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At least 127 records · Page 7Linked to original sources
USGS2020

A hybrid approach for predictive soil property mapping using conventional soil survey data

Soil property maps are important for land management and earth systems modeling. A new hybrid point-disaggregation predictive soil property mapping strategy improved mapping in the Colorado River Basin, and can be applied to other areas with similar data (e.g. conterminous United States). This new approach increased sample size ~6-fold over past efforts. Random forests related environmental raster layers representing soil forming factors to samples to predict 15 soil properties (pH, texture fractions, rock, electrical conductivity, gypsum, CaCO3, sodium adsorption ratio, available water capacity, bulk density, erodibility, organic matter) at 7 depths, depth to restrictive layer, and surface rock size and cover. Cross-validations resulted in coefficient of determinations averaging 0.52, with a range of 0.20 to 0.76; and mean absolute errors ranged from 3% to 98% of training data averages with a mean of 41%. Uncertainty estimates were also developed by creating relative prediction intervals (RPIs) for the entire study area, which allow end users to evaluate uncertainty relative to original data distributions. Average error increased with higher RPI values (higher uncertainty), and areas with the highest RPI are consistently under-sampled, suggesting that additional sampling in these areas may improve prediction accuracy. Greater uncertainty was also observed in areas with shale parent materials and physiographic settings uncommon relative to the broader study area.

New Mexico, Colorado, Wyoming, Utah, Nevada, Arizo↗
USGS2017

Soil microbial community composition is correlated to soil carbon processing along a boreal wetland formation gradient

Climate change is modifying global biogeochemical cycles. Microbial communities play an integral role in soil biogeochemical cycles; knowledge about microbial composition helps provide a mechanistic understanding of these ecosystem-level phenomena. Next generation sequencing approaches were used to investigate changes in microbial functional groups during ecosystem development, in response to climate change, in northern boreal wetlands. A gradient of wetlands that developed following permafrost degradation was used to characterize changes in the soil microbial communities that mediate C cycling: a bog representing an “undisturbed” system with intact permafrost, and a younger bog and an older bog that formed following the disturbance of permafrost thaw. Reference 16S rRNA databases and several diversity indices were used to assess structural differences among these communities, to assess relationships between soil microbial community composition and various environmental variables including redox potential and pH. Rates of potential CO2 and CH4 gas production were quantified to correlate sequence data with gas flux. The abundance of organic C degraders was highest in the youngest bog, suggesting higher rates of microbial processes, including potential CH4 production. In addition, alpha diversity was also highest in the youngest bog, which seemed to be related to a more neutral pH and a lower redox potential. These results could potentially be driven by increased niche differentiation in anaerobic soils. These results suggest that ecosystem structure, which was largely driven by changes in edaphic and plant community characteristics between the “undisturbed” permafrost bog and the two bogs formed following permafrost thaw, strongly influenced microbial function.

European Journal of Soil Biology↗
USGS1997

Disturbance of biological soil crusts: Impacts on potential wind erodibility of sandy desert soils in southeastern Utah

Friction threshold velocities (FTVs) were determined for biological soil crusts in different stages of recovery. Particles on the surface of crusts that had been relatively undisturbed for at least 20 years were found to have significantly higher FTVs than those that had been disturbed 5, 10 or 1 years previously (376, 87, and 46 cm sec -1 , respectively). FTV's for crust breakage was also much higher for undisturbed crusts when compared to the previously disturbed crusts (573, 148, and 88 cm sec -1 , respectively). All crusted surfaces were more stable than bare sand, which had an FTV of 16 cm sec -1 . Disturbance treatments were then applied to the three crustal classes. Disturbance significantly reduced the FTVs of all classes by 73±92 per cent. Comparing crustal FTVs with mean and high monthly wind speeds found in this region, it was observed that only crusts that had been undisturbed for approximately 20 years or more were able to protect soil surfaces from wind gusts expected on the average of once a month. Other crustal classes, as well as all disturbance treatments, had FTVs lower or equal to that of commonly occurring winds in this region. Because most of the crustal biomass occurs in the top 0-3 mm of soils, even slight soil loss can negatively influence stability and nutrient inputs to this ecosystem.

Utah↗
USGS2011

Simultaneous speciation of arsenic, selenium, and chromium: species, stability, sample preservation, and analysis of ash and soil leachates

An analytical method using high-performance liquid chromatography separation with inductively coupled plasma mass spectrometry (ICP-MS) detection previously developed for the determination of Cr(III) and Cr(VI) has been adapted to allow the determination of As(III), As(V), Se(IV), Se(VI), Cr(III), and Cr(VI) under the same chromatographic conditions. Using this method, all six inorganic species can be determined in less than 3 min. A dynamic reaction cell (DRC)-ICP-MS system was used to detect the species eluted from the chromatographic column in order to reduce interferences. A variety of reaction cell gases and conditions may be utilized with the DRC-ICP-MS, and final selection of conditions is determined by data quality objectives. Results indicated all starting standards, reagents, and sample vials should be thoroughly tested for contamination. Tests on species stability indicated that refrigeration at 10° C was preferential to freezing for most species, particularly when all species were present, and that sample solutions and extracts should be analyzed as soon as possible to eliminate species instability and interconversion effects. A variety of environmental and geological samples, including waters and deionized water [leachates] and simulated biological leachates from soils and wildfire ashes have been analyzed using this method. Analytical spikes performed on each sample were used to evaluate data quality. Speciation analyses were conducted on deionized water leachates and simulated lung fluid leachates of ash and soils impacted by wildfires. These results show that, for leachates containing high levels of total Cr, the majority of the chromium was present in the hexavalent Cr(VI) form. In general, total and hexavalent chromium levels for samples taken from burned residential areas were higher than those obtained from non-residential forested areas. Arsenic, when found, was generally in the more oxidized As(V) form. Selenium (IV) and (VI) were present, but typically at low levels.

Analytical and Bioanalytical Chemistry↗
USGS2009

Heavy metal distribution in soils near Palapye, Botswana: An evaluation of the environmental impact of coal mining and combustion on soils in a semi-arid region

Morupule Colliery near Palapye in eastern Botswana is the only coalmine in production in Botswana at present. Its coal is mainly used in the nearby coal-fired Morupule Power Station, which generates approximately 1,000 GWh of electricity per annum. After more than 30 years mining and more than 20 years of combustion, the sedimentation of outlet fly ash from the Morupule Power Station has increased concentrations of Cr, Ni, Zn and As by 13, 2.5, 16 and 5 ppm, respectively, in the fine portion (<53 ??m) of surface soils for approximately 9 km downwind. Elements that have higher concentrations in coal have stronger small-particle association during coal combustion and are less mobile in surface soils, thus showing stronger contaminations in surface soils around the coal-fired plant. Although the degree of contamination of Cr, Ni, Zn and As from coal combustion in the Palapye area at present is low, it is necessary to monitor concentrations of these elements in surface soils routinely in the future. This study also reveals moderate Pb and Zn contaminations in the Palapye area. The former is due to the use of leaded petroleum in motor vehicle traffic and the latter is mainly due to the use of galvanized iron sheets in construction. ?? 2009 Springer Science+Business Media B.V.

Environmental Geochemistry and Health↗
USGS2019

Soil warming effects on tropical forests with highly weathered soils

The tropics are a region encircling the equator, delineated to the north by the Tropic of Cancer (23°26′14.0″N) and to the south by the Tropic of Capricorn (23°26′14.0″S). While we often think of the tropics as consistently warm and wet throughout the year, in reality, the tropics maintain a myriad of climates. Of the 116 Holdridge life zones (a global bioclimatic classification scheme), the tropics contain more life zones than the sum of all the planet's other geographic regions combined ( Holdridge, 1967 ). In addition to high climatic diversity, the tropics support a wide range of parent materials, landforms, geomorphic characteristics, and soil ages, and maintain all 12 soil types of the USDA soil taxonomy system ( Palm et al., 2007 ; Porder et al., 2007 ; Quesada et al., 2010 ; Richter and Babbar, 1991 ; Sanchez, 1977 ; Soil Survey Staff, 2006 ; Townsend et al., 2008 ). Accordingly, there is no single representative tropical ecosystem. Given the diversity of tropical biomes, this chapter will focus specifically on tropical forested ecosystems and their responses to warming because of their global importance, potential sensitivity to change, and the fact that an improved understanding of how these ecosystems may respond to warmer climate conditions is of significant importance to ecology and society. Furthermore, while generally considering all tropical forest types, emphasis in this chapter is on the humid tropics for which we have most data.

Book chapter↗
USGS2009

Mineralogy of soils from two continental-scale transects across the United States and Canada and its relation to soil geochemistry and climate

Quantitative mineralogy correlates with major-, minor- and trace-element chemistry for 387 samples of A-horizon and deeper soils collected from east-west and north-south transects across the USA and Canada, where the deeper soils were collected beneath the A-horizon samples. Concentrations of the major elements correlate with specific mineral phases. Minor- and trace-element concentrations correlate with the same phases as the major elements with which they share similar geochemical behavior. Concentrations of quartz and feldspar correlate with precipitation trends east of the Rocky Mountains, and are independent of the underlying rock type and age, indicating that the weathering of soils in this region may have reached a steady-state mineralogy. Other trends in mineralogy relate to physiographic province. The combination of quantitative mineralogy and chemical analysis yields a much richer portrait of soils than can be gained from chemistry alone, because the origins of chemical trends and the chemical availability of specific elements are related to mineralogy.

Applied Geochemistry↗
USGS2019

Relative prediction intervals reveal larger uncertainty in 3D approaches to predictive digital soil mapping of soil properties with legacy data

Fine scale maps of soil properties enable efficient land management and inform earth system models. Recent efforts to create soil property maps from field observations tend to use similar tree-based machine learning interpolation approaches, but often deal with depth of predictions, validation, and uncertainty differently. One of the main differences in approaches is whether to model individual depths of interest separately as ‘2D’ models, or to create models that incorporate depth as a predictor variable creating a ‘3D’ model that can make pre-dictions for all depths. It is unclear how choice of 2D or 3D approach influences model accuracy and uncertainty due to lack of direct comparison and inconsistent presentation of results in past studies. This study compares 2D and 3D methods for mapping soil electrical conductivity (salinity), pH, sum of fine and very fine sands, and organic carbon at 30 m resolution for the upper 432,000 km 2 of the Colorado River Watershed of the United States of America. A new, simple, model-agnostic relative prediction interval (RPI) approach to report un-certainty is presented that scales prediction interval width to the 95% interquantile width of the original training sample distribution. The RPI approach enables direct comparison of uncertainty between properties and depths and is easily interpretable by end users. Results indicate that 3D mapping of soil properties with strong variation with depth can result in substantial areas with much higher uncertainty that coincide with unrealistic predictions relative to 2D models, even though 3D models had slightly better global cross-validation scores. Maps and global model summaries of RPI proved helpful in identifying these issues with 3D models. These results suggest that the use of RPI or similar approaches to evaluate models can identify accuracy problems not evident in global va-lidation diagnostics.

Geoderma↗
USGS2020

Inoculation and habitat amelioration efforts in biological soil crust recovery vary by desert and soil texture

As dryland degradation continues, it is increasingly important to understand how to effectively restore biocrust communities. Potential techniques include the addition of biocrust inoculum to accelerate biocrust recovery. Enhanced erosion typical of degraded environments creates a challenge for these approaches, due to loss by wind or water and burial by saltating particles. To retain and protect added inoculum, the inclusion of habitat‐amelioration techniques can improve recovery rates. This study tested three different types of inoculum (field‐collected, greenhouse‐cultivated, and laboratory‐cultivated biocrust) coupled with two treatments to augment soil stability and ameliorate habitat limitations: soil surface polyacrylamide additions and installation of straw barriers. This was done across two deserts (Great Basin and Chihuahuan) and separated into generally coarse‐ or finer‐textured soils in each desert, with results monitored for 3 years (2015, 2016, 2017). While the inoculum type, coupled with habitat ameliorations, occasionally enhanced biocrust growth across years and treatments, in other cases, it made no difference compared to natural recovery rates. Rather, the desert location and soil texture groupings were the most prominent factors in determining recovery trajectories. Recovery proportions were similar in the finer‐textured sites in both the Great Basin and the Chihuahuan deserts, while the coarser‐textured site in the Great Basin did show some recovery over time and the Chihuahuan coarser‐textured site did not. This study demonstrates the importance of understanding site potential and identifying key limitations to biocrust recovery for successful restoration projects.

New Mexico, Texas↗
USGS2004

Soil data from Picea mariana stands near delta junction, Alaska of different ages and soil drainage type

The U.S. Geological Survey project Fate of Carbon in Alaskan Landscapes (FOCAL) is studying the effect of fire and soil drainage on soil carbon storage in the boreal forest. This project has selected several sites to study within central Alaska of varying ages (time since fire) and soil drainage types. This report describes the location of these sampling sites, as well as the procedures used to describe, sample, and analyze the soils. This report also contains data tables with this information, including, but not limited to field descriptions, bulk density, particle size distribution, moisture content, carbon (C) concentration, nitrogen (N) concentration, isotopic data for C, and major, minor and trace elemental concentration.

Open-File Report↗
USGS2008

Regional Geochemical Results from Analyses of Stream-Water, Stream-Sediment, Soil, Soil-Water, Bedrock, and Vegetation Samples, Tangle Lakes District, Alaska

We report chemical analyses of stream-water, stream-sediment, soil, soil-water, bedrock, and vegetation samples collected from the headwaters of the Delta River (Tangle Lakes District, Mount Hayes 1:250,000-scale quadrangle) in east-central Alaska for the period June 20-25, 2006. Additionally, we present mineralogic analyses of stream sediment, concentrated by panning. The study area includes the southwestward extent of the Bureau of Land Management (BLM) Delta River Mining District (Bittenbender and others, 2007), including parts of the Delta River Archeological District, and encompasses an area of about 500 km2(approximately bordered by the Denali Highway to the south, near Round Tangle Lake, northward to the foothills of the Alaska Range (fig. 1). The primary focus of this study was the chemical characterization of native materials, especially surface-water and sediment samples, of first-order streams from the headwaters of the Delta River. The impetus for this work was the need, expressed by the Alaska Department of Natural Resources (ADNR), for an inventory of geochemical and hydrogeochemical baseline information about the Delta River Mining District. This information is needed because of a major upturn in exploration, drilling, and general mineral-resources assessments in the region since the late 1990s. Currently, the study area, called the 'MAN Project' area is being explored by Pure Nickel, Inc. (http://www.purenickel.com/s/MAN_Alaska.asp), and includes both Cu-Au-Ag and Ni-Cu-PGE (Pt-Pd-Au-Ag) mining claims. Geochemical data on surface-water, stream-sediment, soil, soil-water, grayleaf willow (Salix glauca L.), and limited bedrock samples are provided along with the analytical methodologies used and panned-concentrate mineralogy. We are releasing the data at this time with only minimal interpretation.

Open-File Report↗
USGS2023

Cultivating resilience in dryland soils: An assisted migration approach to biological soil crust restoration

Land use practices and climate change have driven substantial soil degradation across global drylands, impacting ecosystem functions and human livelihoods. Biological soil crusts, a common feature of dryland ecosystems, are under extensive exploration for their potential to restore the stability and fertility of degraded soils through the development of inoculants. However, stressful abiotic conditions often result in the failure of inoculation-based restoration in the field and may hinder the long-term success of biocrust restoration efforts. Taking an assisted migration approach, we cultivated biocrust inocula sourced from multiple hot-adapted sites (Mojave and Sonoran Deserts) in an outdoor facility at a cool desert site (Colorado Plateau). In addition to cultivating inoculum from each site, we created an inoculum mixture of biocrust from the Mojave Desert, Sonoran Desert, and Colorado Plateau. We then applied two habitat amelioration treatments to the cultivation site (growth substrate and shading) to enhance soil stability and water availability and reduce UV stress. Using marker gene sequencing, we found that the cultivated mixed inoculum comprised both local- and hot-adapted cyanobacteria at the end of cultivation but had similar cyanobacterial richness as each unmixed inoculum. All cultivated inocula had more cyanobacterial 16S rRNA gene copies and higher cyanobacterial richness when cultivated with a growth substrate and shade. Our work shows that it is possible to field cultivate biocrust inocula sourced from different deserts, but that community composition shifts toward that of the cultivation site unless habitat amelioration is employed. Future assessments of the function of a mixed inoculum in restoration and its resilience in the face of abiotic stressors are needed to determine the relative benefit of assisted migration compared to the challenges and risks of this approach.

Arizona, California, Utah↗
USGS2008

A soil burn severity index for understanding soil-fire relations in tropical forests

Methods for evaluating the impact of fires within tropical forests are needed as fires become more frequent and human populations and demands on forests increase. Short- and long-term fire effects on soils are determined by the prefire, fire, and postfire environments. We placed these components within a fire-disturbance continuum to guide our literature synthesis and develop an integrated soil burn severity index. The soil burn severity index provides a set of indicators that reflect the range of conditions present after a fire. The index consists of seven levels, an unburned level and six other levels that describe a range of postfire soil conditions. We view this index as a tool for understanding the effects of fires on the forest floor, with the realization that as new information is gained, the index may be modified as warranted. ?? Royal Swedish Academy of Sciences 2008.

Conference Paper↗
USGS2016

Low soil moisture during hot periods drives apparent negative temperature sensitivity of soil respiration in a dryland ecosystem: A multi-model comparison

Arid and semiarid ecosystems (drylands) may dominate the trajectory of biosphere-to-atmosphere carbon (C) exchange, and understanding dryland CO 2 efflux is important for C cycling at the global-scale. However, unknowns remain regarding how temperature and moisture interact to regulate dryland soil respiration ( R s ), while ‘islands of fertility’ in drylands create spatially heterogeneous R s . At a site in southeastern Utah, USA we added or removed litter (0–650 % of control) in plots associated with either shrubs or biological soil crust-dominated interspaces between vascular plants. We measured R s , soil temperature (T s ), and water content (θ) repeatedly from October 2013 to November 2014. R s was highest following rain in late summer at T s ~30 °C, and lowest mid-summer at T s > 40 °C, resulting in apparent negative temperature sensitivity of R s at high temperatures, and positive temperature sensitivity at low-moderate temperatures. We used Bayesian statistical methods to compare models capturing a range of hypothesized relationships between T s , θ, and R s . The best model indicates that apparent negative temperature sensitivity of R s at high T s reflects the control of water content, not high temperatures. Modeled Q 10 ranged from 2.7 to 1.4 between 5 and 45 °C. Litter addition had no effect on Q 10 or reference respiration ( R ref = R s at 20 °C and optimum θ) beneath shrubs, and little effect on R ref in interspaces, yet R ref was 1.5 times higher beneath shrubs than in interspaces. Altogether, these results suggest reduced R s often observed at high T s in drylands is dominated by the control of θ, and, on shorter-timescales, variable litter inputs exert minimal control over R s .

Biogeochemistry↗
USGS2013

Common and distinguishing features of the bacterial and fungal communities in biological soil crusts and shrub root zone soils

Soil microbial communities in dryland ecosystems play important roles as root associates of the widely spaced plants and as the dominant members of biological soil crusts (biocrusts) colonizing the plant interspaces. We employed rRNA gene sequencing (bacterial 16S/fungal large subunit) and shotgun metagenomic sequencing to compare the microbial communities inhabiting the root zones of the dominant shrub, Larrea tridentata (creosote bush), and the interspace biocrusts in a Mojave desert shrubland within the Nevada Free Air CO 2 Enrichment (FACE) experiment. Most of the numerically abundant bacteria and fungi were present in both the biocrusts and root zones, although the proportional abundance of those members differed significantly between habitats. Biocrust bacteria were predominantly Cyanobacteria while root zones harbored significantly more Actinobacteria and Proteobacteria. Pezizomycetes fungi dominated the biocrusts while Dothideomycetes were highest in root zones. Functional gene abundances in metagenome sequence datasets reflected the taxonomic differences noted in the 16S rRNA datasets. For example, functional categories related to photosynthesis, circadian clock proteins, and heterocyst-associated genes were enriched in the biocrusts, where populations of Cyanobacteria were larger. Genes related to potassium metabolism were also more abundant in the biocrusts, suggesting differences in nutrient cycling between biocrusts and root zones. Finally, ten years of elevated atmospheric CO 2 did not result in large shifts in taxonomic composition of the bacterial or fungal communities or the functional gene inventories in the shotgun metagenomes.

Nevada↗
USGS2016

Soil phosphorus cycling in tropical soils: An ultisol and oxisol perspective

Phosphorus (P) is essential for life. It is the backbone of our DNA, provides energy for biological reactions, and is an integral component of cell membranes. As such, it is no surprise that P availability plays a strong role in regulating ecosystem structure and function (Wassen et al. 2005, Elser et al. 2007, Condit et al. 2013), and in determining our capacity to grow food for a burgeoning human population (Sharpley et al. 1997, Sims and Sharpley 2005, Lal 2009). Concerns that P supplies are insufficient to meet our species’ growing demands are on the rise (Richardson and Simpson 2011) and scientific and media outlets increasingly discuss P as an element worthy of our attention and concern (e.g., Cordell et al. 2009, Lougheed 2011, Edixhoven et al. 2013, Ulrich et al. 2013). Indeed, a number of groups are calling for the explicit stewardship of our planet’s P stocks (Schipper 2014, Withers et al. 2015). Yet a focus on P as a vital and limited resource is not new in the tropics, where an abundance of soils characterized by low P has resulted in a substantial, longstanding reliance on P inputs for tropical ecosystem function in both unmanaged and agriculture settings (Table 1, Figure 2; Sanchez 1976, Swap et al. 1992, Chadwick et al. 1999, Okin et al. 2004, Lal 2009). Indeed, there is a long history of cultivation in the tropics, where for thousands of years land management practices have included methods that effectively modify P availability for plant growth (e.g., Giardina et al. 2000, Lawrence and Schlesinger 2001, Vitousek et al. 2004, Lewis et al. 2015). Nevertheless, low soil fertility in tropical systems where fertilizer is scarce has enduringly been recognized as a major source of hunger and starvation (Sanchez and Buol 1975, Sanchez 2002, Sanchez and Swaminathan 2005).

Book chapter↗