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Trace metals and major and rare earth elements in cuttings from five high-temperature wells in the northwest region of The Geysers, California, vapor-dominated geothermal system

Temperatures within the main vapor-dominated steam reservoir at The Geysers geothermal field generally are in the range 238°C to 244°C. A few deep wells in the northwestern part of the field have penetrated beneath this reservoir into a second vapor-dominated reservoir where temperatures are >315°C, while vapor pressure remains nearly constant at about 35.9 bars (Walters et al., 1992). Vapor-dominated reservoirs generally are thought to operate like heat pipes in which steam formed near the base of the system convects upward (along with other gases, such as CC>2 and H2S), while liquid that has condensed from steam near the top of the reservoir counterflows downward (White et al., 1971). To the extent that this steam condensate carries H2S in solution, it may dissolve gold from the surrounding rock during the counterflow. Re-evaporation of the down-flowing condensate and precipitation of dissolved material might occur at the base of the upper reservoir where there is a relatively sharp increase in temperature while vapor pressure remains nearly constant. In addition, brine that once was present throughout the system (Moore, 1992) may have deposited a variety of ore minerals when and where boiling was vigorous during the transition from previous hot water-dominated to present-day vapor-dominated conditions. The investigation reported here was a geochemical reconnaissance survey looking for evidence of accumulation of Au and other metals in the transition zone between the two reservoirs. The petrology of the cuttings was not examined as part of the investigation.

Open-File Report↗

Additional and revised thermochemical data and computer code for WATEQ2: a computerized chemical model for trace and major element speciation and mineral equilibria of natural waters

A computerized chemical model, WATEQ2, has resulted from extensive additions to and revision of the WATEQ model of Truesdell and Jones (Truesdell, A. H., and Jones, B. F., 1974, WATEQ, a computer program for calculating chemical equilibria of natural waters: J. Res. U. S. Geol, Survey, v. 2, p. 233-274). The model building effort has necessitated searching the literature and selecting thermochemical data pertinent to the reactions added to the model. This supplementary report manes available the details of the reactions added to the model together with the selected thermochemical data and their sources. Also listed are details of program operation and a brief description of the output of the model. Appendices-contain a glossary of identifiers used in the PL/1 computer code, the complete PL/1 listing, and sample output from three water analyses used as test cases.

Water-Resources Investigations Report↗

Selected water-quality data for the Standard Mine, Gunnison County, Colorado, 2006-2007

Mine drainage and underground water samples were collected for analysis of inorganic solutes as part of a 1-year, hydrogeologic investigation of the Standard Mine and vicinity. The U.S. Environmental Protection Agency has listed the Standard Mine in the Elk Creek drainage near Crested Butte, Colorado, as a Superfund Site because discharge from the Standard Mine enters Elk Creek, contributing dissolved and suspended loads of zinc, cadmium, copper, and other metals to Coal Creek, which is the primary drinking-water supply for the town of Crested Butte. Water analyses are reported for mine-effluent samples from Levels 1 and 5 of the Standard Mine, underground samples from Levels 3 and 5 of the Standard Mine, mine effluent from an adit located on the Elk Lode, and two spring samples that emerged from waste-rock material below Level 5 of the Standard Mine and the adit located on the Elk Lode. Reported analyses include field parameters (pH, specific conductance, water temperature, dissolved oxygen, and redox potential) and major constituents and trace elements.

Open-File Report↗

Ground-water data for the Suck Creek area of Walden Ridge, southern Cumberland Plateau, Marion County, Tennessee

An investigation was made of the ground-water resources of the Suck Creek area, Marion County, Tennessee, 1990-91. Suck Creek is located on the Walden Ridge section of the Cumberland Plateau, and is about 16 miles northwest of Chattanooga. Eight wells were drilled into bedrock of Pennsylvania age. Drilling sites were chosen at or near fracture traces. Yields of the eight wells ranged from less than 1 to as much as 80 gallons of water per minute. Three wells had yields of 50 gallons per minute or more; two of these had estimated yields of 75 to 80 gallons per minute. These three wells produced water from a well- developed fracture within the Sewanee Conglomerate. Specific capacities for these three wells were 1.1, 1.3, 2.2 gallons per minute per foot of drawdown. Samples of water from six test wells and three domestic wells were analyzed for major inorganic constituents, nurients, major metals, trace elements, and bacteria. In addition, water samples from two of the test wells were analyzed for volatile organic compounds and scanned for the presence of semi-volatile organic compounds. Iron exceeded 300 micrograms per liter in five of the nine samples, and manganese exceeded 50 micrograms per liter in seven of the nine water samples. Toluene, a volatile organic compound, was detected in a concentration slightly above the reporting level; no other volatile organic compounds were detected.

Tennessee↗

Stratigraphic framework of Cambrian and Ordovician rocks in the Appalachian Basin from Sequatchie County, Tennessee through eastern Kentucky, to Mingo County, West Virginia

Cross section H-H' is the seventh in a series of restored cross sections constructed by the lead author to show the stratigraphic framework of Cambrian and Ordovician rocks in the Appalachian basin from Pennsylvania to Tennessee. The sections show complexly intertongued carbonate and siliciclastic lithofacies, marked thickness variations, key marker horizons, unconformities, stratigraphic nomenclature of the Cambrian and Ordovician sequence, and major faults that offset Proterozoic basement and overlying lower Paleozoic rocks. Several of the drill holes along the cross section have yielded a variety of whole and (or) fragmented conodont elements. The identifiable conodonts are used to differentiate strata of Late Cambrian, Early Ordovician, and Middle Ordovician age, and their conodont color alteration index (CAI) values are used to establish the thermal maturity of the sequence. Previous cross sections in this series are G-G', F-F', E-E', D-D', C-C', and B-B'. Many of these cross sections (B-B', C-C', D-D', and G-G') have been improved with the addition of gamma-ray log traces, converted to digital images, and made accessible on the Web.

Kentucky, Tennessee, Virginia, West Virginia↗

Reconnaissance of the shallow-unconfined aquifer in Salt Lake Valley, Utah

The shallow-unconfined aquifer in Salt Lake (Jordan) Valley, Utah, seldom is used for domestic or industrial purposes because it yields water slowly and is readily contaminated. The water in the aquifer, however, can flood basements and is a potential source of contamination to other water supplies. In about one-half of the valley, water in the shallow-unconfined aquifer is less than 10 feet below land surface. The general direction of flow in the shallow aquifer is toward the Jordan River. Water levels in the north part of the valley and along the Jordan River are highest in March or April and in the south part of the valley are highest in late summer. The smallest concentrations of dissolved solids in water from wells along the east side of the valley, and the greatest concentrations are in the northwest part of the valley near the Great Salt Lake. Large dissolved-solids concentrations are found near some landfills and tailings areas. Nitrate-nitrogen concentrations ranged from less than 0.1 to 86 milligrams per liter and nitrate-nitrogen concentrations from less than 0.02 to 0.85 milligram per liter. Some of the largest nitrate-nitrogen concentrations were found in water wells near animal pens. The greatest concentrations of trace elements generally came from wells near landfills and tailings area. The greatest measured concentration of cadmium was 200 microgram per liter, of mercury 0.1 microgram per liter, of lead 46 micrograms per liter, of iron 37,000 micrograms per liter and of arsenic 360 micrograms per liter. Synthetic organic chemicals were found in water from several wells. The greatest measured concentration of benzene was 400 micrograms per liter, of phenol 660 micrograms per liter, of 1,1 dichloroethane 20 micrograms per liter, of tichloroethylene 8 micrograms per liter , and of chloroethylene, 11 micrograms per liter. The greatest concentrations were in water from wells near landfills. (USGS)

Water-Resources Investigations Report↗

Ground-water quality near an inactive landfill and sludge-spreading area, Tallahassee, Florida

Ground-water quality of a 120-acre area encompassing an inactive landfill southwest of Tallahassee, Florida, was assessed by installing and sampling 21 monitoring wells. Sludge from a municipal sewage-treatment plant was also applied to the land surface near the landfill site. Water samples were collected from the 21 monitoring wells from June 1987 through September 1990 and analyzed for concentrations of major ions, nitrogen species, trace metals, field measurements, and more than 140 organic constituents. Water quality in the Upper Floridan aquifer at the study site was compared to background water quality in other areas of Leon County. Ground-water quality of the study site was evaluated by the location of wells sampled in relation to the landfill and the sludge-spreading areas. Results of nonparametric statistical analysis indicated that potassium and nitrite plus nitrate as nitrogen concentrations in water samples from wells completed in the Upper Floridan aquifer at the study site were significantly different at the 5 percent probability level from those in samples from background wells completed in this aquifer in Leon County. Median potassium concentrations were 0.4 mg/L (milligrams per liter) in water from wells at the study site and 0.7 mg/L in water from background wells in Leon County. Median nitrite plus nitrate concentrations were 6.48 mg/L in water samples from wells at the study site and 0.51 mg/L in water samples from background wells. Graphical comparison of the water quality characteristics in water from six categories of wells; upgradient, landfill, adjacent to the landfill, downgradient onsite, downgradient offsite, and background Leon County, indicated that sodium, bicarbonate, sulfate, iron, manganese, and dissolved solids concentrations and specific conductance values were highest within the landfill. Upgradient and downgradient well categories include wells in areas affected by sludge spreading. Localized reducing conditions were indicated in a downgradient area by median iron concentrations of 930 and 30 ug/L (micrograms per liter) in samples from wells only 5 feet apart. Nitrite plus nitrate concentrations were lowest in water from wells in the landfill compared to water from the other categories. Concentrations of most trace elements and organic compounds were mostly below detection limits, although State maximum contaminant levels of 1 ug/L for benzene and vinyl chloride and 3 ug/L for tetrachloroethene were exceeded in 14 samples. Concentrations of sodium, potassium, chloride, sulfate, nitrite plus nitrate, total organic and ammonia nitrogen, and ammonia nitrogen in ground water were statistically analyzed in areas affected by sludge-spreading and other areas. Only nitrite plus nitrate and chloride concentrations were significantly different between the two areas. Median nitrite plus nitrate and chloride concentrations in sludge-spreading areas were 6.9 mg/L and 2.9 mg/L, respectively, compared to 1.1 mg/L and 1.8 mg/L in other areas.

Florida↗

Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California: 2014

Trace-metal concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica ), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer (km) south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay, Calif. This report includes the data collected by U.S. Geological Survey (USGS) scientists for the period January 2014 to December 2014. These append to long-term datasets extending back to 1974, and serve as the basis for the City of Palo Alto’s Near-Field Receiving Water Monitoring Program, initiated in 1994. Following significant reductions in the late 1980s, silver (Ag) and copper (Cu) concentrations in sediment and M. petalum appear to have stabilized. Data for other metals, including chromium (Cr), mercury (Hg), nickel (Ni), selenium (Se), and zinc (Zn), have been collected since 1994. Over this period, concentrations of these elements have remained relatively constant, aside from seasonal variation that is common to all elements. In 2014, concentrations of Ag and Cu in M. petalum varied seasonally in response to a combination of site-specific metal exposures and annual growth and reproduction, as reported previously. Seasonal patterns for other elements, including Cr, Ni, Zn, Hg, and Se, were generally similar in timing and magnitude as those for Ag and Cu. In M. petalum , all observed elements showed annual maxima in January–February and minima in April, except for Zn, which was lowest in December. In sediments, annual maxima also occurred in January–February, and minima were measured in June and September. In 2014, metal concentrations in both sediments and clam tissue were among the lowest on record. This record suggests that regional-scale factors now largely control sedimentary and bioavailable concentrations of Ag and Cu, as well as other elements of regulatory interest, at the Palo Alto site. Analyses of the benthic community structure of a mudflat in South San Francisco Bay over a 40-year period show that changes in the community have occurred concurrent with reduced concentrations of metals in the sediment and in the tissues of the biosentinel clam, M. petalum , from the same area. Analysis of M. petalum shows increases in reproductive activity concurrent with the decline in metal concentrations in the tissues of this organism. Reproductive activity is presently stable (2014), with almost all animals initiating reproduction in the fall and spawning the following spring. The entire infaunal community has shifted from being dominated by several opportunistic species to a community where the species are more similar in abundance, a pattern that indicates a more stable community that is subjected to fewer stressors. In addition, two of the opportunistic species ( Ampelisca abdita and Streblospio benedicti ) that brood their young and live on the surface of the sediment in tubes have shown a continual decline in dominance coincident with the decline in metals; both species had short-lived rebounds in abundance in 2008, 2009, and 2010. Heteromastus filiformis (a subsurface polychaete worm that lives in the sediment, consumes sediment and organic particles residing in the sediment, and reproduces by laying its eggs on or in the sediment) showed a concurrent increase in dominance and, in the last several years before 2008, showed a stable population. H. filiformis abundance increased slightly in 2011–2012 and returned to pre-2011 numbers in 2014. An unidentified disturbance occurred on the mudflat in early 2008 that resulted in the loss of the benthic animals, except for deep-dwelling animals like Macoma petalum . However, within two months of this event animals returned to the mudflat. The resilience of the community suggested that the disturbance was not due to a persistent toxin or to anoxia. The reproductive mode of most species present in 2014 is reflective of species that were available either as pelagic larvae or as mobile adults. Although oviparous species were lower in number in this group, the authors hypothesize that these species will return slowly as more species move back into the area. The use of functional ecology was highlighted in the 2014 benthic community data, which showed that the animals that have now returned to the mudflat are those that can respond successfully to a physical, nontoxic disturbance. Today, community data show a mix of species that consume the sediment, or filter feed, have pelagic larvae that must survive landing on the sediment, and those that brood their young. USGS scientists view the 2008 disturbance event as a response by the infaunal community to an episodic natural stressor (possibly sediment accretion or a pulse of freshwater), in contrast to the long-term recovery from metal contamination. We will compare this recovery to the long-term recovery observed after the 1970’s when the decline in sediment pollutants was the dominating factor.

California↗

Near-field receiving water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California; 2015

Trace-metal concentrations in sediment and in the clam Macoma petalum (formerly reported as Macoma balthica ), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in South San Francisco Bay, California. This report includes data collected by U.S. Geological Survey (USGS) scientists for the period from January 2015 to December 2015. These data are appended to long-term datasets extending back to 1974, and serve as the basis for the City of Palo Alto’s Near-Field Receiving Water Monitoring Program, initiated in 1994. Following significant reductions in the late 1980s, silver (Ag) and copper (Cu) concentrations in sediment and M. petalum appear to have stabilized. Data for other metals, including chromium (Cr), mercury (Hg), nickel (Ni), selenium (Se), and zinc (Zn), have been collected since 1994. Over this period, concentrations of these elements have remained relatively constant, aside from seasonal variation that is common to all elements. In 2015, concentrations of Ag and Cu in M. petalum varied seasonally in response to a combination of site-specific metal exposures and annual growth and reproduction, as reported previously. Seasonal patterns for other elements, including Cr, Ni, Zn, Hg, and Se, were generally similar in timing and magnitude as those for Ag and Cu. In M. petalum , all observed elements showed annual maxima in January–February and minima in April, except for Zn, which was lowest in December. In sediments, annual maxima also occurred in January–February, and minima were measured in June and September. In 2015, metal concentrations in both sediments and clam tissue were among the lowest on record. This record suggests that regional-scale factors now largely control sedimentary and bioavailable concentrations of Ag and Cu, as well as other elements of regulatory interest, at the Palo Alto site. Analyses of the benthic community structure at the same mudflat over a 40-year period show that changes in the community have occurred concurrent with reduced concentrations of metals in the sediment and in the tissues of the biosentinel clam, M. petalum , from the same area. Analysis of M. petalum shows increases in reproductive activity concurrent with the decline in metal concentrations in the tissues of this organism. Reproductive activity is presently stable (2015), with almost all animals initiating reproduction in the fall and spawning the following spring. The entire infaunal community has shifted from being dominated by several opportunistic species to a community where the species are more similar in abundance, a pattern that indicates a more stable community that is subjected to fewer stressors. In addition, two of the opportunistic species ( Ampelisca abdita and Streblospio benedicti ) that brood their young and live on the surface of the sediment in tubes have shown a continual decline in dominance coincident with the decline in metals; both species had short-lived rebounds in abundance in 2008, 2009, and 2010 and showed signs of increasing abundance in 2015. Heteromastus filiformis (a subsurface polychaete worm that lives in the sediment, consumes sediment and organic particles residing in the sediment, and reproduces by laying its eggs on or in the sediment) showed an increase in dominance, concurrent with the decrease in Ag and Cu concentrations, and in the last several years before 2008, showed a stable population. H. filiformis abundance increased slightly in 2011–2012 and returned to pre-2011 abundance in 2015. An unidentified disturbance occurred on the mudflat in early 2008 that resulted in the loss of the benthic animals, except for deep-dwelling animals like M. petalum . However, within two months of this event animals returned to the mudflat. The resilience of the community suggested that the disturbance was not due to a persistent toxin or to anoxia. The reproductive mode of most species present in 2015 is reflective of species that were available either as pelagic larvae or as mobile adults. Although oviparous (live-birth) species were lower in number in this group, the authors hypothesize that these species will return slowly as more species move back into the area. The use of functional ecology was highlighted in the 2015 benthic community data, which showed that the animals that have now returned to the mudflat are those that can respond successfully to a physical, nontoxic disturbance. Today, community data show a mix of species that consume the sediment, or filter feed, have pelagic larvae that must survive landing on the sediment, and those that brood their young. USGS scientists view the 2008 disturbance event as a response by the infaunal community to an episodic natural stressor (possibly sediment accretion or a pulse of freshwater), in contrast to the long-term recovery from metal contamination. We will compare this recovery to the long-term recovery observed after the 1970s when the decline in sediment pollutants was the dominating factor.

California↗

Hydrological, geological, and biological site characterization of breccia pipe uranium deposits in Northern Arizona

On July 21, 2009, U.S. Secretary of the Interior Ken Salazar proposed a two-year withdrawal of about 1 million acres of Federal land near the Grand Canyon from future mineral entry. These lands are contained in three parcels: two parcels on U.S. Bureau of Land Management land to the north of the Grand Canyon (North and East Segregation Areas) and one on the Kaibab National Forest south of the Grand Canyon (South Segregation Area). The purpose of the two-year withdrawal is to examine the potential effects of restricting these areas from new mine development for the next 20 years. This proposed withdrawal initiated a period of study during which the effects of the withdrawal must be evaluated. At the direction of the Secretary, the U.S. Geological Survey began a series of short-term studies designed to develop additional information about the possible effects of uranium mining on the natural resources of the region. Dissolved uranium and other major, minor, and trace elements occur naturally in groundwater as the result of precipitation infiltrating from the surface to water-bearing zones and, presumably, to underlying regional aquifers. Discharges from these aquifers occur as seeps and springs throughout the region and provide valuable habitat and water sources for plants and animals. Uranium mining within the watershed may increase the amount of radioactive materials and heavy metals in the surface water and groundwater flowing into Grand Canyon National Park and the Colorado River, and deep mining activities may increase mobilization of uranium through the rock strata into the aquifers. In addition, waste rock and ore from mined areas may be transported away from the mines by wind and runoff.

Scientific Investigations Report↗

Phytoplankton bloom dynamics in coastal ecosystems: A review with some general lessons from sustained investigation of San Francisco Bay, California

Phytoplankton blooms are prominent features of biological variability in shallow coastal ecosystems such as estuaries, lagoons, bays, and tidal rivers. Long-term observation and research in San Francisco Bay illustrates some patterns of phytoplankton spatial and temporal variability and the underlying mechanisms of this variability. Blooms are events of rapid production and accumulation of phytoplankton biomass that are usually responses to changing physical forcings originating in the coastal ocean (e.g., tides), the atmosphere (wind), or on the land surface (precipitation and river runoff). These physical forcings have different timescales of variability, so algal blooms can be short-term episodic events, recurrent seasonal phenomena, or rare events associated with exceptional climatic or hydrologic conditions. The biogeochemical role of phytoplankton primary production is to transform and incorporate reactive inorganic elements into organic forms, and these transformations are rapid and lead to measurable geochemical change during blooms. Examples include the depletion of inorganic nutrients (N, P, Si), supersaturation of oxygen and removal of carbon dioxide, shifts in the isotopic composition of reactive elements (C, N), production of climatically active trace gases (methyl bromide, dimethylsulfide), changes in the chemical form and toxicity of trace metals (As, Cd, Ni, Zn), changes in the biochemical composition and reactivity of the suspended particulate matter, and synthesis of organic matter required for the reproduction and growth of heterotrophs, including bacteria, zooplankton, and benthic consumer animals. Some classes of phytoplankton play special roles in the cycling of elements or synthesis of specific organic molecules, but we have only rudimentary understanding of the forces that select for and promote blooms of these species. Mounting evidence suggests that the natural cycles of bloom variability are being altered on a global scale by human activities including the input of toxic contaminants and nutrients, manipulation of river flows, and translocation of species. This hypothesis will be a key component of our effort to understand global change at the land-sea interface. Pursuit of this hypothesis will require creative approaches for distinguishing natural and anthropogenic sources of phytoplankton population variability, as well as recognition that the modes of human disturbance of coastal bloom cycles operate interactively and cannot be studied as isolated processes.

California↗

Reconnaissance for determining effects of land use and surficial geology on concentrations of selected elements on streambed materials from the coal-mining region, southwestern Indiana, October 1979 to March 1980

Streambed materials were collected in October 1979 from 69 watersheds in Southwest Indiana having predominantly forested, agricultural, reclaimed, and unreclaimed mined land use to determine whether concentrations of sorbed and acid-soluble metals and trace elements were affected by land use and surficial geology. Analysis of variance indicated that 10% or more of the total variation in aluminum, arsenic, cobalt, iron, nickel, selenium, and zinc concentrations on streambed materials was accounted for by differences in land use. Concentrations of aluminum, cobalt, iron, nickel, selenium, and zinc on streambed materials smaller than 0.062-millimeter from mined watersheds were significantly greater than the concentrations of these elements on streambed materials from agricultural and forested watersheds. The greater concentrations of these elements on streambed materials are due to (1) their concentrations in mine drainage and their subsequent absorption and (or) copecipitation with the oxides and hydroxides of aluminum and iron and (2) their concentrations in coal and pyritic material in streambed materials.

Indiana↗

Trace elements in bed sediments of the San Joaquin River and its tributary streams, California, 1985

Bed sediments were sampled at 24 sites on the San Joaquin River, California and its tributaries in October 1985 to assess the distribution of trace elements and factors affecting their concentrations. The proportion of less than 62-micrometer sediment was significantly (alpha=0.05) correlated with organic-carbon concentrations. Bed sediments from tributaries originating in the Sierra Nevada were much coarser than sediments in streams draining the Coast Range and western valley. Selenium concentrations in water have been measured. Interrelations among trace elements were examined using principal component analysis. 57% of the variance was accounted for in the first two principal components, which together show a distinct separation between sites dominated by Coast Range sediments and sites dominated by Sierra Nevada sediments. The third and fourth components accounted for 21% of the variance and distinguished the mixed-source sediments of the intermittent upper San Joaquin River from other parts of the river system. Generally, elements in bed sediments of the San Joaquin River and its tributaries were similar in concentration to elements in San Joaquin Valley soils, and concentrations were far below hazardous waste criteria. Concentrations were lower than in sediments from some polluted urban rivers and water more comparable to other rural agricultural rivers. (USGS)

Water-Resources Investigations Report↗

Water-quality assessment of the Central Arizona Basins, Arizona and northern Mexico – Environmental setting and overview of water quality

The Central Arizona Basins study area in central and southern Arizona and northern Mexico is one of 60 study units that are part of the U.S. Geological Survey's National Water-Quality Assessment program. The purpose of this report is to describe the physical, chemical, and environmental characteristics that may affect water quality in the Central Arizona Basins study area and present an overview of water quality. Covering 34,700 square miles, the study area is characterized by generally north to northwestward-trending mountain ranges separated by broad, gently sloping alluvial valleys. Most of the perennial rivers and streams are in the northern part of the study area. Rivers and streams in the south are predominantly intermittent or ephemeral and flow in response to precipitation such as summer thunderstorms. Effluent-dependent streams do provide perennial flow in some reaches. The major aquifers in the study area are in the basin-fill deposits that may be as much as 12,000 feet thick. The 1990 population in the study area was about 3.45 million, and about 61 percent of the total was in Maricopa County (Phoenix and surrounding cities). Extensive population growth over the past decade has resulted in a twofold increase in urban land areas and increased municipal water use; however, agriculture remains the major water use. Seventy-three percent of all water with drawn in the study area during 1990 was used for agricultural purposes. The largest rivers in the study area-the Gila, Salt, and Verde-are perennial near their headwaters but become intermittent downstream because of impoundments and artificial diversions. As a result, the Central Arizona Basins study area is unique compared to less arid basins because the mean surface-water outflow is only 528 cubic feet per second from a total drainage area of 49,650 square miles. Peak flows in the northern part of the study area are the result of snowmelt runoff; whereas, summer thunderstorms account for the peak flows in the southern part. Ground water is the primary water supply in most of Arizona and the only source of drinking water used by communities in the southern half of the study area. Years of overpumping have caused water tables in basin fill to drop below once-perennial streams leaving streambeds dry, water too deep to pump economically, pumping of poorer quality water with depth, and earth fissures resulting from subsidence after dewatering of sediments. Natural processes-such as leaching of trace elements and major ions from geologic formations-and human activities-such as mining, agriculture, and urban development-have major effects on the quality of surface-water and ground-water resources in the Central Arizona Basins study area. Surface-water quality standards in Arizona are based on the designated use of the water such as full or partial body contact, fish consumption, aquatic and wildlife uses, and agriculture. Maintaining the biological integrity (health) of surface waters in Arizona is an important part of ensuring that these waters are suitable for designated uses. Important water-quality issues for surface water that are somewhat unique to Arizona include: (1) streamflows and riparian environments sustained by effluent from municipal wastewater-treatment plants that contains high concentrations of nutrients, potentially toxic trace elements and organic compounds, and fecal bacteria; (2) industrial, mining, agricultural, and municipal sources of contamination from Mexico; and (3) unpredictable high flows from major summer thunder storms causing stream-channel changes; high suspended-sediment concentrations and loads; sewage overflows; and breaching, erosion, and washout of landfills and mining operations. The quality of water in aquifers that are protected for drinking- water use is subject to standards that are in most cases equal to or more stringent than the primary drinking-water regulations of the U.S. Environmental Protection Agency. The general che

Arizona↗

Seasonal fluctuations of water quality in San Francisco Bay during the first three years of the regional monitoring program, 1993-1995

The 1995 Regional Monitoring Program (RMP) Annual Report includes monitoring results from the Base Program, Pilot and Special Studies, and summary and perspective articles contributed by RMP investigators and other scientists. The purpose of the RMP is to provide information on the status and trends of contamination in San Francisco Estuary water, sediment, and bivalve tissue, and to assess the potential for biological effects from exposure to those contaminants. The objectives, background, and rationale for the RMP are described in the Introduction (Chapter 1). The 1995 RMP Base Program was essentially the same as in 1994. Water monitoring was conducted in February, April, and August at 24 stations throughout the Estuary. Aquatic bioassays were conducted in February and August at 13 of those stations. Sediment monitoring was conducted in February and August at all 24 stations, and sediment bioassays were conducted at 12 of those stations. Bioaccumulation of contaminants by transplanted bivalves was monitored at 15 stations during two 90 day sampling periods: January to April and July to September. Pilot Studies on benthic fauna and tidal wetlands were conducted and Special Studies on trends in trace elements and development of sediment indicators were also included.

California↗

Status of groundwater quality in the California Desert Region, 2006-2008: California GAMA Priority Basin Project

Groundwater quality in six areas in the California Desert Region (Owens, Antelope, Mojave, Coachella, Colorado River, and Indian Wells) was investigated as part of the Priority Basin Project of the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The GAMA Priority Basin Project is being conducted by the California State Water Resources Control Board in collaboration with the U.S. Geological Survey (USGS) and the Lawrence Livermore National Laboratory. The six Desert studies were designed to provide a spatially unbiased assessment of the quality of untreated groundwater in parts of the Desert and the Basin and Range hydrogeologic provinces, as well as a statistically consistent basis for comparing groundwater quality to other areas in California and across the Nation. Samples were collected by the USGS from September 2006 through April 2008 from 253 wells in Imperial, Inyo, Kern, Los Angeles, Mono, Riverside, and San Bernardino Counties. Two-hundred wells were selected using a spatially distributed, randomized grid-based method to provide a spatially unbiased representation of the study areas (grid wells), and fifty-three wells were sampled to provide additional insight into groundwater conditions (additional wells). The status of the current quality of the groundwater resource was assessed based on data from samples analyzed for volatile organic compounds (VOCs), pesticides, and inorganic constituents such as major ions and trace elements. Water-quality data from the California Department of Public Health (CDPH) database also were incorporated in the assessment. The status assessment is intended to characterize the quality of untreated groundwater resources within the primary aquifer systems of the Desert Region, not the treated drinking water delivered to consumers by water purveyors. The primary aquifer systems (hereinafter, primary aquifers) in the six Desert areas are defined as that part of the aquifer corresponding to the perforation intervals of wells listed in the CDPH database. Relative-concentrations (sample concentration divided by the benchmark concentration) were used as the primary metric for evaluating groundwater quality for those constituents that have Federal and (or) California benchmarks. A relative-concentration (RC) greater than (>) 1.0 indicates a concentration above a benchmark, and an RC less than or equal to (≤) 1.0 indicates a concentration equal to or below a benchmark. Organic and special-interest constituent RCs were classified as “low” (RC ≤ 0.1), “moderate” (0.1 < RC ≤ 1.0), or “high” (RC > 1.0). Inorganic constituent RCs were classified as “low” (RC ≤ 0.5), “moderate” (0.5 < RC ≤ 1.0), or “high” (RC > 1.0). A lower threshold value RC was used to distinguish between low and moderate RCs for organic constituents because these constituents are generally less prevalent and have smaller RCs than inorganic constituents. Aquifer-scale proportion was used as the primary metric for evaluating regional-scale groundwater quality. High aquifer-scale proportion was defined as the percentage of the area of the primary aquifers with an RC greater than 1.0 for a particular constituent or class of constituents; percentage is based on an areal rather than a volumetric basis. Moderate and low aquifer-scale proportions were defined as the percentage of the primary aquifers with moderate and low RCs, respectively. Two statistical approaches—grid-based and spatially weighted—were used to evaluate aquifer-scale proportions for individual constituents and classes of constituents. Grid-based and spatially weighted estimates were comparable in the Desert Region (within 90 percent confidence intervals). The status assessment determined that one or more inorganic constituents with health-based benchmarks had high RCs in 35.4 percent of the Desert Region’s primary aquifers, moderate RCs in 27.4 percent, and low RCs in 37.2 percent. The inorganic constituents with health-based benchmarks having the largest high aquifer-scale proportions were arsenic (17.8 percent), boron (11.4 percent), fluoride (8.9 percent), gross-alpha radioactivity (6.6 percent), molybdenum (5.7 percent), strontium (3.7 percent), vanadium (3.6 percent), uranium (3.2 percent), and perchlorate (2.4 percent). Inorganic constituents with non-health-based benchmarks were also detected at high RCs in 18.6 percent and at moderate RCs in 16.0 percent of the Desert Region’s primary aquifers. In contrast, organic constituents had high RCs in only 0.3 percent of the Desert Region’s primary aquifers, moderate in 2.0 percent, low in 48.0 percent, and were not detected in 49.7 percent of the primary aquifers in the Desert Region. Of 149 organic constituents analyzed for all six study areas, 42 constituents were detected. Six organic constituents, carbon tetrachloride, chloroform, 1,2-dichloropropane, dieldrin, 1,2-dichloroethane, and tetrachloroethene, were found at moderate RCs in one or more of the grid wells. One constituent, N -nitrosodimethylamine, a special-interest VOC, was detected at a high RC in one well. Thirty-nine organic constituents were detected only at low concentrations. Three organic constituents were frequently detected (in more than 10 percent of samples from grid wells): chloroform, simazine, and deethylatrazine.

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Reconnaissance-level assessment of water quality near Flandreau, South Dakota

This report presents water-quality data that have been compiled and collected for a reconnaissance-level assessment of water quality near Flandreau, South Dakota. The investigation was initiated as a cooperative effort between the U.S. Geological Survey and the Flandreau Santee Sioux Tribe. Members of the Flandreau Santee Sioux Tribe have expressed concern that Tribal members residing in the city of Flandreau experience more health problems than the general population in the surrounding area. Prior to December 2000, water for the city of Flandreau was supplied by wells completed in the Big Sioux aquifer within the city of Flandreau. After December 2000, water for the city of Flandreau was supplied by the Big Sioux Community Water System from wells completed in the Big Sioux aquifer along the Big Sioux River near Egan, about 8 river miles downstream of Flandreau. There is some concern that the public and private water supplies provided by wells completed in the Big Sioux aquifer near the Big Sioux River may contain chemicals that contribute to the health problems. Data compiled from other investigations provide information about the water quality of the Big Sioux River and the Big Sioux aquifer in the Flandreau area from 1978 through 2001. The median, minimum, and maximum values are presented for fecal bacteria, nitrate, arsenic, and atrazine. Nitrate concentrations of water from Flandreau public-supply wells occasionally exceeded the Maximum Contaminant Level of 10 milligrams per liter for public drinking water. For this study, untreated-water samples were collected from the Big Sioux River in Flandreau and from five wells completed in the Big Sioux aquifer in and near Flandreau. Treated-water samples from the Big Sioux Community Water System were collected at a site about midway between the treatment facility near Egan and the city of Flandreau. The first round of sampling occurred during July 9-12, 2001, and the second round of sampling occurred during August 20-27, 2001. Samples were analyzed for a broad range of compounds, including major ions, nutrients, trace elements, pesticides, antibiotics, and organic wastewater compounds, some of which might cause adverse health effects after long-term exposure. Samples collected on August 27, 2001, from the Big Sioux River also were analyzed for human pharmaceutical compounds. The quality of the water in the Big Sioux River and the Big Sioux aquifer in the Flandreau area cannot be thoroughly characterized with the limited number of samples collected within a 2-month period, and for many analytes, neither drinking-water standards nor associations with adverse health effects have been established. Concentrations of some selected analytes were less than U.S. Environmental Protection Agency drinking-water standards at the time of the sampling, and concentrations of most organic compounds were less than the respective method reporting levels for most of the samples.

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Near-field receiving-water monitoring of trace metals and a benthic community near the Palo Alto Regional Water Quality Control Plant in south San Francisco Bay, California—2019

Trace-metal concentrations in sediment and in the clam Limecola petalum (formerly reported as Macoma balthica and M. petalum ), clam reproductive activity, and benthic macroinvertebrate community structure were investigated in a mudflat 1 kilometer south of the discharge of the Palo Alto Regional Water Quality Control Plant (PARWQCP) in south San Francisco Bay, Calif. This report includes the data collected by the U.S. Geological Survey (USGS) for the period January 2019 to December 2019. These data append to long-term datasets extending back to 1974. A major focus of the report is an integrated description of the 2019 data within the context of the longer, multidecadal dataset. This dataset supports the City of Palo Alto’s Near-Field Receiving-Water Monitoring Program, initiated in 1994. Significant reductions in silver and copper contamination occurred at the site in the 1980s following the implementation by PARWQCP of advanced wastewater treatment and source control measures. Since the 1990s, concentrations of these elements in surface sediments have continued to decrease, although more slowly. Silver appears to have stabilized at concentrations about twice the regional background concentration. Presently, sediment copper concentrations appear to be near the regional background level. Over the same period (1994–2019), sedimentary iron and zinc also exhibited modest declines. Sedimentary aluminum, chromium, mercury, nickel, and selenium have not exhibited any trend. Since 1994, concentrations of silver and copper in L. petalum have varied seasonally, apparently in response to a combination of site-specific metal exposures and cyclic growth and reproduction, as reported previously. Seasonal patterns for other elements, including chromium, mercury, nickel, selenium, and zinc, were generally similar in timing and magnitude as those for silver and copper. The annual growth and reproductive cycle explained a small amount of the variance in annual silver and zinc tissue metal concentrations. However, interannual trends are not apparent for any element. Biological effects of elevated silver and copper contamination at the Palo Alto site have been interpreted from data collected during and after the recession of these contaminants. Concentrations of both elements in the soft tissues of L. petalum declined with sedimentary copper and silver. This pattern was associated with changes in the reproductive activity of L. petalum , as well as the structure of the benthic invertebrate community. Reproductive activity of L. petalum increased as metal concentrations in L. petalum declined and presently is stable with almost all animals initiating reproduction in the fall and spawning the following spring. Analyses of the benthic community structure indicate that the infaunal invertebrate community has shifted from one dominated by several opportunistic species when silver and copper exposures were highest to one in which the species abundance is more evenly distributed, a pattern that indicates a more stable community that is subjected to fewer stressors. Importantly, this long-term change is unrelated to other metals and other measured environmental factors, including salinity and sediment composition. In addition, two of the opportunistic species ( Ampelisca abdita and Streblospio benedicti ) that brood their young and live on the surface of the sediment in tubes have shown a continual decline in dominance coincident with the decline in metals. Both species had short-lived rebounds in abundance in 2008, 2009, and 2010 and showed signs of increasing abundance in 2019. Heteromastus filiformis (a subsurface polychaete worm that lives in the sediment, consumes sediment and organic particles residing in the sediment, and reproduces by laying its eggs on or in the sediment) showed a concurrent increase in dominance and, in the last several years before 2008, showed a stable population. H. filiformis abundance increased slightly in 2011–2012 and returned to pre-2011 numbers in 2019. An unidentified disturbance occurred on the mudflat in early 2008 that resulted in the loss of the benthic animals, except for deep-dwelling animals like L. petalum . However, within two months of this event, animals returned to the mudflat. The resilience of the community suggested that the disturbance was not caused by a persistent toxin or anoxia. The reproductive mode of most species that were present in 2019 was indicative of species that were available either as pelagic larvae or as mobile adults. Although oviparous species were lower in number in this group, the authors hypothesize that these species will return slowly as more species move back into the area. The use of functional ecology was highlighted in the 2019 benthic community data, which showed that the animals that have now returned to the mudflat are those that can respond successfully to a physical, nontoxic disturbance. Today, community data show a mix of species that consume the sediment, or filter feed, those that have pelagic larvae that must survive landing on the sediment, and those that brood their young. USGS scientists view the 2008 disturbance event as a response by the infaunal community to an episodic natural stressor (possibly sediment accretion or a pulse of freshwater), in contrast to the long-term recovery from metal contamination. We will compare this recovery to the long-term recovery observed after the 1970s when the decline in sediment pollutants was the dominating factor.

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