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Surficial geology of Shaver Hollow, Shenandoah National Park

At the request of Shenandoah National Park and the Department of Environmental Sciences at the University of Virginia, the US Geological Survey has completed an examination and map of the surficial deposits in Shaver Hollow. The work was carried out as part of the US Geological Survey - National Park Service cooperative agreement implemented in 1994. Shaver Hollow is a small, well defined drainage basin on the west slope of the Blue Ridge about 6.5 miles south of Thornton Gap and can be reached by trail from mile 37.9 on the Skyline Drive. The hollow is drained by the North Fork of Dry Run, and the watershed within the Shenandoah National park is only 2 square miles in area. The area has been the site of extensive investigations by faculty and students at the University of Virginia and by NPS scientists and investigators studying the interaction of atmosphere chemistry, water composition, and the biota of the hollow (Furman and others, written communication, 1997). Modeling of the chemistry of Dry Run surface water, based on atmospheric, biologic, and geologic data, has been attempted with limited success. Better understanding of the surficial deposits and the interaction of streams and springs with near surface materials is needed before more sophisticated models can be devised. Although the bedrock lithology was mapped at a small scale (1:62,000-scale; Gathright, 1976) no examination of the surficial deposits of the hollow was made. The description of deposits contained herein is based on field observations carried out in September - November, 1996. Also included with this report is a 1/12,000-scale map of the surficial geology of Shaver Hollow (figure 1).

Virginia

Response of western mountain ecosystems to climatic variability and change: The Western Mountain Initiative

Mountain ecosystems within our national parks and other protected areas provide valuable goods and services such as clean water, biodiversity conservation, and recreational opportunities, but their potential responses to expected climatic changes are inadequately understood. The Western Mountain Initiative (WMI) is a collaboration of scientists whose research focuses on understanding and predicting responses of western mountain ecosystems to climatic variability and change. It is a legacy of the Global Change Research Program initiated by the National Park Service (NPS) in 1991 and continued by the U.S. Geological Survey (USGS) to this day as part of the U.S. Climate Change Science Program (http://www.climatescience.gov/). All WMI scientists are active participants in CIRMOUNT, and seek to further its goals.

California, Colorado, Montana, New Mexico, Washing

A draft decision framework for the National Park Service Interior Region 5 bison stewardship strategy

The Department of the Interior Bison Conservation Initiative calls for its bureaus to plan and implement collaborative American bison conservation and to ensure involvement by tribal, state, and local governments and the public in that conservation. Four independently managed and geographically separated National Park Service (NPS) units in Interior Region 5 (IR5) preserve bison and other components of a formerly contiguous Great Plains landscape. Management of bison in IR5 parks has historically been specific to each park, and livestock and range management science informed much of the decision making. In the past two decades, NPS has shifted away from managing bison from this livestock-based perspective towards a wildlife stewardship approach, including ensuring their long-term adaptive potential and considering them as just one part of a complex ecosystem. This shift requires a more holistic and cooperative approach to stewardship that is challenging not only because of limitations in funding and fluctuations in leadership priorities, but also because of the constraints imposed by the parks’ relatively small, fenced areas. The IR5 NPS Bison Stewardship Strategy (“Strategy”) will help the NPS to meet its responsibilities in cooperative stewardship of bison. The Strategy will serve to organize and consolidate the NPS’s legal and policy responsibilities within a framework of collectively defined values and objectives to support the careful and transparent decision-making processes that both guide and transcend park-specific planning. This report describes a preliminary decision framework for the Strategy, including the context, the fundamental objectives, and a range of alternative strategies developed and considered through two workshops and a series of conference calls with NPS personnel, stakeholders, and outside experts with an interest in IR5 NPS bison stewardship. Although not the Strategy itself, this framework serves as the Strategy’s starting point and identifies 14 fundamental objectives, falling in four major themes: Persistence of Wild and Healthy Bison 1. Maximize the long-term persistence of bison in IR5 parks 2. Maximize the long-term adaptive capacity of bison in North America 3. Maximize the wildness of the bison herds 4. Maximize humane treatment of bison, while allowing natural processes to occur Supporting Tribal Buffalo Culture 5. Improve relationships, trust, and communication with Tribes to enhance shared stewardship of bison within and beyond IR5 6. Maximize the number of live, healthy bison that can be transferred to tribal herds Persistence of Native Ecological Communities and Processes 7. Maximize structural and compositional heterogeneity of native prairie plant communities across space and time within each park 8. Maximize the abundance and diversity of animal species of special concern 9. Minimize the loss of native grassland within each park 10. Minimize the abundance of exotic plants in the park landscape 11. Maximize riparian area and wetland integrity Public Outreach 12. Maximize the number of healthy, wild bison that are visible to the public 13. Maximize the safety of visitors 14. Maximize public understanding of the past, present, and future of bison and Native Americans in the Great Plains The terms “minimize” and “maximize” in these objectives describe the desired direction for each individual objective. Finding the right balance among these objectives and any others identified in further work is one of the central challenges in developing the Strategy. To that end, this report also demonstrates and describes potential methods for evaluating how well alternative strategies would achieve each of the fundamental objectives.

Natural Resource Report

Digital geologic map data for the Ozark National Scenic Riverways and adjacent areas along the Current River and Jacks Fork, Missouri

The geology of the Ozark National Scenic Riverways (ONSR) in southern Missouri has been mapped at 1:24,000 scale. This endeavor was achieved through the combined efforts of U.S. Geological Survey and Missouri Geological Survey individual quadrangle mapping and additional fieldwork by the authors of this report. Geologic data covering the area of the ONSR and a 1-mile (1.6-kilometer) buffer zone surrounding the park, as well as geologic data from a few key adjoining areas, have been compiled into a single, seamless geographic information system database. The intent is to provide base geologic information for natural science research and land management in the park and surrounding areas. The data are served online at ScienceBase ( https://www.sciencebase.gov/catalog/ ), where they are provided in Environmental Systems Research Institute (ESRI) file geodatabase format, and are accompanied by metadata files. These data can be accessed at: http://dx.doi.org/10.5066/F7CJ8BKB . Additional detailed geologic information about the ONSR and surrounding areas is available in the separate 1:24,000-scale quadrangle maps and in a 1:100,000-scale map and report on the regional geology.

Missouri

EAARL topography - Vicksburg National Military Park 2008: Bare earth

These remotely sensed, geographically referenced elevation measurements of Lidar-derived bare earth (BE) topography were produced as a collaborative effort between the U.S. Geological Survey (USGS), Florida Integrated Science Center (FISC), St. Petersburg, FL; the National Park Service (NPS), Gulf Coast Network, Lafayette, LA; and the National Aeronautics and Space Administration (NASA), Wallops Flight Facility, VA. This project provides highly detailed and accurate datasets of the Vicksburg National Military Park in Mississippi, acquired on March 6, 2008. The datasets are made available for use as a management tool to research scientists and natural resource managers. An innovative airborne Lidar instrument originally developed at the NASA Wallops Flight Facility, and known as the Experimental Advanced Airborne Research Lidar (EAARL), was used during data acquisition. The EAARL system is a raster-scanning, waveform-resolving, green-wavelength (532-nanometer) Lidar designed to map near-shore bathymetry, topography, and vegetation structure simultaneously. The EAARL sensor suite includes the raster-scanning, water-penetrating full-waveform adaptive Lidar, a down-looking red-green-blue (RGB) digital camera, a high-resolution multi-spectral color infrared (CIR) camera, two precision dual-frequency kinematic carrier-phase GPS receivers, and an integrated miniature digital inertial measurement unit, which provide for submeter georeferencing of each laser sample. The nominal EAARL platform is a twin-engine Cessna 310 aircraft, but the instrument may be deployed on a range of light aircraft. A single pilot, a Lidar operator, and a data analyst constitute the crew for most survey operations. This sensor has the potential to make significant contributions in measuring sub-aerial and submarine coastal topography within cross-environmental surveys. Elevation measurements were collected over the survey area using the EAARL system, and the resulting data were then processed using the Airborne Lidar Processing System (ALPS), a custom-built processing system developed in a NASA-USGS collaboration. ALPS supports the exploration and processing of Lidar data in an interactive or batch mode. Modules for presurvey flight line definition, flight path plotting, Lidar raster and waveform investigation, and digital camera image playback have been developed. Processing algorithms have been developed to extract the range to the first and last significant return within each waveform. ALPS is used routinely to create maps that represent submerged or first surface topography. Specialized filtering algorithms have been implemented to determine the 'bare earth' under vegetation from a point cloud of last return elevations.

Mississippi

Coastal circulation and water-column properties in the War in the Pacific National Historical Park, Guam: measurements and modeling of waves, currents, temperature, salinity, and turbidity, April-August 2012

The U.S. Geological Survey (USGS) Pacific Coastal and Marine Science Center (PCMSC) initiated an investigation in the National Park Service’s (NPS) War in the Pacific National Historical Park (WAPA) to provide baseline scientific information on coastal circulation and water-column properties along west-central Guam, focusing on WAPA’s Agat Unit, as it relates to the transport and settlement of coral larvae, fish, and other marine organisms. The oceanographic data and numerical circulation modeling results from this study demonstrate that circulation in Agat Bay was strongly driven by winds and waves at longer (>1 day) timescales and by the tides at shorter (<1 day) timescales; near-surface currents in deep water were primarily controlled by the winds, whereas currents on the shallow reef flats were dominated by wave-driven motions. Water-column properties exhibited strong seasonality coupled to the shift from the trade wind to the non-trade wind season. During the dry trade-wind season, waters were cooler and more saline. When the winds shifted to a more variable pattern, waters warmed and became less saline because of a combination of increased thermal insolation from lack of wind forcing and higher rainfall. Turbidity was relatively low in Agat Bay and was similar to levels measured elsewhere along west-central Guam. The numerical circulation modeling results provide insight into the potential paths of buoyant material released from a series of locations along west-central Guam under summer non-trade wind forcing conditions that characterize coral spawning events. This information may be useful in evaluating the potential zones of influence/impact resulting from transport by surface currents of material released from these select locations.

Agat Bay;War In The Pacific National Historical Pa

EAARL Topography-Vicksburg National Military Park 2007: First Surface

These remotely sensed, geographically referenced elevation measurements of Lidar-derived first-surface (FS) topography were produced as a collaborative effort between the U.S. Geological Survey (USGS), Florida Integrated Science Center (FISC), St. Petersburg, FL; the National Park Service (NPS), Gulf Coast Network, Lafayette, LA; and the National Aeronautics and Space Administration (NASA), Wallops Flight Facility, VA. This project provides highly detailed and accurate datasets of the Vicksburg National Military Park in Mississippi, acquired on September 12, 2007. The datasets are made available for use as a management tool to research scientists and natural resource managers. An innovative airborne Lidar instrument originally developed at the NASA Wallops Flight Facility, and known as the Experimental Advanced Airborne Research Lidar (EAARL), was used during data acquisition. The EAARL system is a raster-scanning, waveform-resolving, green-wavelength (532-nanometer) Lidar designed to map near-shore bathymetry, topography, and vegetation structure simultaneously. The EAARL sensor suite includes the raster-scanning, water-penetrating full-waveform adaptive Lidar, a down-looking red-green-blue (RGB) digital camera, a high-resolution multi-spectral color infrared (CIR) camera, two precision dual-frequency kinematic carrier-phase GPS receivers, and an integrated miniature digital inertial measurement unit, which provide for submeter georeferencing of each laser sample. The nominal EAARL platform is a twin-engine Cessna 310 aircraft, but the instrument may be deployed on a range of light aircraft. A single pilot, a Lidar operator, and a data analyst constitute the crew for most survey operations. This sensor has the potential to make significant contributions in measuring sub-aerial and submarine coastal topography within cross-environmental surveys. Elevation measurements were collected over the survey area using the EAARL system, and the resulting data were then processed using the Airborne Lidar Processing System (ALPS), a custom-built processing system developed in a NASA-USGS collaboration. ALPS supports the exploration and processing of Lidar data in an interactive or batch mode. Modules for presurvey flight line definition, flight path plotting, Lidar raster and waveform investigation, and digital camera image playback have been developed. Processing algorithms have been developed to extract the range to the first and last significant return within each waveform. ALPS is used routinely to create maps that represent submerged or first surface topography. Specialized filtering algorithms have been implemented to determine the 'bare earth' under vegetation from a point cloud of last return elevations.

Data Series

Herpetic keratoconjunctivitis: Therapy with synthetic double-stranded RNA

A study was undertaken in rabbits to determine how late in the course of keratoconjunctivitis caused by herpes simplex recovery could be effected by an inducer of interferon. Interferon was induced by means of synthetic double-stranded RNA copolymer formed with polynosinic acid: polycytidilic acid RNA. Therapy promotes recovery from severe and fully established keratoconjunctivitis for which treatment was begun as late as 3 days after virus inoculation. No drug toxicity was observed in the therapeutic dose range. These findings further support the proposed role of the interferon mechanism in the natural recovery of already established viral infection. They also suggest the usefulness of interferon inducers in viral infections of man.

Science

Yellowstone convenes science information sharing panel on aquatic invasive species

Yellowstone National Park (YNP) supports one of the most significant aquatic ecosystems in the U.S. Headwater streams and rivers emerge from the park and join to become three of America’s most important waterways and ultimately flow into the Pacific and Atlantic oceans: the Yellowstone River, the Missouri River and the Snake River. At the heart of YNP lies Yellowstone Lake – the largest alpine body of water in North America. The park encompasses about 2.25 million acres, five percent of which is covered by water, including more than 220 lakes and 2,650 miles of streams.

Idaho, Montana, Wyoming

National Park Service Vegetation Mapping Inventory Program: Great Smoky Mountains National Park vegetation mapping project

The National Park Service (NPS) Vegetation Mapping Inventory (VMI) Program is an effort to classify, describe, and map existing vegetation communities in national park units throughout the United States. The NPS VMI Program is managed by the NPS Natural Resource Stewardship and Science Inventory and Monitoring Program and provides baseline vegetation information to natural resource managers, researchers, and ecologists. The U.S. Geological Survey Upper Midwest Environmental Sciences Center, NatureServe, and NPS Great Smoky Mountains National Park (GRSM, also referred to as the “Park”) have completed vegetation classification and mapping of GRSM, including the Foothills Parkway, for the NPS VMI Program. Mappers, ecologists, and botanists collaborated to affirm vegetation types of GRSM and to determine how best to map the vegetation types by using aerial imagery. A vegetation classification developed in 2003 by NatureServe and the NPS served as a foundation to further classify and map the vegetation types of the Park. Data from an additional 10 vegetation plots supported vegetation types either rare or not documented in the 2003 classification. Data from 203 verification sites were collected to test the field key to vegetation types and the application of vegetation types to a sample set of map polygons. Furthermore, data from 972 accuracy assessment (AA) sites were collected (of which 966 were used to test accuracy of the vegetation map layer). This GRSM vegetation mapping project identified 112 vegetation types consisting of 105 association types in the U.S. National Vegetation Classification (USNVC), 2 “park-special” types, 1 “map-special” type, and 4 cultural types in the USNVC. To map the vegetation and land cover of GRSM, 52 map classes were developed. Of these 52 map classes, 46 represent natural (including ruderal) vegetation types, most of which types are recognized in the USNVC. For the remaining 6 of the 52 map classes, 4 represent USNVC cultural types for agricultural and developed areas, and 2 represent non-USNVC types for nonvegetated open water and nonvegetated rock. Features were interpreted from viewing four-band digital aerial imagery using digital onscreen three-dimensional stereoscopic workflow systems in geographic information systems; digital aerial imagery was collected during September 23–October 30, 2015. The interpreted data were digitally and spatially referenced, thus making the spatial-database layers usable in a geographic information system. Polygon units were mapped to either a 0.5- or 0.25- hectare (ha) minimum mapping unit, depending on vegetation type. A geodatabase containing several feature-class layers and tables provides the locations and data of USNVC vegetation types (vegetation map layer), vegetation plots, verification sites, AA sites, project boundary extent, and aerial image centers and flight lines. Covering 210,875 ha, the feature-class layer and related tables for the vegetation map layer provide 34,084 polygons of detailed attribute data when special modifiers are not considered (average polygon size of 6.2 ha) and 36,589 polygons of detailed attribute data when special modifiers are considered (average polygon size of 5.8 ha). Each map polygon is assigned a map-class code and name and, when applicable, are linked to USNVC classification tables within the geodatabase. The vegetation map extent includes the administrative boundary for GRSM and the Foothills Parkway. A summary report, generated from the vegetation map layer, concludes that the 46 map classes representing natural (including ruderal) vegetation types apply to 99.2% of polygons (33,797 polygons; average size of 6.2 ha) and cover 98.6% of the Park (207,971.4 ha). Further broken down, map classes representing natural vegetation types indicate that the Park is 97.7% forest and woodland (205,882.5 ha), 0.6% shrubland (1,174.6 ha), and 0.4% herbaceous (914.3 ha). Map classes representing cultural vegetation types apply to 0.8% of polygons (259 polygons; average size of 4.9 ha) and cover 0.6% of the Park (1,277.4 ha). Map classes representing nonvegetation open and flowing water and unvegetated rock apply to 0.08% of polygons (28 polygons; average size of 58.1 ha) and cover 0.8% of the Park (1,625.9 ha). A thematic AA study was completed of map classes representing the natural (including ruderal) vegetation types of the Park. Initial AA results were discussed with NPS staff from the Park. Following input from NPS staff on how to handle map classes that fell below accuracy standards, adjustments were made to the vegetation map layer. Final results indicate an overall accuracy of 80.64% (kappa index of 79.96% for chance agreements) based on data from 966 of the 972 AA sites. Most individual map-class themes exceed the NPS VMI Program standard of 80% with a 90% confidence interval. The GRSM vegetation mapping project delivers many geospatial and vegetation data products, including an in-depth project report discussing methods and results, which includes map classification and map-class descriptions. This suite of products also includes descriptions and a field key to vegetation types; a database of vegetation plots, verification sites, and AA sites; digital images of field sites; field data sheets; digital aerial imagery; hardcopy and digital maps; a geodatabase of vegetation and land cover (map layer), field sites (vegetation plots, verification sites, and AA sites), aerial imagery index, project boundary, and metadata; and a contingency table listing AA results. Geospatial products are projected in the Universal Transverse Mercator, Zone 17 North, by using the North American Datum of 1983. Information on the NPS VMI Program and completed mapping projects are on the internet at https://www.nps.gov/im/vegetation-inventory.htm.

North Carolina, Tennessee

EAARL topography: Jean Lafitte National Historical Park and Preserve 2006

These remotely sensed, geographically referenced elevation measurements of Lidar-derived first surface (FS) and bare earth (BE) topography were produced as a collaborative effort between the U.S. Geological Survey (USGS), Florida Integrated Science Center (FISC), St. Petersburg, FL; the National Park Service (NPS), Gulf Coast Network, Lafayette, LA; and the National Aeronautics and Space Administration (NASA), Wallops Flight Facility, VA. This project provides highly detailed and accurate datasets of the Jean Lafitte National Historical Park and Preserve in Louisiana, acquired on September 22, 2006. The datasets are made available for use as a management tool to research scientists and natural resource managers. An innovative airborne Lidar instrument originally developed at the NASA Wallops Flight Facility, and known as the Experimental Advanced Airborne Research Lidar (EAARL), was used during data acquisition. The EAARL system is a raster-scanning, waveform-resolving, green-wavelength (532-nanometer) Lidar designed to map near-shore bathymetry, topography, and vegetation structure simultaneously. The EAARL sensor suite includes the raster-scanning, water-penetrating full-waveform adaptive Lidar, a down-looking red-green-blue (RGB) digital camera, a high-resolution multi-spectral color infrared (CIR) camera, two precision dual-frequency kinematic carrier-phase GPS receivers, and an integrated miniature digital inertial measurement unit, which provide for submeter georeferencing of each laser sample. The nominal EAARL platform is a twin-engine Cessna 310 aircraft, but the instrument may be deployed on a range of light aircraft. A single pilot, a Lidar operator, and a data analyst constitute the crew for most survey operations. This sensor has the potential to make significant contributions in measuring sub-aerial and submarine coastal topography within cross-environmental surveys. Elevation measurements were collected over the survey area using the EAARL system, and the resulting data were then processed using the Airborne Lidar Processing System (ALPS), a custom-built processing system developed in a NASA-USGS collaboration. ALPS supports the exploration and processing of Lidar data in an interactive or batch mode. Modules for presurvey flight line definition, flight path plotting, Lidar raster and waveform investigation, and digital camera image playback have been developed. Processing algorithms have been developed to extract the range to the first and last significant return within each waveform. ALPS is used routinely to create maps that represent submerged or first surface topography. Specialized filtering algorithms have been implemented to determine the 'bare earth' under vegetation from a point cloud of last return elevations.

Louisiana

Water-Quality Data for Selected National Park Units within the Southern Colorado Plateau Network, Arizona, Utah, Colorado, and New Mexico, Water Years 2005 and 2006

The National Park Service initiated a Level 1 Water-Quality Inventory program to provide water-quality data to park managers so informed natural resource management decisions could be made. Level 1 water-quality data were collected by the U.S. Geological Survey Arizona Water Science Center at 57 sites in 13 National Park units located in the Southern Colorado Plateau Inventory and Monitoring network in water years 2005 and 2006. These data describe the current water-quality at selected sites within the park units and provide information for monitoring future trends. Water samples were collected three times at each type of site including wells, springs, seeps, tinajas, rivers, a lake, and an irrigation ditch. Field measurements were taken at each site and they included pH, specific conductance, temperature, barometric pressure, dissolved oxygen, alkalinity, turbidity, and discharge rates where applicable. Water samples collected were sent to the U.S. Geological Survey National Water Quality Laboratory and analyzed for major ions, trace elements, and nutrients. The National Water Quality Laboratory also analyzed selected samples for mercury and petroleum hydrocarbons. Additional samples at selected sites were collected and analyzed for cyanide, radiochemistry, and suspended sediment by U.S. Geological Survey contract labs. Fecal-indicator bacteria (Escherichia coli) were sampled for at selected sites as another indicator of water quality. Quality control for this study was achieved through proper training of field personnel, use of standard U.S. Geological Survey field and laboratory protocols, collection of sample blanks and replicates, and a thorough review of the water-quality analyses. Measured field pH ranged from 6.0 to 8.8, within normal range for springs and rivers, at most sites. Concentrations of dissolved solids ranged from 48 to 8,680 mg/L and the majority of samples had concentrations of dissolved solids below 900 mg/L. Trace-element concentrations at most sites were at or near the laboratory reporting levels. The highest overall trace-element concentrations were found at U.S. Highway 160 Spring near Park Entrance to Mesa Verde National Park. Concentrations of uranium in samples at all sites ranged from below the detection limit to 55.7 ?g/L. Water samples from selected sites were analyzed for total petroleum hydrocarbons and concentrations of total petroleum hydrocarbons were at or above the laboratory detection limit in samples at six National Park units. Ten sites were sampled for Escherichia coli and positive counts were found at 9 out of the ten sites, the highest colony counts were found at Chinle Creek at Chinle, AZ in Canyon de Chelly National Monument. Measured concentrations of dissolved ammonia, nitrite, and nitrate were at or near laboratory reporting levels at most sites; nitrate concentrations ranged from below the reporting limit (0.047 mg/L) to 9.77 mg/L. Samples that were analyzed for mercury had concentrations below or at the laboratory reporting level. Concentrations of cyanide were less than the laboratory reporting level for all samples except two, Spruce Tree House Spring in Mesa Verde National Park and Pine Tree Canyon Tinaja in Canyon de Chelly National Monument, which had average concentrations of .042 and .011 ?g/L respectively. Gross alpha/beta radioactivity counts were below the U.S. Environmental Protection Agency maximum contaminant level except for samples from Casa Chiquita Well  Middle at Chaco Culture National Historical Park which averaged 35 pCi/L. Suspended-sediment concentrations were variable and ranged from 10 to 150,000 mg/L.

Open-File Report

The Water-Quality Partnership for National Parks—U.S. Geological Survey and National Park Service, 1998–2016

The U.S. Geological Survey (USGS) and the National Park Service (NPS) work together through the USGS–NPS Water-Quality Partnership to support a broad range of policy and management needs related to high-priority water-quality issues in national parks. The program was initiated in 1998 as part of the Clean Water Action Plan, a Presidential initiative to commemorate the 25th anniversary of the Clean Water Act. Partnership projects are developed jointly by the USGS and the NPS. Studies are conducted by the USGS and findings are used by the NPS to guide policy and management actions aimed at protecting and improving water quality. The National Park Service manages many of our Nation’s most highly valued aquatic systems across the country, including portions of the Great Lakes, ocean and coastal zones, historic canals, reservoirs, large rivers, high-elevation lakes and streams, geysers, springs, and wetlands. So far, the Water-Quality Partnership has undertaken 217 projects in 119 national parks. In each project, USGS studies and assessments ( http://water.usgs.gov/nps_partnership/pubs.php ) have supported science-based management by the NPS to protect and improve water quality in parks. Some of the current projects are highlighted in the NPS Call to Action Centennial initiative, Crystal Clear, which celebrates national park water-resource efforts to ensure clean water for the next century of park management ( http://www.nature.nps.gov/water/crystalclear/ ). New projects are proposed each year by USGS scientists working in collaboration with NPS staff in specific parks. Project selection is highly competitive, with an average of only eight new projects funded each year out of approximately 75 proposals that are submitted. Since the beginning of the Partnership in 1998, 189 publications detailing project findings have been completed. The 217 studies have been conducted in 119 NPS-administered lands, extending from Denali National Park and Preserve in Alaska to Everglades National Park in Florida, and from Acadia National Park in the Northeast to park lands in Hawaii and Pacific Island territories in the West. Project goals range from periodic stream monitoring, to determining the occurrence and concentrations of contaminants and the potential for them to exceed human health or aquatic life criteria, to conducting interpretive studies to evaluate the effect(s) on or vulnerability of national park resources to visitor usage and other natural and anthropogenic activities.

Fact Sheet

EAARL Coastal Topography and Imagery-Naval Live Oaks Area, Gulf Islands National Seashore, Florida, 2007

These remotely sensed, geographically referenced color-infrared (CIR) imagery and elevation measurements of lidar-derived bare-earth (BE) topography, first-surface (FS) topography, and canopy-height (CH) datasets were produced collaboratively by the U.S. Geological Survey (USGS), St. Petersburg Science Center, St. Petersburg, FL; the National Park Service (NPS), Gulf Coast Network, Lafayette, LA; and the National Aeronautics and Space Administration (NASA), Wallops Flight Facility, VA. This project provides highly detailed and accurate datasets of the Naval Live Oaks Area in Florida's Gulf Islands National Seashore, acquired June 30, 2007. The datasets are made available for use as a management tool to research scientists and natural-resource managers. An innovative airborne lidar instrument originally developed at the NASA Wallops Flight Facility, and known as the Experimental Advanced Airborne Research Lidar (EAARL), was used during data acquisition. The EAARL system is a raster-scanning, waveform-resolving, green-wavelength (532-nanometer) lidar designed to map near-shore bathymetry, topography, and vegetation structure simultaneously. The EAARL sensor suite includes the raster-scanning, water-penetrating full-waveform adaptive lidar, a down-looking red-green-blue (RGB) digital camera, a high-resolution multispectral CIR camera, two precision dual-frequency kinematic carrier-phase GPS receivers, and an integrated miniature digital inertial measurement unit, which provide for sub-meter georeferencing of each laser sample. The nominal EAARL platform is a twin-engine Cessna 310 aircraft, but the instrument may be deployed on a range of light aircraft. A single pilot, a lidar operator, and a data analyst constitute the crew for most survey operations. This sensor has the potential to make significant contributions in measuring sub-aerial and submarine coastal topography within cross-environmental surveys. Elevation measurements were collected over the survey area using the EAARL system, and the resulting data were then processed using the Airborne Lidar Processing System (ALPS), a custom-built processing system developed in a NASA-USGS collaboration. ALPS supports the exploration and processing of lidar data in an interactive or batch mode. Modules for presurvey flight-line definition, flight-path plotting, lidar raster and waveform investigation, and digital camera image playback have been developed. Processing algorithms have been developed to extract the range to the first and last significant return within each waveform. ALPS is used routinely to create maps that represent submerged or sub-aerial topography. Specialized filtering algorithms have been implemented to determine the 'bare earth' under vegetation from a point cloud of last return elevations. For more information about similar projects, please visit the Decision Support for Coastal Science and Management website.

Data Series

EAARL Coastal Topography-Mississippi and Alabama Barrier Islands, Post-Hurricane Gustav, 2008

These remotely sensed, geographically referenced elevation measurements of lidar-derived bare-earth (BE) and first-surface (FS) topography datasets were produced collaboratively by the U.S. Geological Survey (USGS), St. Petersburg Coastal and Marine Science Center, St. Petersburg, FL; the National Park Service (NPS), Gulf Coast Network, Lafayette, LA; and the National Aeronautics and Space Administration (NASA), Wallops Flight Facility, VA. This project provides highly detailed and accurate datasets of a portion of the Mississippi and Alabama barrier islands, acquired post-Hurricane Gustav (September 2008 hurricane) on September 8, 2008. The datasets are made available for use as a management tool to research scientists and natural-resource managers. An innovative airborne lidar instrument originally developed at the NASA Wallops Flight Facility, and known as the Experimental Advanced Airborne Research Lidar (EAARL), was used during data acquisition. The EAARL system is a raster-scanning, waveform-resolving, green-wavelength (532-nanometer) lidar designed to map near-shore bathymetry, topography, and vegetation structure simultaneously. The EAARL sensor suite includes the raster-scanning, water-penetrating full-waveform adaptive lidar, a down-looking red-green-blue (RGB) digital camera, a high-resolution multispectral color infrared (CIR) camera, two precision dual-frequency kinematic carrier-phase GPS receivers, and an integrated miniature digital inertial measurement unit, which provide for sub-meter georeferencing of each laser sample. The nominal EAARL platform is a twin-engine Cessna 310 aircraft, but the instrument may be deployed on a range of light aircraft. A single pilot, a lidar operator, and a data analyst constitute the crew for most survey operations. This sensor has the potential to make significant contributions in measuring sub-aerial and submarine coastal topography within cross-environmental surveys. Elevation measurements were collected over the survey area using the EAARL system, and the resulting data were then processed using the Airborne Lidar Processing System (ALPS), a custom-built processing system developed in a NASA-USGS collaboration. ALPS supports the exploration and processing of lidar data in an interactive or batch mode. Modules for presurvey flight-line definition, flight-path plotting, lidar raster and waveform investigation, and digital camera image playback have been developed. Processing algorithms have been developed to extract the range to the first and last significant return within each waveform. ALPS is used routinely to create maps that represent submerged or sub-aerial topography. Specialized filtering algorithms have been implemented to determine the 'bare earth' under vegetation from a point cloud of last return elevations. For more information about similar projects, please visit the Decision Support for Coastal Science and Management website.

Data Series

Vital sign monitoring is good medicine for parks

Nearly 70 years ago a young ranger naturalist working in Yellowstone National Park (YNP), Frederick B. Turner, became fascinated with the abundance of frogs next to his cabin at “Soldier Creek” (known as Lodge Creek today). This interest blossomed into Turner’s PhD research and his publication in 1960 about the local population of Columbia spotted frogs (shown to right) became a classic for herpetologists. Unfortunately, the frog population Turner studied had a less positive future in store. Research by Idaho State University biologists in the 1990s revealed the Lodge Creek population had dwindled by 80%. Now, most of Turner’s study area is bereft of spotted frogs, and the remnant population near Yellowstone Lake is affected by a steep decline in reproduction and frequent disease outbreaks. Meanwhile, amphibian population declines documented worldwide, including in national parks of the western U.S., have become common. In YNP and neighboring Grand Teton National Park, we face the important questions of whether widespread amphibian declines are occurring here and if so, what do they portend. Can amphibians inform us about the health and changing conditions of wetlands in YNP? What are the implications of diminishing wetlands for other water-dependent species? And, more broadly, can amphibian and other living organisms serve as reliable indicators or vital signs for park health? In this issue of Yellowstone Science, we discuss how ecosystem science is taking cues from the medical field by relying on vital sign monitoring programs to assess ecosystem health.

Yellowstone Science

National Park Service Vegetation Inventory Program, Cuyahoga Valley National Park, Ohio

The National Park Service (NPS) Vegetation Inventory Program (VIP) is an effort to classify, describe, and map existing vegetation of national park units for the NPS Natural Resource Inventory and Monitoring (I&M) Program. The NPS VIP is managed by the NPS Biological Resources Management Division and provides baseline vegetation information to the NPS Natural Resource I&M Program. The U.S. Geological Survey (USGS) Vegetation Characterization Program lends a cooperative role in the NPS VIP. The USGS Upper Midwest Environmental Sciences Center, NatureServe, and NPS Cuyahoga Valley National Park (CUVA) have completed vegetation classification and mapping of CUVA. Mappers, ecologists, and botanists collaborated to identify and describe vegetation types within the National Vegetation Classification Standard (NVCS) and to determine how best to map them by using aerial imagery. The team collected data from 221 vegetation plots within CUVA to develop detailed descriptions of vegetation types. Data from 50 verification sites were also collected to test both the key to vegetation types and the application of vegetation types to a sample set of map polygons. Furthermore, data from 647 accuracy assessment (AA) sites were collected (of which 643 were used to test accuracy of the vegetation map layer). These data sets led to the identification of 45 vegetation types at the association level in the NVCS at CUVA. A total of 44 map classes were developed to map the vegetation and general land cover of CUVA, including the following: 29 map classes represent natural/semi-natural vegetation types in the NVCS, 12 map classes represent cultural vegetation (agricultural and developed) in the NVCS, and 3 map classes represent non-vegetation features (open-water bodies). Features were interpreted from viewing color-infrared digital aerial imagery dated October 2010 (during peak leaf-phenology change of trees) via digital onscreen three-dimensional stereoscopic workflow systems in geographic information systems (GIS). The interpreted data were digitally and spatially referenced, thus making the spatial database layers usable in GIS. Polygon units were mapped to either a 0.5 ha or 0.25 ha minimum mapping unit, depending on vegetation type. A geodatabase containing various feature-class layers and tables shows the locations of vegetation types and general land cover (vegetation map), vegetation plot samples, verification sites, AA sites, project boundary extent, and aerial photographic centers. The feature-class layer and relate tables for the CUVA vegetation map provides 4,640 polygons of detailed attribute data covering 13,288.4 ha, with an average polygon size of 2.9 ha. Summary reports generated from the vegetation map layer show map classes representing natural/semi-natural types in the NVCS apply to 4,151 polygons (89.4% of polygons) and cover 11,225.0 ha (84.5%) of the map extent. Of these polygons, the map layer shows CUVA to be 74.4% forest (9,888.8 ha), 2.5% shrubland (329.7 ha), and 7.6% herbaceous vegetation cover (1,006.5 ha). Map classes representing cultural types in the NVCS apply to 435 polygons (9.4% of polygons) and cover 1,825.7 ha (13.7%) of the map extent. Map classes representing non-NVCS units (open water) apply to 54 polygons (1.2% of polygons) and cover 237.7 ha (1.8%) of the map extent. A thematic AA study was conducted of map classes representing natural/semi-natural types in the NVCS. Results present an overall accuracy of 80.7% (kappa index of 79.5%) based on data from 643 of the 647 AA sites. Most individual map-class themes exceed the NPS VIP standard of 80% with a 90% confidence interval. The CUVA vegetation mapping project delivers many geospatial and vegetation data products in hardcopy and/or digital formats. These products consist of an in-depth project report discussing methods and results, which include descriptions and a dichotomous key to vegetation types, map classification and map-class descriptions, and a contingency table showing AA results. The suite of products also includes a database of vegetation plots, verification sites, and AA sites; digital pictures of field sites; field data sheets; aerial photographic imagery; hardcopy and digital maps; and a geodatabase of vegetation types and land cover (map layer), fieldwork locations (vegetation plots, verification sites, and AA sites), aerial photographic index, project boundary, and metadata. All geospatial products are projected in Universal Transverse Mercator, Zone 17, by using the North American Datum of 1983. Information on the NPS VIP and completed park mapping projects are located on the Internet at <http://science.nature.nps.gov/im/inventory/veg> and <http://www.usgs.gov/core_science_systems/csas/vip/index.html>.

Natural Resource Technical Report