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At least 127 records · Page 7Linked to original sources

Spatial and temporal interactions of sympatric mountain lions in Arizona

Spatial and temporal interactions among individual members of populations can have direct applications to habitat management of mountain lions ( Puma concolor ). Our objectives were to evaluate home range overlap and spatial/temporal use of overlap zones (OZ) of mountain lions in Arizona. We incorporated spatial data with genetic analyses to assess relatedness between mountain lions with overlapping home ranges. We recorded the space use patterns of 29 radio-collared mountain lions in Arizona from August 2005 to August 2008. We genotyped 28 mountain lions and estimated the degree of relatedness among individuals. For 26 pairs of temporally overlapping mountain lions, 18 overlapped spatially and temporally and eight had corresponding genetic information. Home range overlap ranged from 1.18% to 46.38% (x̄=2443, SE = 2.96). Male–male pairs were located within 1 km of each other on average, 0.04% of the time, whereas male–female pairs on average were 3.0%. Two male–male pairs exhibited symmetrical spatial avoidance and two symmetrical spatial attractions to the OZ. We observed simultaneous temporal attraction in three male–male pairs and four male–female pairs. Individuals from Tucson were slightly related to one another within the population ( n = 13, mean R = 0.0373 ± 0.0151) whereas lions from Payson ( n = 6, mean R = -0.0079 ± 0.0356) and Prescott ( n = 9, mean R = -0.0242 ± 0.0452) were not as related. Overall, males were less related to other males ( n = 20, mean R = -0.0495 ± 0.0161) than females were related to other females ( n = 8, mean R = 0.0015 ± 0.0839). Genetic distance was positively correlated with geographic distance ( r 2 = 0.22, P = 0.001). Spatial requirements and interactions influence social behavior and can play a role in determining population density.

Arizona

Geographic variation in band reporting rates for mallards based on reward banding

We conducted a reward band study on mallards ( Anas platyrhynchos ) to estimate and test hypotheses about sources of variation in band reporting rate. We banded 25,398 mallards with standard and 100 reward bands (3 mallards banded with standard bands for every reward-banded mallard) during preseason (Jul-Sep), 1988. We used a series of multinomial models to model the resulting 2,776 band recoveries from 1988 to 1991. Estimates of reporting rate for males shot in 10 harvest areas ranged from 0.29 to 0.46 and averaged 0.38 (SE = 0.020). We found evidence ( P < 0.01) of geographic variation in reporting rates, but not of smooth latitudinal or longitudinal gradients. There was evidence ( P = 0.07) of lower reporting rates for females than males, especially in prairie Canada and the Central Flyway. Except for young males in the northern Atlantic Flyway, estimated harvest rates were lower than historical estimates, as expected from recent restrictive hunting regulations. Patterns of geographic and agesex variation in harvest rates were similar to those obtained using historical band-recovery data.

Journal of Wildlife Management

Recreation economics to inform migratory species conservation: Case study of the northern pintail

Quantification of the economic value provided by migratory species can aid in targeting management efforts and funding to locations yielding the greatest benefits to society and species conservation. Here we illustrate a key step in this process by estimating hunting and birding values of the northern pintail ( Anas acuta ) within primary breeding and wintering habitats used during the species’ annual migratory cycle in North America. We used published information on user expenditures and net economic values (consumer surplus) for recreational viewing and hunting to determine the economic value of pintail-based recreation in three primary breeding areas and two primary wintering areas. Summed expenditures and consumer surplus for northern pintail viewing were annually valued at \$70M, and annual sport hunting totaled \$31M (2014 USD). Expenditures for viewing (\$42M) were more than twice as high than those for hunting (\$18M). Estimates of consumer surplus, defined as the amount consumers are willing to pay above their current expenditures, were $15M greater for viewing (\$28M) than for hunting (\$13M). We discovered substantial annual consumer surplus (\$41M) available for pintail conservation from birders and hunters. We also found spatial differences in economic value among the primary regions used by pintails, with viewing generally valued more in breeding regions than in wintering regions and the reverse being true for hunting. The economic value of pintail-based recreation in the Western wintering region (\$26M) exceeded that in any other region by at least a factor of three. Our approach of developing regionally explicit economic values can be extended to other taxonomic groups, and is particularly suitable for migratory game birds because of the availability of large amounts of data. When combined with habitat-linked population models, regionally explicit values could inform development of more effective conservation finance and policy mechanisms to enhance environmental management and societal benefits across the geographically dispersed areas used by migratory species.

Journal of Environmental Management

Mixed stock analysis of Lake Michigan's Lake Whitefish Coregonus clupeaformis commercial fishery

Lake whitefish ( Coregonus clupeaformis ) support the primary commercial fishery in Lake Michigan. Discrete genetic stocks of lake whitefish have been identified and tagging data suggest stocks are mixed throughout much of the year. Our objectives were to determine if (1) differential stock harvest occurs in the commercial catch, (2) spatial differences in genetic composition of harvested fish were present, and (3) seasonal differences were present in the harvest by commercial fisheries that operate in management zones WI-2 and WFM-01 (Green Bay, Lake Michigan). Mixed stock analysis was conducted on 17 commercial harvest samples (n = 78–145/sample) collected from various ports lake-wide during 2009–2010. Results showed significant mixing with variability in stock composition across most samples. Samples consisted of two to four genetic stocks each accounting for ≥ 10% the catch. In 10 of 17 samples, the stock contributing the largest proportion made up < 60% of the harvest. In general, seasonal and annual differences existed in the proportional stock contribution at a single capture location. Samples from Wisconsin's primary commercial fishing management zone (WI-2) were composed predominately of fish from the Big Bay de Noc (Michigan) stock as opposed to the geographically proximate, North–Moonlight Bay (Wisconsin) stock. These findings have implications for management and allocation of fish to various quotas. Specifically, geographic location of harvest, the current means of allocating harvest quotas, is not the best predictor of genetic stock harvest.

Lake Michigan

BbsAssistant: An R package for downloading and handling data and information from the North American Breeding Bird Survey

This R package contains functions for downloading and munging data from the U.S. Geological Surveys North American Breeding Bird Survey (BBS) via file transfer protocol (FTP) (Pardieck, Ziolkowski Jr, Lutmerding, & Hudson, 2018; J. R. Sauer et al., 2017). This package was created to allow the user to bulk-download the BBS point count and related (e.g., route-level conditions) via FTP, and to quickly subset the data by taxonomic classifications and/or geographical locations. This package also maintains data containing the trend and annual indices from the most recent (1996-2017) hierarchical population analyses (J. Sauer et al., 2017).

Journal of Open Source Software

Cost-effectiveness analysis of sandhill crane habitat management

Invasive species often threaten native wildlife populations and strain the budgets of agencies charged with wildlife management. We demonstrate the potential of cost-effectiveness analysis to improve the efficiency and value of efforts to enhance sandhill crane ( Grus canadensis ) roosting habitat. We focus on the central Platte River in Nebraska (USA), a region of international ecological importance for migrating avian species including sandhill cranes. Cost-effectiveness analysis is a valuation process designed to compare alternative actions based on the cost of achieving a pre-determined objective. We estimated costs for removal of invasive vegetation using geographic information system simulations and calculated benefits as the increase in area of sandhill crane roosting habitat. We generated cost effectiveness values for removing invasive vegetation on 7 land parcels and for the entire central Platte River to compare the cost-effectiveness of management at specific sites and for the central Platte River landscape. Median cost effectiveness values for the 7 land parcels evaluated suggest that costs for creating 1 additional hectare of sandhill crane roosting habitat totaled US $1,595. By contrast, we found that creating an additional hectare of sandhill crane roosting habitat could cost as much as US $12,010 for some areas in the central Platte River, indicating substantial cost savings can be achieved by using a cost effectiveness analysis to target specific land parcels for management. Cost-effectiveness analysis, used in conjunction with geographic information systems, can provide decision-makers with a new tool for identifying the most economically efficient allocation of resources to achieve habitat management goals.

Nebraska

A study of the distribution of the polychlorinated biphenyls in the aquatic environment

Data gathered from monitoring activities and project studies indicate the ubiquitous occurrence and distribution of polychlorinated biphenyls in the aquatic environment. Residues have been detected in samples from 19 States, representing nearly every region of the country. Concentrations ranged from 0.1 to 4.0 ug/l in unfiltered water samples and 5.0 to 3,200 ug/kg in bottom sediments. PCB residues were also found in fish and aquatic plants. Samples were prepared by the same techniques used for general chlorinated insecticide detection, with special attention to cleanup and separation of PCB's from other compounds. Basic identification and quantification were made by dual-column electron-capture gas chromatography and confirmed by gas chromatography mass spectrometry whenever possible. The sampling program is expected to be broadened geographically in 1973 and increased in successive years in order to more adequately define the distribution of PCB residues in the major drainage basins of the United States.

Journal of Research of the U.S. Geological Survey

Distribution and winter survival health of Asian clams, Corbicula fluminea, in the St. Clair River, Michigan

We studied the distribution and winter survival of the Asian clam, Corbicula fluminea, in the St. Clair River from the fall of 1988 to the spring of 1990. Between fall of 1988 and spring of 1989, distribution of Corbicula was extended from 5.5 to 11.5 km downstream from an electric power plant. However, total abundance of clams decreased during the winter. By fall of 1989, Corbicula was found 14.5 km from the power plant, and the mean density of clams was 27 individuals/m 2 . Between fall of 1989 and spring of 1990, distribution was reduced to 7.5 km from the power plant and abundance decreased 97%. During the winter of 1988-1989, we collected clams monthly from one station 2.2 km from the power plant, and we observed that clams survived the harsh winter for two months after the water temperature dropped about 1.5&deg;C below the reported lethal level for Corbicula in midwinter. During the winer of 1989-1990, we held clams at the sediment-water interface in enclosures, and we observed that condition indices (dry body weight; dry shell weight) of clams remained stable (mean = 0.05 &plusmn; 0.01) in December and January and then declined significantly (p < 0.05) to 0.04 &plusmn; 0.01 in February. All clams perished by late March. The deteriorating physiological state of clams, as indicated by declining condition index, seemingly is a factor in late winter mortalities of Corbicula in the St. Clair River. In contrast to the rapid geographic spread and population increases in the southern United States, Corbicula likely will not spread rapidly throughout the Great Lakes beyond shoreline thermal refugia of heated-water discharge plumes from power plants.

Michigan

Mineral Commodity Summaries 2008

Each chapter of the 2008 edition of the U.S. Geological Survey (USGS) Mineral Commodity Summaries (MCS) includes information on events, trends, and issues for each mineral commodity as well as discussions and tabular presentations on domestic industry structure, Government programs, tariffs, 5-year salient statistics, and world production and resources. The MCS is the earliest comprehensive source of 2007 mineral production data for the world. More than 90 individual minerals and materials are covered by two-page synopses. National reserves and reserve base information for most mineral commodities found in this report, including those for the United States, are derived from a variety of sources. The ideal source of such information would be comprehensive evaluations that apply the same criteria to deposits in different geographic areas and report the results by country. In the absence of such evaluations, national reserves and reserve base estimates compiled by countries for selected mineral commodities are a primary source of national reserves and reserve base information. Lacking national assessment information by governments, sources such as academic articles, company reports, common business practice, presentations by company representatives, and trade journal articles, or a combination of these, serve as the basis for national reserves and reserve base information reported in the mineral commodity sections of this publication. A national estimate may be assembled from the following: historically reported reserves and reserve base information carried for years without alteration because no new information is available; historically reported reserves and reserve base reduced by the amount of historical production; and company reported reserves. International minerals availability studies conducted by the U.S. Bureau of Mines, before 1996, and estimates of identified resources by an international collaborative effort (the International Strategic Minerals Inventory) are the basis for some reserves and reserve base estimates. The USGS collects information about the quantity and quality of mineral resources but does not directly measure reserves, and companies or governments do not directly report reserves or reserve base to the USGS. Reassessment of reserves and reserve base is a continuing process and the intensity of this process differs for mineral commodities, countries, and time period. Abbreviations and units of measure, and definitions of selected terms used in the report, are in Appendix A and Appendix B, respectively. A resource/reserve classification for minerals, based on USGS Circular 831 (published with the U.S. Bureau of Mines) is Appendix C, and a directory of USGS minerals information country specialists and their responsibilities is Appendix D. The USGS continually strives to improve the value of its publications to users. Constructive comments and suggestions by readers of the MCS 2008 are welcomed.

Mineral Commodity Summaries

Mineral Commodity Summaries 2009

Each chapter of the 2009 edition of the U.S. Geological Survey (USGS) Mineral Commodity Summaries (MCS) includes information on events, trends, and issues for each mineral commodity as well as discussions and tabular presentations on domestic industry structure, Government programs, tariffs, 5-year salient statistics, and world production and resources. The MCS is the earliest comprehensive source of 2008 mineral production data for the world. More than 90 individual minerals and materials are covered by two-page synopses. For mineral commodities for which there is a Government stockpile, detailed information concerning the stockpile status is included in the two-page synopsis. Because specific information concerning committed inventory was no longer available from the Defense Logistics Agency, National Defense Stockpile Center, that information, which was included in earlier Mineral Commodity Summaries publications, has been deleted from Mineral Commodity Summaries 2009. National reserves and reserve base information for most mineral commodities found in this report, including those for the United States, are derived from a variety of sources. The ideal source of such information would be comprehensive evaluations that apply the same criteria to deposits in different geographic areas and report the results by country. In the absence of such evaluations, national reserves and reserve base estimates compiled by countries for selected mineral commodities are a primary source of national reserves and reserve base information. Lacking national assessment information by governments, sources such as academic articles, company reports, common business practice, presentations by company representatives, and trade journal articles, or a combination of these, serve as the basis for national reserves and reserve base information reported in the mineral commodity sections of this publication. A national estimate may be assembled from the following: historically reported reserves and reserve base information carried for years without alteration because no new information is available; historically reported reserves and reserve base reduced by the amount of historical production; and company reported reserves. International minerals availability studies conducted by the U.S. Bureau of Mines, before 1996, and estimates of identified resources by an international collaborative effort (the International Strategic Minerals Inventory) are the basis for some reserves and reserve base estimates. The USGS collects information about the quantity and quality of mineral resources but does not directly measure reserves, and companies or governments do not directly report reserves or reserve base to the USGS. Reassessment of reserves and reserve base is a continuing process, and the intensity of this process differs for mineral commodities, countries, and time period. Abbreviations and units of measure, and definitions of selected terms used in the report, are in Appendix A and Appendix B, respectively. A resource/reserve classification for minerals, based on USGS Circular 831 (published with the U.S. Bureau of Mines) is Appendix C, and a directory of USGS minerals information country specialists and their responsibilities is Appendix D. The USGS continually strives to improve the value of its publications to users. Constructive comments and suggestions by readers of the MCS 2009 are welcomed.

Mineral Commodity Summaries

Simulation modeling to explore the effects of length-based harvest regulations for Ictalurus fisheries

Management of Blue Catfish Ictalurus furcatus and Channel Catfish I. punctatus for trophy production has recently become more common. Typically, trophy management is attempted with length-based regulations that allow for the moderate harvest of small fish but restrict the harvest of larger fish. However, the specific regulations used vary considerably across populations, and no modeling efforts have evaluated their effectiveness. We used simulation modeling to compare total yield, trophy biomass ( B trophy ), and sustainability (spawning potential ratio [SPR] > 0.30) of Blue Catfish and Channel Catfish populations under three scenarios: (1) current regulation (typically a length-based trophy regulation), (2) the best-performing minimum length regulation (MLR best ), and (3) the best-performing length-based trophy catfish regulation (LTR best ; “best performing” was defined as the regulation that maximized yield, B trophy , and sustainability). The B trophy produced did not differ among the three scenarios. For each fishery, the MLR best and LTR best produced greater yield (>22% more) than the current regulation and maintained sustainability at higher finite exploitation rates (>0.30) than the current regulation. The MLR best and LTR best produced similar yields and SPRs for Channel Catfish and similar yields for Blue Catfish; however, the MLR best for Blue Catfish produced more resilient fisheries (higher SPR) than the LTR best . Overall, the variation in yield, B trophy , and SPR among populations was greater than the variation among regulations applied to any given population, suggesting that population-specific regulations may be preferable to regulations applied to geographic regions. We conclude that LTRs are useful for improving catfish yield and maintaining sustainability without overly restricting harvest but are not effective at increasing the B trophy of catfish.

North American Journal of Fisheries Management

Fluid spatial dynamics of West Nile virus in the USA: Rapid spread in a permissive host environment

The introduction of West Nile virus (WNV) into North America in 1999 is a classical example of viral emergence in a new environment, with its subsequent dispersion across the continent having a major impact on local bird populations. Despite the importance of this epizootic, the pattern, dynamics and determinants of WNV spread in its natural hosts remain uncertain. In particular, it is unclear whether the virus encountered major barriers to transmission, or spread in an unconstrained manner, and if specific viral lineages were favored over others indicative of intrinsic differences in fitness. To address these key questions in WNV evolution and ecology we sequenced the complete genomes of approximately 300 avian isolates sampled across the USA between 2001-2012. Phylogenetic analysis revealed a relatively &lsquo;star-like' tree structure, indicative of explosive viral spread in US, although with some replacement of viral genotypes through time. These data are striking in that viral sequences exhibit relatively limited clustering according to geographic region, particularly for those viruses sampled from birds, and no strong phylogenetic association with well sampled avian species. The genome sequence data analysed here also contain relatively little evidence for adaptive evolution, particularly on structural proteins, suggesting that most viral lineages are of similar fitness, and that WNV is well adapted to the ecology of mosquito vectors and diverse avian hosts in the USA. In sum, the molecular evolution of WNV in North America depicts a largely unfettered expansion within a permissive host and geographic population with little evidence of major adaptive barriers.

Journal of Virology

Reference intervals and physiologic alterations in hematologic and biochemical values of free-ranging desert tortoises in the Mojave Desert

Desert tortoise ( Gopherus agassizii ) populations have experienced precipitous declines resulting from the cumulative impact of habitat loss, and human and disease-related mortality. Evaluation of hematologic and biochemical responses of desert tortoises to physiologic and environmental factors can facilitate the assessment of stress and disease in tortoises and contribute to management decisions and population recovery. The goal of this study was to obtain and analyze clinical laboratory data from free-ranging desert tortoises at three sites in the Mojave Desert (California, USA) between October 1990 and October 1995, to establish reference intervals, and to develop guidelines for the interpretation of laboratory data under a variety of environmental and physiologic conditions. Body weight, carapace length, and venous blood samples for a complete blood count and clinical chemistry profile were obtained from 98 clinically healthy adult desert tortoises of both sexes at the Desert Tortoise Research Natural area (western Mojave), Goffs (eastern Mojave) and Ivanpah Valley (northeastern Mojave). Samples were obtained four times per year, in winter (February/March), spring (May/June), summer (July/August), and fall (October). Years of near-, above- and below-average rainfall were represented in the 5 yr period. Minimum, maximum and median values, and central 95 percentiles were used as reference intervals and measures of central tendency for tortoises at each site and/or season. Data were analyzed using repeated measures analysis of variance for significant ( P < 0.01) variation on the basis of sex, site, season, and interactions between these variables. Significant sex differences were observed for packed cell volume, hemoglobin concentration, aspartate transaminase activity, and cholesterol, triglyceride, calcium, and phosphorus concentrations. Marked seasonal variation was observed in most parameters in conjunction with reproductive cycle, hibernation, or seasonal rainfall. Year-to-year differences and long-term alterations primarily reflected winter rainfall amounts. Site differences were minimal, and largely reflected geographic differences in precipitation patterns, such that results from these studies can be applied to other tortoise populations in environments with known rainfall and forage availability patterns.

Journal of Wildlife Diseases

Parasites and commensals of the West Indian manatee from Puerto Rico

Metazoan parasites and commensals were collected from dead manatees salvaged in Puerto Rico. Thirty-five manatees were examined between 1980 and 1998. Parasites and commensals were identified in 20 (57%) manatees and included 3 species of helminths, 1 nematode (Heterocheilus tunicatus) and 2 digeneans (Chiorchis fabaceus and Cochleotrema cochleotrema). Two species of commensals were also associated with manatees: a barnacle (Chelonibia manati) and a fish (whitefin remora, Echeneis neucratoides). The 3 species of helminths found in manatees constitute the first records of these parasite-host relationships for the study area. The record of C. manati is the first for the Caribbean, and thus the species is not endemic to the Gulf of Mexico as previously described. The speculation that West Indian manatees closer to the center of their geographic distribution would have a greater diversity of parasites was found not true for these insular specimens but perhaps could be true for continental South American specimens.

Journal of the Helminthological Society of Washing

Identifying dominant controls on hydrologic parameter transfer from gauged to ungauged catchments: a comparative hydrology approach

Daily streamflow information is critical for solving various hydrologic problems, though observations of continuous streamflow for model calibration are available at only a small fraction of the world’s rivers. One approach to estimate daily streamflow at an ungauged location is to transfer rainfall–runoff model parameters calibrated at a gauged (donor) catchment to an ungauged (receiver) catchment of interest. Central to this approach is the selection of a hydrologically similar donor. No single metric or set of metrics of hydrologic similarity have been demonstrated to consistently select a suitable donor catchment. We design an experiment to diagnose the dominant controls on successful hydrologic model parameter transfer. We calibrate a lumped rainfall–runoff model to 83 stream gauges across the United States. All locations are USGS reference gauges with minimal human influence. Parameter sets from the calibrated models are then transferred to each of the other catchments and the performance of the transferred parameters is assessed. This transfer experiment is carried out both at the scale of the entire US and then for six geographic regions. We use classification and regression tree (CART) analysis to determine the relationship between catchment similarity and performance of transferred parameters. Similarity is defined using physical/climatic catchment characteristics, as well as streamflow response characteristics (signatures such as baseflow index and runoff ratio). Across the entire US, successful parameter transfer is governed by similarity in elevation and climate, and high similarity in streamflow signatures. Controls vary for different geographic regions though. Geology followed by drainage, topography and climate constitute the dominant similarity metrics in forested eastern mountains and plateaus, whereas agricultural land use relates most strongly with successful parameter transfer in the humid plains.

Journal of Hydrology

Comparison of in vitro growth characteristics of ten isolates of infectious hematopoietic necrosis virus

Ten isolates of infectious haematopoietic necrosis from salmonid fishes of different locations on the West Coast of North America from California to Alaska were compared by plaque size, single-step growth curves at 15 and 18 °C, rate of appearance of cytopathic effects in cell cultures, and growth over a range of temperatures. All isolates were distinguishable on the basis of each growth characteristic examined. The CO isolate from the Sacramento River drainage of California was the most singular of the 10 because of its diminutive plaque size and sensitivity to slightly elevated temperatures. The mean plaque diameter of the l0 isolates increased as the latitude of the geographic source of the isolate increased. Although the maximum titre obtained by all isolates was depressed at temperatures above approximately 18 °C, half of the isolates were not inhibited by temperatures as low as 0.5 °C. t.

Journal of General Virology

Karyotypic analyses of twenty-one species of molossid bats (Molossidae: Chiroptera)

Examination of 135 specimens representing 21 species from seven genera of the family Molossidae revealed diploid numbers ranging from 34 to 48. Seventeen species from six genera have diploid numbers of 48. Geographic variation and polymorphism were found only in Eumops glaucinus . Chromosomal variation within the family is presumed to be primarily due to changes in diploid number resulting from Robertsonian translocations.

Canadian Journal of Genetics and Cytology

Setting and tracking suppression targets for sea lampreys in the Great Lakes

In response to invasive species, the course of action taken by management agencies often evolves over a range of options from a do-nothing approach to suppression to complete eradication. As a case study of suppression targets, we explore the history of approaches used by the Great Lakes Fishery Commission in response to the invasion of the Laurentian Great Lakes by sea lampreys ( Petromyzon marinus ). With the early realization that eradication was not possible using available techniques, focus shifted to suppression of sea lampreys to support fish community objectives for the lakes. As a surrogate for damage to the fishery, a suppression target was defined for the maximum acceptable marking rate, indicated by the average number of sea lamprey wounds observed on every 100 large lake trout ( Salvelinus namaycush ) surveyed. Historic marking rates were used to delineate time periods of acceptable sea lamprey predation levels as an approximate measure of sea lamprey-induced mortality. A second target, independent of lake trout population status, was based on the average sea lamprey abundance estimated during the specified time periods. These intuitive targets have served as suppression benchmarks for the Sea Lamprey Control Program in the Great Lakes, allowing decision makers to gauge progress towards targets, refine control strategies and prioritize geographic areas for increased control effort. Here we document the development and subsequent changes to targets, summarize the methods used to implement these changes, and provide considerations for the future.

Great Lakes