. Another difference between seed-fern and true-fern sphenopterids is a lower ratio of CH2 to CH3 in chemically treated specimens (CTC) for the seed fern. These observations suggest slightly higher aromaticity for the seed ferns, perhaps related to some chemotaxonomic differences. Comparison of FTIR and py-GC-MS characteristics of sphenopterids and other plant groups shows that these two techniques have potential to identifying chemotaxonomic signals from Carboniferous pteridophylls in general, although more data are needed to confirm this. ?? 2002 Elsevier Science B.V. All rights reserved.

International Journal of Coal Geology↗

USGS2024

Climate-induced tree-mortality pulses are obscured by broad-scale and long-term greening

Vegetation greening has been suggested to be a dominant trend over recent decades, but severe pulses of tree mortality in forests after droughts and heatwaves have also been extensively reported. These observations raise the question of to what extent the observed severe pulses of tree mortality induced by climate could affect overall vegetation greenness across spatial grains and temporal extents. To address this issue, here we analyse three satellite-based datasets of detrended growing-season normalized difference vegetation index (NDVI GS ) with spatial resolutions ranging from 30 m to 8 km for 1,303 field-documented sites experiencing severe drought- or heat-induced tree-mortality events around the globe. We find that severe tree-mortality events have distinctive but localized imprints on vegetation greenness over annual timescales, which are obscured by broad-scale and long-term greening. Specifically, although anomalies in NDVI GS (ΔNDVI) are negative during tree-mortality years, this reduction diminishes at coarser spatial resolutions (that is, 250 m and 8 km). Notably, tree-mortality-induced reductions in NDVI GS (|ΔNDVI|) at 30-m resolution are negatively related to native plant species richness and forest height, whereas topographic heterogeneity is the major factor affecting ΔNDVI differences across various spatial grain sizes. Over time periods of a decade or longer, greening consistently dominates all spatial resolutions. The findings underscore the fundamental importance of spatio-temporal scales for cohesively understanding the effects of climate change on forest productivity and tree mortality under both gradual and abrupt changes.

Nature Ecology & Evolution↗

USGS2022

Divergent responses of butterflies and bees to burning and grazing management in tallgrass prairies

Butterflies and bees contribute significantly to grassland biodiversity and play important roles as pollinators and herbivores. Grassland conservation and management must be seen through the lens of insect conservation and management if these species are to thrive. In North America, grasslands are a product of climate and natural disturbances such as fire and grazing. These natural disturbances have changed considerably since European colonization and subsequent landscape fragmentation. The aim of this study was to better understand the impacts of fire and grazing management on butterfly and bee communities in tallgrass prairie, enabling land managers and conservationists to better protect and manage remnant prairie. We examined butterfly and bee abundance, species richness, and diversity in Minnesota tallgrass prairies managed by grazing or fire. In 2016 and 2017, we surveyed butterflies, bees, vegetation, and surrounding land use at 20 remnant prairies (10 burned and 10 grazed) with known management histories. Butterfly and bee abundance at our study sites were significantly negatively correlated. Butterfly abundance, but not species richness, was higher in burned than grazed prairies, and prairie-associated grass-feeding butterflies were more abundant at sites with higher plant species richness. Bee abundance was unrelated to management type but was higher at sites with sandier soils; bee species richness was positively associated with forb frequency. These findings highlight the challenges of designing management plans tailored to wide groups of pollinators and the potential pitfalls of using one group of pollinators as indicators for another. They also point to the importance of a mosaic of management practices across the prairie landscape.

Minnesota↗

USGS2018

Cadmium isotope fractionation during coal combustion: Insights from two U.S. coal-fired power plants

Coal combustion, one of the principal energy sources of electricity in the United States, produces over 100 million tons of coal combustion products (CCPs) per year in the U.S. The reuse and disposal of CCPs has the potential to release toxic trace elements, including cadmium (Cd), into the environment. In this study, we investigated CCPs, including bottom ash (BA), economizer fly ash (EFA), and fly ash (FA), as well as feed coal (FC) and pulverized coal (PC) collected from two U.S. coal-fired power plants in New Mexico and Ohio with different coal supplies. The New Mexico plant uses high volatile C bituminous, low-sulfur coals mined from the San Juan Basin (Cretaceous Fruitland Formation) and the Ohio plant uses high volatile A bituminous, high-sulfur central Appalachian Basin coals (Upper Pennsylvanian Monongahela Formation). Mineralogical and elemental analysis showed that these CCP samples consist of ∼70% amorphous Al-Si-rich glasses and ∼30% mineral phases of quartz (SiO 2 ) and mullite (Ai 6 Si 2 O 13 ). The Cd isotope compositions (δ 114 Cd, normalized to NIST Cd standard 3108) of FA and EFA samples (ranging from −0.51 to +0.47‰) are distinctively heavier than those of BA samples (−0.75 to −0.52‰) in both power plants. We interpret this Cd isotope difference as a result of Cd condensation from the gas phase during flue gas cooling, instead of evaporation of Cd phase during coal combustion. Cd condensation is the main process to generate the isotopically heavy Cd signatures that preferentially partition on the fine FA particles. We also investigated Cd isotope compositions in different leachate products from a series of batch-leaching experiments with these CCPs, using diluted acetic acid, hydroxyl ammonium chloride, hydrogen peroxide followed by ammonium acetate, and 5% nitric acid, as a possible means to identify CCP-released Cd in the environment. Unusually and significantly heavier Cd isotope compositions were observed in each leachate of FA samples (+1.10 to +7.09‰), which fall far outside from the range of Cd isotope ratios observed in natural soils and rocks, but less so for the EFA samples (−0.43 to +1.18‰). Such an observation is consistent with the interpretation that isotopically heavy Cd preferentially partitions on the fine FA particles after coal combustion and is readily to be released during these leaching experiments. This study demonstrates that high-temperature coal combustion can lead to a very large degree of fractionation of Cd isotopes that can be used as a unique tracer for identifying anthropogenic metal inputs in the environment. The major Cd isotope fractionation process occurs as the Cd gas phase condenses on fine FA particles during the flue gas cooling stage after coal combustion.

New Mexico, Ohio↗

USGS1998

Water-quality assessment of the Central Arizona Basins, Arizona and northern Mexico – Environmental setting and overview of water quality

The Central Arizona Basins study area in central and southern Arizona and northern Mexico is one of 60 study units that are part of the U.S. Geological Survey's National Water-Quality Assessment program. The purpose of this report is to describe the physical, chemical, and environmental characteristics that may affect water quality in the Central Arizona Basins study area and present an overview of water quality. Covering 34,700 square miles, the study area is characterized by generally north to northwestward-trending mountain ranges separated by broad, gently sloping alluvial valleys. Most of the perennial rivers and streams are in the northern part of the study area. Rivers and streams in the south are predominantly intermittent or ephemeral and flow in response to precipitation such as summer thunderstorms. Effluent-dependent streams do provide perennial flow in some reaches. The major aquifers in the study area are in the basin-fill deposits that may be as much as 12,000 feet thick. The 1990 population in the study area was about 3.45 million, and about 61 percent of the total was in Maricopa County (Phoenix and surrounding cities). Extensive population growth over the past decade has resulted in a twofold increase in urban land areas and increased municipal water use; however, agriculture remains the major water use. Seventy-three percent of all water with drawn in the study area during 1990 was used for agricultural purposes. The largest rivers in the study area-the Gila, Salt, and Verde-are perennial near their headwaters but become intermittent downstream because of impoundments and artificial diversions. As a result, the Central Arizona Basins study area is unique compared to less arid basins because the mean surface-water outflow is only 528 cubic feet per second from a total drainage area of 49,650 square miles. Peak flows in the northern part of the study area are the result of snowmelt runoff; whereas, summer thunderstorms account for the peak flows in the southern part. Ground water is the primary water supply in most of Arizona and the only source of drinking water used by communities in the southern half of the study area. Years of overpumping have caused water tables in basin fill to drop below once-perennial streams leaving streambeds dry, water too deep to pump economically, pumping of poorer quality water with depth, and earth fissures resulting from subsidence after dewatering of sediments. Natural processes-such as leaching of trace elements and major ions from geologic formations-and human activities-such as mining, agriculture, and urban development-have major effects on the quality of surface-water and ground-water resources in the Central Arizona Basins study area. Surface-water quality standards in Arizona are based on the designated use of the water such as full or partial body contact, fish consumption, aquatic and wildlife uses, and agriculture. Maintaining the biological integrity (health) of surface waters in Arizona is an important part of ensuring that these waters are suitable for designated uses. Important water-quality issues for surface water that are somewhat unique to Arizona include: (1) streamflows and riparian environments sustained by effluent from municipal wastewater-treatment plants that contains high concentrations of nutrients, potentially toxic trace elements and organic compounds, and fecal bacteria; (2) industrial, mining, agricultural, and municipal sources of contamination from Mexico; and (3) unpredictable high flows from major summer thunder storms causing stream-channel changes; high suspended-sediment concentrations and loads; sewage overflows; and breaching, erosion, and washout of landfills and mining operations. The quality of water in aquifers that are protected for drinking- water use is subject to standards that are in most cases equal to or more stringent than the primary drinking-water regulations of the U.S. Environmental Protection Agency. The general che

Arizona↗