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USGS2006

Bioenergetic relations in submerged aquatic vegetation: An experimental test of prey use by juvenile bluegills

We experimentally tested the hypotheses that bluegills in vegetated habitats grow more rapidly than in nonvegetated habitats because (1) vegetated habitats contain a greater caloric density and (2) are less susceptible to energetic depletion. The 10-week experiment was conducted in enclosures containing factorial combinations of the presence or absence of Vallisneria americana and juvenile bluegills Lepomis macrochirus. After 6 weeks, Vallisneria-only treatments contained a mean of 1048 cal/m2 in the benthos, whereas treatments with both Vallisneria and bluegills contained 610 cal/m2. Hyalella azteca, a preferred prey of bluegill, were nearly depleted in nonvegetated enclosures, whereas Hyalella densities in enclosures with Vallisneria were much less effected by fish. Bluegill growth was significantly greater with Vallisneria than without but declining water temperatures after week 6 resulted in slower growth despite abundant prey. Ultimately, growth of bluegill resulted from an interaction between availability and ingestion of prey, and water temperature. ?? Munksgaard, 1998.

Ecology of Freshwater Fish↗

USGS1973

Pesticide residues in birds and mammals

SUMMARY: Residues of organochlorine pesticides and their breakdown products are present in the tissues of essentially all wild birds throughout the world. These chemicals accumulate in fat from a relatively small environmental exposure. DDE and dieldrin are most prevalent. Others, such as heptachlor epoxide, chlordane, endrin, and benzene hexachloride also occur, the quantities and kinds generally reflecting local or regional use. Accumulation may be sufficient to kill animals following applications for pest control. This has occurred in several large-scale programmes in the United States. Mortality has also resulted from unintentional leakage of chemical from commercial establishments. Residues may persist in the environment for many years, exposing successive generations of animals. In general, birds that eat other birds, or fish, have higher residues than those that eat seeds and vegetation. The kinetic processes of absorption, metabolism, storage, and output differ according to both kind of chemical and species of animal. When exposure is low and continuous, a balance between intake and excretion may be achieved. Residues reach a balance at an approximate animal body equilibrium or plateau; the storage is generally proportional to dose. Experiments with chickens show that dieldrin and heptachlor epoxide have the greatest propensity for storage, endrin next, then DDT, then lindane. The storage of DDT was complicated by its metabolism to DDE and DDD, but other studies show that DDE has a much greater propensity for storage than either DDD or DDT. Methoxychlor has little cumulative capacity in birds. Residues in eggs reflect and parallel those in the parent bird during accumulation, equilibrium, and decline when dosage is discontinued. Residues with the greatest propensity for storage are also lost most slowly. Rate of loss of residues can be modified by dietary components and is speeded by weight loss of the animal. Under sublethal conditions of continuous exposure to an organochlorine pesticide, the concentrations of residues in the different tissues are ordinarily directly correlated with each other. When the dosage is at lethal levels, or when stored residues are mobilised to lethal levels, the balanced relationship is disrupted. The concentrations of residues in the brain provide the most rigorous criteria for diagnosis of death due to these chemicals, and levels are generally similar across a wide range of species of birds and mammals. Residues in liver are closely correlated with recent dose, either from direct intake or from mobilisation from storage, and so reflect hazardous exposure. Residues in the whole carcass show the storage reserve, and so indicate the potential for adverse effects from lethal mobilisation or from the continuous slow mobilisation that occurs during the normal processes of metabolism and excretion. A synchronous, rapid, and widespread decline in weight and thickness of shells of eggs laid by many species of wild birds occurred in the late 1940's and has persisted. Birds of prey were primarily affected; exceptions apparently are the result of lesser exposure because of different food habits. Many species of fish-eating birds are also affected. Others, however, appear to be more resistant and to accumulate much higher residues before shell-thinning occurs. Seed-eating birds do not appear to have been generally affected; their exposure is ordinarily lower, but physiological factors also seem to be involved. A relationship between shell-thinning and population decline has been established for many species. In exceptional cases, such as the herring gull, persistent re-nesting and other population reactions have overcome adverse effects at the population level. The discovery of shell-thinning among natural populations, and the hypothesis that this thinning was related to the occurrence of organochlorine pesticides, stimulated experimental studies to determine wheth

Book chapter↗

USGS1999

Terrestrial predator alarm vocalizations are a valid monitor of stress in captive brown capuchins (Cebus apella)

The vocal behavior of captive animals is increasingly exploited as an index of well-being. Here we show that the terrestrial predator alarm (TPA) vocalization, a robust and acoustically distinctive anti-predation vocal response present in many mammal and bird species, offers useful information on the relative well-being and stress levels of captive animals. In a 16-week experiment evaluating the effects of varying levels of physical environmental enrichment (control < toys < foraging box < foraging box and toys) in the cages of eight singly housed adult male brown capuchins, we quantified the 1) emission rate of TPAs, 2) proportions of normal and abnormal behavior sample intervals, and 3) fecal and plasma cortisol levels. Variation in TPA emission across the experimental conditions was significant. We found significant reductions in the mean TPA production rate by the group in the enriched (toys, foraging box, and foraging box and toys) compared to the control condition; pre- and post-experimental conditions, however, did not differ from the control condition. Mean TPA production by the group was also significantly positively correlated to mean group levels of fecal cortisol and proportion of abnormal behavior sample intervals, and significantly negatively correlated to the average proportion of normal behavior sample intervals in the group. Based on group means, plasma cortisol levels were positively, but not significantly, related to increasing TPA rate. At the level of the responses of an individual subject, however, the covariation between the vocal and non-vocal behavioral measures and the cortisol assays seldom attained significance. Nevertheless, the direction of the relationships among these parameters within individual subjects typically mirrored those correlations based on group means. At both the group mean and individual levels, our results are consistent with the interpretation that in conditions of low environmental enrichment the study subjects were more stressed, and therefore more reactive to the presence of a threatening terrestrial stimulus (human observer), than when in more enriched conditions. We suggest that protocols to evaluate the effectiveness of enrichment for captive species other than brown capuchins could also profitably exploit TPAs as a first-line monitor or as corroboratory evidence of current well-being.

Zoo Biology↗

USGS2012

VARBOOT: A spatial bootstrap program for semivariogram uncertainty assessment

In applied geostatistics, the semivariogram is commonly estimated from experimental data, producing an empirical semivariogram for a specified number of discrete lags. In a second stage, a model defined by a few parameters is fitted to the empirical semivariogram. As the experimental data are usually few and sparsely located, there is considerable uncertainty about the calculated semivariogram values (uncertainty of the empirical semivariogram) and about the parameters of any model fitted to them (uncertainty of the estimated model parameters). In this paper, the uncertainty in the modeling of the empirical semivariogram is numerically assessed by the generalized bootstrap, which is an extension of the classic bootstrap procedure modified for spatially correlated data. A computer program is described and provided for the assessment of those uncertainties. In particular, the program provides for the empirical semivariogram: the standard errors, the bootstrap percentile confidence intervals, the complete variance–covariance matrix, standard deviation correlation matrix. A public domain, natural dataset is used to illustrate the performance of the program. A promising result is that, for any distance, the median of the bootstrap distribution for the empirical semivariogram approximates more closely the underlying semivariogram than the estimate derived from the empirical sample.

Computers & Geosciences↗

USGS2017

A software tool to assess uncertainty in transient-storage model parameters using Monte Carlo simulations

Researchers and practitioners alike often need to understand and characterize how water and solutes move through a stream in terms of the relative importance of in-stream and near-stream storage and transport processes. In-channel and subsurface storage processes are highly variable in space and time and difficult to measure. Storage estimates are commonly obtained using transient-storage models (TSMs) of the experimentally obtained solute-tracer test data. The TSM equations represent key transport and storage processes with a suite of numerical parameters. Parameter values are estimated via inverse modeling, in which parameter values are iteratively changed until model simulations closely match observed solute-tracer data. Several investigators have shown that TSM parameter estimates can be highly uncertain. When this is the case, parameter values cannot be used reliably to interpret stream-reach functioning. However, authors of most TSM studies do not evaluate or report parameter certainty. Here, we present a software tool linked to the One-dimensional Transport with Inflow and Storage (OTIS) model that enables researchers to conduct uncertainty analyses via Monte-Carlo parameter sampling and to visualize uncertainty and sensitivity results. We demonstrate application of our tool to 2 case studies and compare our results to output obtained from more traditional implementation of the OTIS model. We conclude by suggesting best practices for transient-storage modeling and recommend that future applications of TSMs include assessments of parameter certainty to support comparisons and more reliable interpretations of transport processes.

Freshwater Science↗

USGS2020

Effects of experimental warming and nutrient enrichment on wetland communities at the Arctic’s edge

Global warming-related changes to freshwater ecosystems in Arctic and Subarctic regions have been magnified by nutrient input from increasing waterfowl populations. To gain insight into how these changes might affect ecosystem function, we conducted a mesocosm experiment in the Subarctic by enriching N and P (1 ×, 10 ×, and 20 × treatments) and increasing mean water temperatures ≤ 3°C. We measured responses of two species of larval amphibians, periphyton, and phytoplankton. Wood frog ( Rana sylvatica ) larvae developed quicker (odds ratio [OR] for 1°C increase = 0.903, 95% CI 0.892–0.912) and were more likely to metamorphose (OR 1.076, 95% CI 0.022–14.73) in warmer waters. Boreal chorus frogs ( Pseudacris maculata ) also developed quicker with warmer temperatures (OR 0.880, 95% CI 0.860–0.900), despite a non-significant trend toward reduced survival (OR 0.853, 95% CI 0.696–1.039). Periphyton and phytoplankton concentrations increased with nutrient additions, as did size of wood frog metamorphs. Periphyton and phytoplankton did not vary with temperature, but periphyton was limited by tadpole abundance. Our results highlight the potential for non-linear responses to ecosystem change, with species-specific consumer and ecosystem responses that depend on the magnitude of changes.

Manitoba↗

USGS2004

Evaluating the source of streamwater nitrate using δ 15 N and δ 18 O in nitrate in two watersheds in New Hampshire, USA

The natural abundance of nitrogen and oxygen isotopes in nitrate can be a powerful tool for identifying the source of nitrate in streamwater in forested watersheds, because the two main sources of nitrate, atmospheric deposition and microbial nitrification, have distinct δ 18 O values. Using a simple mixing model, we estimated the relative fractions in streamwater derived from these sources for two forested watersheds with markedly different streamwater nitrate outputs. In this study, we monitored δ 15 N and δ 18 O of nitrate biweekly in atmospheric deposition and in streamwater for 20 months at the Hubbard Brook Experimental Forest, New Hampshire, USA (moderate nitrogen export), and monthly in streamwater at the Bowl Research Natural Area, New Hampshire, USA (high nitrogen export). For rain, δ 18 O values ranged from +47 to +77&permil; (mean: +58&permil;) and δ 15 N from −5 to +1&permil; (mean: −3&permil;); for snow, δ 18 O values ranged from +52 to +75&permil; (mean: +67&permil;) and δ 15 N from −3 to +2&permil; (mean: −1&permil;). Streamwater nitrate, in contrast to deposition, had δ 18 O values between +12 and +33&permil; (mean: +18&permil;) and δ 15 N between −3 and +6&permil; (mean: 0&permil;). Since nitrate produced by nitrification typically has δ 18 O values ranging from −5 to +15&permil;, our field data suggest that most of the nitrate lost from the watersheds in streamflow was nitrified within the catchment. Our results confirm the importance of microbial nitrogen transformations in regulating nitrogen losses from forested ecosystems and suggest that hydrologic storage may be a factor in controlling catchment nitrate losses.

Hydrological Processes↗

USGS2005

Carbon sequestration potential estimates with changes in land use and tillage practice in Ohio, USA

Soil C sequestration through changes in land use and management is one of the important strategies to mitigate the global greenhouse effect. This study was conducted to estimate C sequestration potential of the top 20 cm depth of soil for two scenarios in Ohio, USA: (1) with reforestation of both current cropland and grassland where SOC pools are less than the baseline SOC pool under current forest; (2) with the adoption of NT on all current cropland. Based on Ohio Soil Survey Characterization Database and long-term experimental data of paired conservation tillage (CT) versus no-till (NT), we specified spatial variations of current SOC pools and C sequestration potentials associated with soil taxa within each major land resource area (MLRA). For scenario I, there would be 4.56 Mha of cropland having an average SOC sequestration capacity of 1.55 kg C m −2 and 0.80 Mha of grassland with that of 1.35 kg C m −2 . Of all potential area, 73% are associated with Alfisols and 15% with Mollisols, but the achievable potential could vary significantly with individual MLRAs. Alternately, an average SOC sequestration rate of 62 g C m −2 year −1 was estimated with conversion from CT to NT for cultivated Alfisols, by which a cumulative increase of 71 Tg C resulted from reforestation of cropland could be realized in 25 years. Soils with lower antecedent C contents have higher C sequestration rates. In comparison with the results obtained at the state scale, the estimates of SOC sequestration potentials taxonomically associated with each specific MLRA may be more useful to the formulation of C credit trading programs.

Agriculture, Ecosystems and Environment↗

USGS1986

Effects of body weight and age on the time and pairing of American black ducks

I used captive young and adult American Black Ducks ( Anas rubripes ) during October-February 1984-1985 to test whether body weight and age affected time of pair-bond formation. Eighty ducks were marked individually, and 10 ducks (6 males and 4 females, half of each age class) were assigned to each of 8 experimental pens. Ducks in 4 pens received an ad libitum diet of commercial duck food, and ducks in the other 4 pens received a restricted ration of the same food. During early winter ducks in both groups gained weight, but ducks on the restricted diet gained less than birds on the ad libitum diet; peak winter weight of ducks on the ad libitum diet averaged 22% greater than initial body weight compared with 6.5% for ducks on the restricted diet. In late winter ducks on the restricted diet lost 28.7% of peak winter weight, and ducks on the ad libitum diet lost 19.3%. Weight loss of ducks on the ad libitum diet began before weather conditions became severe and coincided with a reduction in food consumption. This result supports the idea that weight loss of waterfowl in late winter is controlled endogenously. Individuals on the ad libitum diet paired earlier than those on the restricted diet, and pair bonds were stronger. Adults of both sexes paired earlier than young ducks, but differences for females were not significant statistically. Age and energy constraints are factors that can affect intraspecific variation in pairing chronology.

The Auk↗

USGS2013

Regional constraints to biological nitrogen fixation in post-fire forest communities

Biological nitrogen fixation (BNF) is a key ecological process that can restore nitrogen (N) lost in wildfire and shape the pace and pattern of post-fire forest recovery. To date, there is limited information on how climate and soil fertility interact to influence different pathways of BNF in early forest succession. We studied asymbiotic (forest floor and soil) and symbiotic (the shrub Ceanothus integerrimus) BNF rates across six sites in the Klamath National Forest, California, USA. We used combined gradient and experimental phosphorus (P) fertilization studies to explore cross-site variation in BNF rates and then related these rates to abiotic and biotic variables. We estimate that our measured BNF rates 22 years after wildfire (6.1–12.1 kg N·ha -1 ·yr -1 ) are unlikely to fully replace wildfire N losses. We found that asymbiotic BNF is P limited, although this is not the case for symbiotic BNF in Ceanothus. In contrast, Ceanothus BNF is largely driven by competition from other vegetation: in high-productivity sites with high potential evapotranspiration (Et), shrub biomass is suppressed as tree biomass increases. Because shrub biomass governed cross-site variation in Ceanothus BNF, this competitive interaction led to lower BNF in sites with high productivity and Et. Overall, these results suggest that the effects of nutrients play a larger role in driving asymbiotic than symbiotic fixation across our post-fire sites. However, because symbiotic BNF is 8–90 x greater than asymbiotic BNF, it is interspecific plant competition that governs overall BNF inputs in these forests.

California↗

USGS2005

Grass buffers for playas in agricultural landscapes: A literature synthesis

We summarize current knowledge about grass buffers for protecting small, isolated wetlands in agricultural contexts, including information relevant to protecting playas from runoff containing sediments, nutrients, pesticides, and other contaminants, and information on how buffers may affect densities and productivity of grassland birds. Land-uses surrounding the approximately 60,000 playas within the Playa Lakes Region (PLR), including intensive agriculture, feedlots, and oil extraction, can contribute to severe degradation of playas. Farming and grazing can lead to significant sedimentation in nearby playas, eliminating their ability to hold water, support the region’s biodiversity, or adequately recharge aquifers. Contaminants further degrade habitats and threaten the water quality of underlying aquifers, including the Ogallala Aquifer. Grass buffers hold promise as a management tool to reduce the amount of sediments and contaminants from agricultural runoff that enters playas. Effective buffer width is determined by acceptable sediment-reduction levels, potential water flow and velocity, landscape and soil variables, buffer species, and vegetation structure. Various models have been developed to predict buffer effectiveness; however, most of these models, including those provided by the Natural Resource Conservation Service (NRCS), remain unvalidated. The majority of buffer-effectiveness literature is based on simulated conditions in experimental trays or plots; no published studies of buffer design or effectiveness specifically address playas. Nonetheless, some general patterns have emerged regarding buffer design/effectiveness. Buffers 10–60 m wide are generally considered adequate for trapping most sediments, although in some cases buffers need to be >200 m. The U.S. Fish and Wildlife Service Partners for Wildlife Program in the Southern High Plains recommend a buffer width of ~33 m planted with a diverse mix of native shortgrasses and mixed grasses as a starting point. Most dissolved contaminants, however, are removed from runoff only when they infiltrate the soil, where microbes or other processes can break down or sequester contaminants. Promoting runoff infiltration requires wider buffers with denser stem densities than those required for filtering sediments, which may result in hydrological changes in playas. Ultimately, the balance between runoff and infiltration determines whether or not water eventually reaches a given basin. Long-term buffer effectiveness requires regular maintenance, including excavation to remove overburdens of sediments, repairing vegetation damage, and removing over-mature vegetation or invasions of noxious weeds. Buffers may not be enough to protect playas; best management practices (BMPs; e.g., conservation tillage, contour tilling, and mulching herbicides into soil after application) that diminish soil erosion and contaminant runoff also may be necessary. Nutrient loads in runoff can be minimized by balancing nutrient input with nutrient requirements for livestock and crops. Pesticide application practices also require careful evaluation. Mowing or grazing rather than use of herbicides offer alternatives for suppressing invasive or undesirable plant species in buffers. Future research should entail multiple-scale approaches at regional, wetland-complex, and individual watershed scales. Information needs include direct measures of buffer effectiveness in ‘real-world’ systems, refinement and field tests of buffer-effectiveness models, how buffers may affect floral and faunal communities of playas, and basic ecological information on playa function and playa wildlife ecology. Understanding how wildlife communities respond to patch size and habitat fragmentation is crucial for addressing questions regarding habitat quality of grass buffers in playa systems.

Open-File Report↗

USGS2008

Survival and migration behavior of juvenile coho salmon in the Klamath River relative to discharge at Iron Gate Dam, Northern California, 2007

This report describes a study of survival and migration behavior of juvenile coho salmon in the Klamath River relative to discharge at Iron Gate Dam in 2006. This was the second year of a multi-year study with the goal of determining the effects of discharge at Iron Gate Dam on survival of juvenile coho salmon downstream. The study was a collaborative effort among U.S. Geological Survey (USGS), U.S. Fish and Wildlife Service (USFWS), and the Yurok and Karuk Tribal Fisheries Departments. The goals of the study included: 1) estimating the survival of wild and hatchery juvenile coho salmon in the Klamath River downstream from Iron Gate Dam, 2) determining the effects of discharge and other covariates on their survival and migration, and 3) determining if fish from Iron Gate Hatchery could be used as surrogates for the limited source of wild fish. The major findings of the study in 2006 include: River discharges during the 2006 study period (4 April through 21 July 2006) were among the greatest on record. Average daily discharge at Iron Gate Dam was 3,956 cubic feet per second (cfs) and ranged from 997 to 10,300 cfs. Discharge at Iron Gate Dam was positively correlated with discharges of tributaries downstream due to the above average water year and frequent occurrence of spill at Iron Gate Dam. Average daily discharge near the estuary was 25,789 cfs and ranged from 4,740 to 50,600 cfs. This study was based on hatchery fish taken directly from a tank at Iron Gate Hatchery and wild fish captured in a rotary trap on the Shasta River. Releases of both groups began on 4 April when the catch of wild fish in California Department of Fish and Game‟s Shasta River rotary trap increased, but trap catches varied throughout the study period, resulting in differences in release dates of hatchery and wild fish. A total of 211 hatchery fish were released from 4 April through 26 May. Wild and hatchery fish released on a regular schedule between 25 April and 16 May 2006 were used in comparisons of the survival and migration of hatchery (N = 120) and wild (N = 162) fish. Additional analyses were performed using hatchery fish from all dates. The data and models did not support clear differences between survivals of hatchery and wild fish released on common dates, so estimates of reach survivals were made after pooling these data. Estimates of survival were lowest in the Iron Gate Dam to Scott River reach (0.813) and greatest in the Salmon River to Trinity River reach (1.000). The overall survival from river kilometer 309 (Iron Gate Hatchery) to river kilometer 33 was 0.653 (95% CI 0.578 to 0.729). Estimates of survival based on all hatchery fish releases were similar to those from release dates common to hatchery and wild fish and are similar to those in other river systems over similar distances. The migrations of hatchery and wild fish were different in the uppermost sections of the study area and were similar thereafter. A lag between release and migration, primarily upstream from the Scott River (river kilometer 234), was present in hatchery fish to a greater extent than in wild fish, resulting in differences in migration rates. Fish from both origins spent more time between release and the Scott River than in individual reaches downstream, and this was the only reach in which travel times of fish increased as discharge decreased. The travel times of hatchery and wild fish between sites were statistically similar downstream from Indian Creek (river kilometer 178). There were differences and similarities in the analyses of the effects of covariates on survivals of hatchery and wild fish. The models of covariate effects based on hatchery and wild fish released on common dates indicated effects on wild fish survival that were not supported in data from hatchery fish. However, when the entire suite of hatchery fish releases were used the results of the analyses were similar to those based on wild fish. In both instances the effects of temperature and release date were primarily in the first reach, the reach fish of both origins spent most of their time within. The signs of the effects of these covariates differed among the fish origins (negative for wild and positive for hatchery fish), presumably due to differences in their migrations in the first reach. The effects of dam discharge on survivals of hatchery and wild fish were generally similar (positive relation), and the effects on hatchery, and to a lesser extent wild, fish were largely downstream from the Scott River. This is likely due to the prolonged residence of the naïve hatchery fish, and to a lesser extent, migrant wild fish between release and the Scott River. Inasmuch as the differences between hatchery and wild fish we observed were likely those of migrants vs. non-migrants, the use of hatchery fish captured as they are migrating downstream, rather than those directly from hatchery tanks (i.e., naïve), may improve similarities between hatchery and wild fish in future studies. The data and models used in 2006 do not support the use of naïve hatchery fish as surrogates for migrant wild fish in determining the effects of discharge on survival upstream from the Scott River. This conclusion is based on the different effects of covariates in this reach that were likely attributable to the differences in hatchery and wild migration behaviors in this reach. The results of this second year of research provide insight to the migration and survival of hatchery and wild juvenile coho salmon in the Klamath River, but the results are from a single unusual water year. The results may be different during other water year types. The current information supports a positive relation between discharge at Iron Gate Dam and survival of juvenile coho salmon downstream, but additional data should be used to refine this relation. Discharge at the dam was correlated with discharges of Klamath River tributaries during this above average water year. The data and models from the 2006 study provide the first estimates of survival of these fish in the Klamath River and can be used with data from years with other water year types to examine the effects of discharge on survival. This will only be possible over a period of years in which the correlations between discharge and other factors, such as water temperature and date, are diminished. An experimental approach in which discharges are varied at Iron Gate Dam is the most direct method to determine if survivals are affected by discharge, but this may not be feasible given the limited storage capacity of the project.

California↗

USGS1986

The evolution of young silicic lavas at Medicine Lake Volcano, California: Implications for the origin of compositional gaps in calc-alkaline series lavas

At Medicine Lake Volcano, California, the compositional gap between andesite (57-62 wt.% SiO2) and rhyolite (73-74 wt.% SiO2) has been generated by fractional crystallization. Assimilation of silicic crust has also occurred along with fractionation. Two varieties of inclusions found in Holocene rhyolite flows, hornblende gabbros and aphyric andesites, provide information on the crystallization path followed by lavas parental to the rhyolite. The hornblende gabbros are magmatic cumulate residues and their mineral assemblages are preserved evidence of the phases that crystallized from an andesitic precursor lava to generate the rhyolite lavas. The andesitic inclusions represent samples of a parental andesite and record the early part of the differentiation history. Olivine, plagioclase and augite crystallization begins the differentiation history, followed by the disappearance of olivine and augite through reaction with the liquid to form orthopyroxene and amphibole. Further crystallization of the assemblage plagioclase, amphibole, orthopyroxene, magnetite, and apatite from a high-SiO2 andesite leads to rhyolite. This final crystallization process occurs on a cotectic that is nearly horizontal in temperature-composition space. Since a large amount of crystallization occurs over a limited temperature interval, a compositional gap develops between rhyolite and high SiO2 andesite. Liquidus surfaces with shallow slopes in temperature-composition space are characteristic of several late-stage crystallization assemblages in the andesite to rhyolite compositional range. Experimentally produced plagioclase+ amphibole+orthopyroxene+magnetite and plagioclase+ augite+low-Ca pyroxene+magnetite cotectics have liquidus slopes that are nearly flat. At other calc-alkaline volcanic centers crystallization processes involving large compositional changes over small temperature intervals may also be important in the development of bimodal volcanism (i.e. the existence of a composition gap). At Mt. Mazama and Mt. St. Helens, USA and Aso Caldera and Shikotsu, Japan the amphibole-bearing assemblage was important. At Krakatau, Indonesia and Katmai, USA, an augite+orthopyroxene-bearing assemblage was important. In addition to its role in the production of a compositional gap between intermediate and rhyolitic lavas, the crystallization process increases the H2O content of the residual liquid. This rapid increase in residual liquid volatile content which results from the precipitation of a large proportion of crystalline solids may be an important factor among several that lead to explosive silicic eruptions. ?? 1986 Springer-Verlag.

Contributions to Mineralogy and Petrology↗

USGS2010

The chemistry of iron, aluminum, and dissolved organic material in three acidic, metal-enriched, mountain streams, as controlled by watershed and in-stream processes

Several studies were conducted in three acidic, metal-enriched, mountain streams, and the results are discussed together in this paper to provide a synthesis of watershed and in-stream processes controlling Fe, Al, and DOC (dissolved organic carbon) concentrations. One of the streams, the Snake River, is naturally acidic; the other two, Peru Creek and St. Kevin Gulch, receive acid mine drainage. Analysis of stream water chemistry data for the acidic headwaters of the Snake River shows that some trace metal solutes (Al, Mn, Zn) are correlated with major ions, indicating that watershed processes control their concentrations. Once in the stream, biogeochemical processes can control transport if they occur over time scales comparable to those for hydrologic transport. Examples of the following in-stream reactions are presented: (1) photoreduction and dissolution of hydrous iron oxides in response to an experimental decrease in stream p H, (2) precipitation of Al at three stream confluences, and (3) sorption of dissolved organic material by hydrous iron and aluminum oxides in a stream confluence. The extent of these reactions is evaluated using conservative tracers and a transport model that includes storage in the substream zone.

Water Resources Research↗

USGS2024

A biodynamic model predicting copper and cadmium bioaccumulation in caddisflies: Linkages between field studies and laboratory exposures

Hydropsyche and Arctopsyche are filter-feeding caddisflies (Order: Trichoptera; Family: Hydropsychidae) that are commonly used to monitor metal exposures in rivers. While tissue residue concentrations provide important bioaccumulation data regarding metal bioavailability, they do not provide information regarding the mechanisms of uptake and loss, or exposure history. This study examined the physiological processes that control Cu and Cd uptake and loss using a biokinetic bioaccumulation model. Larvae of each taxon were experimentally exposed to either water or food enriched with stable isotopes ( 65 Cu and 106 Cd). Dissolved Cu uptake (k u ) was similar between species (2.6–3.4 L -1 g 1 d -1 ), but Cd uptake was 3-fold higher in Hydropsyche than Arctopsyche (1.85 L -1 g 1 d -1 and 0.60 L -1 g 1 d -1 , respectively). Cu and Cd efflux rates (k e ) were relatively fast (0.14 d -1 –0.24 d -1 ) in both species, and may explain, in part, their metal tolerance to mine-impacted rivers. Food ingestion rates (IR), assimilation efficiency (AE) of 65 Cu and 106 Cd from laboratory diets were also derived and used in a biodynamic model to quantify the relative contribution of dissolved and dietary exposure routes. Results from the biodynamic model were compared to tissue concentrations observed in a long-term field study and indicated that because dissolved Cu and Cd exposures accounted for less than 20% of body concentrations of either taxon, dietary exposure was the predominant metal pathway. An estimation of exposure history was determined using the model to predict steady state concentrations. Under constant exposure conditions (dissolved plus diet), steady state concentrations were reached in less than 30 days, an outcome largely influenced by rapid efflux (k e ).

PLoSOne↗

USGS1987

NEW APPLICATIONS IN THE INVERSION OF ACOUSTIC FULL WAVEFORM LOGS - RELATING MODE EXCITATION TO LITHOLOGY.

Existing techniques for the quantitative interpretation of waveform data have been based on one of two fundamental approaches: (1) simultaneous identification of compressional and shear velocities; and (2) least-squares minimization of the difference between experimental waveforms and synthetic seismograms. Techniques based on the first approach do not always work, and those based on the second seem too numerically cumbersome for routine application during data processing. An alternative approach is tested here, in which synthetic waveforms are used to predict relative mode excitation in the composite waveform. Synthetic waveforms are generated for a series of lithologies ranging from hard, crystalline rocks (Vp equals 6. 0 km/sec. and Poisson's ratio equals 0. 20) to soft, argillaceous sediments (Vp equals 1. 8 km/sec. and Poisson's ratio equals 0. 40). The series of waveforms illustrates a continuous change within this range of rock properties. Mode energy within characteristic velocity windows is computed for each of the modes in the set of synthetic waveforms. The results indicate that there is a consistent variation in mode excitation in lithology space that can be used to construct a unique relationship between relative mode excitation and lithology.

Log Analyst↗

USGS1998

Effects of wet- and dry-season fires on Jacquemontia curtisii, a south Florida pine forest endemic

South Florida pine forests have a diverse endemic flora that has evolved under the influence of recurrent fire. We studied the response of Jacquemontia curtisii Peter ex Hallier f. (pineland clustervine), a perennial herbaceous member of that flora, to experimental fires during wet and dry seasons. In each of three populations, three treatments were applied: wet-season (June) prescribed fire, dry-season (January) prescribed fire, and an unburned control. Flowering, fruiting, and seedling establishment were followed for up to one year. Mortality of adult plants was twice as great after wet-season burns than after dry-season burns even though fire temperatures were higher in the dry-season burns. Within a season of burning, mortality was greater for the more severely burned plants or the smaller plants. Wet-season burns produced over three times more flowers than not burning, in spite of mortality of more than half the plants. Burning stimulated germination from the soil seed bank. Dry-season burns resulted in five times more seedlings than wet-season burns and more of these seedlings were alive one year after the burn. It is likely that the long-term viability of Jacquemontia curtisii populations is favored by diversity in fire season and severity.

Florida↗

USGS2012

Do predators control prey species abundance? An experimental test with brown treesnakes on Guam

The effect of predators on the abundance of prey species is a topic of ongoing debate in ecology; the effect of snake predators on their prey has been less debated, as there exists a general consensus that snakes do not negatively influence the abundance of their prey. However, this viewpoint has not been adequately tested. We quantified the effect of brown treesnake ( Boiga irregularis ) predation on the abundance and size of lizards on Guam by contrasting lizards in two 1-ha treatment plots of secondary forest from which snakes had been removed and excluded vs. two 1-ha control plots in which snakes were monitored but not removed or excluded. We removed resident snakes from the treatment plots with snake traps and hand capture, and snake immigration into these plots was precluded by electrified snake barriers. Lizards were sampled in all plots quarterly for a year following snake elimination in the treatment plots. Following the completion of this experiment, we used total removal sampling to census lizards on a 100-m 2 subsample of each plot. Results of systematic lizard population monitoring before and after snake removal suggest that the abundance of the skink, Carlia ailanpalai, increased substantially and the abundance of two species of gekkonids, Lepidodactylus lugubris and Hemidactylus frenatus , also increased on snake-free plots. No treatment effect was observed for the skink Emoia caeruleocauda . Mean snout–vent length of all lizard species only increased following snake removal in the treatment plots. The general increase in prey density and mean size was unexpected in light of the literature consensus that snakes do not control the abundance of their prey species. Our findings show that, at least where alternate predators are lacking, snakes may indeed affect prey populations.

Ecology↗