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Signals of impending change

Society has an increasing awareness that there are finite limits to what we can expect the planet to absorb and still provide goods and services at current rates 1 . Both historical reconstructions and contemporary events continue to remind us that ecological regime changes are often abrupt rather than gradual. This reality motivates researchers who seek to discover leading indicators for impending ecosystem change. Berdugo et al . 2 report an important advance in our ability to anticipate the conversion of arid lands from self-organized, self-maintaining and productive ecosystems, to a state characterized by disorganization and low functionality. Such conversions have important implications for our understanding of ‘desertification’ — which is a shift from arid to desert-like conditions. Theoretical studies have suggested that patterns in the patchiness of vegetation might indicate how close a system is to making an abrupt change to desert-like conditions 3 , 4 , 5 . Empirical studies, however, have tended to show instead that simply the total cover of vegetation, rather than its arrangement, often foretells the state of the system 4 , 5 , 6 , 7 , 8 , 9 . Berdugo et al . 2 combine these competing ideas into one integrated perspective. They show how major environmental drivers, such as aridity, influence both vegetation cover and patchiness, as well as where self-organizing, stabilizing forces in the vegetation are likely to be found.

Nature Ecology & Evolution

Chesapeake Bay dissolved oxygen criterion attainment deficit: Three decades of temporal and spatial patterns

Low dissolved oxygen (DO) conditions are a recurring issue in waters of Chesapeake Bay, with detrimental effects on aquatic living resources. The Chesapeake Bay Program partnership has developed criteria guidance supporting the definition of state water quality standards and associated assessment procedures for DO and other parameters, which provides a binary classification of attainment or impairment. Evaluating time series of these two outcomes alone, however, provides limited information on water quality change over time or space. Here we introduce an extension of the existing Chesapeake Bay water quality criterion assessment framework to quantify the amount of impairment shown by space-time exceedance of DO criterion (“attainment deficit”) for a specific tidal management unit (i.e., segment). We demonstrate the usefulness of this extended framework by applying it to Bay segments for each 3-year assessment period between 1985 and 2016. In general, the attainment deficit for the most recent period assessed (i.e., 2014–2016) is considerably worse for deep channel (DC; n = 10) segments than open water (OW; n = 92) and deep water (DW; n = 18) segments. Most subgroups – classified by designated uses, salinity zones, or tidal systems – show better (or similar) attainment status in 2014–2016 than their initial status (1985–1987). Some significant temporal trends (p < 0.1) were detected, presenting evidence on the recovery for portions of Chesapeake Bay with respect to DO criterion attainment. Significant, improving trends were observed in seven OW segments, four DW segments, and one DC segment over the 30 3-year assessment periods (1985–2016). Likewise, significant, improving trends were observed in 15 OW, five DW, and four DC segments over the recent 15 assessment periods (2000–2016). Subgroups showed mixed trends, with the Patuxent, Nanticoke, and Choptank Rivers experiencing significant, improving short-term (2000–2016) trends while Elizabeth experiencing a significant, degrading short-term trend. The general lack of significantly improving trends across the Bay suggests that further actions will be necessary to achieve full attainment of DO criterion. Insights revealed in this work are critical for understanding the dynamics of the Bay ecosystem and for further assessing the effectiveness of management initiatives aimed toward Bay restoration.

Maryland, Virginia

Yellowstone and the biology of time: Photographs across a century

Established in 1872, Yellowstone National Park is the oldest and one of the largest national parks in the world. In this remarkable book, scientists Mary Meagher and Douglas B. Houston present 100 sets of photographs that compare the Yellowstone of old with the park of today. Most of the photo sets include three pictures-not the usual two-with many of the original views dating back to the 1870s and 1880s. From the same photo points used by early photographers, Meagher and Houston rephotographed the scenes in the 1970s, and then, following the great fires of 1988, again in the 1990s. The result is an illuminating record of Yellowstone’s dynamic ecosystem and its changes over time. Through close analysis of the photos and reference to the vast amount of available data, Meagher and Houston describe changes in vegetation, growth of wildlife populations, the effect of beaver occupancy on wetland areas, and geothermal and elevational shifts. At the same time they point out the extent to which many sites have not changed-despite important switches in park policy and an increase in human activity. Yellowstone National Park has long been the focus of major ecological debates. Should managers allow wildfires to burn? Should the elk and bison populations be controlled? Are too many people visiting the park? Yellowstone And The Biology Of Time offers a wealth of information to help us answer these questions. A visual treasure, this book will be of value to scientists from various disciplines as well as to the many people who care about Yellowstone and other protected wilderness areas around the world.

Yellowstone National Park

Organochlorine compounds and current-use pesticides in snow and lake sediment in Rocky Mountain National Park, Colorado, and Glacier National Park, Montana, 2002-03

Organochlorine compounds and current-use pesticides were measured in snow and lake-sediment samples from Rocky Mountain National Park in Colorado and Glacier National Park in Montana to determine their occurrence and distribution in high-elevation aquatic ecosystems. The U.S. Geological Survey, in cooperation with the National Park Service, collected snow samples at eight sites in Rocky Mountain National Park and at eight sites in Glacier National Park during spring of 2002 and 2003 just prior to the start of snowmelt. Surface sediments were collected from 11 lakes in Rocky Mountain National Park and 10 lakes in Glacier National Park during summer months of 2002 and 2003. Samples were analyzed for organochlorine compounds by gas chromatography with electron-capture detection and current-use pesticides by gas chromatography with electron-impact mass spectrometry. A subset of samples was reanalyzed using a third instrumental technique (gas chromatography with electron-capture negative ion mass spectrometry) to verify detected concentrations in the initial analysis and to investigate the presence of additional compounds. For the snow samples, the pesticides most frequently detected were endosulfan, dacthal, and chlorothalonil, all of which are chlorinated pesticides that currently are registered for use in North America. Concentrations of these pesticides in snow were very low, ranging from 0.07 to 2.36 nanograms per liter. Of the historical-use pesticides, hexachlorobenzene, dieldrin, and trans -nonachlor were detected in snow but only in one sample each. Annual deposition rates of dacthal, endosulfan, and chlorothalonil were estimated at 0.7 to 3.0 micrograms per square meter. These estimates are likely biased low because they do not account for pesticide deposition during summer months. For the lake-sediment samples, DDE ( p,p’ -dichlorodiphenyldichoroethene) and DDD ( p,p’ -dichlorodiphenyldichoroethane) were the most frequently detected organochlorine compounds. DDE and DDD are degradation products of DDT ( p,p’ -dichlorodiphenyltrichloroethane), which is a well-documented, persistent organochlorine insecticide that has been banned from use in the United States since 1972. Detected concentrations were very low, ranging from 0.12 to 4.7 micrograms per kilogram, and probably pose little threat to aquatic organisms in park lakes. DDD and DDE concentrations in a sediment core from Mills Lake in Rocky Mountain National Park indicate that atmospheric deposition of DDT and possibly other banned organochlorine compounds to high-elevation parks has been in decline since the 1970s. Commonly detected current-use pesticides in lake sediments included dacthal and endosulfan sulfate, which ranged in concentrations from 0.11 to 0.26 micrograms per kilogram for dacthal and 0.12 to 1.2 micrograms per kilogram for endosulfan sulfate. Both compounds were found in nearly all the snow samples, confirming that some current-use pesticides entering high-elevation aquatic ecosystems through atmospheric deposition are accumulating in lake sediments and potentially in aquatic biota.

Colorado, Montana

Developing and testing temperature models for regulated systems: a case study on the Upper Delaware River

Water temperature is an important driver of many processes in riverine ecosystems. If reservoirs are present, their releases can greatly influence downstream water temperatures. Models are important tools in understanding the influence these releases may have on the thermal regimes of downstream rivers. In this study, we developed and tested a suite of models to predict river temperature at a location downstream of two reservoirs in the Upper Delaware River (USA), a section of river that is managed to support a world-class coldwater fishery. Three empirical models were tested, including a Generalized Least Squares Model with a cosine trend (GLScos), AutoRegressive Integrated Moving Average (ARIMA), and Artificial Neural Network (ANN). We also tested one mechanistic Heat Flux Model (HFM) that was based on energy gain and loss. Predictor variables used in model development included climate data (e.g., solar radiation, wind speed, etc.) collected from a nearby weather station and temperature and hydrologic data from upstream U.S. Geological Survey gages. Models were developed with a training dataset that consisted of data from 2008 to 2011; they were then independently validated with a test dataset from 2012. Model accuracy was evaluated using root mean square error (RMSE), Nash Sutcliffe efficiency (NSE), percent bias (PBIAS), and index of agreement (d) statistics. Model forecast success was evaluated using baseline-modified prime index of agreement (md) at the one, three, and five day predictions. All five models accurately predicted daily mean river temperature across the entire training dataset (RMSE = 0.58–1.311, NSE = 0.99–0.97, d = 0.98–0.99); ARIMA was most accurate (RMSE = 0.57, NSE = 0.99), but each model, other than ARIMA, showed short periods of under- or over-predicting observed warmer temperatures. For the training dataset, all models besides ARIMA had overestimation bias (PBIAS = −0.10 to −1.30). Validation analyses showed all models performed well; the HFM model was the most accurate compared other models (RMSE = 0.92, both NSE = 0.98, d = 0.99) and the ARIMA model was least accurate (RMSE = 2.06, NSE = 0.92, d = 0.98); however, all models had an overestimation bias (PBIAS = −4.1 to −10.20). Aside from the one day forecast ARIMA model (md = 0.53), all models forecasted fairly well at the one, three, and five day forecasts (md = 0.77–0.96). Overall, we were successful in developing models predicting daily mean temperature across a broad range of temperatures. These models, specifically the GLScos, ANN, and HFM, may serve as important tools for predicting conditions and managing thermal releases in regulated river systems such as the Delaware River. Further model development may be important in customizing predictions for particular biological or ecological needs, or for particular temporal or spatial scales.

Delaware, New York, Pennsylvania

Riparian methylmercury production increases riverine mercury flux and food web concentrations

The production and uptake of toxic methylmercury (MeHg) impacts aquatic ecosystems globally. Rivers can be dynamic and difficult systems to study for MeHg production and bioaccumulation, hence identifying sources of MeHg to these systems is both challenging and important for resource management within rivers and main-stem reservoirs. Riparian zones, which are known biogeochemical hotspots for MeHg production, are understudied as potential sources of MeHg to rivers. Here, we present a comprehensive quantification of the hydrologic and biogeochemical processes governing MeHg concentrations, loads, and bioaccumulation at 16 locations along 164 km of the agriculturally intensive Snake River (Idaho, Oregon USA) during summer baseflow conditions, with emphasis on riparian production of MeHg. Approximately one-third of the MeHg load of the Snake River could not be attributed to inflowing waters (upgradient, tributaries, or irrigation drains). Across the study reach, increases in MeHg loads in surface waters were significantly correlated with MeHg concentrations in riparian porewaters, suggesting riparian zones were likely an important source of MeHg to the Snake River. Across all locations, MeHg concentrations in surface waters positively correlated with MeHg concentrations in benthic snails and clams, supporting that riparian produced MeHg was assimilated into local aquatic food webs. This study contributes new insights into riparian MeHg production within rivers which can inform mitigation efforts to reduce MeHg bioaccumulation in fish.

Idaho, Oregon

Food web controls on mercury fluxes and fate in the Colorado River, Grand Canyon

Mercury (Hg) biomagnification in aquatic food webs is a global concern; yet, the ways species traits and interactions mediate these fluxes remain poorly understood. Few pathways dominated Hg flux in the Colorado River despite large spatial differences in food web complexity, and fluxes were mediated by one functional trait, predation resistance. New Zealand mudsnails are predator resistant and a trophic dead end for Hg in food webs we studied. Fishes preferred blackflies, which accounted for 56 to 80% of Hg flux to fishes, even where blackflies were rare. Food web properties, i.e., match/mismatch between insect production and fish consumption, governed amounts of Hg retained in the river versus exported to land. An experimental flood redistributed Hg fluxes in the simplified tailwater food web, but not in complex downstream food webs. Recognizing that species traits, species interactions, and disturbance mediate contaminant exposure can improve risk management of linked aquatic-terrestrial ecosystems.

Arizona, Nevada

Flow modification in the Nation’s streams and rivers

This report summarizes a national assessment of flowing waters conducted by the U.S. Geological Survey’s (USGS) National Water-Quality Assessment (NAWQA) Project and addresses several pressing questions about the modification of natural flows in streams and rivers. The assessment is based on the integration, modeling, and synthesis of monitoring data collected by the USGS and the U.S. Environmental Protection Agency at more than 7,000 streams and rivers across the conterminous United States from 1980 to 2014. Key findings include the following. First, flow in many of the Nation’s streams and rivers is different from what it would be under natural conditions. In particular, low flows are more frequent, are of shorter duration, and vary less from one year to the next than they would naturally. In addition, high flows have been reduced in magnitude, are of shorter duration, are less frequent, and vary less from one year to the next than they would naturally. Other characteristics of natural flows also have been modified. Second, over the last 60 years (1955–2014), climatic trends have caused a change of 50 percent or more in one or more streamflow attributes at two-thirds of climate-sensitive streamgaging sites. However, these climate-induced changes have been less influential on streamflow modification than have land and water-management practices. Third, in every region assessed, streamflow modification was associated with reduced ecological health, as indicated by two biological communities—invertebrates and fish. Biological communities were increasingly likely to be impaired (defined as having lost a statistically significant number of species) in streams with flows most different from natural conditions. Finally, several case studies are presented that illustrate viable management strategies for balancing the water needs of people and ecosystems.

Circular

National Water-Quality Assessment Program: Island of Oahu, Hawaii

During the past 25 years, our Nation has sought to improve its water quality; however, many water-quality issues remain unresolved. To address the need for consistent and scientifically sound information for managing the Nation's water resources, the U.S. Geological Survey began a full-scale National Water-Quality Assessment (NAWQA) Program in 1991. This program is unique compared with other national water-quality assessment studies in that it integrates the monitoring of the quality of surface and ground waters with the study of aquatic ecosystems. The goals of the NAWQA Program are to (1) describe current water-quality conditions for a large part of the Nation's freshwater streams and aquifers, (2) describe how water quality is changing over time, and (3) improve our understanding of the primary natural and human factors affecting water quality. Assessing the quality of water in every location of the Nation would not be practical; therefore, NAWQA Program studies are conducted within a set of areas called study units. These study units represent the diverse geography, water resources, and land and water uses of the Nation. The island of Oahu, Hawaii, is one such study unit designed to supplement water-quality information collected in other study units across the Nation while addressing issues relevant to the island of Oahu.

Fact Sheet

Giant Constrictors: Biological and Management Profiles and an Establishment Risk Assessment for Nine Large Species of Pythons, Anacondas, and the Boa Constrictor

Giant Constrictors: Biological and Management Profiles and an Establishment Risk Assessment for Nine Large Species of Pythons, Anacondas, and the Boa Constrictor, estimates the ecological risks associated with colonization of the United States by nine large constrictors. The nine include the world's four largest snake species (Green Anaconda, Eunectes murinus; Indian or Burmese Python, Python molurus; Northern African Python, Python sebae; and Reticulated Python, Broghammerus reticulatus), the Boa Constrictor (Boa constrictor), and four species that are ecologically or visually similar to one of the above (Southern African Python, Python natalensis; Yellow Anaconda, Eunectes notaeus; DeSchauensee's Anaconda, Eunectes deschauenseei; and Beni Anaconda, Eunectes beniensis). At present, the only probable pathway by which these species would become established in the United States is the pet trade. Although importation for the pet trade involves some risk that these animals could become established as exotic or invasive species, it does not guarantee such establishment. Federal regulators have the task of appraising the importation risks and balancing those risks against economic, social, and ecological benefits associated with the importation. The risk assessment quantifies only the ecological risks, recognizing that ecosystem processes are complex and only poorly understood. The risk assessment enumerates the types of economic impacts that may be experienced, but leaves quantification of economic costs to subsequent studies. Primary factors considered in judging the risk of establishment were: (1) history of establishment in other countries, (2) number of each species in commerce, (3) suitability of U.S. climates for each species, and (4) natural history traits, such as reproductive rate and dispersal ability, that influence the probability of establishment, spread, and impact. In addition, the risk assessment reviews all management tools for control of invasive giant constrictor populations. There is great uncertainty about many aspects of the risk assessment; the level of uncertainty is estimated separately for each risk component. Overall risk was judged to be high for five of the giant constrictors studied, and medium for the other four species. Because all nine species shared a large number of natural history traits that promote invasiveness or impede population control, none of the species was judged to be of low risk.

Open-File Report

Nutrient and Suspended-Sediment Trends in the Missouri River Basin, 1993-2003

Trends in streamflow and concentration of total nitrogen, nitrite plus nitrate, ammonia, total phosphorus, orthophosphorus, and suspended sediment were determined for the period from 1993 to 2003 at selected stream sites in the Missouri River Basin. Flow-adjusted trends in concentration (the trends that would have occurred in the absence of natural changes in streamflow) and non-flow-adjusted trends in concentration (the overall trends resulting from natural and human factors) were determined. In the analysis of flow-adjusted trends, the removal of streamflow as a variable affecting concentration allowed trends caused by other factors such as implementation of best management practices to be identified. In the analysis of non-flow-adjusted trends, the inclusion of any and all factors affecting concentration allowed trends affecting aquatic ecosystems and the status of streams relative to water-quality standards to be identified. Relations between the flow-adjusted and non-flow-adjusted trends and changes in streamflow, nutrient sources, ground-water inputs, and implementation of management practices also were examined to determine the major factors affecting the trends. From 1993 to 2003, widespread downward trends in streamflow indicated that drought conditions from about 2000 to 2003 led to decreasing streamflow throughout much of the Missouri River Basin. Flow-adjusted trends in nitrite plus nitrate and ammonia concentrations were split nearly equally between nonsignificant and downward; at about one-half of the sites, management practices likely were contributing to measurable decreases in concentrations of nitrite plus nitrate and ammonia. Management practices had less of an effect on concentrations of total nitrogen; downward flow-adjusted trends in total nitrogen concentrations occurred at only 2 of 19 sites. The pattern of non-flow-adjusted trends in nitrite plus nitrate concentrations was similar to the pattern of flow-adjusted trends; non-flow-adjusted trends were split nearly equally between nonsignificant and downward. A substantial source of nitrite plus nitrate to these streams likely was ground water; because of the time required for ground water to travel to streams, there may have been a lag time between the implementation of some pollution-control strategies and improvement in stream quality, contributing to the nonsignificant trends in nitrite plus nitrate. There were more sites with downward non-flow-adjusted trends than flow-adjusted trends in both ammonia and total nitrogen concentrations, possibly a result of decreased surface runoff from nonpoint sources associated with the downward trends in streamflow. No strong relations between any of the nitrogen trends and changes in nutrient sources or landscape characteristics were identified. Although there were very few upward trends in nitrogen from 1993 to 2003, there were upward flow-adjusted trends in total phosphorus concentrations at nearly one-half of the sites. At these sites, not only were pollution-control strategies not contributing to measurable decreases in total phosphorus concentrations, there was likely an increase in phosphorus loading on the land surface. There were fewer upward non-flow-adjusted than flow-adjusted trends in total phosphorus concentrations; at the majority of sites, overall total phosphorus concentrations did not change significantly during this period. The preponderance of upward flow-adjusted trends and nonsignificant non-flow-adjusted trends indicates that in some areas of the Missouri River Basin, overall concentrations of total phosphorus would have been higher without the decrease in streamflow and the associated decrease in surface runoff during the study period. During the study period, phosphorus loads from fertilizer generally increased at over one-half of the sites in the basin. Upward flow-adjusted trends were related to increasing fertilizer use in the upstream drainage area, particularly in the 10 percent

Scientific Investigations Report

Aeolian controls of soil geochemistry and weathering fluxes in high-elevation ecosystems of the Rocky Mountains, Colorado

When dust inputs are large or have persisted for long periods of time, the signature of dust additions are often apparent in soils. The of dust will be greatest where the geochemical composition of dust is distinct from local sources of soil parent material. In this study the influence of dust accretion on soil geochemistry is quantified for two different soils from the San Juan Mountains of southwestern Colorado, USA. At both study sites, dust is enriched in several trace elements relative to local rock, especially Cd, Cu, Pb, and Zn. Mass-balance calculations that do not explicitly account for dust inputs indicate the accumulation of some elements in soil beyond what can be explained by weathering of local rock. Most observed elemental enrichments are explained by accounting for the long-term accretion of dust, based on modern isotopic and geochemical estimates. One notable exception is Pb, which based on mass-balance calculations and isotopic measurements may have an additional source at one of the study sites. These results suggest that dust is a major factor influencing the development of soil in these settings and is also an important control of soil weathering fluxes. After accounting for dust inputs in mass-balance calculations, Si weathering fluxes from San Juan Mountain soils are within the range observed for other temperate systems. Comparing dust inputs with mass-balanced based flux estimates suggests dust could account for as much as 50–80% of total long-term chemical weathering fluxes. These results support the notion that dust inputs may sustain chemical weathering fluxes even in relatively young continental settings. Given the widespread input of far-traveled dust, the weathering of dust is likely and important and underappreciated aspect of the global weathering engine.

Colorado

Hydrologic characterization for Spring Creek and hydrologic budget and model scenarios for Sheridan Lake, South Dakota, 1962-2007

The U.S. Geological Survey cooperated with South Dakota Game, Fish and Parks to characterize hydrologic information relevant to management of water resources associated with Sheridan Lake, which is formed by a dam on Spring Creek. This effort consisted primarily of characterization of hydrologic data for a base period of 1962 through 2006, development of a hydrologic budget for Sheridan Lake for this timeframe, and development of an associated model for simulation of storage deficits and drawdown in Sheridan Lake for hypothetical release scenarios from the lake. Historically, the dam has been operated primarily as a 'pass-through' system, in which unregulated outflows pass over the spillway; however, the dam recently was retrofitted with an improved control valve system that would allow controlled releases of about 7 cubic feet per second (ft3/s) or less from a fixed depth of about 60 feet (ft). Development of a hydrologic budget for Sheridan Lake involved compilation, estimation, and characterization of data sets for streamflow, precipitation, and evaporation. The most critical data need was for extrapolation of available short-term streamflow records for Spring Creek to be used as the long-term inflow to Sheridan Lake. Available short-term records for water years (WY) 1991-2004 for a gaging station upstream from Sheridan Lake were extrapolated to WY 1962-2006 on the basis of correlations with streamflow records for a downstream station and for stations located along two adjacent streams. Comparisons of data for the two streamflow-gaging stations along Spring Creek indicated that tributary inflow is approximately proportional to the intervening drainage area, which was used as a means of estimating tributary inflow for the hydrologic budget. Analysis of evaporation data shows that sustained daily rates may exceed maximum monthly rates by a factor of about two. A long-term (1962-2006) hydrologic budget was developed for computation of reservoir outflow from Sheridan Lake for the historical pass-through operating system. Two inflow components (stream inflow and precipitation) and one outflow component (evaporation) were considered. The hydrologic budget uses monthly time steps within a computational year that includes two 6-month periods - May through October, for which evaporation is accounted for, and November through April, when evaporation is considered negligible. Results indicate that monthly evaporation rates can substantially exceed inflow during low-flow periods, and potential exists for outflows to begin approaching zero-flow conditions substantially prior to the onset of zero-inflow conditions, especially when daily inflow and evaporation are considered. Results also indicate that September may be the month for greatest potential benefit for enhancing fish habitat and other ecosystem values in downstream reaches of Spring Creek with managed releases of cool water. Computed monthly outflows from Sheridan Lake for September are less than 1.0 ft3/s for 8 of the 44 years (18 percent) and are less than 2.0 ft3/s for 14 of the 44 years (32 percent). Conversely, none of the computed outflows for May are less than 2.0 ft3/s. A short-term (July through September 2007) data set was used to calculate daily evaporation from Sheridan Lake and to evaluate the applicability of published pan coefficients. Computed values of pan coefficients of approximately 1.0 and 1.1 for two low-flow periods are larger than the mean annual pan coefficient of 0.74 for the area that is reported in the literature; however, the computed values are consistent with pan coefficients reported elsewhere for similar late summer and early fall periods. Thus, these results supported the use of variable monthly pan coefficients for the long-term hydrologic budget. A hydrologic model was developed using the primary components of the hydrologic budget and was used to simulate monthly storage deficits and drawdown for Sheridan Lake using hypothetical

South Dakota

Assessing the robustness of quantitative fatty acid signature analysis to assumption violations

Knowledge of animal diets can provide important insights into life history and ecology, relationships among species in a community and potential response to ecosystem change or perturbation. Quantitative fatty acid signature analysis (QFASA) is a method of estimating diets from data on the composition, or signature, of fatty acids stored in adipose tissue. Given data on signatures of potential prey, a predator diet is estimated by minimizing the distance between its signature and a mixture of prey signatures. Calibration coefficients, constants derived from feeding trials, are used to account for differential metabolism of individual fatty acids. QFASA has been widely applied since its introduction and several variants of the original estimator have appeared in the literature. However, work to compare the statistical properties of QFASA estimators has been limited. One important characteristic of an estimator is its robustness to violations of model assumptions. The primary assumptions of QFASA are that prey signature data contain representatives of all prey types consumed and the calibration coefficients are known without error. We investigated the robustness of two QFASA estimators to a range of violations of these assumptions using computer simulation and recorded the resulting bias in diet estimates. We found that the Aitchison distance measure was most robust to errors in the calibration coefficients. Conversely, the Kullback&ndash;Leibler distance measure was most robust to the consumption of prey without representation in the prey signature data. In most QFASA applications, investigators will generally have some knowledge of the prey available to predators and be able to assess the completeness of prey signature data and sample additional prey as necessary. Conversely, because calibration coefficients are derived from feeding trials with captive animals and their values may be sensitive to consumer physiology and nutritional status, their applicability to free-ranging animals is difficult to establish. We therefore recommend that investigators first make any improvements to the prey signature data that seem warranted and then base estimation on the Aitchison distance measure, as it appears to minimize risk from violations of the assumption that is most difficult to verify.

Methods in Ecology and Evolution

First records distribution models to guide biosurveillance for non-native species

Quickly locating new populations of non-native species can reduce the ecological and economic costs of species invasions. However, the difficulty of predicting which new non-native species will establish, and where, has limited active post-border biosurveillance efforts. Because pathways of introduction underlie spatial patterns of establishment risk, an intuitive approach is to search for new non-native species in areas where many non-native species have first been detected in the past. We formalize this intuition via first records distribution models (FRDMs), which apply species distribution modeling methods to the collection of first occurrence records across species (i.e. one record per species). We define FRDMs as statistical models that quantify environmental conditions associated with species' first naturalized records to predict spatial patterns of establishment risk. We model the first records of non-native plants in the conterminous USA as a proof-of-concept. The novelty of FRDMs is that their inferences apply not just to the species that contributed data; they provide a rigorous framework for predicting hotspots of invasion for new non-native taxa that share a pathway of introduction with the modeled species. FRDMs can guide survey efforts for new non-native taxa at multiple scales and across ecosystems.

conterminous United States

Variability in Lotic Communities in Three Contrasting Stream Environments in the Santa Ana River Basin, California, 1999-2001

Biotic communities and environmental conditions can be highly variable between natural ecosystems. The variability of natural assemblages should be considered in the interpretation of any ecological study when samples are either spatially or temporally distributed. Little is known about biotic variability in the Santa Ana River Basin. In this report, the lotic community and habitat assessment data from ecological studies done as part of the U.S. Geological Survey's National Water-Quality Assessment (NAWQA) program are used for a preliminary assessment of variability in the Santa Ana Basin. Habitat was assessed, and benthic algae, benthic macroinvertebrate, and fish samples were collected at four sites during 1999-2001. Three of these sites were sampled all three years. One of these sites is located in the San Bernardino Mountains, and the other two sites are located in the alluvial basin. Analysis of variance determined that the three sites with multiyear data were significantly different for 41 benthic algae metrics and 65 macroinvertebrate metrics and fish communities. Coefficients of variation (CVs) were calculated for the habitat measurements, metrics of benthic algae, and macroinvertebrate data as measures of variability. Annual variability of habitat data was generally greater at the mountain site than at the basin sites. The mountain site had higher CVs for water temperature, depth, velocity, canopy angle, streambed substrate, and most water-quality variables. In general, CVs of most benthic algae metrics calculated from the richest-targeted habitat (RTH) samples were greater at the mountain site. In contrast, CVs of most benthic algae metrics calculated from depositional-targeted habitat (DTH) samples were lower at the mountain site. In general, CVs of macroinvertebrate metrics calculated from qualitative multihabitat (QMH) samples were lower at the mountain site. In contrast, CVs of many metrics calculated from RTH samples were greater at the mountain site than at one of the basin sites. Fish communities were more variable at the basin sites because more species were present at these sites. Annual variability of benthic algae metrics was related to annual variability in habitat variables. The CVs of benthic algae metrics related to the most CVs of habitat variables included QMH taxon richness, the RTH percentage richness, RTH abundance of tolerant taxa, RTH percentage richness of halophilic diatoms, RTH percentage abundance of sestonic diatoms, DTH percentage richness of nitrogen heterotrophic diatoms, and DTH pollution tolerance index. The CVs of macroinvertebrate metrics related to the most CVs of habitat variables included the RTH trichoptera, RTH EPT, RTH scraper richness, RTH nonchironomid dipteran abundance (in percent), and RTH EPA (U.S. Environmental Protection Agency) tolerance, which is based on abundance. Many of the CVs of habitat variables related to CVs of macroinvertebrate metrics were the same habitat variables that were related to the CVs of benthic algae metrics. On the basis of these results, annual variability may have a role in the relationship of benthic algae and macroinvertebrates assemblages with habitat and water quality in the Santa Ana Basin. This report provides valuable baseline data on the variability of biological communities in the Santa Ana Basin.

Scientific Investigations Report

Pathology of mouse (Mus musculus) predation on Laysan albatross (Phoebastria immutabilis) on Midway Atoll National Wildlife Refuge

Invasive rodents on islands have adverse effects on native birds in island ecosystems, and rats are the most common culprits. Recently, house mice ( Mus musculus ) in the South Atlantic were found preying on three species of albatross chicks. Here, we show that house mice can also prey on nesting adult Laysan Albatross ( Phoebastria immutabilis ) on Midway Atoll National Wildlife Refuge (US). In contrast to mouse attacks on albatross in the South Atlantic, where mice targeted the rump and crown of chicks, on Midway, mice targeted nesting adults mainly on the back. For both regions, the outcome was similar with reduced nesting success. In the case of Midway, reduced nesting success was due to nest abandonment or mortality of one or both parents because of secondary bacterial infections. Mouse-induced mortality of adult albatross has the potential to have a more potent demographic effect because of their much higher natural survivorship once they reach adulthood.

Midway Atoll

Mangroves provide blue carbon ecological value at a low freshwater cost

“Blue carbon” wetland vegetation has a limited freshwater requirement. One type, mangroves, utilizes less freshwater during transpiration than adjacent terrestrial ecoregions, equating to only 43% (average) to 57% (potential) of evapotranspiration ( E T "> E T ). Here, we demonstrate that comparative consumptive water use by mangrove vegetation is as much as 2905 kL H 2 O ha −1 year −1 less than adjacent ecoregions with E c "> E c -to- E T "> E T ratios of 47–70%. Lower porewater salinity would, however, increase mangrove E c "> E c -to- E T "> E T ratios by affecting leaf-, tree-, and stand-level eco-physiological controls on transpiration. Restricted water use is also additive to other ecosystem services provided by mangroves, such as high carbon sequestration, coastal protection and support of biodiversity within estuarine and marine environments. Low freshwater demand enables mangroves to sustain ecological values of connected estuarine ecosystems with future reductions in freshwater while not competing with the freshwater needs of humans. Conservative water use may also be a characteristic of other emergent blue carbon wetlands.

Scientific Reports