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USGS2013

Phosphorus losses from agricultural watersheds in the Mississippi Delta

Phosphorus (P) loss from agricultural fields is of environmental concern because of its potential impact on water quality in streams and lakes. The Mississippi Delta has long been known for its fish productivity and recreational value, but high levels of P in fresh water can lead to algal blooms that have many detrimental effects on natural ecosystems. Algal blooms interfere with recreational and aesthetic water use. However, few studies have evaluated P losses from agricultural watersheds in the Mississippi Delta. To better understand the processes influencing P loss, rainfall, surface runoff, sediment, ortho-P (orthophosphate, PO 4 –P), and total P (TP) were measured (water years 1996–2000) for two subwatersheds (UL1 and UL2) of the Deep Hollow Lake Watershed and one subwatershed of the Beasley Lake Watershed (BL3) primarily in cotton production in the Mississippi Delta. Ortho-P concentrations ranged from 0.01 to 1.0 mg/L with a mean of 0.17 mg/L at UL1 (17.0 ha), 0.36 mg/L at UL2 (11.2 ha) and 0.12 mg/L at BL3 (7.2 ha). The TP concentrations ranged from 0.14 to 7.9 mg/L with a mean of 0.96 mg/L at UL1, 1.1 mg/L at UL2 and 1.29 mg/L at BL3. Among the three sites, UL1 and UL2 received P application in October 1998, and BL3 received P applications in the spring of 1998 and 1999. At UL1, ortho-P concentrations were 0.36, 0.25 and 0.16 for the first, second and third rainfall events after P application, respectively; At UL2, ortho-P concentrations were 1.0, 0.66 and 0.65 for the first, second and third rainfall events after P application, respectively; and at BL3, ortho-P concentrations were 0.11, 0.22 and 0.09 for the first, second and third rainfall events after P application, respectively. P fertilizer application did influence P losses, but high P concentrations observed in surface runoff were not always a direct result of P fertilizer application or high rainfall. Application of P in the fall (UL1 and UL2) resulted in more ortho-P losses, likely because high rainfall often occurred in the winter months soon after application. The mean ortho-P concentrations were higher at UL1 and UL2 than those at BL3, although BL3 received more P application during the monitoring period, because P was applied in spring at BL3. However, tillage associated with planting and incorporating applied P in the spring (BL3) may have resulted in more TP loss in sediment, thus the mean TP concentration was the highest at BL3. Ortho-P loss was correlated with surface runoff; and TP loss was correlated with sediment loss. These results indicate that applying P fertilizer in the spring may be recommended to reduce potential ortho-P loss during the fallow winter season; in addition, conservation practices may reduce potential TP loss associated with soil loss.

Mississippi↗

USGS1993

Flow recommendations for maintaining riparian vegetation along the Upper Missouri River, Montana

Montana Power Company, Inc. (MPC) submitted a final license application to the Federal Energy Regulatory Commission (FERC) on November 30, 1992. In this application, MPC proposed a plan for the protection of fish, wildlife, habitat, and water-quality resources. One concern was maintenance of woody riparian vegetation along the Missouri River, especially along the Wild and Scenic reach of the river, where the riparian forest occurs in relatively small discontinuous stands. The objectives of this project were 1) to recommend flows that would protect and enhance riparian forests along the Missouri River, and 2) to develop elements of an environmental monitoring program that could be used to assess the effectiveness of the recommended flows. Plains cottonwood ( Populus deltoides subsp. monilifera ) is the key structural component of riparian forests along the Missouri River. Therefore, we focused our analysis on factors affecting populations of this species. Previous work had demonstrated that the age structure of cottonwood populations is strongly influenced by aspects of flow that promote successfully establishment. In this study our approach was to determine the precise age of plains cottonwood trees growing along the Upper Missouri River and to relate years of establishment to the flow record. Our work was carried out between Coal Banks Landing and the Fred G. Robinson Bridge within the Wild and Scenic portion of the Missouri River. This segment of the river occupies a narrow valley and exhibits little channel migration. Maps and notes from the journals of Lewis and Clark (1804-1806) suggest that the present distribution and abundance of cottonwoods within the study reach is generally similar to presettlement conditions. Flows in the study reach are influenced by a number of dams and diversions, most importantly, Canyon Ferry and Tiber Dams. Although flow regulation has decreased peak flows and increased low flows, the gross seasonal pattern of flow has not been greatly altered. Most cottonwood establishment in our study reach occurred in years with a peak mean daily flow greater than 1,400 m 3 /s (49,434 cfs), or in the two years following such a flow. These years include 35 out of the 111 years of record, and account for establishment of 47 of 60 trees examined, a highly significant relationship. Infrequent establishment of cottonwood trees is not the result of scarcity of seed or seedlings. In the study reach seedlings become established most years on bare, relatively low surfaces deposited by the river. However, the high elevation of establishment of all trees dating to before 1978 indicates that only individuals established on high flood deposits are able to survive subsequent floods and ice jams. In order to maintain the present abundance of plains cottonwood in the study area we recommend flood flows in excess of 1,400 m 3 /s (49,434 cfs) measures as mean daily discharge at Fort Benton (U.S. Geological Survey gage 06090800) with a recurrence interval of approximately 9 years. Because cottonwood seeds remain viable for only a few weeks, and because seedling require a moist, bare surface, we further recommend maintenance of the historic timing of flooding with peak flood flows occurring between mid-May and late-June. Flow is not the only factor influencing cottonwood regeneration along this reach of the Missouri River. Land management, especially cattle grazing, is clearly having an impact, and changes in cottonwood populations could be expected if these practices were altered. However, the dependence of cottonwood establishment on high flow is clear in this reach in spite of the effects of other factors. Given the value of the resource, we strongly suggest establishment of a monitoring program to determine the effectiveness of the recommended flows and to provide the data necessary for refining them. We recommend a monitoring program that would include: 1) ten permanent, widely space channel cross sections for annual measurement of channel geometry and cottonwood establishment, growth, and survival; 2) five livestock enclosures to monitor the influence of grazing in the study area; and 3) low-elevation aerial photography of the reach every five years and after every flood to detect changes in channel geometry and forested area. Because cottonwood establishment is episodic, a long-term commitment to the monitoring effort is essential. In addition, cross sections and exclosures should be easy enough to access that measurements during flood years are possible.

Montana↗

USGS2009

Effects of highway construction on stream water quality and macroinvertebrate condition in a mid-Atlantic highlands watershed, USA

Refining best management practices (BMPs) for future highway construction depends on a comprehensive understanding of environmental impacts from current construction methods. Based on a before-after-control impact (BACI) experimental design, long-term stream monitoring (1997–2006) was conducted at upstream (as control, n = 3) and downstream (as impact, n = 6) sites in the Lost River watershed of the Mid-Atlantic Highlands region, West Virginia. Monitoring data were analyzed to assess impacts of during and after highway construction on 15 water quality parameters and macroinvertebrate condition using the West Virginia stream condition index (WVSCI). Principal components analysis (PCA) identified regional primary water quality variances, and paired t tests and time series analysis detected seven highway construction-impacted water quality parameters which were mainly associated with the second principal component. In particular, impacts on turbidity, total suspended solids, and total iron during construction, impacts on chloride and sulfate during and after construction, and impacts on acidity and nitrate after construction were observed at the downstream sites. The construction had statistically significant impacts on macroinvertebrate index scores (i.e., WVSCI) after construction, but did not change the overall good biological condition. Implementing BMPs that address those construction-impacted water quality parameters can be an effective mitigation strategy for future highway construction in this highlands region.

West Virginia↗

USGS1974

Selected chlorinated hydrocarbons in bottom material from streams tributary to San Francisco Bay

As part of a study of the environmental quality of San Francisco Bay, bottom material from 26 streams tributary to the Bay were analyzed for chlordane, DDD, DDE, DDT, and PCB residues. These compounds were present in essentially all streams tested. Chlordane proved to be ubiquitous, with a concentration range similar to that of the other compounds. Noteworthy was the occurrence in one stream of polychlorinated naphthalene residues. Compounds occurring in concentrations above 20 μg/kg were identified in most instances by combined gas chromatography/mass spectrometry.

California↗

USGS2021

Microbial and viral indicators of pathogens and human health risks from recreational exposure to waters impaired by fecal contamination

Fecal indicator bacteria (FIB) (e.g., fecal coliforms, Escherichia coli , and enterococci) have been used for decades to monitor for and protect the public from waterborne pathogens from fecal contamination. However, FIB may not perform well at predicting the presence of waterborne pathogens or human health outcomes from recreational exposure to fecal-contaminated surface waters. Numerous factors can influence the relationship between FIB and pathogens or human health outcomes, including the source(s) of contamination, the type of pathogen(s) present, differences in the survival and behavior of FIB and pathogens in the wastewater conveyance and treatment process, and varying environmental conditions. As a result, different indicators, such as source-specific microbial source tracking (MST) markers and viral fecal indicators, have been used as possible surrogates to better approximate pathogen abundance and human health risks in recreational waters. The performance of these alternative indicators has been mixed, with some promise of viral indicators better approximating viral pathogens than bacterial fecal indicators, and FIB generally more closely associated with bacterial and protozoal pathogen presence than human MST markers. Many of the assays to detect and quantify fecal indicators and pathogens are polymerase chain reaction-based assays, which detect and quantify nucleic acid [deoxyribonucleic acid (DNA) and ribonucleic acid (RNA)] sequences specific to a target of interest. Recent advances in DNA and RNA sequencing technologies may push the field toward metabarcoding approaches, where multiple targets can be detected and quantified simultaneously. Metabarcoding is currently more applicable to bacterial and protozoal assessments than viral assessments based on a lack of universal metabarcoding markers for viruses. Innovative technologies, such as biosensors and nanotechnologies, may provide more sensitive and accurate tools to detect and quantify pathogens. When a specific pathogen is of concern for a recreational water body, a practical approach in estimating the likelihood of human health outcomes is the application of quantitative microbial risk assessments (QMRAs). Quantitative microbial risk assessments can be used to model the likelihood of pathogen-specific human health outcomes from recreational exposure as a function of a surrogate indicator. Inputs for QMRAs include the ratio between the indicator to be monitored and the pathogen of interest, the concentration of the indicator, the amount of water ingested, and the likelihood of the health outcome based on the estimated amount of pathogen consumed. There are numerous unknowns about the behavior and survival of fecal indicators and pathogens in environmental waters. Developing accurate models to predict pathogen concentrations from fecal indicators in recreational waters will require a better understanding of these unknowns. Current methods and technologies for detecting and quantifying fecal indicators and pathogens are limited due to the rare and patchy nature of pathogens. Technological advances may help improve sensitivity for detecting and quantifying pathogens.

Journal of Sustainable Water in the Built Environm↗

USGS2018

Annotated bibliography of scientific research on greater sage-grouse published since January 2015

The greater sage-grouse ( Centrocercus urophasianus ; hereafter GRSG) has been a focus of scientific investigation and management action for the past two decades. The 2015 U.S. Fish and Wildlife Service listing determination of “not warranted” was in part due to a large-scale collaborative effort to develop strategies to conserve GRSG populations and their habitat and to reduce threats to both. New scientific information augments existing knowledge and can help inform updates or modifications to existing plans for managing GRSG and sagebrush ecosystems. However, the sheer number of scientific publications can be a challenge for managers tasked with evaluating and determining the need for potential updates to existing planning documents. To assist in this process, the U.S. Geological Survey (USGS) has reviewed and summarized the scientific literature published since January 1, 2015. To identify articles and reports published about GRSG, we first conducted a structured search of three reference databases (Web of Science, Scopus, and Google Scholar) using the search term “greater sage-grouse.” We refined the initial list of products by (1) removing duplicates, (2) excluding products that were not published as research or scientific review articles in peer-reviewed journals or as formal government technical reports, and (3) retaining only those products for which GRSG or their habitat was a research focus. We summarized the contents of each product by using a consistent structure (background, objectives, methods, location, findings, and implications) and assessed the content of each product relevant to a list of 31 management topics. These topics include GRSG biology and habitat characteristics along with potential management actions, land uses, and environmental factors related to GRSG management and conservation. We also noted which articles/reports created new geospatial data. The final search was conducted on January 6, 2018, and application of our criteria resulted in the inclusion of 169 published products (2 of these products were published corrections to journal articles). The management topics most commonly addressed were GRSG behavior or demographics and GRSG habitat selection or habitat characteristics at broad or site scales. Few products addressed captive breeding, recreation, wild horses and burros, and range management structures (including fences). We include in this annotated bibliography the full citation, product summary, and management topics addressed by each product. The online version of this bibliography ( https://apps.usgs.gov/gsgbib/index.php ) is searchable by topic and location and includes links to the original publications. A substantial body of literature has been compiled based on research explicitly related to the conservation, management, monitoring, and assessment of GRSG. These studies may inform planning and management actions that seek to balance conservation, economic, and social objectives and manage diverse resource uses and values across the western United States. The review process for this product included requesting input on each summary from one or more authors of the original peer-reviewed article or report and a formal review of the entire document by three independent reviewers and, subsequently, the USGS Bureau Approving Official. This process is consistent with USGS Fundamental Science Practices.

Open-File Report↗

USGS2025

A metadata checklist and data formatting guidelines to make eDNA FAIR (Findable, Accessible, Interoperable and Reusable)

The success of environmental DNA (eDNA) approaches for species detection has revolutionized biodiversity monitoring and distribution mapping. Targeted eDNA amplification approaches, such as quantitative PCR, have improved our understanding of species distribution, and metabarcoding-based approaches have enabled biodiversity assessment at unprecedented scales and taxonomic resolution. eDNA datasets, however, are often scattered across repositories with inconsistent formats, varying access restrictions, and inadequate metadata; this limits their interoperation, reuse, and overall impact. Adopting FAIR (Findable, Accessible, Interoperable, and Reusable) data practices with eDNA data can transform the monitoring of biodiversity and individual species and support data-driven biodiversity management across broad scales. FAIR practices remain underdeveloped in the eDNA community, partly due to gaps in adapting existing vocabularies, such as Darwin Core (DwC) and Minimum Information about any (x) Sequence (MIxS), to eDNA-specific needs and workflows. To address these challenges, we propose a comprehensive FAIR eDNA (FAIRe) Metadata Checklist, which integrates existing data standards and introduces new terms tailored to eDNA workflows. Metadata are systematically linked to both raw data (e.g., metabarcoding sequences, Ct/Cq values of targeted qPCR assays) and derived biological observations (e.g., Amplicon Sequence Variant (ASV)/Operational Taxonomic Unit (OTU) tables, species presence/absence). Along with formatting guidelines, tools, templates, and example datasets, we introduce a standardized, ready-to-use approach for FAIR eDNA practices. Through broad collaboration, we seek to integrate these guidelines into established biodiversity and molecular data standards, promote journal data policies, and foster user-driven improvements and uptake of FAIR practices among eDNA data producers. In proposing this standardized approach and developing a long-term plan with key databases and data standard organizations, the goal is to enhance accessibility, maximize reuse, and elevate the scientific impact of these valuable biodiversity data resources.

Environmental DNA↗

USGS2019

Environmental and biological factors influence migratory Sea Lamprey catchability: Implications for tracking abundance in the Laurentian Great Lakes

Sea Lamprey Petromyzon marinus population trends in the Great Lakes are tracked by trapping migratory adults in tributaries and using mark and recapture techniques to estimate abundance. Understanding what environmental and biological factors influence Sea Lamprey capture in tributaries is crucial to developing efficient trapping methods and reliable abundance estimates. We analyzed data from trapping sites located on eight Great Lakes tributaries using Cormack-Jolly-Seber models and examined how water temperature, discharge, sex, and length influenced Sea Lamprey apparent survival and capture probability. Sea Lamprey apparent survival was negatively associated with water temperature in all tributaries. Additionally, the odds of small Sea Lamprey (≤45 cm) remaining available to capture were 39% less (95% CI: 63% decrease – 1% increase) than large (>45 cm) lamprey odds. These observed relationships were used to investigate if bias in abundance estimates using the pooled-Petersen estimator and Jolly-Seber models was expected to be similar across trapping locations or influenced by variable environmental conditions and biological traits. Pooled-Petersen abundance estimates had a positive bias when datasets were generated from simulated populations with empirical relationships between environmental characteristics and catchability. The degree of bias depended upon changes in stream warming patterns and was not consistent among trapping locations. Jolly-Seber models using data from either weekly-batch-marked or uniquely-marked individuals generated abundance estimate with low bias when data quality was high, but performed poorly in scenarios with few recaptured Sea Lamprey. This research can promote improved Sea Lamprey monitoring efforts by providing insight into the reliability of the pooled-Petersen abundance estimator as a tool for tracking Sea Lamprey populations and demonstrating the limitations of adopting more robust methods when data are sparse.

Laurentian Great lakes↗

USGS2018

Burn severity controls on postfire Araucaria‐Nothofagus regeneration in the Andean Cordillera

Aim The aim of the study was to investigate postfire regeneration patterns of Araucaria‐Nothofagus forests on the west slope of the Andes; to evaluate the relationship between remotely sensed burn severity and forest mortality; and to assess controls of burn severity on forest response at local spatio‐temporal scales. Location Araucanía region in the western Andean Range of south‐central Chile where fire occurred during the 2001–2002 season. Methods Sampling of prefire stand structure and postfire vegetation response was performed along a burn severity gradient a decade after the fire. We evaluated the relationship between field‐measured tree mortality and satellite‐derived burn severity using a generalized linear model. We fit zero‐inflated mixture models to regeneration data of each genus to assess the importance of abiotic variables, stand characteristics, and biotic interactions. Results The relative version of the delta Normalized Burn Ratio explained 85% of the variability in canopy mortality. Nearly 12,000 hectares burned; the majority at high severity (67%). Regeneration densities of both genera were lower at higher levels of burn severity and higher with greater total basal area (live, dead, and down trees). The relative effect size of burn severity on regeneration was nearly twice as large for Nothofagus , which suggests information legacies of Araucaria have cascading effects on postdisturbance material legacies. Main conclusions Araucaria‐Nothofagus mortality from wildfire can be readily mapped using satellite‐derived burn severity. Although environmental site characteristics and biotic interactions mediate regeneration, basal area, and burn severity are the main mechanisms controlling regeneration. Forest refugia and postfire regeneration are vulnerable to recurrent fire. Therefore, we expect future fire (either increased severity or frequency), driven by landscape level changes, as a potential mechanism that can reduce local resilience of these forests as initial postfire material legacies (e.g., refugia and regeneration) are removed from the landscape. Our findings highlight an approach to quantify important attributes of forest disturbance and refugia, and identify areas for monitoring postdisturbance regeneration as the forests throughout south‐central Chile and Argentina face a multitude of potential change agents.

Journal of Biogeography↗

USGS2018

Efficiency of sampling sunfishes using snorkeling in clear, warmwater streams of the south-central United States

The continued evaluation of fish-sampling gears and methods is essential to identify their applicability across environmental conditions and among species. Although limited by visibility, snorkeling has potential advantages relative to other fish-sampling gears in wadeable streams (e.g., minimally intrusive, cost effective, and appropriate in deeper areas). Clear water is common to warm-water streams; however, the use of snorkeling for monitoring stream-fish populations has largely focused on cold-water systems. To assess relative snorkeling efficiency in warm-water streams, we compared standardized single-pass snorkel counts to tow-barge electrofishing abundance estimates for six sunfishes (Centrarchidae) in the Ozark Highlands ecoregion of northwest Oklahoma and southwest Missouri under relatively similar environmental conditions (i.e., clear water, cobble substrates, low-flow conditions). Snorkeling efficiency was variable among sunfishes and consistently low for species with cryptic traits and habitat use. We also did not detect cryptic sunfishes (i.e., a single individual was not encountered) using snorkeling at multiple stream reaches where estimated abundance was > 50 within a 0.5- to 1.0-km stream reach. Our findings indicate that snorkeling has applications for monitoring sunfish populations and assemblages when using an abundance estimator or accounting for imperfect detection; however, it is inappropriate for estimating population size of cryptic sunfishes. We encourage continued research into the applicability of snorkeling to estimate warm-water stream fish abundance.

Missouri, Oklahoma↗

USGS2020

Determination of low concentrations of acetochlor in water by automated solid-phase extraction and gas chromatography with mass-selective detection

A sensitive and reliable gas chromatographic/mass spectrometric (GC/MS) method for determining acetochlor in environmental water samples was developed. The method involves automated extraction of the herbicide from a filtered 1 L water sample through a C 18 solid-phase extraction column, elution from the column with hexane-isopropyl alcohol (3 + 1), and concentration of the extract with nitrogen gas. The herbicide is quantitated by capillary/column GC/MS with selected-ion monitoring of 3 characteristic ions. The single-operator method detection limit for reagent water samples is 0.0015 μg/L Mean recoveries ranged from about 92 to 115% for 3 water matrixes fortified at 0.05 and 0.5 μg\L. Average single-operator precision, over the course of 1 week, was better than 5%.

Journal of AOAC International↗

USGS1994

Biological monitoring of environmental quality: The use of developmental instability

Distributed robustness is thought to influence the buffering of random phenotypic variation through the scale-free topology of gene regulatory, metabolic, and protein-protein interaction networks. If this hypothesis is true, then the phenotypic response to the perturbation of particular nodes in such a network should be proportional to the number of links those nodes make with neighboring nodes. This suggests a probability distribution approximating an inverse power-law of random phenotypic variation. Zero phenotypic variation, however, is impossible, because random molecular and cellular processes are essential to normal development. Consequently, a more realistic distribution should have a y-intercept close to zero in the lower tail, a mode greater than zero, and a long (fat) upper tail. The double Pareto-lognormal (DPLN) distribution is an ideal candidate distribution. It consists of a mixture of a lognormal body and upper and lower power-law tails.

Journal of Environmental Engineering↗

USGS2019

The effects of seasonal temperature and photoperiod manipulation on reproduction in the eastern elliptio Elliptio complanata

The eastern elliptio Elliptio complanata is a species of freshwater mussel common to streams and rivers of the Atlantic Coast. Egg fertilization, larval brooding, and glochidial release are reported to occur within a period of several weeks during early to midsummer. In this study, mussels were exposed to manipulated photoperiod and water temperatures to prolong the availability of glochidia for use in artificial propagation and research. Brooding mussels were collected from Pine Creek, Tioga County, PA, in late December and were housed in groups subjected to one of four environmental treatments: natural temperature and photoperiod, 6-wk delay in natural conditions, 12-wk delay in natural conditions, and natural temperature and photoperiod with a winter low of 10°C. Reproductive activity was monitored for 1 y. Mussels subjected to natural conditions released mature glochidia between 16°C and 19°C with a photoperiod of 15 h of light. Temperature and photoperiod delays of 6 and 12 wk delayed reproduction proportional to the treatment, and constant 10°C winter low temperatures slightly shifted the timing of glochidial release. Survival during the study was high (96%–100%). Data indicate that the seasonal availability of E. complanata glochidia can be extended 3-fold using photoperiod and temperature manipulation.

Journal of Shellfish Research↗

USGS2011

Seasonal movements and environmental triggers to fall migration of Sage Sparrows

Post-breeding ecology of shrubland passerines prior to onset of migration is unknown relative to dynamics of breeding areas. We radiomarked and monitored 38 Sage Sparrows (Amphispiza belli ssp. nevadensis) at one site in Oregon and two in Nevada from September to mid-November 2007 to track local movements, estimate seasonal range sizes, and characterize weather patterns triggering onset of migration. Median area used by Sage Sparrows monitored between 3 and 18 days during or prior to migration was 14 ha; maximum daily movement was 15 km. Radio-marked Sage Sparrows at each location departed individually, rather than en masse, corresponding with passage of cold front weather systems. Conventional telemetry techniques limited our ability to monitor Sage Sparrows beyond pre-migratory periods and precluded detecting and tracking actual movements during migration. ?? 2011 by the Wilson Ornithological Society.

Wilson Journal of Ornithology↗

USGS2022

In situ soil moisture sensors in undisturbed soils

Soil moisture directly affects operational hydrology, food security, ecosystem services, and the climate system. However, the adoption of soil moisture data has been slow due to inconsistent data collection, poor standardization, and typically short record duration. Soil moisture, or quantitatively volumetric soil water content (SWC), is measured using buried, in situ sensors that infer SWC from an electromagnetic response. This signal can vary considerably with local site conditions such as clay content and mineralogy, soil salinity or bulk electrical conductivity, and soil temperature; each of these can have varying impacts depending on the sensor technology., Furthermore, poor soil contact and sensor degradation can affect the quality of these readings over time. Unlike more traditional environmental sensors, there are no accepted standards, maintenance practices, or quality controls for SWC data. As such, SWC is a challenging measurement for many environmental monitoring networks to implement. Here, we attempt to establish a community-based standard of practice for in situ SWC sensors so that future research and applications have consistent guidance on site selection, sensor installation, data interpretation, and long-term maintenance of monitoring stations., The videography focuses on a multi-agency consensus of best-practices and recommendations for the installation of in situ SWC sensors. This paper presents an overview of this protocol along with the various steps essential for high-quality and long-term SWC data collection. This protocol will be of use to scientists and engineers hoping to deploy a single station or an entire network.

Journal of Visualized Experiments↗

USGS2020

Effect of environmental factors on the movement of Rainbow Trout in the Deerfield Reservoir System

Spawning movements and the factors affecting those movements are often of interest to fisheries managers and biologists. The objective of this study was to examine the influence of environmental factors on the movements of an adfluvial Rainbow Trout Oncorhynchus mykiss population in the Black Hills, South Dakota. Three unique strains of hatchery-reared Rainbow Trout and resident Rainbow Trout were implanted with passive integrated transponder (PIT) tags and movements between Deerfield Reservoir and the Castle Creek tributary system were monitored from August, 2010-July, 2011. Initial adfluvial movements of Rainbow Trout were detected using a stationary PIT tag reader deployed near the mouth of Castle Creek. Multiple linear regressions were used to model the relationship between PIT tagged Rainbow Trout movement and water temperature, photoperiod, and discharge. Using Akaike’s information criterion (AIC) to compare models, discharge was the top supported model explaining variation in Rainbow Trout movement. Additionally, models containing temperature and photoperiod were also supported. Supported models only explained moderate levels of variation (<23%) in Rainbow Trout movement. Understanding how environmental variables affect the movement patterns of this unique population is essential in determining the proper management strategy for the Deerfield Reservoir system.

South Dakota↗

USGS2007

A watershed approach to ecosystem monitoring in Denali National Park and preserve, Alaska

The National Park Service and the National Biological Service initiated research in Denali National Park and Preserve, a 2.4 million-hectare park in southcentral Alaska, to develop ecological monitoring protocols for national parks in the Arctic/Subarctic biogeographic area. We are focusing pilot studies on design questions, on scaling issues and regionalization, ecosystem structure and function, indicator selection and evaluation, and monitoring technologies. Rock Creek, a headwater stream near Denali headquarters, is the ecological scale for initial testing of a watershed ecosystem approach. Our conceptual model embraces principles of the hydrological cycle, hypotheses of global climate change, and biological interactions of organisms occupying intermediate, but poorly studied, positions in Alaskan food webs. The field approach includes hydrological and depositional considerations and a suite of integrated measures linking key aquatic and terrestrial biota, environmental variables, or defined ecological processes, in order to establish ecological conditions and detect, track, and understand mechanisms of environmental change. Our sampling activities include corresponding measures of physical, chemical, and biological attributes in four Rock Creek habitats believed characteristic of the greater system diversity of Denali. This paper gives examples of data sets, program integration and scaling, and research needs.

Journal of the American Water Resources Associatio↗

USGS2022

Round Goby captured in a North American estuary: Status and implications in the Hudson River, New York

Round Goby Neogobius melanostomus , a nonnative fish species to North America, has been rapidly expanding through the connected waterways of the Laurentian Great Lakes. Herein, we document the eastward and southern expansion of Round Goby into the Hudson River, New York, an iconic coastal estuary that drains to Long Island Sound and the Atlantic seaboard. In summer and early fall 2021, routine fish monitoring conducted by the New York State Department of Environmental Conservation documented a population of Round Goby in the tidal portion of the Hudson River. Over the course of monitoring in 2021, personnel collected 112 Round Goby between Albany, New York, and Poughkeepsie, New York, with the southernmost collection occurring approximately 140 km downstream of invasion front as reported in 2020 within the New York State Canal System. Although Round Goby previously colonized large rivers and streams in the Great Lakes watershed, there is little information about the invasion success and ecological impacts of Round Goby in estuarine environments in North America. We discuss the distribution and biological characteristics of the Hudson River Round Goby population as well as the potential ecological implications and areas of future research and monitoring for this range expansion.

New York↗