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USGS2023

Value-aligned planning objectives for restoring North Carolina aquatic resources

Rapid population growth and development in the southeastern United States have resulted in substantial impairment to freshwater aquatic ecosystems. National or regional restoration policies strive to address impaired ecosystems but can suffer from inconsistent and opaque processes. The Clean Water Act, for example, establishes reallocation mechanisms to transfer ecosystem services from sites of disturbance to compensation sites to offset aquatic resource functions that are unavoidably lost through land development. However, planning for the prioritization of compensatory mitigation areas is often hampered by unstructured decision-making processes that are narrowly framed because they are not co-produced with stakeholders affected by, or having an interest in, the impacts and mitigation. This summary report represents the collaborative efforts of the U.S. Geological Survey and the North Carolina Department of Environmental Quality, Division of Mitigation Services, to co-develop an applied decision framework following the principles of structured decision-making for prioritizing watershed catchments by their potential for realizing a range of beneficial outcomes from future mitigation projects. The framework focuses on supporting the State’s nationally recognized stream and wetlands compensatory mitigation program by clarifying a discrete decision problem and specifying agency and stakeholder values to formulate fundamental and means objectives for prioritizing restoration sites. The co-development of this decision framework resulted in a number of useful insights from the perspective of the decision maker, including recognition (1) that the problem is a multi-objective decision driven by values beyond restoring lost functionality of ecosystems (that is, biogeophysical goals), (2) that the decision comprises a linked and sequential planning-to-implementation process, and (3) that future risk associated with land-use and climate change must be considered. The outcomes of this collaboration can serve as a systematic and transparent framework to prioritize a wide range of restoration, conservation, and resource-allocation activities in similar environmental contexts across the Nation.

North Carolina↗

USGS2010

Zn and Cu isotopes as tracers of anthropogenic contamination in a sediment core from an urban lake

In this work, we use stable Zn and Cu isotopes to identify the sources and timing of the deposition of these metals in a sediment core from Lake Ballinger near Seattle, Washington, USA. The base of the Lake Ballinger core predates settlement in the region, while the upper sections record the effects of atmospheric emissions from a nearby smelter and rapid urbanization of the watershed. δ 66 Zn and δ 65 Cu varied by 0.50‰ and 0.29‰, respectively, over the 500 year core record. Isotopic changes were correlated with the presmelter period (∼1450 to 1900 with δ 66 Zn = +0.39‰ ± 0.09‰ and δ 65 Cu = +0.77‰ ± 0.06‰), period of smelter operation (1900 to 1985 with δ 66 Zn = +0.14 ± 0.06‰ and δ 65 Cu = +0.94 ± 0.10‰), and postsmelting/stable urban land use period (post 1985 with δ 66 Zn = 0.00 ± 0.10‰ and δ 65 Cu = +0.82‰ ± 0.12‰). Rapid early urbanization during the post World War II era increased metal loading to the lake but did not significantly alter the δ 66 Zn and δ 65 Cu, suggesting that increased metal loads during this time were derived mainly from mobilization of historically contaminated soils. Urban sources of Cu and Zn were dominant since the smelter closed in the 1980s, and the δ 66 Zn measured in tire samples suggests tire wear is a likely source of Zn.

Washington↗

USGS1999

Rice pesticide concentrations in the Colusa Basin Drain and the Sacramento River, California, 1990-1993

The pesticides molinate, thiobencarb, and carbofuran are applied to rice ( Oryza sativa L.) fields in the Sacramento Valley, California, each year during April through June. These pesticides are of concern because of their adverse effects on water quality and their potential adverse effects on aquatic life. Therefore, the California Regional Water Quality Control Board (CRWQCB) mandated the holding of irrigation-return water in rice fields to increase pesticide degradation and dissipation before the water is released to the Sacramento River. The CRWQCB also established performance goals to maintain drinking water quality for the city of Sacramento and to protect the habitat for aquatic life. The objectives of this study were to determine the effects of increased irrigation-return water holding times on rice pesticide concentrations and loads in the Colusa Basin Drain and the Sacramento River. Dissolved pesticide concentrations were measured in water samples collected in May through July during 1990–1993 at the Colusa Basin Drain at Road 99E near Knights Landing (Colosa Basin Drain) and at the Sacramento River at Sacramento. Pesticide concentrations and loads at both sites showed a decrease from 1990–1992 and an increase in 1993. This trend cannot be explained by the yearly holding time regulations but can be explained by the amount of yearly emergency releases. The yearly changes in pesticide concentration detected demonstrate that continued monitoring and management of pesticides is necessary to maintain water quality.

California↗

USGS2020

Making ‘chemical cocktails’ – Evolution of urban geochemical processes across the periodic table of elements

Urbanization contributes to the formation of novel elemental combinations and signatures in terrestrial and aquatic watersheds, also known as ‘chemical cocktails.’ The composition of chemical cocktails evolves across space and time due to: (1) elevated concentrations from anthropogenic sources, (2) accelerated weathering and corrosion of the built environment, (3) increased drainage density and intensification of urban water conveyance systems, and (4) enhanced rates of geochemical transformations due to changes in temperature, ionic strength, pH, and redox potentials. Characterizing chemical cocktails and underlying geochemical processes is necessary for: (1) tracking pollution sources using complex chemical mixtures instead of individual elements or compounds; (2) developing new strategies for co-managing groups of contaminants; (3) identifying proxies for predicting transport of chemical mixtures using continuous sensor data; and (4) determining whether interactive effects of chemical cocktails produce ecosystem-scale impacts greater than the sum of individual chemical stressors. First, we discuss some unique urban geochemical processes which form chemical cocktails, such as urban soil formation, human-accelerated weathering, urban acidification-alkalinization, and Freshwater Salinization Syndrome. Second, we review and synthesize global patterns in concentrations of major ions, carbon and nutrients, and trace elements in urban streams across different world regions and make comparisons with reference conditions. In addition to our global analysis, we highlight examples from watersheds in the Baltimore-Washington DC area, USA, which show increased transport of major ions, trace metals, and nutrients across streams draining a well-defined land-use gradient. Urbanization increased the concentrations of multiple major and trace elements in streams draining human-dominated watersheds compared to reference conditions. Chemical cocktails of major and trace elements were formed over diurnal cycles coinciding with changes in streamflow, dissolved oxygen, pH, and other variables measured by high-frequency sensors. Some chemical cocktails of major and trace elements were also significantly related to specific conductance (p < 0.05), which can be measured by sensors. Concentrations of major and trace elements increased, peaked, or decreased longitudinally along streams as watershed urbanization increased, which is consistent with distinct shifts in chemical mixtures upstream and downstream of other major cities in the world. Our global analysis of urban streams shows that concentrations of multiple elements along the periodic table significantly increase when compared with reference conditions. Furthermore, similar biogeochemical patterns and processes can be grouped among distinct mixtures of elements of major ions, dissolved organic matter, nutrients, and trace elements as chemical cocktails. Chemical cocktails form in urban waters over diurnal cycles, decades, and throughout drainage basins. We conclude our global review and synthesis by proposing strategies for monitoring and managing chemical cocktails using source control, ecosystem restoration, and green infrastructure. We discuss future research directions applying the watershed chemical cocktail approach to diagnose and manage environmental problems. Ultimately, a chemical cocktail approach targeting sources, transport, and transformations of different and distinct elemental combinations is beneficial to more holistically monitor and manage the emerging impacts of chemical mixtures in the world's fresh waters.

Applied Geochemistry↗

USGS2020

Biogeography of fire regimes in western US conifer forests: A trait-based approach

Aim Functional traits are a critical link between species distributions and the ecosystem processes that structure those species’ niches. Concurrent increases in the availability of functional trait data and our ability to model species distributions present an opportunity to develop functional trait biogeography, i.e. the mapping of functional traits across space. Functional trait biogeography can improve process-based predictions about the resistance of certain species assemblages to changing environmental conditions across landscape scales. We illustrate this concept by developing the first trait-based, quantitative ranking of fire resistance (adult tree survival) in North American conifer species, and mapping that fire resistance across space. Location and Time period Western Continental United States, present-day. Major taxa studied 29 common conifer tree species. Methods We compiled six traits for each species: three relating to tree morphology and three relating to litter flammability. We combined these traits into a single fire resistance score, and used community-weighted averaging to estimate the fire resistance scores of different forest communities, using interpolated species distribution and relative abundance data. Results Species associated with historically frequent fire have high fire resistance scores (e.g., Pinus ponderosa), reflected by thick bark, tall crowns, and flammable litter. Species associated with subalpine or arid conditions have low fire resistance scores (e.g., Picea engelmannii and Pinus edulis), reflected by thin bark, short stature, poor self-pruning and low litter flammability. A map of forest community fire resistance across the western US reveals agreement with independent assessments of historical fire regimes, while also identifying areas where community-wide species traits may be mismatched with historical fire regimes. Main conclusions Quantifying the functional traits that confer resistance to tree-killing fire provides a direct link between ecosystem disturbance and community resistance. Understanding this link is critical to evaluating long-term resilience of different forest types under dynamic fire regimes. Our work represents the first known spatial representation of fire-resistance traits at a regional scale, and as such provides a link between functional traits and biogeography relevant to a critical ecosystem process.

Global Ecology and Biogeography↗

USGS2006

Shorebird roost-site selection at two temporal scales: Is human disturbance a factor?

1. Roost-site selection in shorebirds is governed by ambient factors, including environmental conditions and human disturbance. Determination of the extent to which these factors affect roost use and the associated implications for shorebird habitat protection is important for conservation strategies and informed management of human recreational use of these habitats. Shorebird conservation as a whole is a high priority world-wide because a large proportion of shorebird species is in decline. However, little is understood about the consistency of roost use by different species, what conditions affect species-specific roost-site selection, and at what spatial and temporal scales conditions influence selection. 2. We studied high-tide roost-site selection by eight species of non-breeding shorebirds on a critically important stopover and wintering refuge. We calculated spatial and temporal variability in roost use for each species based on counts and consistency of incidence. We then examined roost-site selection in relation to structural, environmental and human disturbance factors, and how this varied across spatial and temporal scales. 3. Most roosts were used less than 50% of the time, although larger roosts were used more consistently. This varied among species, with red knot Calidris canutus tending to concentrate at a few roosts and American oystercatcher Haematopus palliatus, dowitcher Limnodromus griseus and Limnodromus scolopaceus and ruddy turnstone Arenaria interpres more diffusely distributed among roosts. 4. At an annual scale, the principal factors affecting shorebird presence at roosts were roost length (size), local region, substrate and aspect. The extent and direction of these effects varied among species. Among years, red knots avoided roosts that had high average boat activity within 1000 m, but disturbance did not appear to be a factor for other species. 5. Daily roost use was influenced primarily by wind speed and the ability of roosts to provide shelter from the wind. Only dowitchers appeared to track daily disturbance, avoiding prospective roosts when boat activity within 100 m was high. 6. Synthesis and applications. Our findings emphasize the need to consider species-specific differences in temporal- and spatial-scale effects of roost-site selection factors, including human disturbance, when employing conservation measures for shorebirds. We suggest that conservation management should aim to provide a wide range of potential roosts (both natural and artificial) that could be used under different wind conditions and that are within reasonable travelling distance of preferred feeding areas. Roost use is often highly variable, and monitoring efforts must take this into account before making inferences about changes in use or selection of roost sites. ?? 2006 The Authors.

Journal of Applied Ecology↗

USGS2016

Bacterial genomics reveal the complex epidemiology of an emerging pathogen in arctic and boreal ungulates

Northern ecosystems are currently experiencing unprecedented ecological change, largely driven by a rapidly changing climate. Pathogen range expansion, and emergence and altered patterns of infectious disease, are increasingly reported in wildlife at high latitudes. Understanding the causes and consequences of shifting pathogen diversity and host-pathogen interactions in these ecosystems is important for wildlife conservation, and for indigenous populations that depend on wildlife. Among the key questions are whether disease events are associated with endemic or recently introduced pathogens, and whether emerging strains are spreading throughout the region. In this study, we used a phylogenomic approach to address these questions of pathogen endemicity and spread for Erysipelothrix rhusiopathiae , an opportunistic multi-host bacterial pathogen associated with recent mortalities in arctic and boreal ungulate populations in North America. We isolated E. rhusiopathiae from carcasses associated with large-scale die-offs of muskoxen in the Canadian Arctic Archipelago, and from contemporaneous mortality events and/or population declines among muskoxen in northwestern Alaska and caribou and moose in western Canada. Bacterial genomic diversity differed markedly among these locations; minimal divergence was present among isolates from muskoxen in the Canadian Arctic, while in caribou and moose populations, strains from highly divergent clades were isolated from the same location, or even from within a single carcass. These results indicate that mortalities among northern ungulates are not associated with a single emerging strain of E. rhusiopathiae , and that alternate hypotheses need to be explored. Our study illustrates the value and limitations of bacterial genomic data for discriminating between ecological hypotheses of disease emergence, and highlights the importance of studying emerging pathogens within the broader context of environmental and host factors.

Frontiers in Microbiology↗

USGS2024

Deep-ocean macrofaunal assemblages on ferromanganese and phosphorite-rich substrates in the Southern California Borderland

Mineral-rich hardgrounds, such as ferromanganese (FeMn) crusts and phosphorites, occur on seamounts and continental margins, gaining attention for their resource potential due to their enrichment in valuable metals in some regions. This study focuses on the Southern California Borderland (SCB), an area characterized by uneven and heterogeneous topography featuring FeMn crusts, phosphorites, basalt, and sedimentary rocks that occur at varying depths and are exposed to a range of oxygen concentrations. Due to its heterogeneity, this region serves as an optimal setting for investigating the relationship between mineral-rich hardgrounds and benthic fauna. This study characterizes the density, diversity, and community composition of macrofauna (>300 μm) on hardgrounds as a function of substrate type and environment (depth and oxygen ranges). Rocks and their macrofauna were sampled quantitatively using remotely operated vehicles (ROVs) during expeditions in 2020 and 2021 at depths above, within, and below the oxygen minimum zone (OMZ). A total of 3,555 macrofauna individuals were counted and 416 different morphospecies (excluding encrusting bryozoans and hydrozoans) were identified from 82 rocks at depths between 231 and 2,688 m. Average density for SCB macrofauna was 11.08 ± 0.87 ind. 200 cm −2 and mean Shannon-Wiener diversity per rock (H′ [loge] ) was 2.22 ± 0.07. A relationship was found between substrate type and macrofaunal communities. Phosphorite rocks had the highest H′ of the four substrates compared on a per-rock basis. However, when samples were pooled by substrate, FeMn crusts had the highest H′ and rarefaction diversity. Of all the environmental variables examined, water depth explained the largest variance in macrofaunal community composition. Macrofaunal density and diversity values were similar at sites within and outside the OMZ. This study is the first to analyze the macrofaunal communities of mineral-rich hardgrounds in the SCB, which support deep-ocean biodiversity by acting as specialized substrates for macrofaunal communities. Understanding the intricate relationships between macrofaunal assemblages and mineral-rich substrates may inform effects from environmental disruptions associated with deep-seabed mining or climate change. The findings contribute baseline information useful for effective conservation and management of the SCB and will support scientists in monitoring changes in these communities due to environmental disturbance or human impact in the future.

California↗

USGS2024

Co-mast: Harmonized seed production data for woody plants across US long-term research sites

Plants display a range of temporal patterns of inter-annual reproduction, from relatively constant seed production to “mast seeding,” the synchronized and highly variable interannual seed production of plants within a population. Previous efforts have compiled global records of seed production in long-lived plants to gain insight into seed production, forest and animal population dynamics, and the effects of global change on masting. Existing datasets focus on seed production dynamics at the population scale but are limited in their ability to examine community-level mast seeding dynamics across different plant species at the continental scale. We harmonized decades of plant reproduction data for 141 woody plant species across nine Long-Term Ecological Research (LTER) or long-term ecological monitoring sites from a wide range of habitats across the United States. Plant reproduction data are reported annually between 1957 and 2021 and based on either seed traps or seed and/or cone counts on individual trees. A wide range of woody plant species including trees, shrubs, and lianas are represented within sites allowing for direct community-level comparisons among species. We share code for filtering of data that enables the comparison of plot and individual tree data across sites. For each species, we compiled relevant life history attributes (e.g., seed mass, dispersal syndrome, seed longevity, sexual system) that may serve as important predictors of mast seeding in future analyses. To aid in phylogenetically informed analyses, we also share a phylogeny and phylogenetic distance matrix for all species in the dataset. These data can be used to investigate continent-scale ecological properties of seed production, including individual and population variability, synchrony within and across species, and how these properties of seed production vary in relation to plant species traits and environmental conditions. In addition, these data can be used to assess how annual variability in seed production is associated with climate conditions and how that varies across populations, species, and regions. The dataset is released under a CC0 1.0 Universal public domain license.

Ecology↗

USGS2021

Monthly river temperature trends across the US confound annual changes

Climate variations and human modifications of the water cycle continue to alter the Earth's surface water and energy exchanges. It is therefore critical to ascertain how these changes impact water quality and aquatic ecosystem habitat metrics such as river temperatures. Though river temperature trend analyses exist in the literature, studies on seasonal trends in river temperatures across large spatial extents, e.g. the contiguous United States (US), are limited. As we show through both annual and monthly trend analyses for 20 year ( n = 138 sites) and 40 year ( n = 40 sites) periods, annual temperature trends across the US mask extensive monthly variability. While most sites exhibited annual warming trends, these annual trends obscured sub-annual cooling trends at many sites. Monthly trend anomalies were spatially organized, with persistent regional patterns at both reference and human-impacted sites. The largest warming and cooling anomalies happened at human impacted sites and during summer months. Though our analysis points to coherence in trends as well as the overall impact of human activity in driving these patterns, we did not investigate the impact of river temperature observation accuracy on reported trends, an area needed for future work. Overall, these patterns emphasize the need to consider sub-annual behavior when managing the ecological impacts of river temperature throughout lotic networks.

Environmental Research Letters↗

USGS2023

A 1300-year microfaunal record from the Beaufort Sea shelf indicates exceptional climate-related environmental changes over the last two centuries

The environments of Arctic Ocean nearshore areas experience high intra- and inter-annual variability, making it difficult to evaluate the impact of anthropogenic warming. However, a sediment record from the southern Canadian Beaufort Sea allowed us to reconstruct the impacts of climate and environmental changes over the last 1300 years along the northern Yukon coast, Canada. The coring site (PG2303; 69.513°N, 138.895°W; water depth 32 m) is located in the Herschel Basin, where high sedimentation rates (0.1–0.5 cm a −1 ) allowed analyses at sub-centennial to decadal resolutions. Benthic foraminiferal, ostracod, and tintinnid assemblages, as well as the stable isotope composition of the foraminifera Elphidium clavatum and Cassidulina reniforme were used as paleoclimatic and ecological indicators, while the age model was based on the combined radiometric data of 14 C, 210 Pb and 137 Cs . From ca 700 to 1050 CE, our data suggest penetration of offshore shelf-break waters inferred by the dominance of C. reniforme followed by the relatively abundant Triloculina trihedra in the foraminiferal assemblages as both species are associated with stable saline conditions. Afterwards, the occurrence of ostracods Kotoracythere arctoborealis and Normanicythere leioderma suggests influx of Pacific-sourced waters until ca. 1150 CE. From ∼1150–1650 CE, persistent frigid waters, limited sediment supply, and low abundances of microfossils suggest cold conditions with pervasive annual sea-ice cover that may have restricted upwelling of oceanic waters. After ∼1800 CE, the co-occurrence of Tintinnopsis fimbriata and bacterial/complex organic carbon feeder foraminifera ( Quinqueloculina stalkeri , Textularia earlandi and Stetsonia horvathi ), suggest an increased influence of freshwater rich in particulate organic matter, which may be related to the spreading of the Mackenzie River plume and/or increased coastal permafrost erosion during longer ice-free seasons. Based on these proxy data, the shift at ∼1800 CE marks the onset of regional warming, which further intensified after ∼1955 CE, likely in response to the anthropogenic forcing.

Alaska, Yukon↗

USGS2015

Plant-plant interactions in a subtropical mangrove-to-marsh transition zone: effects of environmental drivers

Questions Does the presence of herbaceous vegetation affect the establishment success of mangrove tree species in the transition zone between subtropical coastal mangrove forests and marshes? How do plant–plant interactions in this transition zone respond to variation in two primary coastal environmental drivers? Location Subtropical coastal region of the southern United States. Methods We conducted a greenhouse study to better understand how abiotic factors affect plant species interactions in the mangrove-to-marsh transition zone, or ecotone. We manipulated salinity (fresh, brackish or salt water) and hydrologic conditions (continuously saturated or 20-cm tidal range) to simulate ecotonal environments. Propagules of the mangroves Avicennia germinans and Laguncularia racemosa were introduced to mesocosms containing an established marsh community. Both mangrove species were also introduced to containers lacking other vegetation. We monitored mangrove establishment success and survival over 22 mo. Mangrove growth was measured as stem height and above-ground biomass. Stem height, stem density and above-ground biomass of the dominant marsh species were documented. Results Establishment success of A. germinans was reduced under saturated saltwater conditions, but establishment of L. racemosa was not affected by experimental treatments. There was complete mortality of A. germinans in mesocosms under freshwater conditions, and very low survival of L. racemosa . In contrast, survival of both species in monoculture under freshwater conditions exceeded 62%. The marsh species Distichlis spicata and Eleocharis cellulosa suppressed growth of both mangroves throughout the experiment, whereas the mangroves did not affect herbaceous species growth. The magnitude of growth suppression by marsh species varied with environmental conditions; suppression was often higher in saturated compared to tidal conditions, and higher in fresh and salt water compared to brackish water. Conclusions Our results indicate that herbaceous marsh species can suppress mangrove early seedling growth. Depending on species composition and density, marsh plants can slow mangrove landward migration under predicted climate change scenarios as salinity in freshwater and oligohaline wetlands increases with rising sea levels. Change in the relative coverage of mangrove forests and marshes will depend on both the ability of marsh species to migrate further inland as mangroves advance, and the ability of shoreline mangroves to adjust to rising sea level through accretionary processes.

Journal of Vegetation Science↗

USGS2019

Pecos River Basin salinity assessment, Santa Rosa Lake, New Mexico, to the confluence of the Pecos River and the Rio Grande, Texas, 2015

The elevated salinity of the Pecos River throughout much of its length is of paramount concern to water users and water managers. Dissolved-solids concentrations in the Pecos River exceed 3,000 milligrams per liter in many of its reaches in the study area, from Santa Rosa Lake, New Mexico, to the confluence of the Pecos River with the Rio Grande, Texas. The salinity of the Pecos River increases downstream and affects the availability of useable water in the Pecos River Basin. In this report, “salinity” and “dissolved-solids concentration” are considered synonymous; both terms are used to refer to the total ionic concentration of dissolved minerals in water. The sources of salinity in the Pecos River Basin are natural (geologic) and anthropogenic, including but not limited to groundwater discharge, springs, and irrigation return flows. Previous studies in the Pecos River Basin were project specific and designed to address salinity issues in specific parts of the basin; therefore, in 2015, the U.S. Geological Survey in cooperation with the U.S. Army Corps of Engineers, New Mexico Interstate Stream Commission, Texas Commission on Environmental Quality, and Texas Water Development Board assessed the major sources of salinity throughout the extent of the basin where elevated salinity in the Pecos River is well documented (that is, in the drainage area of the Pecos River from Santa Rosa Lake to the confluence of the Pecos River and the Rio Grande). The goal was to gain a better understanding of how specific areas might be contributing to the elevated salinity in the Pecos River and how salinity of the Pecos River has changed over time. This assessment includes a literature review and compilation of previously published salinity-related data, which guided the collection of additional water-quality samples and streamflow gain-loss measurements. Differences in water quality of surface-water and groundwater samples, streamflow measurements, and geophysical data were assessed to gain new insights regarding sources of salinity in the Pecos River Basin and a more detailed assessment of potential areas of elevated salinity in the basin. The datasets compiled for this assessment are available in a companion data release. The literature review identified several potential sources of salinity inputs to the Pecos River in New Mexico and Texas. In New Mexico, sources of salinity inputs included sinkhole springs discharging into El Rito Creek, the Bitter Lake National Wildlife Refuge inflow to the Pecos River, inflow from the Rio Hondo, including the main channel and a restored channel at the Bitter Lake National Wildlife Refuge referred to as the “Rio Hondo spring channel,” the outflow from Lea Lake at Bottomless Lakes State Park, and the Malaga Bend region of the Pecos River. In Texas, sources of salinity inputs included Salt Creek downstream from Red Bluff Reservoir and the area near the Horsehead Crossing ford on the Pecos River. The compilation of historical water-quality data revealed a lack of consistent sampling of the same constituents at the same sites along the main stem of the Pecos River, which results in data gaps that hinder the ability to effectively analyze long-term changes in water quality that may help with the understanding of how salinity in the Pecos River has changed over time and identifying the sources of salinity in the Pecos River Basin. To help fill these data gaps, water-quality and streamflow data were collected in the study area in February 2015 by the U.S. Geological Survey. Historical water-quality data and newly collected data from February 2015 were evaluated for selected major-ion concentrations, dissolved-solids concentrations, and deuterium, oxygen, and strontium isotopes. Analysis of the data indicated several areas of increasing salinity in the Pecos River. Most notable increases were in two subreaches of the river, between Acme, N. Mex., and Artesia, N. Mex., and between Orla, Tex., and Grandfalls, Tex. Increasing sodium and chloride concentrations from Acme to Artesia coincided with changes in isotopic ratios within the Pecos River Basin. Changes in isotopic ratios in this reach indicate a likely inflow from an isotopically different source of water compared to the water in the main stem of the Pecos River, such as groundwater inflow, inflow from surface-water features distinct from the main stem of the Pecos River, or both. In the subreach between Orla and Grandfalls, an increase in dissolved-solids concentrations was observed along with a shift in isotope values, indicating that neither evaporative processes in Red Bluff Reservoir nor inflow from Salt Creek likely solely influences the salinity of the Pecos River in this subreach. The highest dissolved-solids concentrations in the Pecos River Basin were measured downstream from Grandfalls, where dissolved-solids concentrations are greater than 16,000 milligrams per liter near Iraan, Tex. Changes in isotopic values (deuterium, oxygen, and strontium) indicate mixing of different waters at several areas along the main stem of the Pecos River. The spatial distribution of the areas of interest from the literature review and the water-quality data are available in the companion data release.

Texas, New Mexico↗

USGS1996

South Florida wetlands ecosystem; biogeochemical processes in peat

The South Florida wetlands ecosystem is an environment of great size and ecological diversity (figs. 1 and 2). The landscape diversity and subtropical setting of this ecosystem provide a habitat for an abundance of plants and wildlife, some of which are unique to South Florida. South Florida wetlands are currently in crisis, however, due to the combined effects of agriculture, urbanization, and nearly 100 years of water management. Serious problems facing this ecosystem include (1) phosphorus contamination producing nutrient enrichment, which is causing changes in the native vegetation, (2) methylmercury contamination of fish and other wildlife, which poses a potential threat to human health, (3) changes in the natural flow of water in the region, resulting in more frequent drying of wetlands, loss of organic soils, and a reduction in freshwater flow to Florida Bay, (4) hypersalinity, massive algal blooms, and seagrass loss in parts of Florida Bay, and (5) a decrease in wildlife populations, especially those of wading birds. This U.S. Geological Survey (USGS) project focuses on the role of organic-rich sediments (peat) of South Florida wetlands in regulating the concentrations and impact of important chemical species in the environment. The cycling of carbon, nitrogen, phosphorus, and sulfur in peat is an important factor in the regulation of water quality in the South Florida wetlands ecosystem. These elements are central to many of the contamination issues facing South Florida wetlands, such as nutrient enrichment, mercury toxicity, and loss of peat. Many important chemical and biological reactions occur in peat and control the fate of chemical species in wetlands. Wetland scientists often refer to these reactions as biogeochemical processes, because they are chemical reactions usually mediated by microorganisms in a geological environment. An understanding of the biogeochemical processes in peat of South Florida wetlands will provide a basis for evaluating the effects on water quality of (1) constructing buffer wetlands to alleviate nutrient contamination and (2) replumbing the ecosystem to restore natural water flow. The results may also suggest new approaches for solving problems of contamination and water quality in these wetlands. A second focus of this project will be on the geochemical history of the South Florida ecosystem. Peat is a repository of the history of past environmental conditions in the wetland. Before effective action can be taken to correct many of the problems facing these wetlands, we must first study the biogeochemistry of the peat at depth in order to understand whether current problems are the result of recent human activity or are part of a long-term natural cycle. Coordination with other (USGS) projects for South Florida is ongoing. These projects are studying the biological history of the ecosystem by using pollen and shells buried in the peat, together with procedures for dating the peat at various depths, to develop an overall ecosystem history model, with emphasis on the last 100 years.

Fact Sheet↗

USGS2012

Biological assessment of environmental flows for Oklahoma

Large-scale patterns in fish assemblage structure and functional groups are influenced by alterations in streamflow regime. In this study, we defined an objective threshold for alteration for Oklahoma streams using a combination of the expected range of 27 flow indices and a discriminant analysis to predict flow regime group. We found that fish functional groups in reference flow conditions had species that were more intolerant to flow alterations and preferences for stream habitat and faster flowing water. In contrast, altered sites had more tolerant species that preferred lentic habitat and slower water velocity. Ordination graphs of the presence and functional groups of species revealed an underlying geographical pattern roughly conforming to ecoregions, although there was separation between reference and altered sites within the larger geographical framework. Additionally, we found that reservoir construction and operation significantly altered fish assemblages in two different systems, Bird Creek in central Oklahoma and the Kiamichi River in southeastern Oklahoma. The Bird Creek flow regime shifted from a historically intermittent stream to one with stable perennial flows, and changes in fish assemblage structure covaried with changes in all five components of the flow regime. In contrast, the Kiamichi River flow regime did not change significantly for most flow components despite shifts in fish assemblage structure; however, most of the species associated with shifts in assemblage structure in the Kiamichi River system were characteristic of lentic environments and were likely related more to proximity of reservoirs in the drainage system than changes in flow. The spatial patterns in fish assemblage response to flow alteration, combined with different temporal responses of hydrology and fish assemblage structure at sites downstream of reservoirs, indicate that interactions between flow regime and aquatic biota vary depending on ecological setting. This supports the notion that regional variation in natural flow regimes could affect the development of flow recommendations.

Oklahoma↗

USGS2021

Is the grass always greener? Land surface phenology reveals differences in peak and season-long vegetation productivity responses to climate and management

Vegetation phenology—the seasonal timing and duration of vegetative phases—is controlled by spatiotemporally variable contributions of climatic and environmental factors plus additional potential influence from human management. We used land surface phenology derived from the Advanced Very High Resolution Radiometer and climate data to examine variability in vegetation productivity and phenological dates from 1989 to 2014 in the U.S. Northwestern Plains, a region with notable spatial heterogeneity in climate, vegetation, and land use. We first analyzed interannual trends in six phenological measures as a baseline. We then demonstrated how including annual-resolution predictors can provide more nuanced insights into measures of phenology between plant communities and across the ecoregion. Across the study area, higher annual precipitation increased both peak and season-long productivity. In contrast, higher mean annual temperatures tended to increase peak productivity but for the majority of the study area decreased season-long productivity. Annual precipitation and temperature had strong explanatory power for productivity-related phenology measures but predicted date-based measures poorly. We found that relationships between climate and phenology varied across the region and among plant communities and that factors such as recovery from disturbance and anthropogenic management also contributed in certain regions. In sum, phenological measures did not respond ubiquitously nor covary in their responses. Nonclimatic dynamics can decouple phenology from climate; therefore, analyses including only interannual trends should not assume climate alone drives patterns. For example, models of areas exhibiting greening or browning should account for climate, anthropogenic influence, and natural disturbances. Investigating multiple aspects of phenology to describe growing-season dynamics provides a richer understanding of spatiotemporal patterns that can be used for predicting ecosystem responses to future climates and land-use change. Such understanding allows for clearer interpretation of results for conservation, wildlife, and land management.

Ecology and Evolution↗

USGS2015

Using satellite images to monitor glacial-lake outburst floods: Lago Cachet Dos drainage, Chile

The U.S. Geological Survey (USGS) is monitoring and analyzing glacial-lake outburst floods (GLOFs) in the Colonia valley in the Patagonia region of southern Chile. A GLOF is a type of flood that occurs when water impounded by a glacier or a glacial moraine is released catastrophically. In the Colonia valley, GLOFs originating from Lago Cachet Dos, which is dammed by the Colonia Glacier, have recurred periodically since 2008. The water discharged during these GLOFs flows under or through the Colonia Glacier, into Lago Colonia and then the Río Colonia, and finally into the Río Baker—Chile's largest river in terms of volume of water. This report presents a GeoEye-1 image collected December 1, 2011 and a WorldView-2 image collected September 27, 2013. The 2011 image shows Lago Cachet Dos when the water level was near its maximum extent. The 2013 image shows the drained lake four days after a GLOF event. The images were used to delineate the differences in water surface area prior to, and immediately following, a GLOF event. The imagery shown here highlights the dramatic changes that typically occur during GLOFs from Lago Cachet Dos. The lake area decreased from 4.84 km 2 in 2011 (pre-GLOF) to only 0.30 km 2 in September 2013 (post-GLOF). The water surface lowered approximately 90 m between the pre- and post-GLOF satellite images, yielding a change in volume of approximately 217,000,000 m 3 ; this value is similar to previous estimates (about 200 million m 3 ) of the volume of flood water that flowed down the Río Colonia during some previous GLOFs. During 2008–2013, 14 GLOFs were released from Lago Cachet Dos and created environmental and safety concerns for downstream residents and to infrastructure. If GLOFs and the consequent headward erosion continue, the moraine that creates Lago Cachet Uno could be destabilized and breached, and the two lakes could merge. If the two lakes become connected, the volume of future GLOFs likely would be greater and thus cause longer and (or) more extensive flooding downstream. Additional GLOFs from Lago Cachet Dos are expected in the future, and continued environmental monitoring could provide an early warning system as well as scientific information that could increase our understanding of GLOFs and their consequences. GLOFs occur in glaciated areas around the world and remote sensing technologies can allow researchers to better understand—and potentially predict—future GLOF events.

Colonia valley, Lago Cachet Dos, Patagonia↗

USGS2022

Ecologically relevant moisture and temperature metrics for assessing dryland ecosystem dynamics

In drylands, water-limited regions that cover ~40% of the global land surface, ecosystems are primarily controlled by access to soil moisture and exposure to simultaneously hot and dry conditions. Quantifying ecologically relevant environmental metrics is difficult in drylands because the response of vegetation to moisture and temperature conditions is not easily explained solely by climate-based metrics. To address this knowledge gap, we developed and examined 27 climate and ecological drought metrics across dryland areas of the western U.S. Included in the 27 metrics is a suite of 19 largely new “ecological drought metrics” that are designed to quantify multiple aspects of environmental limitation in drylands, including overall growing conditions, seasonal fluctuations, seasonal moisture timing, exposure to extreme drought, and recruitment potential for perennial plants. To quantify these metrics, we simulated water balance pools and fluxes of daily soil moisture at multiple depths with historical weather from 1970-2010 using the SOILWAT2 ecosystem water balance model. We assessed the relationships among these metrics and their spatial and temporal patterns. We found that the inclusion of ecological drought metrics substantially increased the dimensionality of the climate metrics dataset; the number of independent variables needed to explain 90% of the variance in the dataset increased with the addition of ecological drought metrics. Spatial patterns in overall growing conditions represented well-known differences among ecoregions, for example high temperatures and low precipitation in the southwest and cool temperatures and greater precipitation in the northeast. Seasonal fluctuation in soil water availability (SWA) was greatest in the southwest (Mojave Desert) while fluctuation in climatic water deficit (CWD) was greatest in the northwest (northern Great Basin and Columbia Plateau). Seasonal timing of moisture also differed among metrics; the timing of wet degree days (WDD), SWA and CWD were only weakly related to seasonal timing of precipitation. Plant recruitment metrics varied strongly across western drylands. In the Great Plains, recruitment events occurred more frequently and lasted longer than in the intermountain regions, where recruitment events were comparatively rare and short. These ecological drought metrics provide new insight into patterns of soil moisture and temperature that shape the structure and function of dryland ecosystems. The metrics will be useful for assessing the potential impact of climate change on dryland ecosystems and developing adaptive resource management strategies to sustain dryland ecosystem services in a changing world.

Ecohydrology↗