Physical, chemical, and biological data associated with irrigation drainage in the Freezeout Lake area, west-central Montana, 1994-95
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Open-File Report↗
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Results for “Biology Open”
Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.
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Carbon budgets of biological soil crusts at micro-, meso-, and global scales
The importance of biocrusts in the ecology of arid lands across all continents is widely recognized. In spite of this broad distribution, contributions of biocrusts to the global biogeochemical cycles have only recently been considered. While these studies opened a new view on the global role of biocrusts, they also clearly revealed the lack of data for many habitats and of overall standards for measurements and analysis. In order to understand carbon cycling in biocrusts and the progress which has been made during the last 15 years, we offer a multi-scale approach covering different climatic regions. We also include a discussion on available measurement techniques at each scale: A micro-scale section focuses on the individual organism level, including modeling based on the combination of field and lab data. The meso-scale section addresses the CO2 exchange of a complete ecosystem or at the community level. Finally, we consider the contribution of biocrusts at a global scale, giving a general perspective of the most relevant findings regarding the role of biological soil crusts in the global terrestrial carbon cycle.
Book chapter↗
An overview of raptor biology and conservation in Latin America
Prior to the last decade, biological studies of raptorial birds in Latin America were, with a few exceptions, nonexistent. For many species all that was known was the general range and habitat type. While the logistical and political challenges are still present, the last few years has seen the opening of a door to what will almost surely be a flood of scientific investigations. From over 40,000 ground miles traveled in 16 countries, field contact with over two thirds of the raptor species, and interviews with conservation officers in 10 nations, I will report on some raptor concentration areas, identify topics for future research, and generalize on raptor conservation issues. I will also briefly mention some recent biological studies and touch briefly on the challenges awaiting the biologist who tries his or her hand at reaping the rewards that are present in abundance for those who engage in raptor studies in Latin America.
Book chapter↗
Evaluation of biological data, Guanella Pass Area, Clear Creek and Park Counties, Colorado, water years 1995-97
Macroinvertebrate and algal community samples were collected during a 3-year period at sites located near Guanella Pass, Colorado, to provide baseline characterization data. Water-quality sampling and habitat evaluations were used to aid in the interpretation of the biological data. The study was part of an environmental investigation for a proposed roadway reconstruction project on Guanella Pass. Discharge was strongly affected by snowmelt during May–July. Habitat scores were optimal (147–199), as determined by U.S. Environmental Protection Agency Rapid Bioassessment Protocol methods. Generally, low median concentrations of nitrogen and phosphorus (less than 0.02 milligram per liter) were detected at all sites. The water temperatures ranged from 0.4 to 11.2 degrees Celsius. The average pH for all sites was neutral, and specific conductivities were dilute (less than 160 microsiemens per centimeter at 25 degrees Celsius). The median suspended-sediment concentration was less than 20 milligrams per liter at all sites. During the study, 100 macroinvertebrate taxa were identified. The dominant taxonomic groups of macroinvertebrates were Diptera (true flies), Ephemeroptera (mayflies), Plecoptera (stoneflies), and Trichoptera (caddisflies). Macroinvertebrate density ranged from 6.6 to 4,300 organisms per square meter at sampled sites. Shannon-Weaver diversity values for the macroinvertebrate samples ranged from 1.6 to 4.5. Collector-gatherers dominated the functional feeding groups at most sites. Average abundance of Ephemeroptera, Plecoptera, and Trichoptera (EPT) was 56.7 percent; EPT:Chironomidae ratios were greater than 2:1 for every site except during water years 1996 and 1997. Chironomids were greater than EPT at four sites in water year 1996 and at one site in water year 1997. The percentage of macroinvertebrate community similarity between site pairs varied from 0 to 80 percent. The number of algal taxa identified was 280. The dominant algal divisions, in terms of density, were Cyanophyta (blue-green algae), Chrysophyta (diatoms), Chlorophyta (green algae), Rhodophyta (red algae), and Euglenophyta (euglenoids). In general, diatom biovolumes dominated the algal assemblage, followed by blue-green algae, green algae, red algae, and euglenoids. Algal densities ranged from 3.1 X 10 2 to more than 4.7 X 10 6 cells per square centimeter, and algal biovolume ranged from 2.3 X 10 4 to 4.6 X 10 9 cells per cubic centimeter. Diversity values for diatoms ranged from 1.5 to 4.9. The pollution tolerance index (PTI) for diatoms ranged from 1.8 to 3.0. Sensitive diatoms were present at each site and ranged from 21 to 97 percent. The percentage of motile diatoms ranged from 0 to 13 percent. The presence of acid-tolerant diatoms ranged from less than 0.5 to greater than 20 percent. The percentage of community similarity between site pairs ranged from 1 to 97 percent. Overall, the biotic metrics that were evaluated during this study indicate that the macroinvertebrate and algal communities in the streams on Guanella Pass are not degraded by the existing road. Erosion may cause some localized effects but may not affect the overall health of the whole stream system. The degraded condition of Geneva Creek probably is due to natural effects as opposed to road effects. Although upper South Clear Creek, upstream from Naylor Creek, is located downstream from several sources of road runoff, the biological community at this site does not seem to be negatively affected.
Colorado↗
Hydrographic, biological, and nutrient properties of Tomales Bay, California, March 1985 to May 1986
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Open-File Report↗
The importance of forests in bumble bee biology and conservation
Declines of many bumble bee species have raised concerns because of their importance as pollinators and potential harbingers of declines among other insect taxa. At present, bumble bee conservation is predominantly focused on midsummer flower restoration in open habitats. However, a growing body of evidence suggests that forests may play an important role in bumble bee life history. Compared with open habitats, forests and woody edges provide food resources during phenologically distinct periods, are often preferred nesting and overwintering habitats, and can offer favorable abiotic conditions in a changing climate. Future research efforts are needed in order to anticipate how ongoing changes in forests, such as overbrowsing by deer, plant invasions, and shifting canopy demographics, affect the suitability of these habitats for bumble bees. Forested habitats are increasingly appreciated in the life cycles of many bumble bees, and they deserve greater attention from those who wish to understand bumble bee populations and aid in their conservation.
BioScience↗
Characterization of deep-sea coral and sponge communities in Greater Farallones National Marine Sanctuary: Point Arena South Essential Fish Habitat Conservation Area and New Amendment 28 Areas
This report summarizes samples collected during a remotely operated vehicle (ROV) cruise conducted in October 2019 on board E/V Nautilus. Areas sampled in Greater Farallones National Marine Sanctuary included areas proposed for fisheries management zoning in the Point Arena South (PAS) Essential Fish Habitat Conservation Area (EFH). Dive planning targeted habitats and biological communities of corals, sponges, and fishes in relation to the new, 2020 configuration of PAS EFH (hereafter referred to as PAS), which includes areas once closed to commercial bottom trawling and now opened to bottom trawling, once opened to bottom trawling and now closed, or that remain closed to commercial bottom trawling. Particular interest was given to enumerating deep-sea corals and sponges (DSCS) in these areas as they are long-lived, slow-growing species that are vulnerable to impacts from bottom trawling. Fish species were also enumerated. These data provide the most recent assessment and characterization for a portion of these areas before the final ruling on Amendment 28 went into effect on January 1, 2020 (50 C.F.R. part 660). A total of seven sponge specimens were collected on this mission, some of which could potentially be new species, such as the large yellow ‘plate’-shaped sponge and the ‘palm frond’ morphology of the predatory sponge Asbestopluma , documented on both dives. Six coral collections were made, including three types of red Swiftia sp. gorgonians (two had fan-shaped morphology and one had branched morphology) with different polyp colors. A high diversity of fishes, particularly groundfish, were documented across the entire PAS area. The findings from this cruise will be provided to NOAA’s National Marine Fisheries Service to help them identify biologically complex areas of the seafloor that are most sensitive to bottom trawling and aid in the ongoing management of this designated essential fish habitat conservation zone. Habitat data from these surveys will be used to confirm substrate prediction models that can be used to predict DSCS habitats where there is a dearth of visual observations.
California↗
Selected water-quality data from Fallen Leaf Lake, El Dorado County, California, June through October 1974
In 1974 the U.S. Geological Survey entered into a cooperative agreement with the California Department of Water Resources to study the limnology of Fallen Leaf Lake and adjacent streams. The lake is in California, near the crest of the Sierra Nevada about 23 miles southwest of Reno, Nevada (fig. 1). The study was undertaken to help develop a better understanding of selected characteristics of a high-altitude dilute-solution lake-stream system and the effect of man on the system. Fallen Leaf Lake and the adjacent streams were chosen for the study because the lake represents an alpine system in a basin that has had limited development for a number of years. Recently, local and state groups have become extremely interested in the effects of man's activities on the condition of the lake. The study was designed to: 1. Provide data on selected physical, chemical, and biological characteristics of Fallen Leaf Lake and adjacent streams, 2. Determine whether the magnitude and changes in magnitude of a number of physical, chemical, and biological variables are affected by natural or cultural processes, 3. Characterize a high-altitude, dilute-solution aquatic ecosystem, 4. Compare and contrast the physical, chemical, and biological characteristics of Fallen Leaf Lake and adjacent streams with other lakes in the area.
California↗
Fort Collins Science Center - Fiscal Year 2008 Science Accomplishments
Public land and natural resource managers in the United States are confronted with increasingly complex decisions that have important ramifications for both ecological and human systems. The scientists and technical professionals at the U.S. Geological Survey (USGS) Fort Collins Science Center (FORT) contribute a unique blend of ecological, socioeconomic, and technological expertise to investigating complicated ecological problems that address critical management questions. In Fiscal Year 2008 (FY08), FORT's scientific and technical professionals continued research vital to the science and management needs of U.S. Department of the Interior agencies and other entities. This annual report describes select FY08 accomplishments in research and technical assistance involving biological information management and delivery; aquatic, riparian, and managed-river ecosystems; invasive species; status and trends of biological resources (including human dimensions and social science); terrestrial ecosystems; and fish and wildlife resources.
Open-File Report↗
Biological premonitors of earthquakes: A validation study
For the greatest ultimate usefulness to society, the two most important facets of earthquake prediction are (1) a fundamental scientific understanding of the earthquake-triggering process and (2) the identification of reliable and measurable premonitors. A possible approach to both of these problem areas, and one that has received almost no systematic attention in U.S. seismological studies, is to examine the supposed sensitivity of biological organisms to one or more of the geophysical changes that precede earthquakes.
Open-File Report↗
Hydrogeologic, water-quality, streamflow, bottom-sediment analyses, and biological data near the Wayne County landfill, Wayne County, Tennessee
This report summarizes the data collected as part of a hydrogeologic investigation to determine the effects of the Wayne County landfill on local water quality. The investigation was conducted from 1988 through 1989 by the U.S. Geological Survey in cooperation with the Tennessee Department of Health and Environment, Division of Superfund. The landfill was closed in November 1984 after allegations that contaminants from the landfill were affecting the quality of water from domestic wells in the Banjo Branch-Hardin Hollow valley. Test well construction data; water-quality data for selected wells, seeps, and surface-water sites: streamflow data from Banjo Branch; analyses of bottom-sediment samples: and biological data for the study area are documented in this report.
Tennessee↗
Response of Halimeda to ocean acidification: Field and laboratory evidence
Rising atmospheric pCO 2 levels are changing ocean chemistry more dramatically now than in the last 20 million years. In fact, pHvalues of the open ocean have decreased by 0.1 since the 1800s and are predicted to decrease 0.1-0.4 globally in the next 90 years. Ocean acidification will affect fundamental geochemical and biological processes including calcification and carbonate sediment production. The west Florida shelf is a natural laboratory to examine the effects of ocean acidification on aragonite production by calcareous green algae. Scanning electron microscopy (SEM) of crystal morphology of calcifying organisms reveals ultrastructural details of calcification that occurred at different saturation states. Comparison of archived and recent specimens of calcareous green alga Halimeda spp. from the west Florida shelf, demonstrates crystal changes in shape and abundance over a 40+ year time span. Halimeda crystal data from apical sections indicate that increases in crystal concentration and decreases in crystal width occurred over the last 40+ years. Laboratory experiments using living specimens of Halimeda grown in environments with known pH values were used to constrain historical observations. Percentages of organic and inorganic carbon per sample weight of pooled species did not significantly change. However, individual species showed decreased inorganic carbon and increased organic carbon in more recent samples, although the sample sizes were limited. These results indicate that the effect of increased pCO 2 and decreased pH on calcification is reflected in the crystal morphology of this organism. More data are needed to confirm the observed changes in mass of crystal and organic carbon. ?? Author(s) 2009.
Biogeosciences Discussions↗
Evaluation of aquatic biota in relation to environmental characteristics measured at multiple scales in agricultural streams of the Midwest: 1993-2004
This study evaluated the relations between algal, invertebrate, and fish assemblages and physical environmental characteristics of streams at the reach, segment, and watershed scale in agricultural settings in the Midwest. The 86 stream sites selected for study were in predominantly agricultural watersheds sampled as part of the U.S. Geological Survey's National Water-Quality Assessment Program. Species abundance and over 130 biological metrics were used to determine which aspects of the assemblages were most sensitive to change at the three spatial scales. Digital orthophotograph-based riparian land use/land cover was used for analyses of riparian conditions at the reach and segment scales. The percentage area of different land-use/land-cover types was also determined for each watershed. Out of over 230 environmental characteristics examined, those that best explained variation in the biotic assemblages at each spatial scale include the following: 1) reach: bank vegetative cover, fine silty substrate, and open canopy angle; 2) segment: woody vegetation and cropland in the 250-m riparian buffer, and average length of undisturbed buffer; and 3) watershed: land use/land cover (both total forested and row crop), low-permeability soils, slope, drainage area, and latitude. All three biological assemblages, especially fish, correlated more with land use/land cover and other physical characteristics at the watershed scale than at the reach or segment scales. This study identifies biotic measures that can be used to evaluate potential improvements resulting from agricultural best-management practices and other conservation efforts, as well as evaluate potential impairment from urban development or other disturbances.
Midwest↗
Some hydrologic & biologic aspects of the Big Cypress Swamp drainage area, southern Florida 1970
No abstract available.
Florida↗
Preliminary geologic map of the Laredo, Crystal City–Eagle Pass, San Antonio, and Del Rio 1° x 2° quadrangles, Texas, and the Nuevo Laredo, Ciudad Acuña, Piedras Negras, and Nueva Rosita 1° x 2° quadrangles, Mexico
The purpose of this map is to provide an integrated, bi-national geologic map dataset for display and analyses on an Arc Internet Map Service (IMS) dedicated to environmental health studies in the United States-Mexico border region. The IMS web site was designed by the US-Mexico Border Environmental Health Initiative project and collaborators, and the IMS and project web site address is http://borderhealth.cr.usgs.gov/. The objective of the project is to acquire, evaluate, analyze, and provide earth, biologic, and human health resources data within a GIS framework (IMS) to further our understanding of possible linkages between the physical environment and public health issues. The geologic map dataset is just one of many datasets included in the web site; other datasets include biologic, hydrologic, geographic, and human health themes.
Laredo, Crystal City–Eagle Pass, San Antonio, and ↗
Efficacy of Pseudomonas fluorescens strain CL145A spray dried powder for controlling zebra mussels adhering to native unionid mussels within field enclosures
The efficacy of a commercially prepared spray dried powder (SDP) formulation of Pseudomonas fluorescens (strain CL145A) was evaluated for removing zebra mussels ( Dreissena polymorpha ) adhering to a population of unionid mussels in Lake Darling (Alexandria, Minnesota). Two groups of unionid mussels were used in the study. Unionid mussels were collected near the test area, weighed, photographed, individually tagged, and randomly allocated to one of nine test enclosures in equal proportions and then divided into two groups. The first group of unionid mussels (Group 1, n = 5 per test enclosure) were indiscriminately selected from each test enclosure and used to estimate the number of zebra mussels adhering to unionid mussels prior to exposure. The second group of unionid mussels (Group 2, n = 22 per test enclosure) were used to evaluate the efficacy of SDP for removal of adhering zebra mussels. Both Group 1 and Group 2 mussels were used to evaluate the effects of SDP exposure on unionid mussel survival. Treatment was assigned to each test enclosure by using a randomized block design. The three treatment groups were tested in triplicate and included an untreated control group and groups that received a single application of 50 or 100 milligrams per liter (mg/L) of SDP based on active ingredient. All treatment concentrations are reported as active ingredient of SDP. Test enclosures were removed at the 8-hour exposure termination. Both Group 1 and Group 2 mussels remained in their assigned exposure location during the postexposure holding period. The number of zebra mussels adhering to Group 2 mussels (live and dead) was assessed 18 to 20 days postexposure in addition to assessing the survival of Group 1 and Group 2 unionid mussels. SDP, administered as a single treatment, significantly ( p < 0.01) reduced the number of adhering zebra mussels when compared to the untreated controls. The number of zebra mussels adhering to unionid mussels (Group 2) was reduced 53 percent in the 50-mg/L treatment group and 68 percent in the 100-mg/L treatment group. The number of adhering zebra mussels did not differ ( p = 0.79) between the 50- and 100-mg/L treatment groups after exposure. When standardized to the amount of SDP applied per square meter, each gram (g) of SDP applied in the 50-mg/L treatment reduced the number of adhering zebra mussel 59.8 percent more than the 100-mg/L treatment group. Group 1 mussel survival did not differ between treatment groups ( p > 0.05); however, a difference was detected ( p < 0.01) in the survival of Group 2 mussels. The survival of Group 2 mussels did not differ ( p > 0.23) between control and treated groups. A difference in Group 2 mussel survival was detected ( p = 0.03; odds ratio [OR] = 0.290) between the 50- and 100-mg/L treatment groups (that is, the survival was highest in the 50-mg/L treatment group and lowest in the 100-mg/L treatment group), however, the biological significance of the difference is indeterminate.
Minnesota↗
Reconnaissance evaluation of surface-water quality in Eagle, Grand, Jackson, Pitkin, Routt, and Summit Counties, Colorado
Water-quality data were collected from streams in a six-county area to determine if the streams were polluted and, if so, to determine the sources of the pollution. Eighty-three stream sites were selected for sampling in Eagle, Grand, Jackson, Pitkin, Routt, and Summit Counties. Also included are data from 28 sites in Routt County collected for a U.S. Geological Survey cooperative study on the Yampa River basin. A summary of data collected prior to this study, results of current chemical and biological sampling, and needs for future water-quality monitoring are reported for each county. The kinds of data collected were site specific depending upon land-use activities. Data collected at selected sites included temperature, pH, specific conductance, dissolved oxygen, and stream discharge. Chemical data collected included nutrients, inorganics, organics, and trace elements. Biological data collected included counts and species composition of total and fecal-coliform bacteria, fecal-streptococcus bacteria, benthic invertebrates, and phytoplankton. Most of the sites were sampled three times: in April-June 1976, August 1976, and January 1977. The major water-quality problems at the 17 sites sampled in Eagle County are related to mining, recreation, and geology. The Eagle River and Cross Creek in the vicinity of Minturn have concentrations of trace elements that exceed water-quality standards. Gore Creek is influenced by winter recreational use and the water during the winter has total bacteria counts as great as 72,000 per 100 milliliters and concentrations of un-ionized ammonia greater than 0.02 milligrams per liter downstream from the sewage-treatment plant. Mineralized water in the downstream reaches of the Eagle River results from natural chemical processes. The water-quality problems in Grand County, especially on the Fraser River, are related to recreation and urban activities. Chemical and biological indications of water-quality degradation exist for the Fraser River downstream from Winter Park.
Colorado↗
Preliminary geological, geophysical, and biological data from the Gorda Ridge
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Open-File Report↗