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Using high resolution satellite and telemetry data to track flooded habitats, their use by waterfowl, and evaluate effects of drought on waterfowl and shorebird bioenergetics in California

Wetland managers in the Central Valley of California, a dynamic hydrological landscape, require information regarding the amount and location of existing wetland habitat to make decisions on how to best use water resources to support multiple wildlife objectives, particularly during drought. Scientists from the U.S. Geological Survey Western Ecological Research Center (WERC), Point Blue Conservation Science (Point Blue), and the U.S. Fish and Wildlife Service (USFWS) partnered to learn how wetland and flooded agricultural habitats used by waterfowl and shorebirds change during the non-breeding season (July–April) particularly during drought. During extreme drought conditions, the ability to provide sufficient water for wildlife often depends on the timing of water deliveries to managed wetlands and winter-flooded crop fields and decisions on whether to fallow croplands. Waterfowl and shorebirds could be particularly affected by these decisions because they typically rest and feed in flooded habitats. Poor habitat conditions resulting from spatially or temporally suboptimal water deliveries (that is, mismatch between waterfowl habitat needs and timing and location of flooded habitats) could reduce waterfowl hunting opportunities and body condition. Point Blue scientists developed a system for near real-time tracking of habitats used by waterfowl, shorebirds, and some other wetland-dependent “waterbirds” ( www.pointblue.org/watertracker ) and to assess the impacts of drought on habitat availability and on waterfowl and shorebird bioenergetics. The WERC researchers linked these data with near real-time tracking (telemetry) data of duck locations throughout the Valley. The team used these two datasets to relate duck locations to open-water characteristics and to learn how waterfowl use habitats under spatially and temporally changing conditions during drought and non-drought periods. We found that recent extreme drought (2013–15) significantly changed the timing and magnitude of flooding and consequently reduced the availability of habitats used by waterfowl and shorebirds more than other recent historic droughts 2000–11. Drought reduced irrigations of moist soil seed plants and thus there was lower food energy available for waterfowl. Analyses using bioenergetics models indicated that, overall, extreme drought increased food energy deficits (total number of deficit days) for shorebirds and waterfowl. Our analysis indicated a strong direct relationship between duck locations and classified habitat derived from open-water data during the wintering period (October–March). This result helps confirm the application of dynamic water data to identify flooded areas that provide waterfowl habitat. Presence of open water at a 1-hectare resolution can be used effectively to identify flooded landscape areas available as habitat for ducks. Our discoveries from evaluating use of space by ducks also indicated that nighttime feeding locations of ducks were concentrated nearby primary roosts and that foraging distances could depend on hydrologic dynamics of location (Suisun Marsh versus California excluding Suisun Marsh) and time of season (early, middle, late). Other results indicated that some areas on the California landscape with extremely reliable water supplies could receive consistent use by ducks year after year (in essence, almost drought proof). The Water Tracker is set up to automatically track wetland habitat and food availability each year and is making these data available to water and wetland managers. Results from this research are a significant step toward understanding how waterfowl and shorebird habitats can be optimally managed on the landscape to support desired populations of these migratory birds during extreme drought.

California↗

Geological Survey research, 1965, Chapter D

Scientific notes and summaries of investigations by members of the Conservation, Geologic, and Water Resources Divisions tn geology, hydrology, and related fields.

Professional Paper↗

Patterns and drivers for wetland connections in the Prairie Pothole Region, United States

Ecosystem function in rivers, lakes and coastal waters depends on the functioning of upstream aquatic ecosystems, necessitating an improved understanding of watershed-scale interactions including variable surface-water flows between wetlands and streams. As surface water in the Prairie Pothole Region expands in wet years, surface-water connections occur between many depressional wetlands and streams. Minimal research has explored the spatial patterns and drivers for the abundance of these connections, despite their potential to inform resource management and regulatory programs including the U.S. Clean Water Act. In this study, wetlands were identified that did not intersect the stream network, but were shown with Landsat images (1990–2011) to become merged with the stream network as surface water expanded. Wetlands were found to spill into or consolidate with other wetlands within both small (2–10 wetlands) and large (>100 wetlands) wetland clusters, eventually intersecting a stream channel, most often via a riparian wetland. These surface-water connections occurred over a wide range of wetland distances from streams (averaging 90–1400 m in different ecoregions). Differences in the spatial abundance of wetlands that show a variable surface-water connection to a stream were best explained by smaller wetland-to-wetland distances, greater wetland abundance, and maximum surface-water extent. This analysis demonstrated that wetland arrangement and surface water expansion are important mechanisms for depressional wetlands to connect to streams and provides a first step to understanding the frequency and abundance of these surface-water connections across the Prairie Pothole Region.

Minnesota, North Dakota, South Dakota↗

Water resources of the Humboldt River Valley near Winnemucca, Nevada

This report, resulting from studies made by the U.S. Geological Survey as part of the interagency Humboldt River Research Project, describes the qualitative and quantitative relations among the components of the hydrologic system in the Winnemucca Reach of the Humboldt River valley. The area studied includes the segment of the Humboldt River valley between the Comus and Rose Creek gaging stations. It is almost entirely in Humboldt County in north-central Nevada, and is about 200 miles downstream from the headwaters of the Humboldt River. Agriculture is the major economic activity in the area. Inasmuch as the valley lowlands receive an average of about 8 inches of precipitation per year and because the rate of evaporation from free-water surfaces is about six times the average annual precipitation, all crops in the area (largely forage crops) are irrigated. About 85 percent of the cultivated land is irrigated with Humboldt River water; the remainder is irrigated from about 20 irrigation wells. The consolidated rocks of the uplifted fault-block mountains are largely barriers to the movement of ground water and form ground-water and surface-water divides. Unconsolidated deposits of late Tertiary and Quaternary age underlie the valley lowlands to a maximum depth of about 5,000 feet. These deposits are in hydraulic continuity with the Humboldt River and store and transmit most of the economically recoverable ground water. Included in the valley fill is a highly permeable sand and gravel deposit having a maximum thickness of about 90-100 feet; it underlies the flood plain and bordering terraces throughout most of the project area. This deposit is almost completely saturated and contains about 500,000 acre-feet of ground water in storage. The Humboldt River is the source of 90-95 percent of the surface-water inflow to the area. In water years 1949-62 the average annual streamflow at the Comus gaging station at the upstream margin of the area was 172,100 acre-feet; outflow at the Rose Creek gaging station averaged about 155,400 acre-feet. Accordingly, the measured loss of Humboldt River streamflow averaged nearly 17,000 acre-feet per year. Most of this water was transpired by phreatophytes and crops, evaporated from free-water surfaces, and evaporated from bare soil. Inasmuch as practically no tributary streamflow normally discharges into the river in the Winnemucca reach and because pumpage is virtually negligible during the nonirrigation season, gains and losses of streamflow during most of the year reflect the close interrelation of the Humboldt River and the groundwater reservoir. An estimated average of about 14,000 acre-feet per year of ground-water underflow moves toward the Humboldt River from tributary areas. Much of this water discharges into the Humboldt River; hovever, some evaporates or is transpired before reaching the river. More than 65 percent of the average annual flow of the river horn-ally occurs in April, May, and June owing to the spring runoff. The stage of the river generally rises rapidly during these months causing water to move from the river to the ground-water reservoir. Furthermore, the period of high streamflow normally coincides with the irrigation season, and much of the excess irrigation water diverted from the river percolates downward to the zone of saturation. The net measured loss of streamflow in April-June, which averaged about 24,000 acre-feet in water years 1949-62, was about 7,000 acre-feet more than the average annual loss. The estimated net average annual increase of ground water in storage during these months in this period was on the order of 10,000 acre-feet. Following the spring runoff and the irrigation season, normally in July, some of the ground water stored in the flood-plain deposits during the spring runoff begins to discharge into the river. In addition, ground-water inflow from tributary areas again begins to discharge into the river. Experiments utilizin

Water Supply Paper↗

Fungal endophytes: diversity and functional roles

All plants in natural ecosystems appear to be symbiotic with fungal endophytes. This highly diverse group of fungi can have profound impacts on plant communities through increasing fitness by conferring abiotic and biotic stress tolerance, increasing biomass and decreasing water consumption, or decreasing fitness by altering resource allocation. Despite more than 100 yr of research resulting in thousands of journal articles, the ecological significance of these fungi remains poorly characterized. Historically, two endophytic groups (clavicipitaceous (C) and nonclavicipitaceous (NC)) have been discriminated based on phylogeny and life history traits. Here, we show that NC-endophytes represent three distinct functional groups based on host colonization and transmission, in planta biodiversity and fitness benefits conferred to hosts. Using this framework, we contrast the life histories, interactions with hosts and potential roles in plant ecophysiology of C- and NC-endophytes, and highlight several key questions for future work in endophyte biology.

New Phytologist↗

Subsidence and carbon fluxes in the Sacramento/San Joaquin Delta, California

The Sacramento/San Joaquin Delta was once tidal marshland and was formed by the confluence of the Sacramento and the San Joaquin Rivers. The delta covers more than 1,000 square miles and is bordered by the major population centers of the San Francisco Bay area, Sacramento, and Stockton (fig. 1). The delta took its current form by the 1930's when drainage of 100 islands and tracts and construction of 2,250 miles of levees were completed. The land surface on the delta islands has progressively subsided below sea level since the early 20th century. The integrity of the levee network is threatened because subsidence increases the differences in water levels maintained by the levees, which can cause levee failure and consequent flooding of the delta islands. Levee failure affects the quality and beneficial use of water in the delta, which is the major source of California's water supply to millions of residents and acres of agricultural land. This Fact Sheet briefly summarizes the research done by the U.S. Geological Survey, in cooperation with the California Department of Water Resources to assess the causes of subsidence, processes that affect subsidence, and carbon fluxes in the delta.

California↗

Simulated impacts of artificial groundwater recharge and discharge of the source area and source volume of an Atlantic Coastal Plain Stream, Delaware, USA

A numerical groundwater-flow model was used to characterize the source area and volume of Phillips Branch, a baseflow-dominated stream incising a highly permeable unconfined aquifer on the low relief Delmarva Peninsula, USA. Particle-tracking analyses indicate that the source area (5.51 km 2 ) is ~20% smaller than the topographically defined watershed (6.85 km 2 ), and recharge entering ~37% of the surface watershed does not discharge to Phillips Branch. Groundwater residence time within the source volume ranges from a few days to almost 100 years, with 95% of the volume "flushing" within 50 years. Artificial discharge from groundwater pumping alters the shape of the source area and reduces baseflow due to the interception of stream flow paths, but has limited impacts on the residence time of groundwater discharged as baseflow. In contrast, artificial recharge from land-based wastewater disposal substantially reduces the source area, lowers the range in residence time due to the elimination of older flow paths to the stream, and leads to increased discharge to adjacent surface-water bodies. This research suggests that, in this and similar hydrogeologic settings, the "watershed" approach to water-resource management may be limited, particularly where anthropogenic stresses alter the transport of soluble contaminants through highly permeable unconfined aquifers.

Delaware↗

The dominance and growth of shallow groundwater resources in continuous permafrost environments

Water is a limited resource in Arctic watersheds with continuous permafrost because freezing conditions in winter and the impermeability of permafrost limit storage and connectivity between surface water and deep groundwater. However, groundwater can still be an important source of surface water in such settings, feeding springs and large aufeis fields that are abundant in cold regions and generating runoff when precipitation is rare. Whether groundwater is sourced from suprapermafrost taliks or deeper regional aquifers will impact water availability as the Arctic continues to warm and thaw. Previous research is ambiguous about the role of deep groundwater, leading to uncertainty regarding Arctic water availability and changing water resources. We analyzed chemistry and residence times of spring, stream, and river waters in the continuous permafrost zone of Alaska, spanning the mountains to the coastal plain. Water chemistry and age tracers show that surface waters are predominately sourced from recent precipitation and have short (<50 y) subsurface residence times. Remote sensing indicates trends in the areal extent of aufeis over the last 37 y, and correlations between aufeis extent and previous year summer temperature. Together, these data indicate that surface waters in continuous permafrost regions may be impacted by short flow paths and shallow suprapermafrost aquifers that are highly sensitive to climatic and hydrologic change over annual timescales. Despite the lack of connection to regional aquifers, continued warming and permafrost thaw may promote deepening of the shallow subsurface aquifers and creation of shallow taliks, providing some resilience to Arctic freshwater ecosystems.

Proceedings of the National Academy of Sciences↗

Maintaining wetland ecosystem services in a changing climate

A changing climate is causing challenges for soil and water management in many parts of the world. Current soil management practices need to be redesigned to effectively address present and future fluctuating climates. Soil Hydrology in a Changing Climate explores how soil management practices impact soil hydrological characteristics, and how we can improve our understanding of soil and water management under changing conditions. Soil hydrology includes water infiltration and soil water storage, which are critical for agricultural plant and animal production. With our future climate predicted to include hotter, drier conditions, increases in evapotranspiration as well as fewer, more intense storms, improved soil management and soil hydrology are critical to ensuring our agriculture production can meet human demand. This comprehensive book is a valuable resource for land managers, soil conservationists, researchers and others who wish to understand how different management practices affect soil and water dynamics and how these practices can be adjusted to enhance agricultural sustainability and environmental quality.

Book chapter↗

U.S. Geological Survey Federal-State Cooperative Water-Resources Program in Nebraska

Federal, State, and local agencies share keen interests in appraising the Nation's water resources and in seeking solutions to waterrelated problems. The U.S. Geological Survey (USGS) Federal-State Cooperative Water-Resources Program was initiated in 1895 to address the diversity in missions and areas of responsibility of various agencies through joint planning and funding of hydrologic data collection, investigations, and research. During the 100-year history of the cooperative program, the USGS has performed many data-collection and investigation activities in cooperation with a variety of State and local agencies to help meet their goals and to carry out the principal mission of the Water Resources Division of the USGS--to further the understanding of water reSources throughout the Nation. The .cooperative program represents almost 50 percent of USGS water-related activities in Nebraska and is a vital component in addressing water issues of local, State, and National interest.

Nebraska↗

Cooperative federal-state liming research on surface waters impacted by acidic deposition

In the eastern and north-central United States, lakes and streams with low acid neutralizing capacity are at risk from acidity. Resource management agencies are interested in developing mitigation strategies that protect or restore fisheries in these waters. Addition of limestone (calcium carbonate) to improve water quality and prevent episodic depressions of pH during precipitation events and spring runoff is one mitigation technique being used. The ecological changes that accompany such treatment of streams and lakes are being investigated in a cooperative program between the U.S. Fish and Wildlife Service and individual states. Streams in Massachusetts, West Virginia and Tennessee, and a lake in Minnesota are included in this 5-yr research program. Intensive monitoring during pre- and post-liming tracks a suite of physical, chemical and biological parameters that influence the re-establishment or maintenance of healthy fisheries. Supporting studies on liming being conducted at Adirondack lakes in New York focus on fisheries management. A model on the influence of liming on light attenuation and thermal stratification is also being developed. Management guidelines are to be generated from the program results.

Massachusetts, Minnesota, Tennessee, West Virginia↗

Natural resource mitigation, adaptation and research needs related to climate change in the Great Basin and Mojave Desert

This report synthesizes the knowledge, opinions, and concerns of many Federal and State land managers, scientists, stakeholders, and partners from a workshop, held at the University of Nevada, Las Vegas, on April 20-22, 2010. Land managers, research scientists, and resource specialists identified common concerns regarding the potential effects of climate change on public lands and natural resources in the Great Basin and Mojave Desert and developed recommendations for mitigation, adaptation, and research needs. Water and, conversely, the effects of drought emerged as a common theme in all breakout sessions on terrestrial and aquatic species at risk, managing across boundaries, monitoring, and ecosystem services. Climate change models for the southwestern deserts predict general warming and drying with increasing precipitation variability year to year. Scientists noted that under these changing conditions the past may no longer be a guide to the future in which managers envision increasing conflicts between human water uses and sustaining ecosystems. Increasing environmental stress also is expected as a consequence of shifting ecosystem boundaries and species distributions, expansion of non-native species, and decoupling of biotic mutualisms, leading to increasingly unstable biologic communities. Managers uniformly expressed a desire to work across management and agency boundaries at a landscape scale but conceded that conflicting agency missions and budgetary constraints often impede collaboration. More and better science is needed to cope with the effects of climate change but, perhaps even more important is the application of science to management issues using the methods of adaptive management based on long-term monitoring to assess the merits of management actions. Access to data is essential for science-based land management. Basic inventories, spatial databases, baseline condition assessments, data quality assurance, and data sharing were identified as top information priorities by all participants at this workshop. Optimizing the utility of ecosystem monitoring data will require standardizing monitoring protocols across agencies. Better communication among researchers and managers and cooperation through partnerships to manage resources across boundaries were emphasized as necessary for adapting to changing climatic conditions. However, even these strategies may be insufficient unless policy mandates, agency missions, and funding are coordinated at a high level.

Scientific Investigations Report↗

Bibliography of geology and hydrology, southwestern New Mexico

The southwestern part of New Mexico is recognized as a source of abundant and varied natural resources. This bibliography of over 2,700 references concerned with geology, hydrology, chemistry, and geography has been compiled to assist physical science researchers in their study and development of this region.

New Mexico↗

Analysis of changes in water-level dynamics at selected sites in the Florida Everglades

The historical modification and regulation of the hydrologic patterns in the Florida Everglades have resulted in changes in the ecosystem of South Florida and the Florida Everglades. Since the 1970s, substantial focus has been given to the restoration of the Everglades ecosystem. The U.S. Geological Survey through its Greater Everglades Priority Ecosystem Science and National Water-Quality Assessment Programs has been providing scientific information to resource managers to assist in the Everglades restoration efforts. The current investigation included development of a simple method to identify and quantify changes in historical hydrologic behavior within the Everglades that could be used by researchers to identify responses of ecological communities to those changes. Such information then could be used by resource managers to develop appropriate water-management practices within the Everglades to promote restoration. The identification of changes in historical hydrologic behavior within the Everglades was accomplished by analyzing historical time-series water-level data from selected gages in the Everglades using (1) break-point analysis of cumulative Z-scores to identify hydrologic changes and (2) cumulative water-level frequency distribution curves to evaluate the magnitude of those changes. This analytical technique was applied to six long-term water-level gages in the Florida Everglades. The break-point analysis for the concurrent period of record (1978–2011) identified 10 common periods of changes in hydrologic behavior at the selected gages. The water-level responses at each gage for the 10 periods displayed similarity in fluctuation patterns, highlighting the interconnectedness of the Florida Everglades hydrologic system. While the patterns were similar, the analysis also showed that larger fluctuations in water levels between periods occurred in Water Conservation Areas 2 and 3 in contrast to those in Water Conservation Area 1 and the Everglades National Park. Results from the analysis indicate that the cumulative Z-score curve, in conjunction with cumulative water-level frequency distribution curves, can be a useful tool in identifying and quantifying changes in historical hydrologic behavior within the Everglades. In addition to the analysis, a spreadsheet application was developed to assist in applying these techniques to time-series water-level data at gages within the Everglades and is included with this report.

Florida↗

Evapotranspiration terminology and definitions

Evapotranspiration (ET), the combined process of evaporation from soil and plant surfaces and transpiration from plant tissue, plays a pivotal role in the global water and energy balance. Accurately quantifying ET at various spatial scales is important for diverse applications, including irrigation and natural resource management. While efforts to standardize ET methodology have progressed over the last few decades, some confusion and disagreements in terminology persist among communities of researchers and practitioners involved in the measurement, estimation, and simulation of ET. This technical note addresses the historical evolution and standardization of ET terminology, aiming to reduce and mitigate disparities in definitions and usage by advocating for standardized definitions and emphasizing the adoption of reference ET ( ET ref ) terminology to promote consistency and accuracy and to avoid ambiguity. This document provides comprehensive definitions of key terms, including crop (i.e., vegetation cover) coefficients, consumptive use (CU), actual crop evapotranspiration ( ET a ), and ET ref variants for short (grass, ET o ) and tall (alfalfa, ET r ) reference crops. Practical discussion on several relevant topics is given: (1) single and dual crop coefficient approaches, (2) applications to nonagricultural vegetation, (3) recommended subscripts for terms, (4) practical guidelines and considerations for ET ref calculation, (5) encouragement to replace “potential ET” terminology with better terms, (6) clarification on maximum ET ( ET max ) and maximum crop coefficient ( K c max ) terms, (7) ET products derived from remote sensing, (8) a brief description of the role of ET in water rights, and (9) a figure illustrating the use of the terms defined herein. The conclusion emphasizes the importance of consistent terminology for effective communication among researchers and end-users, which will facilitate the adoption of standardized ET methods and technologies. This technical note was created by the American Society of Civil Engineers, Environmental and Water Resources Institute (ASCE-EWRI), Evapotranspiration in Irrigation and Hydrology Committee, with input and endorsement from other relevant organizations in the United States and internationally. This note serves as a comprehensive reference guide for ET practitioners and researchers.

Irrigation and Drainage Engineering↗

Hydrologic Resources of Guam

Introduction The U.S. Territory of Guam, which lies in the western Pacific Ocean near latitude 13?28'N and longitude 144?45'E, is the largest (211 mi2) and southernmost of the islands in the Mariana chain. Ground water supplies about 80 percent of the drinking water for the island's 150,000 residents and nearly one million visitors per year. In northern Guam, water is obtained from wells that tap the upper part of a fresh ground-water lens in an aquifer composed mainly of limestone. About 180 wells, nearly all in the north, withdraw about 35 Mgal/d of water with chloride concentrations ranging from 6 to 585 mg/L. In southern Guam, the main source of freshwater is from surface water that runs off the weathered volcanic rocks that are exposed over much of the area. About 9.9 Mgal/d of freshwater is obtained using surface reservoirs. The island's freshwater resources are adequate to meet current (2003) needs, but future demands will eventually be higher. To better understand the hydrology of the island, the U.S. Geological Survey (USGS) entered into a cooperative study with the Water and Environmental Research Institute of the Western Pacific (WERI) at the University of Guam. The objective of the study was to provide a better understanding of the water resources of the island through analysis of data collected by the USGS on Guam. This report provides a description of the general hydrologic principles of the island's ground-water systems, as well as of the rainfall and geology of Guam. Hydrologic data described in the report include water levels, chloride concentrations, and pumpage from ground-water wells and streamflow data from southern Guam.

Water-Resources Investigations Report↗

Groundwater availability study for Guam; goals, approach, products, and schedule of activities

An expected significant population increase on Guam has raised concern about the sustainability of groundwater resources. In response, the U.S. Geological Survey (USGS), in collaboration with the University of Guam's Water and Environmental Research Institute of the Western Pacific (WERI) and with funding from the U.S. Marine Corps (USMC), is conducting a 3.5-year study to advance understanding of regional groundwater dynamics in the Northern Guam Lens Aquifer, provide a new estimate of groundwater recharge, and develop a numerical groundwater flow and transport model for northern Guam. Results of the study, including two USGS reports and a well database, will provide more reliable evaluations of the potential effects of groundwater production and help guide sustainable management of this critical resource.

Fact Sheet↗

Improving scientific communication through the use of U.S. Geological Survey Video Podcasts

It is crucial that scientist find innovative ways of effectively communicating research to resource managers, public officials, and the general public. New technologies, such as video podcasts, are being used as an outreach tool to communicate results from the U.S Geological Survey (USGS) National Water-Quality Assessment (NAWQA) program. The purpose of these podcasts is to summarize scientific research and methods from the NAWQA program. Video podcasts are audio podcasts that incorporate video clips to illustrate ideas presented in simple, concise language with brief 3 to 5-minute films. The process of creating concise podcast messages expands the potential audience for communicating research findings, but the production of video podcasts requires adequate allocation of time and resources. Audience responses to NAWQA podcasts thus far indicate that video is an effective means of sharing scientific information with a broader audience.

Conference Paper↗