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At least 127 records · Page 7Linked to original sources

DNA-labeled clay: A sensitive new method for tracing particle transport

The behavior of mobile colloids and sediment in most natural environments remains poorly understood, in part because characteristics of existing sediment tracers limit their widespread use. Here we describe the development of a new approach that uses a DNA-labeled montmorillonite clay as a highly sensitive and selective sediment tracer that can potentially characterize sediment and colloid transport in a wide variety of environments, including marine, wetland, ground-water, and atmospheric systems. Characteristics of DNA in natural systems render it unsuitable as an aqueous tracer but admirably suited as a label for tracing particulates. The DNA-labeled-clay approach, using techniques developed from molecular biology, has extremely low detection limits, very specific detection, and a virtually infinite number of tracer signatures. Furthermore, DNA-labeled clay has the same physical characteristics as the particles it is designed to trace, it is environmentally benign, and it can be relatively inexpensively produced and detected. Our initial results show that short (500 base pair) strands of synthetically produced DNA reversibly adsorb to both Na-montmorillonite and powdered silica surfaces via a magnesium bridge. The DNA-montmorillonite surface complexes are stable in calcium-bicarbonate spring waters for periods of up to 18 days and only slowly desorb to the aqueous phase, whereas the silica surface complex is stable only in distilled water. Both materials readily release the adsorbed DNA in dilute EDTA solutions for amplification by the polymerase chain reaction (PCR) and quantification. The stability of the DNA-labeled clay complex suggests that this material would be appropriate for use as an extremely sensitive sediment tracer for flow periods of as long as 2 weeks, and possibly longer.

Geology

Sea-floor morphology and sedimentary environments in southern Narragansett Bay, Rhode Island

Multibeam echosounder data collected by the National Oceanic and Atmospheric Administration along with sediment samples and still and video photography of the sea floor collected by the U.S. Geological Survey were used to interpret sea-floor features and sedimentary environments in southern Narragansett Bay, Rhode Island, as part of a long-term effort to map the sea floor along the northeastern coast of the United States. Sea-floor features include rocky areas and scour depressions in high-energy environments characterized by erosion or nondeposition, and sand waves and megaripples in environments characterized by coarse-grained bedload transport. Two shipwrecks are also located in the study area. Much of the sea floor is relatively featureless within the resolution of the multibeam data; sedimentary environments in these areas are characterized by processes associated with sorting and reworking. This report releases bathymetric data from the multibeam echosounder, grain-size analyses of sediment samples, and photographs of the sea floor and interpretations of the sea-floor features and sedimentary environments. It provides base maps that can be used for resource management and studies of topics such as benthic ecology, contaminant inventories, and sediment transport.

Rhode Island

Compilation of mercury data and associated risk to human and ecosystem health, Bad River Band of Lake Superior Chippewa, Wisconsin

Mercury is an environmentally ubiquitous neurotoxin, and its methylated form presents health risks to humans and other biota, primarily through dietary intake. Because methylmercury bioaccumulates and biomagnifies in living tissue, concentrations progressively increase at higher trophic positions in ecosystem food webs. Therefore, the greatest health risks are for organisms at the highest trophic positions and for humans who consume organisms such as fish from these high trophic positions. Data on environmental mercury concentrations in various media and biota provide a basis for comparison among sites and regions and for evaluating ecosystem health risks. The U.S. Geological Survey, in cooperation with the Natural Resources Department, Bad River Band of Lake Superior Chippewa, have compiled a dataset from analyses of mercury concentrations in surface water, bed sediment, fish tissue, Rana clamitans (green frog) tissue, Haliaeetus leucocephalus (bald eagle) feathers, Lontra canadensis (North American river otter) hair, Zizania palustris (northern wild rice), and litterfall from samples collected in the Bad River watershed, Wisconsin during 2004–18. These data originated from either the Natural Resources Department or another agency based on samples collected within or near to Bad River Tribal lands before transfer to the U.S. Geological Survey for compilation and analysis at the onset of the project. This report describes the compiled mercury dataset, provides comparisons to similar measurements in the region and elsewhere, and evaluates health risks to humans and to the sampled biota. Except for litterfall, data were not collected on a consistent, regular basis over a sufficient period to evaluate temporal patterns. The reported mercury concentrations are generally similar to those reported elsewhere in the upper Great Lakes region. Reported values are consistent with atmospheric deposition as the principal source and reflect a favorable environment for mercury methylation. Fish mercury concentrations increased at higher food web positions and generally increased with length in most species measured. Sander vitreus (walleye) present the greatest risk to humans among fishes considered here because of their high trophic position and associated elevated mercury concentrations in combination with relatively high walleye consumption rates by the Native American community. Methylmercury concentrations in wild rice are generally low and likely pose little health risk. Despite reports of declining atmospheric mercury deposition across eastern North America during the past decade, a downward trend in litterfall mercury deposition was not evident in samples collected during 2012–18. Limitations in this data compilation and analysis were noted due to missing information such as collection dates and site locations for some samples. Regular monitoring of mercury in litterfall and surface waters along with periodic collection of fish would enable evaluation of temporal change in the mercury cycle that might affect future risk to humans and aquatic ecosystem inhabitants.

Wisconsin

Thickness and consolidation of deep-sea sediments: A discussion

Hamilton (1959) concluded that in most sediments excess pore-water pressure is equal to zero - that is, the hydrostatic pressure is at atmospheric pressure. This note points out that in terrestrial environments the occurrence of artesian water (excess pore-water pressure) is commonplace and widespread and that such excess pressure is the source of energy for flowing water wells and for many flowing oil wells, "gushers," or "blowouts".

Bulletin of the Geological Society of America

Effect of hydrological conditions on nitrous oxide, methane, and carbon dioxide dynamics in a bottomland hardwood forest and its implication for soil carbon sequestration

This study was conducted at three locations in a bottomland hardwood forest with a distinct elevation and hydrological gradient: ridge (high, dry), transition, and swamp (low, wet). At each location, concentrations of soil greenhouse gases (N 2 O, CH 4 , and CO 2 ), their fluxes to the atmosphere, and soil redox potential (Eh) were measured bimonthly, while the water table was monitored every day. Results show that soil Eh was significantly ( P < 0.001) correlated with water table: a negative correlation at the ridge and transition locations, but a positive correlation at the permanently flooded swamp location. Both soil gas profile analysis and surface gas flux measurements indicated that the ridge and transition locations could be a sink of atmospheric CH 4 , especially in warm seasons, but generally functioned as a minor source of CH 4 in cool seasons. The swamp location was a major source of CH 4 , and the emission rate was higher in the warm seasons (mean 28 and median 23 mg m −2 h −1 ) than in the cool seasons (both mean and median 13 mg m −2 h −1 ). Average CO 2 emission rate was 251, 380 and 52 mg m −2 h −1 for the ridge, transition and swamp location, respectively. At each location, higher CO 2 emission rates were also found in the warm seasons. The lowest CO 2 emission rate was found at the swamp location, where soil C content was the highest, due to less microbial biomass, less CO 2 production in such an anaerobic environment, and greater difficulty of CO 2 diffusion to the atmosphere. Cumulative global warming potential emission from these three greenhouse gases was in an order of swamp > transition > ridge location. The ratio CO 2 /CH 4 production in soil is a critical factor for evaluating the overall benefit of soil C sequestration, which can be greatly offset by CH 4 production and emission.

Global Change Biology

Plants in alpine environments

Alpine and subalpine plant species are of special interest in ecology and ecophysiology because they represent life at the climate limit and changes in their relative abundances can be a bellwether for climate-change impacts. Perennial life forms dominate alpine plant communities, and their form and function reflect various avoidance, tolerance, or resistance strategies to interactions of cold temperature, radiation, wind, and desiccation stresses that prevail in the short growing seasons common (but not ubiquitous) in alpine areas. Plant microclimate is typically uncoupled from the harsh climate of the alpine, often leading to substantially warmer plant temperatures than air temperatures recorded by weather stations. Low atmospheric pressure is the most pervasive, fundamental, and unifying factor for alpine environments, but the resulting decrease in partial pressure of CO 2 does not significantly limit carbon gain by alpine plants. Factors such as tree islands and topographic features create strong heterogeneous mosaics of microclimate and snow cover that are reflected in plant community composition. Factors affecting tree establishment and growth and formation of treeline are key to understanding alpine ecology. Carbohydrate and other carbon storage, rapid development in a short growing season, and physiological function at low temperature are prevailing attributes of alpine plants. A major contemporary research theme asks whether chilling at alpine-treeline affects the ability of trees to assimilate the growth resources and particularly carbon needed for growth or whether the growth itself is limited by the alpine environment. Alpine areas tend to be among the best conserved, globally, yet they are increasingly showing response to a range of anthropogenic impacts, such as atmospheric deposition.

Book chapter

Virus-like particle production in atmospheric eubacteria isolates

Culturable eubacterial isolates were collected at various altitudes in Earth’s atmosphere to include ~1.5 m above ground in Tallahassee, Florida, USA, ~10.0 m above sea level over the mid-Atlantic ridge (~15oN), ~ 20 km above ground over the continental United States, ~20 km above sea level over the Pacific Ocean near southern California and from the atmosphere of Carlsbad Cavern, Carlsbad Cavern National Park, New Mexico, USA. Isolates were screened for the presence of inducible virus-like particles (VLP) through use of mitomycin C and epifluorescent direct counts. We determined that 92.7% of the isolates carried inducible (VLP) counts in exposed versus non-exposed culture controls and that the relationship was statistically significant. Further statistical analyses revealed that the numbers of isolates that demonstrated VLP production did not vary among collection sites. These data demonstrate a high prevalence of VLP generation in isolates collected in the lower atmosphere and at extreme altitudes. Also shows that species of eubacteria that are resistant to the rigors of atmospheric transport play a significant role in long-range atmospheric inter- and intra-continental dispersion of VLP and that long-range atmospheric transport of VLP may enhance rates of evolution at the microbial scale in receiving environments.

Atmosphere

Vapor pressure and vapor fractionation of silicate melts of tektite composition

The total vapor pressure of Philippine tektite melts of approximately 70 per cent silica has been determined at temperatures ranging from 1500 to 2100°C. This pressure is 190 ± 40 mm Hg at 1500°C, 450 ± 50 mm at 1800°C and 850 ± 70 mm at 2100° C. Determinations were made by visually observing the temperature at which bubbles began to form at a constant low ambient pressure. By varying the ambient pressure, a boiling point curve was constructed. This curve differs from the equilibrium vapor pressure curve due to surface tension effects. This difference was evaluated by determining the equilibrium bubble size in the melt and calculating the pressure due to surface tension, assuming the latter to be 380 dyn/cm. The relative volatility from tektite melts of the oxides of Na, K, Fe, Al and Si has been determined as a function of temperature, total pressure arid roughly, of oxygen fugacity. The volatility of SiO 2 is decreased and that of Na 2 O and K 2 O is increased in an oxygen-poor environment. Preliminary results indicate that volatilization at 2100°C under atmospheric pressure caused little or no change in the percentage Na 2 O and K 2 O. The ratio Fe 3 Fe 2 "> Fe 3 Fe 2 of the tektite is increased in ambient air at a pressure of 9 × 10 −4 mm Hg (= 10 6.5 atm O 2 , partial pressure) at 2000°C. This suggests that tektites were formed either at lower oxygen pressures or that they are a product of incomplete oxidation of parent material with a still lower ferricferrous ratio.

Geochimica et Cosmochimica Acta

Aeolian processes at the Mars Exploration Rover Meridiani Planum landing site

The martian surface is a natural laboratory for testing our understanding of the physics of aeolian (wind-related) processes in an environment different from that of Earth. Martian surface markings and atmospheric opacity are time-variable, indicating that fine particles at the surface are mobilized regularly by wind. Regolith (unconsolidated surface material) at the Mars Exploration Rover Opportunity's landing site has been affected greatly by wind, which has created and reoriented bedforms, sorted grains, and eroded bedrock. Aeolian features here preserve a unique record of changing wind direction and wind strength. Here we present an in situ examination of a martian bright wind streak, which provides evidence consistent with a previously proposed formational model for such features. We also show that a widely used criterion for distinguishing between aeolian saltation- and suspension-dominated grain behaviour is different on Mars, and that estimated wind friction speeds between 2 and 3 m s-1, most recently from the northwest, are associated with recent global dust storms, providing ground truth for climate model predictions.

Nature

Decomposition

A cornerstone of ecosystem ecology, decomposition was recognized as a fundamental process driving the exchange of energy in ecosystems by early ecologists such as Lindeman 1942 and Odum 1960). In the history of ecology, studies of decomposition were incorporated into the International Biological Program in the 1960s to compare the nature of organic matter breakdown in various ecosystem types. Such studies still have an important role in ecological studies of today. More recent refinements have brought debates on the relative role microbes, invertebrates and environment in the breakdown and release of carbon into the atmosphere, as well as how nutrient cycling, production and other ecosystem processes regulated by decomposition may shift with climate change. Therefore, this bibliography examines the primary literature related to organic matter breakdown, but it also explores topics in which decomposition plays a key supporting role including vegetation composition, latitudinal gradients, altered ecosystems, anthropogenic impacts, carbon storage, and climate change models. Knowledge of these topics is relevant to both the study of ecosystem ecology as well projections of future conditions for human societies.

Article

Bibliography of publications from the Toxic Substances Hydrology Program, U.S. Geological Survey

The U.S. Geological Survey began the Toxic Substances Hydrology Program in 1982 to study, in an interdisciplinary atmosphere, the fate and effects of toxic substances in the environment. The objective of the Program is to provide the earth-science information needed to prevent or mitigate contamination of the Nation's ground and surface waters. To achieve this goal, research is conducted in four categories--focused field investigations of contaminated sites, additional research on toxic substances hydrology, development of methods to study or sample contaminated waters, and investigations of nonpoint sources of contamination. This report contains citations of reports on research conducted under the auspices of the Program from the beginning of the Program through the end of 1993.

Open-File Report

Dating groundwater with trifluoromethyl sulfurpentafluoride (SF 5CF3), sulfur hexafluoride (SF6), CF 3Cl (CFC-13), and CF2Cl2 (CFC-12)

[1] A new groundwater dating procedure using the transient atmospheric signal of the environmental tracers SF5CF3, CFC-13, SF6, and CFC-12 was developed. The analytical procedure determines concentrations of the four tracers in air and water samples. SF 5CF3 and CFC-13 can be used to date groundwaters in some environments where the CFCs and SF6 have previously failed because these new tracers have increasing atmospheric input functions, no known terrigenic source, and are believed to be stable under reducing conditions. SF5CF3 has a dating range from 1970 to modern; the mixing ratio (mole fraction) in North American air has increased from the detection limit of 0.005 parts per trillion (ppt) to the 2006 mole fraction of about 0.16 ppt. No evidence was found for degradation of SF5CF3 in laboratory anaerobic systems. The solubility of SF5CF3 was measured in water from 1 to 35??C. Groundwater samples that contained large amounts of terrigenic SF6 did not contain terrigenic SF 5CF3. CFC-13 is a trace atmospheric gas with a dating range in groundwater of about 1965 to modem. CFC-13 has been used primarily in very low-temperature refrigeration; thus groundwater environments are less likely to be contaminated with nonatmospheric sources as compared to other widely used CFCs. Because of the low solubility of SF5CF3 and CFC-13 in water, an excess air correction must be applied to the apparent ages. The new dating procedure was tested in water samples from wells and springs from Maryland, Virginia, and West Virginia.

Water Resources Research

The rise of fire: Fossil charcoal in late Devonian marine shales as an indicator of expanding terrestrial ecosystems, fire, and atmospheric change

Fossil charcoal provides direct evidence for fire events that, in turn, have implications for the evolution of both terrestrial ecosystems and the atmosphere. Most of the ancient charcoal record is known from terrestrial or nearshore environments and indicates the earliest occurrences of fire in the Late Silurian. However, despite the rise in available fuel through the Devonian as vascular land plants became larger and trees and forests evolved, charcoal occurrences are very sparse until the Early Mississippian where extensive charcoal suggests well-established fire systems. We present data from the latest Devonian and Early Mississippian of North America from terrestrial and marine rocks indicating that fire became more widespread and significant at this time. This increase may be a function of rising O 2 levels and the occurrence of fire itself may have contributed to this rise through positive feedback. Recent atmospheric modeling suggests an O 2 low during the Middle Devonian (around 17.5%), with O 2 rising steadily through the Late Devonian and Early Mississippian (to 21–22%) that allowed for widespread burning for the first time. In Devonian-Mississippian marine black shales, fossil charcoal (inertinite) steadily increases up-section suggesting the rise of widespread fire systems. There is a concomitant increase in the amount of vitrinite (preserved woody and other plant tissues) that also suggests increased sources of terrestrial organic matter. Even as end Devonian glaciation was experienced, fossil charcoal continued to be a source of organic matter being introduced into the Devonian oceans. Scanning electron and reflectance microscopy of charcoal from Late Devonian terrestrial sites indicate that the fires were moderately hot (typically 500–600 °C) and burnt mainly surface vegetation dominated by herbaceous zygopterid ferns and lycopsids, rather than being produced by forest crown fires. The occurrence and relative abundance of fossil charcoal in marine black shales are significant in that these shales may provide a more continuous record of fire than is preserved in terrestrial environments. Our data support the idea that major fires are not seen in the fossil record until there is both sufficient and connected fuel and a high enough atmospheric O 2 content for it to burn.

American Journal of Science

An improved dark-object subtraction technique for atmospheric scattering correction of multispectral data

Digital analysis of remotely sensed data has become an important component of many earth-science studies. These data are often processed through a set of preprocessing or “clean-up” routines that includes a correction for atmospheric scattering, often called haze. Various methods to correct or remove the additive haze component have been developed, including the widely used dark-object subtraction technique. A problem with most of these methods is that the haze values for each spectral band are selected independently. This can create problems because atmospheric scattering is highly wavelength-dependent in the visible part of the electromagnetic spectrum and the scattering values are correlated with each other. Therefore, multispectral data such as from the Landsat Thematic Mapper and Multispectral Scanner must be corrected with haze values that are spectral band dependent. An improved dark-object subtraction technique is demonstrated that allows the user to select a relative atmospheric scattering model to predict the haze values for all the spectral bands from a selected starting band haze value. The improved method normalizes the predicted haze values for the different gain and offset parameters used by the imaging system. Examples of haze value differences between the old and improved methods for Thematic Mapper Bands 1, 2, 3, 4, 5, and 7 are 40.0, 13.0, 12.0, 8.0, 5.0, and 2.0 vs. 40.0, 13.2, 8.9, 4.9, 16.7, and 3.3, respectively, using a relative scattering model of a clear atmosphere. In one Landsat multispectral scanner image the haze value differences for Bands 4, 5, 6, and 7 were 30.0, 50.0, 50.0, and 40.0 for the old method vs. 30.0, 34.4, 43.6, and 6.4 for the new method using a relative scattering model of a hazy atmosphere.

Arizona

On the twenty-first-century wet season projections over the Southeastern United States

This paper reconciles the difference in the projections of the wet season over the Southeastern United States (SEUS) from a global climate model (the Community Climate System Model Version 3 [CCSM3]) and from a regional climate model (the Regional Spectral Model [RSM]) nested in the CCSM3. The CCSM3 projects a dipole in the summer precipitation anomaly: peninsular Florida dries in the future climate, and the remainder of the SEUS region becomes wetter. The RSM forced with CCSM3 projects a universal drying of the SEUS in the late twenty-first century relative to the corresponding twentieth-century summer. The CCSM3 pattern is attributed to the “upped-ante” mechanism, whereby the atmospheric boundary layer moisture required for convection increases in a warm, statically stable global tropical environment. This criterion becomes harder to meet along convective margins, which include peninsular Florida, resulting in its drying. CCSM3 also projects a southwestward expansion of the North Atlantic subtropical high that leads to further stabilizing of the atmosphere above Florida, inhibiting convection. The RSM, because of its high (10-km grid) resolution, simulates diurnal variations in summer rainfall over SEUS reasonably well. The RSM improves upon CCSM3 through the RSM’s depiction of the diurnal variance of precipitation, which according to observations accounts for up to 40 % of total seasonal precipitation variance. In the future climate, the RSM projects a significant reduction in the diurnal variability of convection. The reduction is attributed to large-scale stabilization of the atmosphere in the CCSM3 projections.

Alabama;Arkansas;Florida;Georgia;Kentucky;Louisian

Seed germination of two Everglades species, Cladium jamaicense and Typha domingensis

The germination requirements of Cladium jamaicense Crantz and Typha domingensis Pers. were studied under controlled conditions in the laboratory. Treatments included six temperature regimes, (constant temperatures of 15 20, 25, 30°C, and two fluctuating day : night temperature regimes of 25 : 10°C and 30 : 20°C), two light levels (14 : 10 h light : dark photoperiod and 24 h dark environment), two substrates (peat and water) and two O 2 levels (atmospheric and low (4.34%) O 2 concentration) using a complete randomized block design. The average incubation period needed for seeds to germinate was shorter for T. domingensis (1.1–19.5 days) than for C. jamaicense (26–46 days) and the final germination percentage was higher for T. domingensis than for C. jamaicense (85 vs. 42 %). Cladium jamaicense only germinated with fluctuating temperatures whereas T. domingensis germinated at all temperature regimes. Light was required for T. domingensis seeds to germinate, whereas C. jamaicense could germinate at a reduced rate in the dark. Peat substrate had a positive effect on germination in both species. Peat substrate shortened the incubation period for seeds of both species, enhanced germination of T. domingensis , especially at low temperatures, and enhanced germination of C. jamaicense in the dark. Low oxygen availability did not influence the germination of C. jamaicense but enhanced germination of T. domingensis at low temperatures. Although the two species differ significantly in their germination requirements and responses to specific environmental conditions, germination of both these species was enhanced by environmental conditions typical of exposed water saturated mudflats or sediment surfaces. Typha domingensis produces a large number of small seeds, which do not germinate when covered by sediment. In contrast, C. jamaicense produces fewer and larger seeds, with resources able to support growth through a thin layer of sediment or detritus.

Florida

Surficial geology of the sea floor in Central Rhode Island Sound Southeast of Point Judith, Rhode Island

The U.S. Geological Survey (USGS) and the National Oceanic and Atmospheric Administration (NOAA) are working together to study sea-floor environments off the northeast coast of the United States. During 2008, NOAA survey H11996 collected multibeam echosounder data in a 65-square kilometer area in central Rhode Island Sound, southeast of Point Judith, Rhode Island. During 2010, the USGS collected bottom photographs and sediment samples from 25 stations in this study area. The bathymetry, photography, and sediment data are used to interpret sea-floor features including scour depressions, sand waves, trawl marks, and dredge spoils. Scour depressions cover the bathymetric highs in much of the study area. Sand waves are located mostly in the southwest, and trawl marks tend to be in the northern regions. Dredge spoils are located at a disposal site in a bathymetric low in the western end of the study area. Most stations have a sea-floor surface of sand or silty sand, but eight of the stations have boulders to pea-sized gravel or gravelly sediment on the surface. Photographs show sandy areas typically have scattered burrows, shells, amphipod communities, and worm tubes. Boulders and cobbles are commonly overgrown with hydrozoans and anemones.

Central Rhode Island Sound;Southeast Of Point Judi

An evaluation of remote sensing technologies for the detection of fugitive contamination at selected Superfund hazardous waste sites in Pennsylvania

This evaluation was conducted to assess the potential for using both traditional remote sensing, such as aerial imagery, and emerging remote sensing technology, such as hyperspectral imaging, as tools for postclosure monitoring of selected hazardous waste sites. Sixteen deleted Superfund (SF) National Priorities List (NPL) sites in Pennsylvania were imaged with a Civil Air Patrol (CAP) Airborne Real-Time Cueing Hyperspectral Enhanced Reconnaissance (ARCHER) sensor between 2009 and 2012. Deleted sites are those sites that have been remediated and removed from the NPL. The imagery was processed to radiance and atmospherically corrected to relative reflectance with standard software routines using the Environment for Visualizing Imagery (ENVI, ITT–VIS, Boulder, Colorado) software. Standard routines for anomaly detection, endmember collection, vegetation stress, and spectral analysis were applied.

Pennsylvania